RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAN2A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000196547

Ensembl transcript IDs: ENST00000360468.7, ENST00000557865.5, ENST00000557990.1, ENST00000558161.5, ENST00000558171.1, ENST00000558290.5, ENST00000558374.5, ENST00000558640.5, ENST00000558853.5, ENST00000559132.3, ENST00000559341.5, ENST00000559374.1, ENST00000559558.1, ENST00000559704.1, ENST00000559717.6, ENST00000559965.5, ENST00000559999.5, ENST00000560192.5, ENST00000560451.5, ENST00000560505.1, ENST00000560534.2, ENST00000560616.5, ENST00000560880.1, ENST00000560926.5, ENST00000561046.1, ENST00000561047.1, ENST00000561240.1, ENST00000561448.5

Found 1403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGAGGATGAAATGAGCGCAGACCAGGGCCTGGGAGCTGCATCCTaGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGG +
Preference number: 1 (lower is better)
Translates to: PEDEMSADQGLGAAS*LQAERAPGRSGTWR
Trigger: CCTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CCA 90 bp CGCCGGGGCGTTCAGGTACATGGAGGTCAGGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCTATCTTGGACCTCACTGCCCACGGT +
Preference number: 1 (lower is better)
Translates to: RRGVQVHGGQVAEEG*VAGRVAILDLTAHG
Trigger: ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCATGTACCTGAACGCCCCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 90 bp GCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGTTGTCCTTaGGCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCC +
Preference number: 1 (lower is better)
Translates to: ALAGGGNGCRFSCCP*ALGLGPGCHPASAA
Trigger: GGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 90 bp CCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGTTaGGCAGGTGGAAGTCACAGGGCAGTGAGGAAGCCAGAGGATGAA +
Preference number: 1 (lower is better)
Translates to: PPRVGCPPQPGAYVG*AGGSHRAVRKPEDE
Trigger: TTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTCCACCTGCTCAACCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 90 bp AGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTTGCGGTGTAAGATaGGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGA +
Preference number: 1 (lower is better)
Translates to: SSWPPGRSQNPCGVR*VRSPPRVGCPPQPG
Trigger: TCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACTCATCTTACACCGCAAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR GCA 90 bp AGAGACACCCAGGGCCTGGGCAGTGTGCAGCGTGAGGCGCTTCTGTaGGTCCTGGATATAGGCCATGACTGGCATGGGGTAGAAGTTGGC +
Preference number: 1 (lower is better)
Translates to: RDTQGLGSVQREALL*VLDIGHDWHGVEVG
Trigger: GCCAACTTCTACCCCATGCCAGTCATGGCCTATATCCAGGACGCACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCTGGGTGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR CCA 90 bp AGGAGGCGGAAACGGTTGCAGGTTCTCTTGTTGTCCTTGAGCCCTTaGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAG +
Preference number: 1 (lower is better)
Translates to: RRRKRLQVLLLSLSP*PRPRLSSCISRRSK
Trigger: CTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 90 bp CTGTCTGACCCCCTCCAGGTCACACTGAGTGAGGTAATGGTGGCGTaGGAATCCTCTGGGAATCTGGCAGGATCACCCCCGAGCAGTCCA +
Preference number: 1 (lower is better)
Translates to: LSDPLQVTLSEVMVA*ESSGNLAGSPPSSP
Trigger: TGGACTGCTCGGGGGTGATCCTGCCAGATTCCCAGAGGATTCTCACGCCACCATTACCTCACTCAGTGTGACCTGGAGGGGGTCAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR TCA 90 bp AGGTTGAGCAGGTGGAAGTCACAGGGCAGTGAGGAAGCCAGAGGATaGAATGAGCGCAGACCAGGGCCTGGGAGCTGCATCCTGGCTACA +
Preference number: 1 (lower is better)
Translates to: RLSRWKSQGSEEARG*NERRPGPGSCILAT
Trigger: TGTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTCCACCTGCTCAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 90 bp TTGGACGGGGAGGCCAGAGGGTACAGTAACGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGGCCATGGAAAAGGCTGCCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: LDGEARGYSNVKEVG*RNTTSRPWKRLPRA
Trigger: AGCCCTGGGCAGCCTTTTCCATGGCCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTACTGTACCCTCTGGCCTCCCCGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 90 bp CAGGGCCAGCTCCTTGTTGACGTAGTCCCGGATGTCCACCAGGGATaGTATGTCCAGAGACAGCCCCTCCACCCCTGGCAGATTGTAAAG +
Preference number: 1 (lower is better)
Translates to: QGQLLVDVVPDVHQG*YVQRQPLHPWQIVK
Trigger: CTTTACAATCTGCCAGGGGTGGAGGGGCTGTCTCTGGACATATCATCCCTGGTGGACATCCGGGACTACGTCAACAAGGAGCTGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR CCA 90 bp GTGCAGCGTGAGGCGCTTCTGTGCGTCCTGGATATAGGCCATGACTaGCATGGGGTAGAAGTTGGCCTGGAGGGGGAGCTTCTTCAGATA +
Preference number: 1 (lower is better)
Translates to: VQREALLCVLDIGHD*HGVEVGLEGELLQI
Trigger: TATCTGAAGAAGCTCCCCCTCCAGGCCAACTTCTACCCCATGCCAGTCATGGCCTATATCCAGGACGCACAGAAGCGCCTCACGCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR GCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTaGCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACA +
Preference number: 1 (lower is better)
Translates to: AHSDQGPSLPDLTGV*PIYPSLGLWVAPKT
Trigger: TGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR TCA 90 bp CCTGGCTGTCGATGTCTGTATGGATGTGCAGGGCCAGCTCCTTGTTaGCGTAGTCCCGGATGTCCACCAGGGATGATATGTCCAGAGACA +
Preference number: 1 (lower is better)
Translates to: PGCRCLYGCAGPAPC*RSPGCPPGMICPET
Trigger: TGTCTCTGGACATATCATCCCTGGTGGACATCCGGGACTACGTCAACAAGGAGCTGGCCCTGCACATCCATACAGACATCGACAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR CCA 90 bp GAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGC +
Preference number: 1 (lower is better)
Translates to: EGRAQCVTVLGGRSG*DTRVACPMIFMLRG
Trigger: GCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR GCA 90 bp CACTTCTATATCCCTGTTTGGAAAAAGGATGGGTGCCTGAGCCTGTaGCCAGTTGGGTGTCCACTCACAACCCAAAGCAGAGCCTGGCAC +
Preference number: 1 (lower is better)
Translates to: HFYIPVWKKDGCLSL*PVGCPLTTQSRAWH
Trigger: GTGCCAGGCTCTGCTTTGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTTTCCAAACAGGGATATAGAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 90 bp CGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTaGAGGCTTTCCTTTCCAGAGAAAGAAAGTAGGACCAATCCCCAC +
Preference number: 1 (lower is better)
Translates to: RGAERLLKLPKHMES*RLSFPEKESRTNPH
Trigger: GTGGGGATTGGTCCTACTTTCTTTCTCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTaGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAG +
Preference number: 1 (lower is better)
Translates to: LLSLISLASALFTHH*VCGLRRKHSSSNKQ
Trigger: CTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 90 bp GTTCCACTGTGTGGCCTAATACGGGCAGCAACAACTCTGATGACCTaGAAGAACTCAGCCCTCTCACTCTTGTCTTTAGGTGGCAGCTTG +
Preference number: 1 (lower is better)
Translates to: VPLCGLIRAATTLMT*KNSALSLLSLGGSL
Trigger: CAAGCTGCCACCTAAAGACAAGAGTGAGAGGGCTGAGTTCTTCCAGGTCATCAGAGTTGTTGCTGCCCGTATTAGGCCACACAGTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR GCA 90 bp GGCTTTCCTTTCCAGAGAAAGAAAGTAGGACCAATCCCCACTCCCTaGCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCA +
Preference number: 1 (lower is better)
Translates to: GFPFQRKKVGPIPTP*HNKKEPLGTAAYRA
Trigger: TGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCCTACTTTCTTTCTCTGGAAAGGAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 90 bp ATGGGAATGCCTGTGGCGTCTGACTCTTTAGAATGCCATCACTGTTaGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAG +
Preference number: 1 (lower is better)
Translates to: MGMPVASDSLECHHC*FPCGLSNDLHVKRQ
Trigger: CTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAACAGTGATGGCATTCTAAAGAGTCAGACGCCACAGGCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559704.1
3UTR CCA 90 bp ATTTGGGGAAAACCAGTATGTGGACAGGAACATGATGTGTATCATTaGGTTGACTTACAGAATACTCTTAACAGGTCTTCAGTTGATTCT +
Preference number: 1 (lower is better)
Translates to: IWGKPVCGQEHDVYH*VDLQNTLNRSSVDS
Trigger: AGAATCAACTGAAGACCTGTTAAGAGTATTCTGTAAGTCAACCCAATGATACACATCATGTTCCTGTCCACATACTGGTTTTCCCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR TCA 90 bp TTTAGAACTGTCAATTCCAAAGTTTCAATCTCATTGGAATTACACTaGATTTATCAGCTGATTTGGGGAAAACCAGTATGTGGACAGGAA +
Preference number: 1 (lower is better)
Translates to: FRTVNSKVSISLELH*IYQLIWGKPVCGQE
Trigger: TTCCTGTCCACATACTGGTTTTCCCCAAATCAGCTGATAAATTCAGTGTAATTCCAATGAGATTGAAACTTTGGAATTGACAGTTCTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR-3UTR CCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAGCGCAGACCAGGGCCTaGGAGCTGCATCCTGGCTAC +
Preference number: 2 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSAQTRA*ELHPGY
Trigger: GTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGC...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 90 bp ACCTCACTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCCTTGAGCCCTTGGCCTAGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: TSLPTVRRSSRRRKR*QVLLLSLSPWPRPR
Trigger: CCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAGTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAAGCCAGAGGATGAAATaGGCGCAGACCAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSSQRMK*AQTRAW
Trigger: CCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCT...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR GCA 90 bp AGGGCCTGGGAGCTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGACTGGGTTTGTGGGTTaGGCCGAAAACACAGCAGCA +
Preference number: 2 (lower is better)
Translates to: RAWELHPGYRQSERRGVQTGFVG*AENTAA
Trigger: TGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGT...CTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp ATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGGTCAGGGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: ILATGRASAGAFRYMEVRGGRSG*DTRVAC
Trigger: ACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC...CCTGACCTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCGAGCCTGTGCCCAGTTaGGTGTCCACTCACAACCCA +
Preference number: 2 (lower is better)
Translates to: PRPRLSSCISRRSKITSSEPVPS*VSTHNP
Trigger: TGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTC...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp ACACCCAGGGCCTGGGCAGTGTGCAGCGTGAGGCGCTTCTGTGCGTCCTGGATAGCATGGGGTAGAAGTTaGCCTGGAGGGGGAGCTTCT +
Preference number: 2 (lower is better)
Translates to: TPRAWAVCSVRRFCASWIAWGRS*PGGGAS
Trigger: AGAAGCTCCCCCTCCAGGCCAACTTCTACCCCATGC...TATCCAGGACGCACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCTGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR CAA 90 bp CGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGTTGTCCTaGAGCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGC +
Preference number: 2 (lower is better)
Translates to: RSSRRRKRLQVLLLS*SPWPRPRLSSCISR
Trigger: GCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 90 bp ACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTaGTTGTCCTTGAGCCCTTGGCCTAGGCCCCGGTTGTCATCCTGC +
Preference number: 2 (lower is better)
Translates to: TVRRSSRRRKRLQVL*LSLSPWPRPRLSSC
Trigger: GCAGGATGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGAAAAGGATGGGTGCCTaGGCCTGTGCCCAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPKRMGA*ACAQLG
Trigger: ACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTT...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGTGGAGGTCAGGTGGCTaGGGAGGGATGGGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: VRLQGLPARRGAERLLKLWRSGG*GGMGSW
Trigger: CCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCA...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR GCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCACCAGGGCCTGGGAGCTaGATCCTGGCTACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SQREFRQGEGPHTPATIPPGPGS*ILATGR
Trigger: TCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGG...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 2 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSSVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGGCGCAGACCAGGGCCTaGGAGCTGCATCCTGGCTAC +
Preference number: 2 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGAQTRA*ELHPGY
Trigger: GTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGC...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp CCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCTGGGGACGTAGGGCTTaGCCTCGCCATCGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: PQEALTQAEAKGSNLHGLWGRRA*PRHRAG
Trigger: TCCTGCCCGATGGCGAGGCCAAGCCCTACGTCCCCA...GAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR CAA 90 bp GTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGTaGTCCTTGAGCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATC +
Preference number: 2 (lower is better)
Translates to: VRRSSRRRKRLQVLL*SLSPWPRPRLSSCI
Trigger: GATGCAGGATGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 90 bp CAGTTGAAGCCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTaGCGGTGTAAGATGAGTGCGGTCTCCGCCGAGGGTAGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: QLKPKFLASRPQSKP*RCKMSAVSAEGRVS
Trigger: GGACACCCTACCCTCGGCGGAGACCGCACTCATCTTACACCGCAAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp CTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGAAAAGGATGGGTGCCTaGGCCTGTGCCCAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: LPARRGAERLLKLPKHMEKRMGA*ACAQLG
Trigger: ACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTT...CTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCAGCCTGTTAGCCAATaGATGCAGGCCAGGCGGCAC +
Preference number: 2 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSQPVSQ*MQARRH
Trigger: GTGCCGCCTGGCCTGCATGCATTGGCTAACAGGCTG...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTCCCCGGTTGTCATCCTaGATCAGCCGCCGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: PTLTKGLLSLISLASALFPRLSS*ISRRSK
Trigger: CTTGGACCGGCGGCTGATGCAGGATGACAACCGGGG...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR GCA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCCCCGGTTGTCATCCTaGATCAGCCGCCGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGPRLSS*ISRRSK
Trigger: CTTGGACCGGCGGCTGATGCAGGATGACAACCGGGG...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGAGCCTGTGCCCAGTTaGGTGTCCACTCACAACCCA +
Preference number: 2 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTREPVPS*VSTHNP
Trigger: TGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTC...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCAGGGTGCCTGAGCCTGTaGCCAGTTGGGTGTCCACTC +
Preference number: 2 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAGCLSL*PVGCPL
Trigger: GAGTGGACACCCAACTGGGCACAGGCTCAGGCACCC...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGCAGCCTGTTAGCCAATaGATGCAGGCCAGGCGGCAC +
Preference number: 2 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGQPVSQ*MQARRH
Trigger: GTGCCGCCTGGCCTGCATGCATTGGCTAACAGGCTG...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTAGGACCCCACACCCCTaGCACCATCCCACAAATCAG +
Preference number: 2 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSRTPHP*HHPTNQ
Trigger: CTGATTTGTGGGATGGTGGCAGGGGTGTGGGGTCCT...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGCTTTGGACGTACGGGTaGCATAGACAAGGACCTGCA +
Preference number: 2 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPLWTYG*HRQGPA
Trigger: TGCAGGTCCTTGTCTATGGCACCCGTACGTCCAAAG...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR-3UTR CCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIGGRSG*DTRVAC
Trigger: ACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp CAATCTCCATGGGCTCCAAATAGACGTCAGTGCTGTTGGACGGGGAGGCCAGAGAGACGTCAGTGCTGTTaGACGGGGAGGCCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: QSPWAPNRRQCCWTGRPERRQCC*TGRPEG
Trigger: ACCCTCTGGCCTCCCCGTCCAACAGCACTGACGTCT...CTCTGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGGAGCCCATGGAGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAGATATAGGCCATGACTaGCATGGGGTAGAAGTTGGC +
Preference number: 2 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSDIGHD*HGVEVG
Trigger: GCCAACTTCTACCCCATGCCAGTCATGGCCTATATC...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR-3UTR TCA 90 bp CAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCCAAATAGACGTCAGTGCTTGGCACTGCCCACTCTaGCCAAGGGCCTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: QAEAKGSNLHGLQIDVSAWHCPL*PRAFSP
Trigger: GGGAGAGAAGGCCCTTGGTCAGAGTGGGCAGTGCCA...AGCACTGACGTCTATTTGGAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGGAGGAAGCCAGAGGATaGAATGAGCGCAGACCAGGG +
Preference number: 2 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGEEARG*NERRPG
Trigger: CCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTC...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGCCTTGCGGTGTAAGATaGGTGCGGTCTCCGCCGAGG +
Preference number: 2 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQPCGVR*VRSPPR
Trigger: CCTCGGCGGAGACCGCACTCATCTTACACCGCAAGG...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR GCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCCTGTTAGCCAATGCATaGAGGCCAGGCGGCACTTAC +
Preference number: 2 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSLLANA*RPGGTY
Trigger: GTAAGTGCCGCCTGGCCTGCATGCATTGGCTAACAG...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp CAATCTCCATGGGCTCCAAATAGACGTCAGTGCTGTTGGACGGGGAGGCCAGAGGCCAAGTGCCCAGTTTaGCAGGGGTCTTGCTACCTG +
Preference number: 2 (lower is better)
Translates to: QSPWAPNRRQCCWTGRPEAKCPV*QGSCYL
Trigger: CAGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGC...CTCTGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGGAGCCCATGGAGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: PTLTKGLLSLISLASALFGGRSG*DTRVAC
Trigger: ACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTAGAGTGGCTATCTTaGACCTCACTGCCCACGGTT +
Preference number: 2 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRVEWLS*TSLPTV
Trigger: AACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCT +
Preference number: 2 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGVAEEG*VAGRVA
Trigger: AGCCACTCTACCAGCTACCCATCCCTCCTCAGCCAC...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp CCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCT +
Preference number: 2 (lower is better)
Translates to: PQEALTQAEAKGSNLHGLVAEEG*VAGRVA
Trigger: AGCCACTCTACCAGCTACCCATCCCTCCTCAGCCAC...GAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGGTGTCCTCCTCAGCCTaGAGCGTACGTAGGTTGAGC +
Preference number: 2 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGVSSSA*SVRRLS
Trigger: GCTCAACCTACGTACGCTCCAGGCTGAGGAGGACAC...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 90 bp TGCTGTTGGACGGGGAGGCCAGAGGGTACAGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACATCCAGGCCATGGAAAAGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: CCWTGRPEGTVTSRR*AEGIPHPGHGKGCP
Trigger: TGGGCAGCCTTTTCCATGGCCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTACTGTACCCTCTGGCCTCCCCGTCCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp GTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTTCGCCGCTCTAGCAGGAGGGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: VEWLSWTSLPTVRRSSRRGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...CCTCCTGCTAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGGTACGCAACCACCTCTaGGAAGAAAGGGCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: VRLQGLPARRGAERLLKLVRNHL*EERAFS
Trigger: ACTGAAGGCCCTTTCTTCTCAGAGGTGGTTGCGTAC...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR-3UTR GCA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATCAGCCTGTTAGCCAATaGATGCAGGCCAGGCGGCAC +
Preference number: 2 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHQPVSQ*MQARRH
Trigger: GTGCCGCCTGGCCTGCATGCATTGGCTAACAGGCTG...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGTATCTTGGACCTCACTaGCCACGGTTCGCCGCTCTA +
Preference number: 2 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPYLGPH*PRFAAL
Trigger: TAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATA...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR GCA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGTATCTTGGACCTCACTaGCCACGGTTCGCCGCTCTA +
Preference number: 2 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGYLGPH*PRFAAL
Trigger: TAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATA...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 2 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPSVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCATCACTGGGTTTGTaGGTTGCGCCGAAAACACAG +
Preference number: 2 (lower is better)
Translates to: VRLQGLPARRGAERLLKLPSLGL*VAPKTQ
Trigger: CTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGG...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCAAGCTGCCCAAGCACATaGAGTCTTGGAGGCTTTCCT +
Preference number: 2 (lower is better)
Translates to: SQREFRQGEGPHTPATIPSCPST*SLGGFP
Trigger: AGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCT...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCAGCCCCTCCACCCCTaGCAGATTGTAAAGCCGGAC +
Preference number: 2 (lower is better)
Translates to: AERLLKLPKHMESWRLSFQPLHP*QIVKPD
Trigger: GTCCGGCTTTACAATCTGCCAGGGGTGGAGGGGCTG...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR CAA 90 bp AGGGCTACCTTGCCTTGGCTTGTGGTGCAGTTGAAGCCCAAGTTCTaGGCCTCCAGGCCGCAGTCAAAACCCTTGCGGTGTAAGATGAGT +
Preference number: 2 (lower is better)
Translates to: RATLPWLVVQLKPKF*ASRPQSKPLRCKMS
Trigger: ACTCATCTTACACCGCAAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: HAGQAALTAKPSQKAARPGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTAAAAGGATGGGTGCCTaGGCCTGTGCCCAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: AERLLKLPKHMESWRLSFKRMGA*ACAQLG
Trigger: ACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTT...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCTGGAGGTCAGGTGGCTaGGGAGGGATGGGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCWRSGG*GGMGSW
Trigger: CCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCA...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAGGAAGCCAGAGGATaGAATGAGCGCAGACCAGGG +
Preference number: 2 (lower is better)
Translates to: GTYCKAITESSEAFRLLGEEARG*NERRPG
Trigger: CCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTC...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp TGTGGTGCAGTTGAAGCCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTTGATGTCCACCAGGGATaGTATGTCCAGAGACAGCCC +
Preference number: 2 (lower is better)
Translates to: CGAVEAQVLGLQAAVKTLDVHQG*YVQRQP
Trigger: GGGCTGTCTCTGGACATATCATCCCTGGTGGACATC...AAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR-3UTR GCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGACTGGGTTTGTGGGTTaGGCCGAAAACACAGCAGCA +
Preference number: 2 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGTGFVG*AENTAA
Trigger: TGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGT...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCAGATTCCCCTAGAGCCTaGTGTTGCCACAGTGACCCT +
Preference number: 2 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAADSPRA*CCHSDP
Trigger: AGGGTCACTGTGGCAACAGCAGGCTCTAGGGGAATC...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGGCCAAGTGCCCAGTTTaGCAGGGGTCTTGCTACCTG +
Preference number: 2 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQAKCPV*QGSCYL
Trigger: CAGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGC...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGTGCCCAGGGCTACCTTaGCTTGGCTTGTGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQCPGLP*LGLWCS
Trigger: ACTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCA...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTGGRSG*DTRVAC
Trigger: ACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGTGTTTGGAAAAAGGATaGGTGCCTGAGCCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGCLEKG*VPEPVP
Trigger: GGGCACAGGCTCAGGCACCCATCCTTTTTCCAAACA...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAACTGGGAGCTGCATCCTaGCTACAGGCAGAGCGAGCG +
Preference number: 2 (lower is better)
Translates to: TYCKAITESSEAFRLLGELGAAS*LQAERA
Trigger: CGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAG...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 90 bp CCCTGCCACCATCCCACAAATCAGTACATAGGCCAAGTGCCCAGTTaGCCAGGGGTCTTGCTACCTGAAGTGACCTATGATCTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: PCHHPTNQYIGQVPS*PGVLLPEVTYDLWP
Trigger: TGGCCAGAGATCATAGGTCACTTCAGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGCCTATGTACTGATTTGTGGGATGGTGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCTCCCAGAGTCACTCTaGTCCTGCTCATCACACCAG +
Preference number: 2 (lower is better)
Translates to: AERLLKLPKHMESWRLSFLPESL*SCSSHQ
Trigger: CTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAG...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp TGTGGTGCAGTTGAAGCCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTTGAAGTCACAGGGCAGTaGGGAAGCCAGAGGATGAAA +
Preference number: 2 (lower is better)
Translates to: CGAVEAQVLGLQAAVKTLEVTGQ*GSQRMK
Trigger: TTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTC...AAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAAGGCTTGTGGTGCAGTTaGAGCCCAAGTTCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: ADRLKVRLQGLPARRGAEGLWCS*SPSSWP
Trigger: AGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCC...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR GCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTAGGACCCCACACCCCTaGCACCATCCCACAAATCAG +
Preference number: 2 (lower is better)
Translates to: LLSLISLASALFTHHWVCRTPHP*HHPTNQ
Trigger: CTGATTTGTGGGATGGTGGCAGGGGTGTGGGGTCCT...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCTGCACAGCCATACTaGCTCCTCATATACTCTACA +
Preference number: 2 (lower is better)
Translates to: VRLQGLPARRGAERLLKLPAQPY*LLIYST
Trigger: TGTAGAGTATATGAGGAGGCAGTATGGCTGTGCAGG...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGGAGGCGGAAACGGTTaGAGGTTCTCTTGTTGTCCT +
Preference number: 2 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYGGGNG*RFSCCP
Trigger: AGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGAGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: PITGFVGCAENTAAAINRGGRSG*DTRVAC
Trigger: ACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 2 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQSVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTTGTCCTTGAGCCCTTaGCCTAGGCCCCGGTTGTCA +
Preference number: 2 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSLSLSP*PRPRLS
Trigger: TGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATCGTAGGTTGAGCAGGTaGAAGTCACAGGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHRRLSR*KSQGSE
Trigger: CTCACTGCCCTGTGACTTCCACCTGCTCAACCTACG...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: HWRLPYLPITGFVGCAENGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGGCAATAAACAGAAAATaGGGGCAGAGCCCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPAINRK*GQSPVC
Trigger: ACACACTGGGCTCTGCCCTCATTTTCTGTTTATTGC...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGCAATAAACAGAAAATaGGGGCAGAGCCCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: PTLTKGLLSLISLASALFAINRK*GQSPVC
Trigger: ACACACTGGGCTCTGCCCTCATTTTCTGTTTATTGC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAGGCTTGTGGTGCAGTTaGAGCCCAAGTTCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGGLWCS*SPSSWP
Trigger: AGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCC...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR GCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTTGCCCAGGGCTACCTTaGCTTGGCTTGTGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSCPGLP*LGLWCS
Trigger: ACTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCA...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGAAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 2 (lower is better)
Translates to: PITGFVGCAENTAAAINRSVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAGAGCCTGTGCCCAGTTaGGTGTCCACTCACAACCCA +
Preference number: 2 (lower is better)
Translates to: TYCKAITESSEAFRLLGEEPVPS*VSTHNP
Trigger: TGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTC...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCTTATGTTCCTCATCTaGCTTGTTGCAGGGGTTAGT +
Preference number: 2 (lower is better)
Translates to: VRLQGLPARRGAERLLKLLMFLI*LVAGVS
Trigger: ACTAACCCCTGCAACAAGCCAGATGAGGAACATAAG...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCCTCCCAGAGTCACTCTaGTCCTGCTCATCACACCAG +
Preference number: 2 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCLPESL*SCSSHQ
Trigger: CTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAG...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
3UTR-3UTR TCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAAGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGG +
Preference number: 2 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQVKEVG*RNTTSR
Trigger: CCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGAC...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR GCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGATCTCACTGGCGTCTaGCCTATTTACCCATCACTG +
Preference number: 2 (lower is better)
Translates to: GTYCKAITESSEAFRLLGDLTGV*PIYPSL
Trigger: CAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCCTGTTAGCCAATGCATaGAGGCCAGGCGGCACTTAC +
Preference number: 2 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCLLANA*RPGGTY
Trigger: GTAAGTGCCGCCTGGCCTGCATGCATTGGCTAACAG...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCTGTTAGCCAATGCATaGAGGCCAGGCGGCACTTAC +
Preference number: 2 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRLLANA*RPGGTY
Trigger: GTAAGTGCCGCCTGGCCTGCATGCATTGGCTAACAG...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 2 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRSVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCTTCTATATCCCTGTTTaGAAAAAGGATGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: HRSQREFRQGEGPHTPATFYIPV*KKDGCL
Trigger: CAGGCACCCATCCTTTTTCCAAACAGGGATATAGAA...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACCTCCACTCTTGTCTTTaGACGTACGGGTGCCATAGA +
Preference number: 2 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHLHSCL*TYGCHR
Trigger: TCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAG...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR-3UTR TCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACGCAATAAACAGAAAATaGGGGCAGAGCCCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHAINRK*GQSPVC
Trigger: ACACACTGGGCTCTGCCCTCATTTTCTGTTTATTGC...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAAAAAGGATGGGTGCCTaGGCCTGTGCCCAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRKRMGA*ACAQLG
Trigger: ACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTT...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTTGGAAAAAGGATGGGTaGCTGAGCCTGTGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSWKKDG*LSLCPV
Trigger: AACTGGGCACAGGCTCAGGCACCCATCCTTTTTCCA...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCGGAGGCGGAAACGGTTaGAGGTTCTCTTGTTGTCCT +
Preference number: 2 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCGGGNG*RFSCCP
Trigger: AGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCC...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAACCATCACTGGGTTTGTaGGTTGCGCCGAAAACACAG +
Preference number: 2 (lower is better)
Translates to: TYCKAITESSEAFRLLGEPSLGL*VAPKTQ
Trigger: CTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGG...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTCGTAGGTTGAGCAGGTaGAAGTCACAGGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: ITESSEAFRLLGETVIPSRRLSR*KSQGSE
Trigger: CTCACTGCCCTGTGACTTCCACCTGCTCAACCTACG...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR TCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: LPITGFVGCAENTAAAINGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGATATGATCTCTGGCCATaGCAATCTCTAGCGAGTCCT +
Preference number: 2 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGYDLWP*QSLASP
Trigger: AGGACTCGCTAGAGATTGTCATGGCCAGAGATCATA...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGACCTAGAGCCTGCTGTTaGCACAGTGACCCTGATGCT +
Preference number: 2 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRPRACC*HSDPDA
Trigger: AGCATCAGGGTCACTGTGGCAACAGCAGGCTCTAGG...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCAACGCCTTCTCAAGCTaGCCAAGCACATGGAGTCTT +
Preference number: 2 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCNAFSS*PSTWSL
Trigger: AAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CAA 90 bp AAAGTAGGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTaGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAG +
Preference number: 2 (lower is better)
Translates to: KVGPIPTPCHNKKEP*GTAAYRAQKPKRIQ
Trigger: CTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCCTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR GCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCAGTGATTCCTTCTACTaGTCCATCCCCACTGCTAAC +
Preference number: 2 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCSDSFY*SIPTAN
Trigger: GTTAGCAGTGGGGATGGAGCAGTAGAAGGAATCACT...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
3UTR-3UTR CCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACTTCTATATCCCTGTTTaGAAAAAGGATGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHFYIPV*KKDGCL
Trigger: CAGGCACCCATCCTTTTTCCAAACAGGGATATAGAA...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCCATCACACCAGGACATaGAGTCTCTACATAACCACA +
Preference number: 2 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCHHTRT*SLYITT
Trigger: TGTGGTTATGTAGAGACTCCATGTCCTGGTGTGATG...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
3UTR-3UTR CCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCATCACACCAGGACATaGAGTCTCTACATAACCACA +
Preference number: 2 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRHHTRT*SLYITT
Trigger: TGTGGTTATGTAGAGACTCCATGTCCTGGTGTGATG...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGTTCTATATCCCTGTTTaGAAAAAGGATGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRFYIPV*KKDGCL
Trigger: CAGGCACCCATCCTTTTTCCAAACAGGGATATAGAA...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR TCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGAATTTATCAGCTaGTTTGGGGAAAACCAGTAT +
Preference number: 2 (lower is better)
Translates to: ITESSEAFRLLGETVIPSTEFIS*FGENQY
Trigger: ATACTGGTTTTCCCCAAATCAGCTGATAAATTCAGT...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR-3UTR GCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCACTGGGTTTGTGGGTTaGGCCGAAAACACAGCAGCA +
Preference number: 2 (lower is better)
Translates to: THSLSQMHFRTVNSKVSITGFVG*AENTAA
Trigger: TGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGT...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR-3UTR GCA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCGATCTCACTGGCGTCTaGCCTATTTACCCATCACTG +
Preference number: 2 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSDLTGV*PIYPSL
Trigger: CAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR CAA 90 bp GGGGAAAACCAGTATGTGGACAGGAACATGATGTGTATCATTGGGTaGACTTACAGAATACTCTTAACAGGTCTTCAGTTGATTCTTAGG +
Preference number: 2 (lower is better)
Translates to: GENQYVDRNMMCIIG*TYRILLTGLQLILR
Trigger: CCTAAGAATCAACTGAAGACCTGTTAAGAGTATTCTGTAAGTCAACCCAATGATACACATCATGTTCCTGTCCACATACTGGTTTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR-3UTR CCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCCATGATGTGTATCATTaGGTTGACTTACAGAATACT +
Preference number: 2 (lower is better)
Translates to: THSLSQMHFRTVNSKVSIHDVYH*VDLQNT
Trigger: AGTATTCTGTAAGTCAACCCAATGATACACATCATG...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR-3UTR CAA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGTGGCCTAGGCCCCGGTaGTCATCCTGCATCAGCCGC +
Preference number: 3 (lower is better)
Translates to: VRLQGLPARRGAERLLKLWPRPR*SSCISR
Trigger: GCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCA...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp ATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGGTCAGGGTTCTCTTGTTGTCCTaGAGCCCTTGGCCTAGGCCC +
Preference number: 3 (lower is better)
Translates to: ILATGRASAGAFRYMEVRVLLLS*SPWPRP
Trigger: GGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAAC...CCTGACCTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 72 bp CCTCCAGGCCGCAGTCAAAACCCTTGCGGTGTAAGATaGGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: PPGRSQNPCGVR*VRSPPRVGCPP
Trigger: AGGAGGACACCCTACCCTCGGCGGAGACCGCACTCATCTTACACCGCAAGGGTTTTGACTGCGGCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR GCA 72 bp CAGGGCCTGGGCAGTGTGCAGCGTGAGGCGCTTCTGTaGGTCCTGGATATAGGCCATGACTGGCATGGGGTA +
Preference number: 3 (lower is better)
Translates to: QGLGSVQREALL*VLDIGHDWHGV
Trigger: TACCCCATGCCAGTCATGGCCTATATCCAGGACGCACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR-3UTR CAA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGGGCCAAGTGCCCAGTTaGCCAGGGGTCTTGCTACCT +
Preference number: 3 (lower is better)
Translates to: VRLQGLPARRGAERLLKLGQVPS*PGVLLP
Trigger: AGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGCC...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp AGCTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGTTGCAGGTTCTCTTGTaGTCCTTGAGCCCTTGGCCT +
Preference number: 3 (lower is better)
Translates to: SCILATGRASAGAFRYMELQVLL*SLSPWP
Trigger: AGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAA...CTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp GTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTTCGCCGCTCTAGCAGGAGGTCCAGCTGGCCATCTTaGAGGCTAGAGACACCCAGG +
Preference number: 3 (lower is better)
Translates to: VEWLSWTSLPTVRRSSRRSSWPS*RLETPR
Trigger: CCTGGGTGTCTCTAGCCTCAAAGATGGCCAGCTGGA...CCTCCTGCTAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR TCA 72 bp CTCCTTGTTGACGTAGTCCCGGATGTCCACCAGGGATaGTATGTCCAGAGACAGCCCCTCCACCCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: LLVDVVPDVHQG*YVQRQPLHPWQ
Trigger: CTGCCAGGGGTGGAGGGGCTGTCTCTGGACATATCATCCCTGGTGGACATCCGGGACTACGTCAACAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR CCA 72 bp GAGGCGCTTCTGTGCGTCCTGGATATAGGCCATGACTaGCATGGGGTAGAAGTTGGCCTGGAGGGGGAGCTT +
Preference number: 3 (lower is better)
Translates to: EALLCVLDIGHD*HGVEVGLEGEL
Trigger: AAGCTCCCCCTCCAGGCCAACTTCTACCCCATGCCAGTCATGGCCTATATCCAGGACGCACAGAAGCGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR-3UTR CAA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTCACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGC +
Preference number: 3 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIHWVCG*RRKHSS
Trigger: GCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTG...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCTTGAAGCCCAAGTTCTaGGCCTCCAGGCCGCAGTCA +
Preference number: 3 (lower is better)
Translates to: HRSQREFRQGEGPHTPATLKPKF*ASRPQS
Trigger: TGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAA...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCCACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGC +
Preference number: 3 (lower is better)
Translates to: QAALTAKPSQKAARPSDSHWVCG*RRKHSS
Trigger: GCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTG...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp CCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCGTTCTCTTGTTGTCCTaGAGCCCTTGGCCTAGGCCC +
Preference number: 3 (lower is better)
Translates to: PQEALTQAEAKGSNLHGLVLLLS*SPWPRP
Trigger: GGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAAC...GAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTCGGTTGCAGGTTCTCTaGTTGTCCTTGAGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: HAGQAALTAKPSQKAARPRLQVL*LSLSPW
Trigger: CCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCG...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR GCA 72 bp GCCATGACAATCTCTAGCGAGTCCTTCCTGCCATTCTaGAGCCTGTTAGCCAATGCATGCAGGCCAGGCGGC +
Preference number: 3 (lower is better)
Translates to: AMTISSESFLPF*SLLANACRPGG
Trigger: GCCGCCTGGCCTGCATGCATTGGCTAACAGGCTGCAGAATGGCAGGAAGGACTCGCTAGAGATTGTCATGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 72 bp AAACGGTTGCAGGTTCTCTTGTTGTCCTTGAGCCCTTaGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGC +
Preference number: 3 (lower is better)
Translates to: KRLQVLLLSLSP*PRPRLSSCISR
Trigger: GCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 3 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLGYPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGTATCC...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp TGTGGTGCAGTTGAAGCCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTTCACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGC +
Preference number: 3 (lower is better)
Translates to: CGAVEAQVLGLQAAVKTLHWVCG*RRKHSS
Trigger: GCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTG...AAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCC +
Preference number: 3 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPRRRKR*QVLLLS
Trigger: GGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCC +
Preference number: 3 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGRRRKR*QVLLLS
Trigger: GGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp TGTGGTGCAGTTGAAGCCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTTGGTAGAGTGGCTATCTaGGACCTCACTGCCCACGGT +
Preference number: 3 (lower is better)
Translates to: CGAVEAQVLGLQAAVKTLGRVAI*DLTAHG
Trigger: ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACC...AAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTCTGCCCAGGGCTACCTaGCCTTGGCTTGTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: LLSLISLASALFTHHWVCLPRAT*PWLVVQ
Trigger: CTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCAG...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 72 bp CGCCTGGTGAATGTGCTCATAGTACGCAACCACCTCTaGGAAGAAAGGGCCTTCAGTGACACGCAGCACGGG +
Preference number: 3 (lower is better)
Translates to: RLVNVLIVRNHL*EERAFSDTQHG
Trigger: CCCGTGCTGCGTGTCACTGAAGGCCCTTTCTTCTCAGAGGTGGTTGCGTACTATGAGCACATTCACCAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR GCA 72 bp GACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTaGCCTATTTACCCATCACTGGGTTTGTGGGTTGCG +
Preference number: 3 (lower is better)
Translates to: DQGPSLPDLTGV*PIYPSLGLWVA
Trigger: CGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR GCA 72 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTaGCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: CLLGVVLNAFSS*PSTWSLGGFPF
Trigger: GAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 72 bp CAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGGATACCCGTGTGGCTT +
Preference number: 3 (lower is better)
Translates to: QKMRAEPSVSQF*EADRDGIPVWL
Trigger: AAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 72 bp TTGGAAAAAGGATGGGTGCCTGAGCCTGTGCCCAGTTaGGTGTCCACTCACAACCCAAAGCAGAGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: LEKGWVPEPVPS*VSTHNPKQSLA
Trigger: TGCCAGGCTCTGCTTTGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTTTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCAAGCACATGGAGTCTaGGAGGCTTTCCTTTCCAGA +
Preference number: 3 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSQAHGV*EAFLSR
Trigger: TCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTG...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCATGTTCCTCATCTGGCTaGTTGCAGGGGTTAGTAGTG +
Preference number: 3 (lower is better)
Translates to: SQREFRQGEGPHTPATIPCSSSG*LQGLVV
Trigger: CACTACTAACCCCTGCAACAAGCCAGATGAGGAACA...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGGTAGAGTGGCTATCTaGGACCTCACTGCCCACGGT +
Preference number: 3 (lower is better)
Translates to: GTYCKAITESSEAFRLLGGRVAI*DLTAHG
Trigger: ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACC...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR GCA 72 bp AGAGGTAGGCTCCACTCTTGTCTTTGGACGTACGGGTaGCATAGACAAGGACCTGCATGTCCACCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: RGRLHSCLWTYG*HRQGPACPPAA
Trigger: AGCAGCAGGTGGACATGCAGGTCCTTGTCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAGCCTACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR CCA 72 bp GCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGTCCAATGATCTTCATG +
Preference number: 3 (lower is better)
Translates to: AQCVTVLGGRSG*DTRVACPMIFM
Trigger: CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 72 bp CTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTaGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: LISLASALFTHH*VCGLRRKHSSS
Trigger: GCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 72 bp CAATCTCCATGGGCTCCAAATAGACGTCAGTGCTGTTaGACGGGGAGGCCAGAGGGTACAGTAACGTCAAGG +
Preference number: 3 (lower is better)
Translates to: QSPWAPNRRQCC*TGRPEGTVTSR
Trigger: CCTTGACGTTACTGTACCCTCTGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGGAGCCCATGGAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAACACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGC +
Preference number: 3 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQHWVCG*RRKHSS
Trigger: GCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTG...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTCACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGC +
Preference number: 3 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSHWVCG*RRKHSS
Trigger: GCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTG...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACCCATCACTGGGTTaGTGGGTTGCGCCGAAAACA +
Preference number: 3 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAYPSLG*WVAPKT
Trigger: TGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTA...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp CTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGCTTCTATATCCCTGTTaGGAAAAAGGATGGGTGCCT +
Preference number: 3 (lower is better)
Translates to: LPARRGAERLLKLPKHMELLYPC*EKGWVP
Trigger: AGGCACCCATCCTTTTTCCAAACAGGGATATAGAAG...CTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACCAGGGCTACCTTGCCTaGGCTTGTGGTGCAGTTGAA +
Preference number: 3 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHQGYLA*ACGAVE
Trigger: TTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCTG...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCAGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACAT +
Preference number: 3 (lower is better)
Translates to: SQREFRQGEGPHTPATIPVTSRR*AEGIPH
Trigger: ATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTAC...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 72 bp GAGGCCAGAGGGTACAGTAACGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGGCCATGGAAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: EARGYSNVKEVG*RNTTSRPWKRL
Trigger: CAGCCTTTTCCATGGCCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTACTGTACCCTCTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 72 bp CGATGTCTGTATGGATGTGCAGGGCCAGCTCCTTGTTaGCGTAGTCCCGGATGTCCACCAGGGATGATATGT +
Preference number: 3 (lower is better)
Translates to: RCLYGCAGPAPC*RSPGCPPGMIC
Trigger: ACATATCATCCCTGGTGGACATCCGGGACTACGTCAACAAGGAGCTGGCCCTGCACATCCATACAGACATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
3UTR GCA 72 bp ATCCCTGTTTGGAAAAAGGATGGGTGCCTGAGCCTGTaGCCAGTTGGGTGTCCACTCACAACCCAAAGCAGA +
Preference number: 3 (lower is better)
Translates to: IPVWKKDGCLSL*PVGCPLTTQSR
Trigger: TCTGCTTTGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTTTCCAAACAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp CCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 3 (lower is better)
Translates to: PQEALTQAEAKGSNLHGLGYPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGTATCC...GAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR-3UTR CAA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAATACCCATCACTGGGTTaGTGGGTTGCGCCGAAAACA +
Preference number: 3 (lower is better)
Translates to: ADRLKVRLQGLPARRGAEYPSLG*WVAPKT
Trigger: TGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTA...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTCTTCTATATCCCTGTTaGGAAAAAGGATGGGTGCCT +
Preference number: 3 (lower is better)
Translates to: HAGQAALTAKPSQKAARPLLYPC*EKGWVP
Trigger: AGGCACCCATCCTTTTTCCAAACAGGGATATAGAAG...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGATGGAGCGTACGTAGGTaGAGCAGGTGGAAGTCACAG +
Preference number: 3 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGWSVRR*SRWKSQ
Trigger: CTGTGACTTCCACCTGCTCAACCTACGTACGCTCCA...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR TCA 72 bp ACTTCTATATCCCTGTTTGGAAAAAGGATGGGTGCCTaGGCCTGTGCCCAGTTGGGTGTCCACTCACAACCC +
Preference number: 3 (lower is better)
Translates to: TSISLFGKRMGA*ACAQLGVHSQP
Trigger: GGGTTGTGAGTGGACACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTTTCCAAACAGGGATATAGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR GCA 72 bp GCTGTTACCCACTTAGCCTCCCTTACCTCTTCTGTCTaGTTCCACCACTTCTATATCCCCGTGTGGCTTGTC +
Preference number: 3 (lower is better)
Translates to: AVTHLASLTSSV*FHHFYIPVWLV
Trigger: GACAAGCCACACGGGGATATAGAAGTGGTGGAAGCAGACAGAAGAGGTAAGGGAGGCTAAGTGGGTAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561448.5
3UTR-3UTR CAA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACTGTTCCTCATCTGGCTaGTTGCAGGGGTTAGTAGTG +
Preference number: 3 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHCSSSG*LQGLVV
Trigger: CACTACTAACCCCTGCAACAAGCCAGATGAGGAACA...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTAGTTTGCCAGGGGTCTaGCTACCTGAAGTGACCTAT +
Preference number: 3 (lower is better)
Translates to: LLSLISLASALFTHHWVCSLPGV*LPEVTY
Trigger: ATAGGTCACTTCAGGTAGCAAGACCCCTGGCAAACT...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR TCA 72 bp ACTCTTGTCTTTAGGTGGCAGCTTGGCAGGCCCCAGTaGCTTTCTCTAAGGACCCTGAAGCAAGCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: TLVFRWQLGRPQ*LSLRTLKQAFL
Trigger: GAGAAAAGCTTGCTTCAGGGTCCTTAGAGAAAGTCACTGGGGCCTGCCAAGCTGCCACCTAAAGACAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR CCA 72 bp GAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTaGAGGCTTTCCTTTCCAGAGAAAGAAAGTAGGACC +
Preference number: 3 (lower is better)
Translates to: ERLLKLPKHMES*RLSFPEKESRT
Trigger: GGTCCTACTTTCTTTCTCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 3 (lower is better)
Translates to: LLSLISLASALFTHHWVCGYPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGTATCC...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCTTCTATATCCCTGTTaGGAAAAAGGATGGGTGCCT +
Preference number: 3 (lower is better)
Translates to: AERLLKLPKHMESWRLSFLLYPC*EKGWVP
Trigger: AGGCACCCATCCTTTTTCCAAACAGGGATATAGAAG...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCATATCCCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 3 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTISPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGGATAT...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561448.5
3UTR TCA 72 bp GTCTTGCTACCTGAAGTGACCTATGATCTCTGGCCATaGCAATCTCTAGCGAGTCCTTCCTGCCATTCTGCA +
Preference number: 3 (lower is better)
Translates to: VLLPEVTYDLWP*QSLASPSCHSA
Trigger: TGCAGAATGGCAGGAAGGACTCGCTAGAGATTGTCATGGCCAGAGATCATAGGTCACTTCAGGTAGCAAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR TCA 72 bp GGCTTGTTGCAGGGGTTAGTAGTGCCGGGACACTGCTaGATAATAGCTTGCCCTTGGCTAGTTTCTGACTTT +
Preference number: 3 (lower is better)
Translates to: GLLQGLVVPGHC*IIACPWLVSDF
Trigger: AAAGTCAGAAACTAGCCAAGGGCAAGCTATTATTCAGCAGTGTCCCGGCACTACTAACCCCTGCAACAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559704.1
ENST00000559717.6
ENST00000560451.5
3UTR GCA 72 bp TTCCAGAGAAAGAAAGTAGGACCAATCCCCACTCCCTaGCATAATAAGAAAGAGCCCTTGGGGACAGCAGCA +
Preference number: 3 (lower is better)
Translates to: FQRKKVGPIPTP*HNKKEPLGTAA
Trigger: TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCCTACTTTCTTTCTCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR GCA 72 bp GCCTCCTCATATACTCTACATGCCCCTAGTCCCCTGTaGCAGGAACTGAATACCTCTGCAGATAGACTAAAG +
Preference number: 3 (lower is better)
Translates to: ASSYTLHAPSPL*QELNTSADRLK
Trigger: CTTTAGTCTATCTGCAGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 3 (lower is better)
Translates to: LPITGFVGCAENTAAAINGYPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGTATCC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR GCA 72 bp CGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTaGGCCGAAAACACAGCAGCAGCAATAAACAGAAAA +
Preference number: 3 (lower is better)
Translates to: RLPYLPITGFVG*AENTAAAINRK
Trigger: TTTTCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR-3UTR CAA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 3 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADGYPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGTATCC...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR GCA 72 bp TTAATGGGAATGCCTGTGGCGTCTGACTCTTTAGAATaGCATCACTGTTGGTTTCCGTGTGGCTTGTCCAAT +
Preference number: 3 (lower is better)
Translates to: LMGMPVASDSLE*HHCWFPCGLSN
Trigger: ATTGGACAAGCCACACGGAAACCAACAGTGATGGCATTCTAAAGAGTCAGACGCCACAGGCATTCCCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559704.1
3UTR GCA 72 bp TTAATGGGAATGCCTGTGGCGTCTGACTCTTTAGAATaGCATCACTGTTGGTTTCTGAAACAGACCTTTATC +
Preference number: 3 (lower is better)
Translates to: LMGMPVASDSLE*HHCWFLKQTFI
Trigger: GATAAAGGTCTGTTTCAGAAACCAACAGTGATGGCATTCTAAAGAGTCAGACGCCACAGGCATTCCCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CCA 72 bp AAACCAGTATGTGGACAGGAACATGATGTGTATCATTaGGTTGACTTACAGAATACTCTTAACAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: KPVCGQEHDVYH*VDLQNTLNRSS
Trigger: TGAAGACCTGTTAAGAGTATTCTGTAAGTCAACCCAATGATACACATCATGTTCCTGTCCACATACTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCGGGTCCGCCAGCCTCTaGAGCTGCCGGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRPRLSSCISRRSKITSSGSASL*SCRAQQ
Trigger: CTGCTGGGCCCGGCAGCTTCAGAGGCTGGCGGACCC...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGCCAGAGCGGCGAGCGTaGGCTGCAGCCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SAVSAEGRVSSSAWSVRRPERRA*AAARLY
Trigger: GTACAGCCTGGCTGCAGCTCACGCTCGCCGCTCTGG...CCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGGGGCCGGGGCTCCGGTaGCACCACCCAGGAGCCATT +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPGPGLR*HHPGAI
Trigger: AATGGCTCCTGGGTGGTGCCACCGGAGCCCCGGCCC...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGGCGCAGACCAGGGCCTaGGAGCTGCATCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: SAVSAEGRVSSSAWSVRRAQTRA*ELHPGY
Trigger: GTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGC...CCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCGGGCAGTGTGCAGCGTaGGGCGCTTCTGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: PRPRLSSCISRRSKITSSGQCAA*GASVRP
Trigger: AGGACGCACAGAAGCGCCTCACGCTGCACACTGCCC...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGAGGCCCAGCTGTAGCTaGAGCACGCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPRPSCS*STPRPR
Trigger: CCTGGGCCTGGGCGTGCTGCAGCTACAGCTGGGCCT...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGCCTTCCAAGGGCAGTTaGTGCGCCCACCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPPSKGS*CAHQAG
Trigger: GCCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGG...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGGGCCTGGGAGCTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGAGCCCAGTAAGGCCTaGGAACCAGACCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: RAWELHPGYRQSERRGVQEPSKA*EPDLHV
Trigger: TACATGCAGGTCTGGTTCTCAGGCCTTACTGGGCTC...CTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTGGCGGGCGGGCCCTCTaGGTTGGCTGTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSGGRAL*VGCQLQ
Trigger: CTGGAGCTGACAGCCAACGCAGAGGGCCCGCCCGCC...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGGGAAGAGCCCCAATGTaGGCCGAGCTTCCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SAVSAEGRVSSSAWSVRRGRAPM*AELPSG
Trigger: TCCTGACGGAAGCTCGGCGCACATTGGGGCTCTTCC...CCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGTCCACCTGCTGCTCGTaGTCCTCATCCACCCTTCGG +
Preference number: 4 (lower is better)
Translates to: SAVSAEGRVSSSAWSVRRSTCCS*SSSTLR
Trigger: CCGAAGGGTGGATGAGGAGCACGAGCAGCAGGTGGA...CCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGGCGGGCCCTCTGCGTTaGCTGTCAGCTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LPARRGAERLLKLPKHMEAGPLR*LSAPAR
Trigger: CCGTGCTGGAGCTGACAGCCAACGCAGAGGGCCCGC...CTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCGGGCCGGGGCTCCGGTaGCACCACCCAGGAGCCATT +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATGPGLR*HHPGAI
Trigger: AATGGCTCCTGGGTGGTGCCACCGGAGCCCCGGCCC...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTGGGCCGGGGCTCCGGTaGCACCACCCAGGAGCCATT +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSGPGLR*HHPGAI
Trigger: AATGGCTCCTGGGTGGTGCCACCGGAGCCCCGGCCC...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAAGATGGAGAAGAAGCTaGGCCGGGGCTCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSRWRRS*AGAPVA
Trigger: TGCCACCGGAGCCCCGGCCCAGCTTCTTCTCCATCT...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTGGAGGCCGGGCCCCTaGCTCCACCCCTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LPARRGAERLLKLPKHMEWRPGP*LHPCPL
Trigger: AAGAGGACAGGGGTGGAGCCAGGGGCCCGGCCTCCA...CTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGGAGACACCCAGGGCCTaGGCAGTGTGCAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPETPRA*AVCSVR
Trigger: CCTCACGCTGCACACTGCCCAGGCCCTGGGTGTCTC...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTCCTTCCAAGGGCAGTTaGTGCGCCCACCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRPSKGS*CAHQAG
Trigger: GCCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGG...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGGGGAGCGCAGAAGCCTaGCCCCATAGTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPGSAEA*PHSPPP
Trigger: TGGTGGTGGACTATGGGGTCAGGCTTCTGCGCTCCC...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACGCTTCGTGCCTGCTaGCGGACAGCTGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSTLRAC*RTAAGR
Trigger: ACGGCCGGCAGCTGTCCGTCAGCAGGCACGAAGCGT...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGAAAAGGATGGGTGCCTaGGCCTGTGCCCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SAVSAEGRVSSSAWSVRRKRMGA*ACAQLG
Trigger: ACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTT...CCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCCGCCGGGGGTCCTCCTaGAGCTTAGACACCATGCTA +
Preference number: 4 (lower is better)
Translates to: PRPRLSSCISRRSKITSSRRGSS*SLDTML
Trigger: TAGCATGGTGTCTAAGCTGCAGGAGGACCCCCGGCG...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGAGGGCAGCGTGCGGTaGCCATCCAGGCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVEGSVR*PSRPSC
Trigger: ACAGCTGGGCCTGGATGGGCACCGCACGCTGCCCTC...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGGCGGGCCCTCTGCGTTaGCTGTCAGCTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: VRLQGLPARRGAERLLKLAGPLR*LSAPAR
Trigger: CCGTGCTGGAGCTGACAGCCAACGCAGAGGGCCCGC...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCGCGGGCCCTCTGCGTTaGCTGTCAGCTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATAGPLR*LSAPAR
Trigger: CCGTGCTGGAGCTGACAGCCAACGCAGAGGGCCCGC...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCAGCACAGGAAACCCTaGAGGCCGGGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSQHRKP*RPGPWL
Trigger: GAGCCAGGGGCCCGGCCTCCAGGGTTTCCTGTGCTG...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAGTCGGGGCTGCACCCTaGCTGTCGATGTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSVGAAP*LSMSVW
Trigger: CCATACAGACATCGACAGCCAGGGTGCAGCCCCGAC...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCGCACTCGGTCCAGCATaGGGTAGAGCGAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: PRPRLSSCISRRSKITSSALGPA*GRARRL
Trigger: CAGTCTTCTCGCTCTACCTCATGCTGGACCGAGTGC...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCACCTTCCAAGGGCAGTTaGTGCGCCCACCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SQREFRQGEGPHTPATIPPSKGS*CAHQAG
Trigger: GCCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGG...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCCACGTTGGCCTCTGTaGTGGCCCGGGGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGPRWPL*WPGVAP
Trigger: AGGTGCCACCCCGGGCCATCACAGAGGCCAACGTGG...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCCACGTTGGCCTCTGTaGTGGCCCGGGGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVPRWPL*WPGVAP
Trigger: AGGTGCCACCCCGGGCCATCACAGAGGCCAACGTGG...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAACCAGAGCGGCGAGCGTaGGCTGCAGCCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VSQFWEADRDGIPVWLVQPERRA*AAARLY
Trigger: GTACAGCCTGGCTGCAGCTCACGCTCGCCGCTCTGG...TTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCATCTGGGAGGGCGTCGTaGCTTAAGCGAGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSSGRAS*LKRVSS
Trigger: GGATGACACTCGCTTAAGTCACGACGCCCTCCCAGA...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCTGCACGGCCAGGGGCTaGCCCTCCTCCGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSCTARG*PSSERT
Trigger: TGTCCTTTCGGAGGAGGGTCAGCCCCTGGCCGTGCA...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCAGCTCCAGTGTGCGCTaGTCTGCACGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATSSSVR*SARPGA
Trigger: AGCCCCTGGCCGTGCAGATCAGCGCACACTGGAGCT...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGCTTCGTGCCTGCTaGCGGACAGCTGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFTLRAC*RTAAGR
Trigger: ACGGCCGGCAGCTGTCCGTCAGCAGGCACGAAGCGT...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGCGTCGGGGCTGCACCTaGAAGCCATTGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPRRGCT*KPLRSV
Trigger: CACAGACCTCAATGGCTTTCAGGTGCAGCCCCGACG...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000559717.6
CDS-3UTR GCA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGCGCCGGGGGTCCTCCTaGAGCTTAGACACCATGCTA +
Preference number: 4 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLRRGSS*SLDTML
Trigger: TAGCATGGTGTCTAAGCTGCAGGAGGACCCCCGGCG...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp ATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGGTCAGGGCACCAGGAGGACGTTaGTTCGGAACAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: ILATGRASAGAFRYMEVRAPGGR*FGTAGT
Trigger: AGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGC...CCTGACCTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCCCAGCTGGATCACCGTaGGCTCTGGGAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATPAGSP*ALGGRR
Trigger: ACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGG...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGCCAGCTGGATCACCGTaGGCTCTGGGAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVPAGSP*ALGGRR
Trigger: ACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGG...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGAGGCCCAGCTGTAGCTaGAGCACGCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGRPSCS*STPRPR
Trigger: CCTGGGCCTGGGCGTGCTGCAGCTACAGCTGGGCCT...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAATCTCCATGGGCTCCAAATAGACGTCAGTGCTGTTGGACGGGGAGGCCAGAGGAGGGCAGCGTGCGGTaGCCATCCAGGCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QSPWAPNRRQCCWTGRPEEGSVR*PSRPSC
Trigger: ACAGCTGGGCCTGGATGGGCACCGCACGCTGCCCTC...CTCTGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGGAGCCCATGGAGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCTGCCCAGGGCTACCTTaGCTTGGCTTGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PRPRLSSCISRRSKITSSCPGLP*LGLWCS
Trigger: ACTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCA...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAGGCCATGGAAAAGGCTaGCCAGGGCTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSGHGKG*PGLPCL
Trigger: AAGGCAAGGTAGCCCTGGGCAGCCTTTTCCATGGCC...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGCCTAGAGCCTGCTGTTaGCACAGTGACCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: SAVSAEGRVSSSAWSVRRPRACC*HSDPDA
Trigger: AGCATCAGGGTCACTGTGGCAACAGCAGGCTCTAGG...CCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAAGGACCCCACACCCCTaGCACCATCCCACAAATCAG +
Preference number: 4 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSRTPHP*HHPTNQ
Trigger: CTGATTTGTGGGATGGTGGCAGGGGTGTGGGGTCCT...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCAAGGAGGACGCTAACTaGGGAGCCGAGCGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSKEDAN*GAERGR
Trigger: CCGCCCACGCTCGGCTCCGCAGTTAGCGTCCTCCTT...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559717.6
CDS-3UTR CCA 90 bp ACACCCAGGGCCTGGGCAGTGTGCAGCGTGAGGCGCTTCTGTGCGTCCTGGATAGCAGATCTTGGGATCTaGGCCACAGGTATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: TPRAWAVCSVRRFCASWIADLGI*ATGMGD
Trigger: GTCCCCCATACCTGTGGCCCAGATCCCAAGATCTGC...TATCCAGGACGCACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCTGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS-3UTR CCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCCAGCACAGGAAACCCTaGAGGCCGGGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSQHRKP*RPGPWL
Trigger: GAGCCAGGGGCCCGGCCTCCAGGGTTTCCTGTGCTG...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGCAGGGACCGCCTCGGTaGCAGAGCTCCAGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGQGPPR*QSSSVR
Trigger: GCGCACACTGGAGCTCTGCCACCGAGGCGGTCCCTG...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGGGGACGTAGGGCTTaGCCTCGCCATCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIWGRRA*PRHRAG
Trigger: TCCTGCCCGATGGCGAGGCCAAGCCCTACGTCCCCA...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGCAGCCCCTCCACCCCTaGCAGATTGTAAAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLQPLHP*QIVKPD
Trigger: GTCCGGCTTTACAATCTGCCAGGGGTGGAGGGGCTG...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGAGACGTCAGTGCTGTTaGACGGGGAGGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLRRQCC*TGRPEG
Trigger: ACCCTCTGGCCTCCCCGTCCAACAGCACTGACGTCT...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCCCACGTTGGCCTCTGTaGTGGCCCGGGGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSPRWPL*WPGVAP
Trigger: AGGTGCCACCCCGGGCCATCACAGAGGCCAACGTGG...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCCCACGTTGGCCTCTGTaGTGGCCCGGGGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFPRWPL*WPGVAP
Trigger: AGGTGCCACCCCGGGCCATCACAGAGGCCAACGTGG...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTGGGAGCGCAGAAGCCTaGCCCCATAGTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSGSAEA*PHSPPP
Trigger: TGGTGGTGGACTATGGGGTCAGGCTTCTGCGCTCCC...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGCACGCGGGGAGAGTTaGCCAGCAGGGACACCATGC +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFARGES*PAGTPC
Trigger: GCATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAAGCACGCGGGGAGAGTTaGCCAGCAGGGACACCATGC +
Preference number: 4 (lower is better)
Translates to: VSQFWEADRDGIPVWLVQARGES*PAGTPC
Trigger: GCATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGC...TTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCAGGGATGATATGTCCAGAGACAGCCCCTCCACCCCTGGCAGATTGTAAAGCCAGCTCCAGTGTGCGCTaGTCTGCACGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGMICPETAPPPLADCKASSSVR*SARPGA
Trigger: AGCCCCTGGCCGTGCAGATCAGCGCACACTGGAGCT...GGCTTTACAATCTGCCAGGGGTGGAGGGGCTGTCTCTGGACATATCATCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS-3UTR TCA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAGATGTCCACCAGGGATaGTATGTCCAGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSDVHQG*YVQRQP
Trigger: GGGCTGTCTCTGGACATATCATCCCTGGTGGACATC...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCGGGCAGTGTGCAGCGTaGGGCGCTTCTGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSGQCAA*GASVRP
Trigger: AGGACGCACAGAAGCGCCTCACGCTGCACACTGCCC...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTAGCCAGAGGATGAAATaGGCGCAGACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRSQRMK*AQTRAW
Trigger: CCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCT...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTGAGGAAGCCAGAGGATaGAATGAGCGCAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: LGLGPGCHPASAAGPRSPEEARG*NERRPG
Trigger: CCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTC...AGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGGCGGGCGGGCCCTCTaGGTTGGCTGTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTGGRAL*VGCQLQ
Trigger: CTGGAGCTGACAGCCAACGCAGAGGGCCCGCCCGCC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCGGCACCACAAACACCTaGAGGTCTTCAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: PWPRPRLSSCISRRSKITGTTNT*RSSASQ
Trigger: CTGGGATGCTGAAGACCTGCAGGTGTTTGTGGTGCC...GGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp AGCTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGGGCACCACAAACACCTaGAGGTCTTCAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: SCILATGRASAGAFRYMEGTTNT*RSSASQ
Trigger: CTGGGATGCTGAAGACCTGCAGGTGTTTGTGGTGCC...CTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGGAGGGATGGGTAGCTGGTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTGAAGAAGGAGACCTCTaGCCAGAGGAAGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: EEGWVAGRVAILDLTAHGEEGDL*PEEAPP
Trigger: CGGCGGCGCTTCCTCTGGGCAGAGGTCTCCTTCTTC...ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACCAGCTACCCATCCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCGGCAGAGCTCCAGTGTaGGCTGATCTGCACGGCCAG +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSGRAPV*ADLHGQ
Trigger: CTGGCCGTGCAGATCAGCGCACACTGGAGCTCTGCC...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCAGGCAGAGCTCCAGTGTaGGCTGATCTGCACGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQREFRQGEGPHTPATIPGRAPV*ADLHGQ
Trigger: CTGGCCGTGCAGATCAGCGCACACTGGAGCTCTGCC...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCCCCGGTTGTCATCCTaGATCAGCCGCCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSPRLSS*ISRRSK
Trigger: CTTGGACCGGCGGCTGATGCAGGATGACAACCGGGG...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGGGCCATGGAAAAGGCTaGCCAGGGCTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPGHGKG*PGLPCL
Trigger: AAGGCAAGGTAGCCCTGGGCAGCCTTTTCCATGGCC...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTGGAGGCCGGGCCCCTaGCTCCACCCCTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGWRPGP*LHPCPL
Trigger: AAGAGGACAGGGGTGGAGCCAGGGGCCCGGCCTCCA...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TGTGGTGCAGTTGAAGCCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTTCAGCACAGGAAACCCTaGAGGCCGGGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CGAVEAQVLGLQAAVKTLQHRKP*RPGPWL
Trigger: GAGCCAGGGGCCCGGCCTCCAGGGTTTCCTGTGCTG...AAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPVAEEG*VAGRVA
Trigger: AGCCACTCTACCAGCTACCCATCCCTCCTCAGCCAC...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTCTGGGAGCTGCATCCTaGCTACAGGCAGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPILGAAS*LQAERA
Trigger: CGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAG...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGGTCAGGAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ILATGRASAGAFRYMEVRSVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...CCTGACCTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGAGCTGCCCAAGCACATaGAGTCTTGGAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SAVSAEGRVSSSAWSVRRSCPST*SLGGFP
Trigger: AGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCT...CCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACCTGCTCCGCGGGCCCTaGGGCCGAGGAGCTTTGTCG +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHLLRGP*GRGALS
Trigger: CGACAAAGCTCCTCGGCCCCAGGGCCCGCGGAGCAG...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559717.6
3UTR CAA 72 bp CTCTTGTTGTCCTTGAGCCCTTGGCCTAGGCCCCGGTaGTCATCCTGCATCAGCCGCCGGTCCAAGATCACC +
Preference number: 4 (lower is better)
Translates to: LLLSLSPWPRPR*SSCISRRSKIT
Trigger: GGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 72 bp CGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTaGTTGTCCTTGAGCCCTTGGCCTAGGCCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: RSSRRRKRLQVL*LSLSPWPRPRL
Trigger: CAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 72 bp CCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCCTTGAGCCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PTVRRSSRRRKR*QVLLLSLSPWP
Trigger: AGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 72 bp CCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTaGCGGTGTAAGATGAGTGCGGTCTCCGCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: PKFLASRPQSKP*RCKMSAVSAEG
Trigger: ACCCTCGGCGGAGACCGCACTCATCTTACACCGCAAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGGAATCAGCATGCTGGTaGGGTTGGCACGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VRLQGLPARRGAERLLKLESACW*GWHGAA
Trigger: TGCTGCGCCGTGCCAACCTCACCAGCATGCTGATTC...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCACGTTGGCCTCTGTaGTGGCCCGGGGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFPRWPL*WPGVAP
Trigger: AGGTGCCACCCCGGGCCATCACAGAGGCCAACGTGG...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCCCAGAGCGGCGAGCGTaGGCTGCAGCCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTPERRA*AAARLY
Trigger: GTACAGCCTGGCTGCAGCTCACGCTCGCCGCTCTGG...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTTCTGGGAGGGCGTCGTaGCTTAAGCGAGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRSGRAS*LKRVSS
Trigger: GGATGACACTCGCTTAAGTCACGACGCCCTCCCAGA...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATGCACGGCCAGGGGCTaGCCCTCCTCCGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAACTARG*PSSERT
Trigger: TGTCCTTTCGGAGGAGGGTCAGCCCCTGGCCGTGCA...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGACGCTTCGTGCCTGCTaGCGGACAGCTGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQTLRAC*RTAAGR
Trigger: ACGGCCGGCAGCTGTCCGTCAGCAGGCACGAAGCGT...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGCATGTAGCGGTTGCTaGGGGCGAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFACSGC*GRSRWC
Trigger: GCACCAGCGACTTCGCCCTCAGCAACCGCTACATGC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGGCATGTAGCGGTTGCTaGGGGCGAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGACSGC*GRSRWC
Trigger: GCACCAGCGACTTCGCCCTCAGCAACCGCTACATGC...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGGGCAGTGTGCAGCGTaGGGCGCTTCTGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYGQCAA*GASVRP
Trigger: AGGACGCACAGAAGCGCCTCACGCTGCACACTGCCC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCTGGAGGTCAGGTGGCTaGGGAGGGATGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVWRSGG*GGMGSW
Trigger: CCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCA...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGTGGAGGTCAGGTGGCTaGGGAGGGATGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGWRSGG*GGMGSW
Trigger: CCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCA...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTGGAGGTCAGGTGGCTaGGGAGGGATGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSWRSGG*GGMGSW
Trigger: CCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCA...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCAGCCAGAGGATGAAATaGGCGCAGACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATSQRMK*AQTRAW
Trigger: CCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCT...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGAGGAAGCCAGAGGATaGAATGAGCGCAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTREEARG*NERRPG
Trigger: CCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTC...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAACCTTGCGGTGTAAGATaGGTGCGGTCTCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VSQFWEADRDGIPVWLVQPCGVR*VRSPPR
Trigger: CCTCGGCGGAGACCGCACTCATCTTACACCGCAAGG...TTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGCTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: SCILATGRASAGAFRYMEVKEVG*RNTTSR
Trigger: CCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGAC...CTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCGCCGGGGGTCCTCCTaGAGCTTAGACACCATGCTA +
Preference number: 4 (lower is better)
Translates to: VRLQGLPARRGAERLLKLRRGSS*SLDTML
Trigger: TAGCATGGTGTCTAAGCTGCAGGAGGACCCCCGGCG...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ACACCCAGGGCCTGGGCAGTGTGCAGCGTGAGGCGCTTCTGTGCGTCCTGGATACACCAGCCTTCGGACTaGCGCTCTCTTTTGGACATT +
Preference number: 4 (lower is better)
Translates to: TPRAWAVCSVRRFCASWIHQPSD*RSLLDI
Trigger: AATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTG...TATCCAGGACGCACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS-3UTR GCA 90 bp ATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGGTCAGGGACAGAAGATGTCTGTaGTGGAGTCCGAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: ILATGRASAGAFRYMEVRDRRCL*WSPSPM
Trigger: CATGGGACTCGGACTCCAGCACAGACATCTTCTGTC...CCTGACCTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCGGAAGAGCCCCAATGTaGGCCGAGCTTCCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSGRAPM*AELPSG
Trigger: TCCTGACGGAAGCTCGGCGCACATTGGGGCTCTTCC...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTAGGCCCAGCTGTAGCTaGAGCACGCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFRPSCS*STPRPR
Trigger: CCTGGGCCTGGGCGTGCTGCAGCTACAGCTGGGCCT...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGAGGGCAGCGTGCGGTaGCCATCCAGGCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTEGSVR*PSRPSC
Trigger: ACAGCTGGGCCTGGATGGGCACCGCACGCTGCCCTC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATGAGGGCAGCGTGCGGTaGCCATCCAGGCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHEGSVR*PSRPSC
Trigger: ACAGCTGGGCCTGGATGGGCACCGCACGCTGCCCTC...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATCAGAGGAGGGCAGCGTaGGGTGCCCATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHQRRAA*GAHPGP
Trigger: TGGGCCTGGATGGGCACCGCACGCTGCCCTCCTCTG...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCAGAGGAGGGCAGCGTaGGGTGCCCATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLQRRAA*GAHPGP
Trigger: TGGGCCTGGATGGGCACCGCACGCTGCCCTCCTCTG...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCACAGAGGAGGGCAGCGTaGGGTGCCCATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQAQRRAA*GAHPGP
Trigger: TGGGCCTGGATGGGCACCGCACGCTGCCCTCCTCTG...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTTCCACCTGCTGCTCGTaGTCCTCATCCACCCTTCGG +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSSTCCS*SSSTLR
Trigger: CCGAAGGGTGGATGAGGAGCACGAGCAGCAGGTGGA...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCAGGGCCTGGGCAGTGTaGAGCGTGAGGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSRAWAV*SVRRFC
Trigger: ACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCT...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCCCAGGGCCTGGGAGCTaGATCCTGGCTACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSPGPGS*ILATGR
Trigger: TCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGG...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCACTGGGTTTGTGGGTTaGGCCGAAAACACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PRPRLSSCISRRSKITSSTGFVG*AENTAA
Trigger: TGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGT...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGGATCTCACTGGCGTCTaGCCTATTTACCCATCACTG +
Preference number: 4 (lower is better)
Translates to: SAVSAEGRVSSSAWSVRRDLTGV*PIYPSL
Trigger: CAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC...CCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp AATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATGGGTGCCTGAGCCTGTaGCCAGTTGGGTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: NEGRAQCVTVLGGRSGWDGCLSL*PVGCPL
Trigger: GAGTGGACACCCAACTGGGCACAGGCTCAGGCACCC...ATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGGGTGCCTGAGCCTGTaGCCAGTTGGGTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFGCLSL*PVGCPL
Trigger: GAGTGGACACCCAACTGGGCACAGGCTCAGGCACCC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACCCCAGTCGGCCGAGCTaGCGGCTCTCACACGCCCGG +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINPSRPS*RLSHAR
Trigger: CCGGGCGTGTGAGAGCCGGCAGCTCGGCCGACTGGG...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGAACTGGGCCTGCACATaGAGGTTAGGCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPNWACT*RLGLLL
Trigger: CAACAGCAGGCCTAACCTCCATGTGCAGGCCCAGTT...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAATGGAGGCCGGGCCCCTaGCTCCACCCCTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAEWRPGP*LHPCPL
Trigger: AAGAGGACAGGGGTGGAGCCAGGGGCCCGGCCTCCA...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCAGATTGTAAAGCCGGACCGCCTGGTGAATGTGCTCATAGTACGCAACCACCTTGGAGGCCGGGCCCCTaGCTCCACCCCTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ADCKAGPPGECAHSTQPPWRPGP*LHPCPL
Trigger: AAGAGGACAGGGGTGGAGCCAGGGGCCCGGCCTCCA...AGGTGGTTGCGTACTATGAGCACATTCACCAGGCGGTCCGGCTTTACAATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS-3UTR CCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACCAGCACAGGAAACCCTaGAGGCCGGGCCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHQHRKP*RPGPWL
Trigger: GAGCCAGGGGCCCGGCCTCCAGGGTTTCCTGTGCTG...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTTCGCCGCTCTAGCAGGAGGGGTGAAATCAGACAGTaGGTACCGGCCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: VEWLSWTSLPTVRRSSRRGEIRQ*VPASQT
Trigger: GGTCTGGCTGGCCGGTACCCACTGTCTGATTTCACC...CCTCCTGCTAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGGTGAAATCAGACAGTaGGTACCGGCCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRGEIRQ*VPASQT
Trigger: GGTCTGGCTGGCCGGTACCCACTGTCTGATTTCACC...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCAGGGACCGCCTCGGTaGCAGAGCTCCAGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLQGPPR*QSSSVR
Trigger: GCGCACACTGGAGCTCTGCCACCGAGGCGGTCCCTG...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTCAGGGACCGCCTCGGTaGCAGAGCTCCAGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVQGPPR*QSSSVR
Trigger: GCGCACACTGGAGCTCTGCCACCGAGGCGGTCCCTG...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCCAAATAGACGTCAGTGCTCAGGGACCGCCTCGGTaGCAGAGCTCCAGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: QAEAKGSNLHGLQIDVSAQGPPR*QSSSVR
Trigger: GCGCACACTGGAGCTCTGCCACCGAGGCGGTCCCTG...AGCACTGACGTCTATTTGGAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGATGGGGACGTAGGGCTTaGCCTCGCCATCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ISLASALFTHHWVCGLRRWGRRA*PRHRAG
Trigger: TCCTGCCCGATGGCGAGGCCAAGCCCTACGTCCCCA...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCTGGGGACGTAGGGCTTaGCCTCGCCATCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFWGRRA*PRHRAG
Trigger: TCCTGCCCGATGGCGAGGCCAAGCCCTACGTCCCCA...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCAGCCCCTCCACCCCTaGCAGATTGTAAAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: VRLQGLPARRGAERLLKLQPLHP*QIVKPD
Trigger: GTCCGGCTTTACAATCTGCCAGGGGTGGAGGGGCTG...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGAGACACCCAGGGCCTaGGCAGTGTGCAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLETPRA*AVCSVR
Trigger: CCTCACGCTGCACACTGCCCAGGCCCTGGGTGTCTC...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp CAATCTCCATGGGCTCCAAATAGACGTCAGTGCTGTTGGACGGGGAGGCCAGAGCTGGGAGCTGCATCCTaGCTACAGGCAGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: QSPWAPNRRQCCWTGRPELGAAS*LQAERA
Trigger: CGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAG...CTCTGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGGAGCCCATGGAGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGCGCAGACCAGGGCCTaGGAGCTGCATCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYAQTRA*ELHPGY
Trigger: GTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCGTCGGGGCTGCACCCTaGCTGTCGATGTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATVGAAP*LSMSVW
Trigger: CCATACAGACATCGACAGCCAGGGTGCAGCCCCGAC...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 72 bp AGGAGGCGGAAACGGTTGCAGGTTCTCTTGTTGTCCTaGAGCCCTTGGCCTAGGCCCCGGTTGTCATCCTGC +
Preference number: 4 (lower is better)
Translates to: RRRKRLQVLLLS*SPWPRPRLSSC
Trigger: GCAGGATGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTGCGGTCTCCGCCGAGGGTAGGGTGTCCTCCTCAGCCTGGAGCGTACGTAGGACTTGTCAAAGGTCTTaGTCCAGCCTGGGTCATTGT +
Preference number: 4 (lower is better)
Translates to: SAVSAEGRVSSSAWSVRRTCQRS*SSLGHC
Trigger: ACAATGACCCAGGCTGGATCAAGACCTTTGACAAGT...CCTACGTACGCTCCAGGCTGAGGAGGACACCCTACCCTCGGCGGAGACCGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp AGCTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATGGAGCACCAGGCAGGCGTTTaGAATCAAATTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SCILATGRASAGAFRYMEHQAGV*NQIGSR
Trigger: TCTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTG...CTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGAGAGCCGTTGGTAGTTaGAGAACTGGGCATCCCACT +
Preference number: 4 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLRAVGS*RTGHPT
Trigger: AGTGGGATGCCCAGTTCTTCAACTACCAACGGCTCT...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTCTTCCGTCAGGAGGGTaGAATCAGACAGTGGGTACC +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRLPSGG*NQTVGT
Trigger: GGTACCCACTGTCTGATTTCACCCTCCTGACGGAAG...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGGGAGCGCAGAAGCCTaGCCCCATAGTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYGSAEA*PHSPPP
Trigger: TGGTGGTGGACTATGGGGTCAGGCTTCTGCGCTCCC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCGGGAGCGCAGAAGCCTaGCCCCATAGTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFGSAEA*PHSPPP
Trigger: TGGTGGTGGACTATGGGGTCAGGCTTCTGCGCTCCC...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCTGGGAGGGCGTCGTaGCTTAAGCGAGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: HAGQAALTAKPSQKAARPSGRAS*LKRVSS
Trigger: GGATGACACTCGCTTAAGTCACGACGCCCTCCCAGA...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCGCAGGGACACCATGCTaGATCGCTCCTGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSAGTPC*IAPVPV
Trigger: CACTGGAACAGGAGCGATTCAGCATGGTGTCCCTGC...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGCACGCGGGGAGAGTTaGCCAGCAGGGACACCATGC +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRARGES*PAGTPC
Trigger: GCATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGC...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACGCACGCGGGGAGAGTTaGCCAGCAGGGACACCATGC +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHARGES*PAGTPC
Trigger: GCATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGC...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTACGCTTCGTGCCTGCTaGCGGACAGCTGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCTLRAC*RTAAGR
Trigger: ACGGCCGGCAGCTGTCCGTCAGCAGGCACGAAGCGT...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGGCATGTAGCGGTTGCTaGGGGCGAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGACSGC*GRSRWC
Trigger: GCACCAGCGACTTCGCCCTCAGCAACCGCTACATGC...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCGGGCCAGCTCCTTGTTaGCGTAGTCCCGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVGPAPC*RSPGCP
Trigger: TGGACATCCGGGACTACGTCAACAAGGAGCTGGCCC...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAGGGCCAGCTCCTTGTTaGCGTAGTCCCGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPGPAPC*RSPGCP
Trigger: TGGACATCCGGGACTACGTCAACAAGGAGCTGGCCC...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGGGGCCAGCTCCTTGTTaGCGTAGTCCCGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGGPAPC*RSPGCP
Trigger: TGGACATCCGGGACTACGTCAACAAGGAGCTGGCCC...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGGGCAGTGTGCAGCGTaGGGCGCTTCTGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYGQCAA*GASVRP
Trigger: AGGACGCACAGAAGCGCCTCACGCTGCACACTGCCC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTGGGCAGTGTGCAGCGTaGGGCGCTTCTGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVGQCAA*GASVRP
Trigger: AGGACGCACAGAAGCGCCTCACGCTGCACACTGCCC...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCGGAGCGTACGTAGGTTaGGCAGGTGGAAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATGAYVG*AGGSHR
Trigger: CCTGTGACTTCCACCTGCTCAACCTACGTACGCTCC...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTACCTTGCGGTGTAAGATaGGTGCGGTCTCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLPCGVR*VRSPPR
Trigger: CCTCGGCGGAGACCGCACTCATCTTACACCGCAAGG...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGGCTTGTGGTGCAGTTaGAGCCCAAGTTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRGLWCS*SPSSWP
Trigger: AGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCC...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGGCGGGCGGGCCCTCTaGGTTGGCTGTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINGGRAL*VGCQLQ
Trigger: CTGGAGCTGACAGCCAACGCAGAGGGCCCGCCCGCC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGGCGGCGAGCGTGAGCTaGAGCCAGGCTGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMAASVS*SQAVQN
Trigger: GTTCTGTACAGCCTGGCTGCAGCTCACGCTCGCCGC...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGGGAAGAGCCCCAATGTaGGCCGAGCTTCCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGGRAPM*AELPSG
Trigger: TCCTGACGGAAGCTCGGCGCACATTGGGGCTCTTCC...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTCCAGCTGGATCACCGTaGGCTCTGGGAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVPAGSP*ALGGRR
Trigger: ACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGG...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGAGGGCAGCGTGCGGTaGCCATCCAGGCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLEGSVR*PSRPSC
Trigger: ACAGCTGGGCCTGGATGGGCACCGCACGCTGCCCTC...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGAGAGGAAACGCTTCGTaGCTGCTGACGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVRGNAS*LLTDSC
Trigger: GCAGCTGTCCGTCAGCAGGCACGAAGCGTTTCCTCT...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGCGTGAGGCGCTTCTGTaGGTCCTGGATATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LPARRGAERLLKLPKHMEREALL*VLDIGH
Trigger: ATGGCCTATATCCAGGACGCACAGAAGCGCCTCACG...CTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTGGAGGCGGAAACGGTTaGAGGTTCTCTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGLGPGCHPASAAGPRSPGGGNG*RFSCCP
Trigger: AGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCC...AGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGCCAGGGCCTGGGAGCTaGATCCTGGCTACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMPGPGS*ILATGR
Trigger: TCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGG...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCGATCTCACTGGCGTCTaGCCTATTTACCCATCACTG +
Preference number: 4 (lower is better)
Translates to: PRPRLSSCISRRSKITSSDLTGV*PIYPSL
Trigger: CAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCGGGTGCCTGAGCCTGTaGCCAGTTGGGTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTGCLSL*PVGCPL
Trigger: GAGTGGACACCCAACTGGGCACAGGCTCAGGCACCC...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGCGGGCCCTCTGCGTTaGCTGTCAGCTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAAGPLR*LSAPAR
Trigger: CCGTGCTGGAGCTGACAGCCAACGCAGAGGGCCCGC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCAAGATGGAGAAGAAGCTaGGCCGGGGCTCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAARWRRS*AGAPVA
Trigger: TGCCACCGGAGCCCCGGCCCAGCTTCTTCTCCATCT...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGTGTTGTCCCACCACTTaGCGAAGAAGGAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLCCPTT*RRRRPL
Trigger: CAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACA...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTGCAGGTAAGGCATGGTaGAGCTGTATCCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LGLGPGCHPASAAGPRSPAGKAW*SCIQRG
Trigger: ACCCCTTTGGATACAGCTCCACCATGCCTTACCTGC...AGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCATGAACTCTAGGCTGTaGGTGGCAGCAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PWPRPRLSSCISRRSKITMNSRL*VAAKCF
Trigger: GAAGCACTTTGCTGCCACCCACAGCCTAGAGTTCAT...GGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTGCAGATCTTGGGATCTaGGCCACAGGTATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: HAGQAALTAKPSQKAARPADLGI*ATGMGD
Trigger: GTCCCCCATACCTGTGGCCCAGATCCCAAGATCTGC...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTTGTGATGGCCCGGGGTaGCACCTTCCAAGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFCDGPG*HLPRAV
Trigger: AACTGCCCTTGGAAGGTGCCACCCCGGGCCATCACA...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCATGTGATGGCCCGGGGTaGCACCTTCCAAGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPCDGPG*HLPRAV
Trigger: AACTGCCCTTGGAAGGTGCCACCCCGGGCCATCACA...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTCAGGGACCGCCTCGGTaGCAGAGCTCCAGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCQGPPR*QSSSVR
Trigger: GCGCACACTGGAGCTCTGCCACCGAGGCGGTCCCTG...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTTGGGGACGTAGGGCTTaGCCTCGCCATCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLWGRRA*PRHRAG
Trigger: TCCTGCCCGATGGCGAGGCCAAGCCCTACGTCCCCA...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATCAGCCCCTCCACCCCTaGCAGATTGTAAAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: NEGRAQCVTVLGGRSGWDQPLHP*QIVKPD
Trigger: GTCCGGCTTTACAATCTGCCAGGGGTGGAGGGGCTG...ATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGCGCAGACCAGGGCCTaGGAGCTGCATCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYAQTRA*ELHPGY
Trigger: GTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGCGCAGACCAGGGCCTaGGAGCTGCATCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GTYCKAITESSEAFRLLGAQTRA*ELHPGY
Trigger: GTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGC...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTCGTAGGTTGAGCAGGTaGAAGTCACAGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRRRLSR*KSQGSE
Trigger: CTCACTGCCCTGTGACTTCCACCTGCTCAACCTACG...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCGTGTCCTCCTCAGCCTaGAGCGTACGTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSVSSSA*SVRRLS
Trigger: GCTCAACCTACGTACGCTCCAGGCTGAGGAGGACAC...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: HAGQAALTAKPSQKAARPGGRSG*DTRVAC
Trigger: ACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGCCATCACTGGGTTTGTaGGTTGCGCCGAAAACACAG +
Preference number: 4 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPPSLGL*VAPKTQ
Trigger: CTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGG...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCCTATTTACCCATCACTaGGTTTGTGGGTTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: PRPRLSSCISRRSKITSSLFTHH*VCGLRR
Trigger: TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAG...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCGAGCCTGTGCCCAGTTaGGTGTCCACTCACAACCCA +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATEPVPS*VSTHNP
Trigger: TGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTC...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCGAGCCTGTGCCCAGTTaGGTGTCCACTCACAACCCA +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSEPVPS*VSTHNP
Trigger: TGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTC...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGCACTCGGTCCAGCATaGGGTAGAGCGAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFALGPA*GRARRL
Trigger: CAGTCTTCTCGCTCTACCTCATGCTGGACCGAGTGC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCGCTCCTCCGACACAGTaGGCATCTGCAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSAPPTQ*ASAALA
Trigger: AGCCAGAGCTGCAGATGCTCACTGTGTCGGAGGAGC...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCCAGCAAAGTGCTTCTTaGTGGCATAGTGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: PWPRPRLSSCISRRSKITQQSAS*WHSALS
Trigger: AGAGAGTGCACTATGCCATCAAGAAGCACTTTGCTG...GGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCAATGTCTGCCTCCACATaGACTCTAGGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQREFRQGEGPHTPATIPMSAST*TLGCGW
Trigger: CCACCCACAGCCTAGAGTTCATGTGGAGGCAGACAT...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTCCTTCCAAGGGCAGTTaGTGCGCCCACCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAPSKGS*CAHQAG
Trigger: GCCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGG...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCCAGAGCGGCGAGCGTaGGCTGCAGCCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRPERRA*AAARLY
Trigger: GTACAGCCTGGCTGCAGCTCACGCTCGCCGCTCTGG...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCACTTCCGTCAGGAGGGTaGAATCAGACAGTGGGTACC +
Preference number: 4 (lower is better)
Translates to: SQREFRQGEGPHTPATIPLPSGG*NQTVGT
Trigger: GGTACCCACTGTCTGATTTCACCCTCCTGACGGAAG...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGCCAGTGATGGCATCGTaGTGCTGGAAGAGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVPVMAS*CWKSPN
Trigger: ATTGGGGCTCTTCCAGCATCACGATGCCATCACTGG...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCTTGGCCGTGCCAGTaGTGGCATCGTGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYPWPCQ*WHRDAG
Trigger: TCCAGCATCACGATGCCATCACTGGCACGGCCAAGG...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGCAGGGACACCATGCTaGATCGCTCCTGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFAGTPC*IAPVPV
Trigger: CACTGGAACAGGAGCGATTCAGCATGGTGTCCCTGC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGCACGCGGGGAGAGTTaGCCAGCAGGGACACCATGC +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLARGES*PAGTPC
Trigger: GCATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGC...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTATGCACGGCCAGGGGCTaGCCCTCCTCCGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLCTARG*PSSERT
Trigger: TGTCCTTTCGGAGGAGGGTCAGCCCCTGGCCGTGCA...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAAGCTCCAGTGTGCGCTaGTCTGCACGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGSSSVR*SARPGA
Trigger: AGCCCCTGGCCGTGCAGATCAGCGCACACTGGAGCT...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGAGCTCCAGTGTGCGCTaGTCTGCACGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVSSSVR*SARPGA
Trigger: AGCCCCTGGCCGTGCAGATCAGCGCACACTGGAGCT...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACACGCTTCGTGCCTGCTaGCGGACAGCTGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINTLRAC*RTAAGR
Trigger: ACGGCCGGCAGCTGTCCGTCAGCAGGCACGAAGCGT...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGCATGTAGCGGTTGCTaGGGGCGAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYACSGC*GRSRWC
Trigger: GCACCAGCGACTTCGCCCTCAGCAACCGCTACATGC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCGGGCCAGCTCCTTGTTaGCGTAGTCCCGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTGPAPC*RSPGCP
Trigger: TGGACATCCGGGACTACGTCAACAAGGAGCTGGCCC...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGGGCCAGCTCCTTGTTaGCGTAGTCCCGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYGPAPC*RSPGCP
Trigger: TGGACATCCGGGACTACGTCAACAAGGAGCTGGCCC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGGGCAGTGTGCAGCGTaGGGCGCTTCTGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAGQCAA*GASVRP
Trigger: AGGACGCACAGAAGCGCCTCACGCTGCACACTGCCC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGTGGAGGTCAGGTGGCTaGGGAGGGATGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLWRSGG*GGMGSW
Trigger: CCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCA...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCGAGGAAGCCAGAGGATaGAATGAGCGCAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVEEARG*NERRPG
Trigger: CCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTC...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGGAGCGTACGTAGGTTaGGCAGGTGGAAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFGAYVG*AGGSHR
Trigger: CCTGTGACTTCCACCTGCTCAACCTACGTACGCTCC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCCTTGCGGTGTAAGATaGGTGCGGTCTCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLPCGVR*VRSPPR
Trigger: CCTCGGCGGAGACCGCACTCATCTTACACCGCAAGG...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCCTTGCGGTGTAAGATaGGTGCGGTCTCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQPCGVR*VRSPPR
Trigger: CCTCGGCGGAGACCGCACTCATCTTACACCGCAAGG...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATTGGCACTGCCCACTCTaGCCAAGGGCCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHWHCPL*PRAFSP
Trigger: GGGAGAGAAGGCCCTTGGTCAGAGTGGGCAGTGCCA...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAAAAAAGGATGGGTGCCTaGGCCTGTGCCCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VSQFWEADRDGIPVWLVQKRMGA*ACAQLG
Trigger: ACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTT...TTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGAAAAGGATGGGTGCCTaGGCCTGTGCCCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGKRMGA*ACAQLG
Trigger: ACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTT...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGCGGGTGGGATCGTGTTaGACTCGGTCCAGCATGAGG +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGRVGSC*TRSSMR
Trigger: CCTCATGCTGGACCGAGTGCAACACGATCCCACCCG...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTTTCTCCTCCAAAAGCTaGTCCAGCTGCTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRFSSKS*SSCSMR
Trigger: CCGCATTGAGCAGCTGGAGCAGCTTTTGGAGGAGAA...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGGAGATGTCGAAGCCTTaGCTCCACACACCACCATCC +
Preference number: 4 (lower is better)
Translates to: VRLQGLPARRGAERLLKLEMSKP*LHTPPS
Trigger: GGATGGTGGTGTGTGGAGGCAAGGCTTCGACATCTC...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGGAAGAAGGAGACCTCTaGCCAGAGGAAGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQEEGDL*PEEAPP
Trigger: CGGCGGCGCTTCCTCTGGGCAGAGGTCTCCTTCTTC...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGAAGAAGGAGACCTCTaGCCAGAGGAAGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYEEGDL*PEEAPP
Trigger: CGGCGGCGCTTCCTCTGGGCAGAGGTCTCCTTCTTC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGCGGCGAGCGTGAGCTaGAGCCAGGCTGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYAASVS*SQAVQN
Trigger: GTTCTGTACAGCCTGGCTGCAGCTCACGCTCGCCGC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGCGGCGAGCGTGAGCTaGAGCCAGGCTGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRAASVS*SQAVQN
Trigger: GTTCTGTACAGCCTGGCTGCAGCTCACGCTCGCCGC...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGGCGGCGAGCGTGAGCTaGAGCCAGGCTGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQAASVS*SQAVQN
Trigger: GTTCTGTACAGCCTGGCTGCAGCTCACGCTCGCCGC...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGCGGCGAGCGTGAGCTaGAGCCAGGCTGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: GTYCKAITESSEAFRLLGAASVS*SQAVQN
Trigger: GTTCTGTACAGCCTGGCTGCAGCTCACGCTCGCCGC...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAACCAGCTGGATCACCGTaGGCTCTGGGAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQPAGSP*ALGGRR
Trigger: ACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGG...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGGCAGAGCTCCAGTGTaGGCTGATCTGCACGGCCAG +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRGRAPV*ADLHGQ
Trigger: CTGGCCGTGCAGATCAGCGCACACTGGAGCTCTGCC...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGCAGAGCTCCAGTGTaGGCTGATCTGCACGGCCAG +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQAGRAPV*ADLHGQ
Trigger: CTGGCCGTGCAGATCAGCGCACACTGGAGCTCTGCC...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCAGAGGAAACGCTTCGTaGCTGCTGACGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVRGNAS*LLTDSC
Trigger: GCAGCTGTCCGTCAGCAGGCACGAAGCGTTTCCTCT...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTCGTGAGGCGCTTCTGTaGGTCCTGGATATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIREALL*VLDIGH
Trigger: ATGGCCTATATCCAGGACGCACAGAAGCGCCTCACG...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCCGTGAGGCGCTTCTGTaGGTCCTGGATATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATREALL*VLDIGH
Trigger: ATGGCCTATATCCAGGACGCACAGAAGCGCCTCACG...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGGGCCTGGGCAGTGTaGAGCGTGAGGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVRAWAV*SVRRFC
Trigger: ACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCT...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGAGGGCCTGGGCAGTGTaGAGCGTGAGGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQRAWAV*SVRRFC
Trigger: ACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCT...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTAGGGCCTGGGCAGTGTaGAGCGTGAGGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLRAWAV*SVRRFC
Trigger: ACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCT...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATCCCCGGTTGTCATCCTaGATCAGCCGCCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHPRLSS*ISRRSK
Trigger: CTTGGACCGGCGGCTGATGCAGGATGACAACCGGGG...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACCCCCGGTTGTCATCCTaGATCAGCCGCCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYPRLSS*ISRRSK
Trigger: CTTGGACCGGCGGCTGATGCAGGATGACAACCGGGG...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTTATCTTGGACCTCACTaGCCACGGTTCGCCGCTCTA +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSYLGPH*PRFAAL
Trigger: TAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATA...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATCCAGGGCCTGGGAGCTaGATCCTGGCTACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHPGPGS*ILATGR
Trigger: TCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGG...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACCCAGGGCCTGGGAGCTaGATCCTGGCTACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYPGPGS*ILATGR
Trigger: TCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGG...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAGGCCATGGAAAAGGCTaGCCAGGGCTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPGHGKG*PGLPCL
Trigger: AAGGCAAGGTAGCCCTGGGCAGCCTTTTCCATGGCC...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCGATTCCCCTAGAGCCTaGTGTTGCCACAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSDSPRA*CCHSDP
Trigger: AGGGTCACTGTGGCAACAGCAGGCTCTAGGGGAATC...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCCTGTTAGCCAATGCATaGAGGCCAGGCGGCACTTAC +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATLLANA*RPGGTY
Trigger: GTAAGTGCCGCCTGGCCTGCATGCATTGGCTAACAG...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCACAGCCTGTTAGCCAATaGATGCAGGCCAGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAQPVSQ*MQARRH
Trigger: GTGCCGCCTGGCCTGCATGCATTGGCTAACAGGCTG...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCCCTGCACAGCCATACTaGCTCCTCATATACTCTACA +
Preference number: 4 (lower is better)
Translates to: PRPRLSSCISRRSKITSSPAQPY*LLIYST
Trigger: TGTAGAGTATATGAGGAGGCAGTATGGCTGTGCAGG...GCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTGCCACACAGAAGATaGCAGCCCCACACACTGTCA +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSLPHRR*QPHTLS
Trigger: TGACAGTGTGTGGGGCTGCCATCTTCTGTGTGGCAG...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCGGTCTTGATCCAGCCTaGGTCATTGTGAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSGLDPA*VIVRVG
Trigger: CCCCACTCTCACAATGACCCAGGCTGGATCAAGACC...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACTGTGATGGCCCGGGGTaGCACCTTCCAAGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENCDGPG*HLPRAV
Trigger: AACTGCCCTTGGAAGGTGCCACCCCGGGCCATCACA...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGACGAGTGTCATCCACTTaGAGGAAGGGCGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ISLASALFTHHWVCGLRRRVSST*RKGASG
Trigger: CCCTGAGGCGCCCTTCCTCCAAGTGGATGACACTCG...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCAGCCCCTCCACCCCTaGCAGATTGTAAAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTQPLHP*QIVKPD
Trigger: GTCCGGCTTTACAATCTGCCAGGGGTGGAGGGGCTG...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGGCATGGGGTAGAAGTTaGCCTGGAGGGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGAWGRS*PGGGAS
Trigger: AGAAGCTCCCCCTCCAGGCCAACTTCTACCCCATGC...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGCATGGGGTAGAAGTTaGCCTGGAGGGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFAWGRS*PGGGAS
Trigger: AGAAGCTCCCCCTCCAGGCCAACTTCTACCCCATGC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGAGACACCCAGGGCCTaGGCAGTGTGCAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLETPRA*AVCSVR
Trigger: CCTCACGCTGCACACTGCCCAGGCCCTGGGTGTCTC...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAAGAGACACCCAGGGCCTaGGCAGTGTGCAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQETPRA*AVCSVR
Trigger: CCTCACGCTGCACACTGCCCAGGCCCTGGGTGTCTC...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGGAGACACCCAGGGCCTaGGCAGTGTGCAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVETPRA*AVCSVR
Trigger: CCTCACGCTGCACACTGCCCAGGCCCTGGGTGTCTC...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTTGTCCTTGAGCCCTTaGCCTAGGCCCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSLSLSP*PRPRLS
Trigger: TGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAA...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACTGGGAGCTGCATCCTaGCTACAGGCAGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAELGAAS*LQAERA
Trigger: CGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAG...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCCTGGGAGCTGCATCCTaGCTACAGGCAGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTLGAAS*LQAERA
Trigger: CGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAG...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAGCGCAGACCAGGGCCTaGGAGCTGCATCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGAQTRA*ELHPGY
Trigger: GTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGC...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCAGACGTCAGTGCTGTTaGACGGGGAGGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFRRQCC*TGRPEG
Trigger: ACCCTCTGGCCTCCCCGTCCAACAGCACTGACGTCT...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGACGTCAGTGCTGTTaGACGGGGAGGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSRRQCC*TGRPEG
Trigger: ACCCTCTGGCCTCCCCGTCCAACAGCACTGACGTCT...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGGGRSG*DTRVAC
Trigger: ACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSSVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPISVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTACTCTTGTCTTTAGGTaGCAGCTTGGCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HAGQAALTAKPSQKAARPTLVFR*QLGRPQ
Trigger: CTGGGGCCTGCCAAGCTGCCACCTAAAGACAAGAGT...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR CAA 72 bp TCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGTaGTCCTTGAGCCCTTGGCCTAGGCCCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SSRRRKRLQVLL*SLSPWPRPRLS
Trigger: TGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGCTCCTCCGACACAGTaGGCATCTGCAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTAPPTQ*ASAALA
Trigger: AGCCAGAGCTGCAGATGCTCACTGTGTCGGAGGAGC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAATCAGCATGCTGGTaGGGTTGGCACGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTYCKAITESSEAFRLLGESACW*GWHGAA
Trigger: TGCTGCGCCGTGCCAACCTCACCAGCATGCTGATTC...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGGAATCAGCATGCTGGTaGGGTTGGCACGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQESACW*GWHGAA
Trigger: TGCTGCGCCGTGCCAACCTCACCAGCATGCTGATTC...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAACCTTCCAAGGGCAGTTaGTGCGCCCACCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGEPSKGS*CAHQAG
Trigger: GCCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGG...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCACTTCCGTCAGGAGGGTaGAATCAGACAGTGGGTACC +
Preference number: 4 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPLPSGG*NQTVGT
Trigger: GGTACCCACTGTCTGATTTCACCCTCCTGACGGAAG...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCCTTGGCCGTGCCAGTaGTGGCATCGTGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQPWPCQ*WHRDAG
Trigger: TCCAGCATCACGATGCCATCACTGGCACGGCCAAGG...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGCCTTGGCCGTGCCAGTaGTGGCATCGTGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQPWPCQ*WHRDAG
Trigger: TCCAGCATCACGATGCCATCACTGGCACGGCCAAGG...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGAGGGAGCGCAGAAGCCTaGCCCCATAGTCCACCACCA +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRGSAEA*PHSPPP
Trigger: TGGTGGTGGACTATGGGGTCAGGCTTCTGCGCTCCC...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACGCAGGGACACCATGCTaGATCGCTCCTGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENAGTPC*IAPVPV
Trigger: CACTGGAACAGGAGCGATTCAGCATGGTGTCCCTGC...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGTGCACGGCCAGGGGCTaGCCCTCCTCCGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRCTARG*PSSERT
Trigger: TGTCCTTTCGGAGGAGGGTCAGCCCCTGGCCGTGCA...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACTGCACGGCCAGGGGCTaGCCCTCCTCCGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINCTARG*PSSERT
Trigger: TGTCCTTTCGGAGGAGGGTCAGCCCCTGGCCGTGCA...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGAGCTCCAGTGTGCGCTaGTCTGCACGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRSSSVR*SARPGA
Trigger: AGCCCCTGGCCGTGCAGATCAGCGCACACTGGAGCT...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTTGGTGCCAGAGTCAATaGCACGGAGAGGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSWCQSQ*HGEETL
Trigger: AAGCGTTTCCTCTCCGTGTCATTGACTCTGGCACCA...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAGCATGTAGCGGTTGCTaGGGGCGAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGACSGC*GRSRWC
Trigger: GCACCAGCGACTTCGCCCTCAGCAACCGCTACATGC...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGAGCATGTAGCGGTTGCTaGGGGCGAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRACSGC*GRSRWC
Trigger: GCACCAGCGACTTCGCCCTCAGCAACCGCTACATGC...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGAGCCCAGTAAGGCCTaGGAACCAGACCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFEPSKA*EPDLHV
Trigger: TACATGCAGGTCTGGTTCTCAGGCCTTACTGGGCTC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATGGAGGTCAGGTGGCTaGGGAGGGATGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQWRSGG*GGMGSW
Trigger: CCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCA...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCAGAGGAAGCCAGAGGATaGAATGAGCGCAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAEEARG*NERRPG
Trigger: CCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTC...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TGTGGTGCAGTTGAAGCCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTTGAGGAAGCCAGAGGATaGAATGAGCGCAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: CGAVEAQVLGLQAAVKTLEEARG*NERRPG
Trigger: CCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTC...AAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGAGGAAGCCAGAGGATaGAATGAGCGCAGACCAGGG +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLEEARG*NERRPG
Trigger: CCCTGGTCTGCGCTCATTTCATCCTCTGGCTTCCTC...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCGGAGCGTACGTAGGTTaGGCAGGTGGAAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSGAYVG*AGGSHR
Trigger: CCTGTGACTTCCACCTGCTCAACCTACGTACGCTCC...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSVKEVG*RNTTSR
Trigger: CCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGAC...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGGCAATAAACAGAAAATaGGGGCAGAGCCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLAINRK*GQSPVC
Trigger: ACACACTGGGCTCTGCCCTCATTTTCTGTTTATTGC...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGATGGCACTGCCCACTCTaGCCAAGGGCCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGWHCPL*PRAFSP
Trigger: GGGAGAGAAGGCCCTTGGTCAGAGTGGGCAGTGCCA...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATGGCACTGCCCACTCTaGCCAAGGGCCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQWHCPL*PRAFSP
Trigger: GGGAGAGAAGGCCCTTGGTCAGAGTGGGCAGTGCCA...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCACTCTCCCGTCTGTCTaGCCCCCTCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTTLPSV*PPPGHT
Trigger: AGTGTGACCTGGAGGGGGTCAGACAGACGGGAGAGT...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGCTCCGCCTCCCAGGTTaGTGTGATTCTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMLRLPG*CDSPAS
Trigger: TGAGGCAGGAGAATCACATCAACCTGGGAGGCGGAG...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGCTCCGCCTCCCAGGTTaGTGTGATTCTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGLRLPG*CDSPAS
Trigger: TGAGGCAGGAGAATCACATCAACCTGGGAGGCGGAG...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTACTTGGCAGGCCCCAGTaGCTTTCTCTAAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLLGRPQ*LSLRTL
Trigger: CAGGGTCCTTAGAGAAAGTCACTGGGGCCTGCCAAG...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCAGCTCCAGCTGCTCAATaGGGTTCTGCAGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: SQREFRQGEGPHTPATIPAPAAQ*GSAAQK
Trigger: TTTCTGTGCTGCAGAACCGCATTGAGCAGCTGGAGC...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTAAAAGCTGCTCCAGCTaGTCAATGCGGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIKSCSS*SMRFCS
Trigger: GCTGCAGAACCGCATTGAGCAGCTGGAGCAGCTTTT...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCGCCGGGGGTCCTCCTaGAGCTTAGACACCATGCTA +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFRRGSS*SLDTML
Trigger: TAGCATGGTGTCTAAGCTGCAGGAGGACCCCCGGCG...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCGTCGCAATCTCCAGCTaGCCGTTTCCCACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSVAISS*PFPTSL
Trigger: AAGGCTGGTGGGAAACGGGCAGCTGGAGATTGCGAC...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCTCCGAGTCCCATGTCTaGCTCCACATGAACTCTAGG +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSSESHV*LHMNSR
Trigger: CCTAGAGTTCATGTGGAGGCAGACATGGGACTCGGA...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTGACAGAAGATGTCTGTaGTGGAGTCCGAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIDRRCL*WSPSPM
Trigger: CATGGGACTCGGACTCCAGCACAGACATCTTCTGTC...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGGAAGAGCCCCAATGTaGGCCGAGCTTCCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYGRAPM*AELPSG
Trigger: TCCTGACGGAAGCTCGGCGCACATTGGGGCTCTTCC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTCCAGCTGGATCACCGTaGGCTCTGGGAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSPAGSP*ALGGRR
Trigger: ACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGG...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTCAGAGGAGGGCAGCGTaGGGTGCCCATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCQRRAA*GAHPGP
Trigger: TGGGCCTGGATGGGCACCGCACGCTGCCCTCCTCTG...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAATCCACCTGCTGCTCGTaGTCCTCATCCACCCTTCGG +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAESTCCS*SSSTLR
Trigger: CCGAAGGGTGGATGAGGAGCACGAGCAGCAGGTGGA...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGCTTTGGACGTACGGGTaGCATAGACAAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVLWTYG*HRQGPA
Trigger: TGCAGGTCCTTGTCTATGGCACCCGTACGTCCAAAG...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTATGTCTGTATGGATGTaGAGGGCCAGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRMSVWM*RASSLL
Trigger: CAACAAGGAGCTGGCCCTGCACATCCATACAGACAT...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGACCCCGGTTGTCATCCTaGATCAGCCGCCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRPRLSS*ISRRSK
Trigger: CTTGGACCGGCGGCTGATGCAGGATGACAACCGGGG...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAGGCCATGGAAAAGGCTaGCCAGGGCTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ISLASALFTHHWVCGLRRGHGKG*PGLPCL
Trigger: AAGGCAAGGTAGCCCTGGGCAGCCTTTTCCATGGCC...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTACTGGGTTTGTGGGTTaGGCCGAAAACACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HAGQAALTAKPSQKAARPTGFVG*AENTAA
Trigger: TGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGT...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCAACTGGGTTTGTGGGTTaGGCCGAAAACACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQREFRQGEGPHTPATIPTGFVG*AENTAA
Trigger: TGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGT...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAGGGTGCCTGAGCCTGTaGCCAGTTGGGTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGGCLSL*PVGCPL
Trigger: GAGTGGACACCCAACTGGGCACAGGCTCAGGCACCC...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTCAGCCTGTTAGCCAATaGATGCAGGCCAGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVQPVSQ*MQARRH
Trigger: GTGCCGCCTGGCCTGCATGCATTGGCTAACAGGCTG...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCAGCCAAGTGCCCAGTTTaGCAGGGGTCTTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAAKCPV*QGSCYL
Trigger: CAGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGC...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGGCCCCTAGTCCCCTGTaGCAGGAACTGAATACCTCT +
Preference number: 4 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPAPSPL*QELNTS
Trigger: AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGC...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGCCTCCACACACACCTaGTCAGGAGGAAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYASTHT*SGGRRT
Trigger: CGTCCTCCTTCCTCCTGAGCAGGTGTGTGTGGAGGC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559717.6
CDS-3UTR CCA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCACTGCCACACAGAAGATaGCAGCCCCACACACTGTCA +
Preference number: 4 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPLPHRR*QPHTLS
Trigger: TGACAGTGTGTGGGGCTGCCATCTTCTGTGTGGCAG...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTCTGCCACACAGAAGATaGCAGCCCCACACACTGTCA +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFLPHRR*QPHTLS
Trigger: TGACAGTGTGTGGGGCTGCCATCTTCTGTGTGGCAG...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTGGCTGATAATCTCATaGTTCTCCTCCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PWPRPRLSSCISRRSKITWLIIS*FSSKSC
Trigger: GCAGCTTTTGGAGGAGAACCATGAGATTATCAGCCA...GGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTAGATGGAGAAGAAGCTaGGCCGGGGCTCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSRWRRS*AGAPVA
Trigger: TGCCACCGGAGCCCCGGCCCAGCTTCTTCTCCATCT...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCGGTCTTGATCCAGCCTaGGTCATTGTGAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVGLDPA*VIVRVG
Trigger: CCCCACTCTCACAATGACCCAGGCTGGATCAAGACC...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCGCAGCAGGTAAGGCATaGTGGAGCTGTATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSAAGKA*WSCIQR
Trigger: CCTTTGGATACAGCTCCACCATGCCTTACCTGCTGC...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGGCAGCAGGTAAGGCATaGTGGAGCTGTATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VRLQGLPARRGAERLLKLAAGKA*WSCIQR
Trigger: CCTTTGGATACAGCTCCACCATGCCTTACCTGCTGC...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCGCAGATCTTGGGATCTaGGCCACAGGTATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFADLGI*ATGMGD
Trigger: GTCCCCCATACCTGTGGCCCAGATCCCAAGATCTGC...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACTGTGATGGCCCGGGGTaGCACCTTCCAAGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYCDGPG*HLPRAV
Trigger: AACTGCCCTTGGAAGGTGCCACCCCGGGCCATCACA...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCAACTGGGCCTGCACATaGAGGTTAGGCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PQEALTQAEAKGSNLHGLNWACT*RLGLLL
Trigger: CAACAGCAGGCCTAACCTCCATGTGCAGGCCCAGTT...GAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCGGTGAAATCAGACAGTaGGTACCGGCCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFGEIRQ*VPASQT
Trigger: GGTCTGGCTGGCCGGTACCCACTGTCTGATTTCACC...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGAGTGTCATCCACTTaGAGGAAGGGCGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAERVSST*RKGASG
Trigger: CCCTGAGGCGCCCTTCCTCCAAGTGGATGACACTCG...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCTGGGGACGTAGGGCTTaGCCTCGCCATCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCWGRRA*PRHRAG
Trigger: TCCTGCCCGATGGCGAGGCCAAGCCCTACGTCCCCA...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATCTGTCGATGTCTGTATaGATGTGCAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NEGRAQCVTVLGGRSGWDLSMSV*MCRASS
Trigger: GGAGCTGGCCCTGCACATCCATACAGACATCGACAG...ATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCCTGTCGATGTCTGTATaGATGTGCAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSLSMSV*MCRASS
Trigger: GGAGCTGGCCCTGCACATCCATACAGACATCGACAG...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGCATGGGGTAGAAGTTaGCCTGGAGGGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLAWGRS*PGGGAS
Trigger: AGAAGCTCCCCCTCCAGGCCAACTTCTACCCCATGC...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGGAGACACCCAGGGCCTaGGCAGTGTGCAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRETPRA*AVCSVR
Trigger: CCTCACGCTGCACACTGCCCAGGCCCTGGGTGTCTC...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCTTGTCCTTGAGCCCTTaGCCTAGGCCCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFLSLSP*PRPRLS
Trigger: TGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAA...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLVAEEG*VAGRVA
Trigger: AGCCACTCTACCAGCTACCCATCCCTCCTCAGCCAC...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCGCGCAGACCAGGGCCTaGGAGCTGCATCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCAQTRA*ELHPGY
Trigger: GTAGCCAGGATGCAGCTCCCAGGCCCTGGTCTGCGC...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTAGACGTCAGTGCTGTTaGACGGGGAGGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLRRQCC*TGRPEG
Trigger: ACCCTCTGGCCTCCCCGTCCAACAGCACTGACGTCT...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCAGACGTCAGTGCTGTTaGACGGGGAGGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTRRQCC*TGRPEG
Trigger: ACCCTCTGGCCTCCCCGTCCAACAGCACTGACGTCT...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp CTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGCTATTTACCCATCACTaGGTTTGTGGGTTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: LPARRGAERLLKLPKHMELFTHH*VCGLRR
Trigger: TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAG...CTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCAGCTGCCCAAGCACATaGAGTCTTGGAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: HRSQREFRQGEGPHTPATSCPST*SLGGFP
Trigger: AGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCT...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATAGCCTCCTAAGTAACTaGGATTACAGGCGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: NEGRAQCVTVLGGRSGWDSLLSN*DYRRAP
Trigger: TGGCGCGCGCCTGTAATCCCAGTTACTTAGGAGGCT...ATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR CAA 72 bp TTGCCTTGGCTTGTGGTGCAGTTGAAGCCCAAGTTCTaGGCCTCCAGGCCGCAGTCAAAACCCTTGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LPWLVVQLKPKF*ASRPQSKPLRC
Trigger: ACACCGCAAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCCAAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATGCACTCGGTCCAGCATaGGGTAGAGCGAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHALGPA*GRARRL
Trigger: CAGTCTTCTCGCTCTACCTCATGCTGGACCGAGTGC...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGCCACCCAGGAGCCATTaGCCGTGTAGTAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVPPRSH*PCSRAA
Trigger: TGCTGCCCTACTACACGGTCAATGGCTCCTGGGTGG...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGAGCTCCTCCGACACAGTaGGCATCTGCAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRAPPTQ*ASAALA
Trigger: AGCCAGAGCTGCAGATGCTCACTGTGTCGGAGGAGC...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGCTCCTCCGACACAGTaGGCATCTGCAGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCAPPTQ*ASAALA
Trigger: AGCCAGAGCTGCAGATGCTCACTGTGTCGGAGGAGC...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTACTTGTCAAAGGTCTTaGTCCAGCCTGGGTCATTGT +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRTCQRS*SSLGHC
Trigger: ACAATGACCCAGGCTGGATCAAGACCTTTGACAAGT...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTCTCTCTTTTGGACATTaGTGTTGTCCCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRLSFGH*CCPTTW
Trigger: CCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAG...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGAGAATCAGCATGCTGGTaGGGTTGGCACGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRESACW*GWHGAA
Trigger: TGCTGCGCCGTGCCAACCTCACCAGCATGCTGATTC...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAGAGCCGTTGGTAGTTaGAGAACTGGGCATCCCACT +
Preference number: 4 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPRAVGS*RTGHPT
Trigger: AGTGGGATGCCCAGTTCTTCAACTACCAACGGCTCT...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGACCAGAGCGGCGAGCGTaGGCTGCAGCCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRPERRA*AAARLY
Trigger: GTACAGCCTGGCTGCAGCTCACGCTCGCCGCTCTGG...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGCCAGTGATGGCATCGTaGTGCTGGAAGAGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMPVMAS*CWKSPN
Trigger: ATTGGGGCTCTTCCAGCATCACGATGCCATCACTGG...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTCCTTGGCCGTGCCAGTaGTGGCATCGTGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCPWPCQ*WHRDAG
Trigger: TCCAGCATCACGATGCCATCACTGGCACGGCCAAGG...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGACCTTGGCCGTGCCAGTaGTGGCATCGTGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRPWPCQ*WHRDAG
Trigger: TCCAGCATCACGATGCCATCACTGGCACGGCCAAGG...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGATCTGGGAGGGCGTCGTaGCTTAAGCGAGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GTYCKAITESSEAFRLLGSGRAS*LKRVSS
Trigger: GGATGACACTCGCTTAAGTCACGACGCCCTCCCAGA...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCCTGTTCCAGTGGGTTaGATAGGACCACAAACCTGG +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVPVPVG*IGPQTW
Trigger: CCAGGTTTGTGGTCCTATTCAACCCACTGGAACAGG...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCCCTGTTCCAGTGGGTTaGATAGGACCACAAACCTGG +
Preference number: 4 (lower is better)
Translates to: PQEALTQAEAKGSNLHGLPVPVG*IGPQTW
Trigger: CCAGGTTTGTGGTCCTATTCAACCCACTGGAACAGG...GAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTGGTGCCAGAGTCAATaGCACGGAGAGGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSWCQSQ*HGEETL
Trigger: AAGCGTTTCCTCTCCGTGTCATTGACTCTGGCACCA...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATTGGTGCCAGAGTCAATaGCACGGAGAGGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: NEGRAQCVTVLGGRSGWDWCQSQ*HGEETL
Trigger: AAGCGTTTCCTCTCCGTGTCATTGACTCTGGCACCA...ATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTTGGTGCCAGAGTCAATaGCACGGAGAGGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFWCQSQ*HGEETL
Trigger: AAGCGTTTCCTCTCCGTGTCATTGACTCTGGCACCA...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGGAGCCCAGTAAGGCCTaGGAACCAGACCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGEPSKA*EPDLHV
Trigger: TACATGCAGGTCTGGTTCTCAGGCCTTACTGGGCTC...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCGATGTCCACCAGGGATaGTATGTCCAGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTDVHQG*YVQRQP
Trigger: GGGCTGTCTCTGGACATATCATCCCTGGTGGACATC...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGATGTCCACCAGGGATaGTATGTCCAGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYDVHQG*YVQRQP
Trigger: GGGCTGTCTCTGGACATATCATCCCTGGTGGACATC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTACGTCGGGGCTGCACCTaGAAGCCATTGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLRRGCT*KPLRSV
Trigger: CACAGACCTCAATGGCTTTCAGGTGCAGCCCCGACG...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000559717.6
CDS-3UTR TCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGCGTCGGGGCTGCACCTaGAAGCCATTGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVRRGCT*KPLRSV
Trigger: CACAGACCTCAATGGCTTTCAGGTGCAGCCCCGACG...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360468.7
ENST00000559717.6
ENST00000561448.5
CDS-3UTR TCA 90 bp CCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCAGCCAGAGGATGAAATaGGCGCAGACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PAIIRKSPWGQQHTEHRSSQRMK*AQTRAW
Trigger: CCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCT...GCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTAGCCAGAGGATGAAATaGGCGCAGACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSSQRMK*AQTRAW
Trigger: CCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCT...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCGAAGTCACAGGGCAGTaGGGAAGCCAGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVEVTGQ*GSQRMK
Trigger: TTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTC...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGGAGCGTACGTAGGTTaGGCAGGTGGAAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTGAYVG*AGGSHR
Trigger: CCTGTGACTTCCACCTGCTCAACCTACGTACGCTCC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCCCTTGCGGTGTAAGATaGGTGCGGTCTCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCPCGVR*VRSPPR
Trigger: CCTCGGCGGAGACCGCACTCATCTTACACCGCAAGG...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp TGTGGTGCAGTTGAAGCCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTTGGCTTGTGGTGCAGTTaGAGCCCAAGTTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CGAVEAQVLGLQAAVKTLGLWCS*SPSSWP
Trigger: AGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCC...AAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGVKEVG*RNTTSR
Trigger: CCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGAC...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACTGGCACTGCCCACTCTaGCCAAGGGCCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINWHCPL*PRAFSP
Trigger: GGGAGAGAAGGCCCTTGGTCAGAGTGGGCAGTGCCA...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCTCCCAGAGTCACTCTaGTCCTGCTCATCACACCAG +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYLPESL*SCSSHQ
Trigger: CTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAG...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCTCCCAGAGTCACTCTaGTCCTGCTCATCACACCAG +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTLPESL*SCSSHQ
Trigger: CTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAG...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTACTCCCAGAGTCACTCTaGTCCTGCTCATCACACCAG +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLLPESL*SCSSHQ
Trigger: CTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAG...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGGCTCCAGCTGCTCAATaGGGTTCTGCAGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPAPAAQ*GSAAQK
Trigger: TTTCTGTGCTGCAGAACCGCATTGAGCAGCTGGAGC...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCGAGATGTCGAAGCCTTaGCTCCACACACCACCATCC +
Preference number: 4 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFEMSKP*LHTPPS
Trigger: GGATGGTGGTGTGTGGAGGCAAGGCTTCGACATCTC...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACGGCACCACAAACACCTaGAGGTCTTCAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENGTTNT*RSSASQ
Trigger: CTGGGATGCTGAAGACCTGCAGGTGTTTGTGGTGCC...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGAAGAAGGAGACCTCTaGCCAGAGGAAGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINEEGDL*PEEAPP
Trigger: CGGCGGCGCTTCCTCTGGGCAGAGGTCTCCTTCTTC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATCACCAGCCTTCGGACTaGCGCTCTCTTTTGGACATT +
Preference number: 4 (lower is better)
Translates to: NEGRAQCVTVLGGRSGWDHQPSD*RSLLDI
Trigger: AATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTG...ATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAACACCAGCCTTCGGACTaGCGCTCTCTTTTGGACATT +
Preference number: 4 (lower is better)
Translates to: VSQFWEADRDGIPVWLVQHQPSD*RSLLDI
Trigger: AATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTG...TTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGTCGCAATCTCCAGCTaGCCGTTTCCCACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTVAISS*PFPTSL
Trigger: AAGGCTGGTGGGAAACGGGCAGCTGGAGATTGCGAC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTGTCGCAATCTCCAGCTaGCCGTTTCCCACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFVAISS*PFPTSL
Trigger: AAGGCTGGTGGGAAACGGGCAGCTGGAGATTGCGAC...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACGCACCAGGAGGACGTTaGTTCGGAACAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHAPGGR*FGTAGT
Trigger: AGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGC...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGGCACCAGGAGGACGTTaGTTCGGAACAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQAPGGR*FGTAGT
Trigger: AGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGC...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAAGGCCCAGCTGTAGCTaGAGCACGCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRRPSCS*STPRPR
Trigger: CCTGGGCCTGGGCGTGCTGCAGCTACAGCTGGGCCT...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCAGAGGAAACGCTTCGTaGCTGCTGACGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTRGNAS*LLTDSC
Trigger: GCAGCTGTCCGTCAGCAGGCACGAAGCGTTTCCTCT...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTAGAGGAAACGCTTCGTaGCTGCTGACGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLRGNAS*LLTDSC
Trigger: GCAGCTGTCCGTCAGCAGGCACGAAGCGTTTCCTCT...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGTGCATGTCCACCTGCTaGTCGTGCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQCMSTC*SCSSST
Trigger: GGTGGATGAGGAGCACGAGCAGCAGGTGGACATGCA...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTTGCATGTCCACCTGCTaGTCGTGCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVCMSTC*SCSSST
Trigger: GGTGGATGAGGAGCACGAGCAGCAGGTGGACATGCA...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCACTTTGGACGTACGGGTaGCATAGACAAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPLWTYG*HRQGPA
Trigger: TGCAGGTCCTTGTCTATGGCACCCGTACGTCCAAAG...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGATGTCTGTATGGATGTaGAGGGCCAGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVMSVWM*RASSLL
Trigger: CAACAAGGAGCTGGCCCTGCACATCCATACAGACAT...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGGAGGCGGAAACGGTTaGAGGTTCTCTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFGGGNG*RFSCCP
Trigger: AGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCGGAGGCGGAAACGGTTaGAGGTTCTCTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSGGGNG*RFSCCP
Trigger: AGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCC...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTTGCCCAGGGCTACCTTaGCTTGGCTTGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLCPGLP*LGLWCS
Trigger: ACTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCA...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTTGCCCAGGGCTACCTTaGCTTGGCTTGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVCPGLP*LGLWCS
Trigger: ACTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCA...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACTGCCCAGGGCTACCTTaGCTTGGCTTGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYCPGLP*LGLWCS
Trigger: ACTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCA...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGGCCATGGAAAAGGCTaGCCAGGGCTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYGHGKG*PGLPCL
Trigger: AAGGCAAGGTAGCCCTGGGCAGCCTTTTCCATGGCC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGACCAAATAGACGTCAGTaGTGTTGGACGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ISLASALFTHHWVCGLRRPNRRQ*CWTGRP
Trigger: TGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGG...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAAACTGGGTTTGTGGGTTaGGCCGAAAACACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VSQFWEADRDGIPVWLVQTGFVG*AENTAA
Trigger: TGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGT...TTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCTGGAAAAAGGATGGGTaGCTGAGCCTGTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVWKKDG*LSLCPV
Trigger: AACTGGGCACAGGCTCAGGCACCCATCCTTTTTCCA...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCCTAGAGCCTGCTGTTaGCACAGTGACCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTPRACC*HSDPDA
Trigger: AGCATCAGGGTCACTGTGGCAACAGCAGGCTCTAGG...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACGATTCCCCTAGAGCCTaGTGTTGCCACAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENDSPRA*CCHSDP
Trigger: AGGGTCACTGTGGCAACAGCAGGCTCTAGGGGAATC...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGATTCCCCTAGAGCCTaGTGTTGCCACAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLDSPRA*CCHSDP
Trigger: AGGGTCACTGTGGCAACAGCAGGCTCTAGGGGAATC...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp TGTGGTGCAGTTGAAGCCCAAGTTCTTGGCCTCCAGGCCGCAGTCAAAACCCTTCTGTTAGCCAATGCATaGAGGCCAGGCGGCACTTAC +
Preference number: 4 (lower is better)
Translates to: CGAVEAQVLGLQAAVKTLLLANA*RPGGTY
Trigger: GTAAGTGCCGCCTGGCCTGCATGCATTGGCTAACAG...AAGGGTTTTGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAACTGCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTCAGCCTGTTAGCCAATaGATGCAGGCCAGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSQPVSQ*MQARRH
Trigger: GTGCCGCCTGGCCTGCATGCATTGGCTAACAGGCTG...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGGAGGGATGGGTAGCTGGTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTTCCTTCCTGCCATTCTaGAGCCTGTTAGCCAATGCA +
Preference number: 4 (lower is better)
Translates to: EEGWVAGRVAILDLTAHGSFLPF*SLLANA
Trigger: TGCATTGGCTAACAGGCTGCAGAATGGCAGGAAGGA...ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACCAGCTACCCATCCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGGCCCCTAGTCCCCTGTaGCAGGAACTGAATACCTCT +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMAPSPL*QELNTS
Trigger: AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGC...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGAGATGGAGAAGAAGCTaGGCCGGGGCTCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRRWRRS*AGAPVA
Trigger: TGCCACCGGAGCCCCGGCCCAGCTTCTTCTCCATCT...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCCAAAGTAGTGGGAATTaGCCTCATCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSQSSGN*PHLASP
Trigger: GGGTGATGCCAGATGAGGCCAATTCCCACTACTTTG...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGATGAACTCTAGGCTGTaGGTGGCAGCAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVMNSRL*VAAKCF
Trigger: GAAGCACTTTGCTGCCACCCACAGCCTAGAGTTCAT...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGGCAGATCTTGGGATCTaGGCCACAGGTATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQADLGI*ATGMGD
Trigger: GTCCCCCATACCTGTGGCCCAGATCCCAAGATCTGC...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGTTGCTTCGGAACAGCTaGGACTTCTTCCGGTATTGG +
Preference number: 4 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVLLRNS*DFFRYW
Trigger: CCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAA...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAAACTGGGCCTGCACATaGAGGTTAGGCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLNWACT*RLGLLL
Trigger: CAACAGCAGGCCTAACCTCCATGTGCAGGCCCAGTT...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACAACTGGGCCTGCACATaGAGGTTAGGCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENNWACT*RLGLLL
Trigger: CAACAGCAGGCCTAACCTCCATGTGCAGGCCCAGTT...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTGAAAGAGTGCCAAACTaGGCCTGCACATGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: HAGQAALTAKPSQKAARPERVPN*ACTWRL
Trigger: TAACCTCCATGTGCAGGCCCAGTTTGGCACTCTTTC...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTGAAAGAGTGCCAAACTaGGCCTGCACATGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIERVPN*ACTWRL
Trigger: TAACCTCCATGTGCAGGCCCAGTTTGGCACTCTTTC...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGGGTGAAATCAGACAGTaGGTACCGGCCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLGEIRQ*VPASQT
Trigger: GGTCTGGCTGGCCGGTACCCACTGTCTGATTTCACC...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACGAGTGTCATCCACTTaGAGGAAGGGCGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGRVSST*RKGASG
Trigger: CCCTGAGGCGCCCTTCCTCCAAGTGGATGACACTCG...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATAGGACCACAAACCTaGGCGAGGAATCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPIGPQT*ARNPAG
Trigger: TCCAGCTGGATTCCTCGCCCAGGTTTGTGGTCCTAT...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCTGTCGATGTCTGTATaGATGTGCAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYLSMSV*MCRASS
Trigger: GGAGCTGGCCCTGCACATCCATACAGACATCGACAG...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGCTGTCGATGTCTGTATaGATGTGCAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGLSMSV*MCRASS
Trigger: GGAGCTGGCCCTGCACATCCATACAGACATCGACAG...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAAGCATGGGGTAGAAGTTaGCCTGGAGGGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAEAWGRS*PGGGAS
Trigger: AGAAGCTCCCCCTCCAGGCCAACTTCTACCCCATGC...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGCATGGGGTAGAAGTTaGCCTGGAGGGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GTYCKAITESSEAFRLLGAWGRS*PGGGAS
Trigger: AGAAGCTCCCCCTCCAGGCCAACTTCTACCCCATGC...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTGATATAGGCCATGACTaGCATGGGGTAGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSDIGHD*HGVEVG
Trigger: GCCAACTTCTACCCCATGCCAGTCATGGCCTATATC...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGTTGTCCTTGAGCCCTTaGCCTAGGCCCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRLSLSP*PRPRLS
Trigger: TGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAA...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATGTAGAGTGGCTATCTTaGACCTCACTGCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: NEGRAQCVTVLGGRSGWDVEWLS*TSLPTV
Trigger: AACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC...ATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGGTAGAGTGGCTATCTTaGACCTCACTGCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPVEWLS*TSLPTV
Trigger: AACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCGTAGAGTGGCTATCTTaGACCTCACTGCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSVEWLS*TSLPTV
Trigger: AACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYVAEEG*VAGRVA
Trigger: AGCCACTCTACCAGCTACCCATCCCTCCTCAGCCAC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRVAEEG*VAGRVA
Trigger: AGCCACTCTACCAGCTACCCATCCCTCCTCAGCCAC...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACCGTAGGTTGAGCAGGTaGAAGTCACAGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENRRLSR*KSQGSE
Trigger: CTCACTGCCCTGTGACTTCCACCTGCTCAACCTACG...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCGTAGGTTGAGCAGGTaGAAGTCACAGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTRRLSR*KSQGSE
Trigger: CTCACTGCCCTGTGACTTCCACCTGCTCAACCTACG...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCCGTAGGTTGAGCAGGTaGAAGTCACAGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSRRLSR*KSQGSE
Trigger: CTCACTGCCCTGTGACTTCCACCTGCTCAACCTACG...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTAGGGCTACCTTGCCTTaGCTTGTGGTGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFRATLP*LVVQLK
Trigger: CTTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCT...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAGGGCTACCTTGCCTTaGCTTGTGGTGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPRATLP*LVVQLK
Trigger: CTTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCT...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSSVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTCTATTTACCCATCACTaGGTTTGTGGGTTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPILFTHH*VCGLRR
Trigger: TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAG...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GAGGAGGGATGGGTAGCTGGTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTCTATTTACCCATCACTaGGTTTGTGGGTTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: EEGWVAGRVAILDLTAHGLFTHH*VCGLRR
Trigger: TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAG...ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACCAGCTACCCATCCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAAGAGCCTGTGCCCAGTTaGGTGTCCACTCACAACCCA +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAEEPVPS*VSTHNP
Trigger: TGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTC...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCTGTTTGGAAAAAGGATaGGTGCCTGAGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: PQEALTQAEAKGSNLHGLCLEKG*VPEPVP
Trigger: GGGCACAGGCTCAGGCACCCATCCTTTTTCCAAACA...GAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGAAGCACATGGAGTCTTaGAGGCTTTCCTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPARRGAERLLKLPKHMEKHMES*RLSFPE
Trigger: CTCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTT...CTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGGGCGTGAGAATCCTCTaGGAATCTGGCAGGATCACC +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMGVRIL*ESGRIT
Trigger: GGTGATCCTGCCAGATTCCCAGAGGATTCTCACGCC...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACTCTTGTCTTTAGGTaGCAGCTTGGCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENTLVFR*QLGRPQ
Trigger: CTGGGGCCTGCCAAGCTGCCACCTAAAGACAAGAGT...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGATGGGGTTCCACTGTGTaGCCTAATACGGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: ISLASALFTHHWVCGLRRWGSTV*PNTGSN
Trigger: GTTGCTGCCCGTATTAGGCCACACAGTGGAACCCCA...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR CAA 72 bp ACTCTGATGACCTGGAAGAACTCAGCCCTCTCACTCTaGTCTTTAGGTGGCAGCTTGGCAGGCCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: TLMTWKNSALSL*SLGGSLAGPSD
Trigger: GTCACTGGGGCCTGCCAAGCTGCCACCTAAAGACAAGAGTGAGAGGGCTGAGTTCTTCCAGGTCATCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGCACTCGGTCCAGCATaGGGTAGAGCGAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSALGPA*GRARRL
Trigger: CAGTCTTCTCGCTCTACCTCATGCTGGACCGAGTGC...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTCAGCAAAGTGCTTCTTaGTGGCATAGTGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIQQSAS*WHSALS
Trigger: AGAGAGTGCACTATGCCATCAAGAAGCACTTTGCTG...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAATGTCTGCCTCCACATaGACTCTAGGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQAMSAST*TLGCGW
Trigger: CCACCCACAGCCTAGAGTTCATGTGGAGGCAGACAT...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGATGTCTGCCTCCACATaGACTCTAGGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRMSAST*TLGCGW
Trigger: CCACCCACAGCCTAGAGTTCATGTGGAGGCAGACAT...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTCACCAGGCAGGCGTTTaGAATCAAATTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFHQAGV*NQIGSR
Trigger: TCTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTG...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGAGCCGTTGGTAGTTaGAGAACTGGGCATCCCACT +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSRAVGS*RTGHPT
Trigger: AGTGGGATGCCCAGTTCTTCAACTACCAACGGCTCT...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGCTTCCGTCAGGAGGGTaGAATCAGACAGTGGGTACC +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRLPSGG*NQTVGT
Trigger: GGTACCCACTGTCTGATTTCACCCTCCTGACGGAAG...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCCAGTGATGGCATCGTaGTGCTGGAAGAGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQPVMAS*CWKSPN
Trigger: ATTGGGGCTCTTCCAGCATCACGATGCCATCACTGG...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCCCAGTGATGGCATCGTaGTGCTGGAAGAGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTPVMAS*CWKSPN
Trigger: ATTGGGGCTCTTCCAGCATCACGATGCCATCACTGG...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTATCTGGGAGGGCGTCGTaGCTTAAGCGAGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLSGRAS*LKRVSS
Trigger: GGATGACACTCGCTTAAGTCACGACGCCCTCCCAGA...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGACCTGTTCCAGTGGGTTaGATAGGACCACAAACCTGG +
Preference number: 4 (lower is better)
Translates to: ISLASALFTHHWVCGLRRPVPVG*IGPQTW
Trigger: CCAGGTTTGTGGTCCTATTCAACCCACTGGAACAGG...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAAGCAGGGACACCATGCTaGATCGCTCCTGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQAGTPC*IAPVPV
Trigger: CACTGGAACAGGAGCGATTCAGCATGGTGTCCCTGC...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTGAGCCCAGTAAGGCCTaGGAACCAGACCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVEPSKA*EPDLHV
Trigger: TACATGCAGGTCTGGTTCTCAGGCCTTACTGGGCTC...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGAGCCCAGTAAGGCCTaGGAACCAGACCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADREPSKA*EPDLHV
Trigger: TACATGCAGGTCTGGTTCTCAGGCCTTACTGGGCTC...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAGGGCCAGCTCCTTGTTaGCGTAGTCCCGGATGTCCA +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGEGPAPC*RSPGCP
Trigger: TGGACATCCGGGACTACGTCAACAAGGAGCTGGCCC...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTTGGAGGTCAGGTGGCTaGGGAGGGATGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCWRSGG*GGMGSW
Trigger: CCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCA...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTCCTTGCGGTGTAAGATaGGTGCGGTCTCCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCPCGVR*VRSPPR
Trigger: CCTCGGCGGAGACCGCACTCATCTTACACCGCAAGG...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTGGCTTGTGGTGCAGTTaGAGCCCAAGTTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLGLWCS*SPSSWP
Trigger: AGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCC...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGGGCTTGTGGTGCAGTTaGAGCCCAAGTTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLGLWCS*SPSSWP
Trigger: AGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCC...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCCAAATAGACGTCAGTGCTGGCTTGTGGTGCAGTTaGAGCCCAAGTTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QAEAKGSNLHGLQIDVSAGLWCS*SPSSWP
Trigger: AGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCC...AGCACTGACGTCTATTTGGAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTTGGCACTGCCCACTCTaGCCAAGGGCCTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCWHCPL*PRAFSP
Trigger: GGGAGAGAAGGCCCTTGGTCAGAGTGGGCAGTGCCA...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCTCCCAGAGTCACTCTaGTCCTGCTCATCACACCAG +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLLPESL*SCSSHQ
Trigger: CTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAG...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCATATGATCTCTGGCCATaGCAATCTCTAGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SQREFRQGEGPHTPATIPYDLWP*QSLASP
Trigger: AGGACTCGCTAGAGATTGTCATGGCCAGAGATCATA...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTACTCTCCCGTCTGTCTaGCCCCCTCCAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSTLPSV*PPPGHT
Trigger: AGTGTGACCTGGAGGGGGTCAGACAGACGGGAGAGT...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGAAAAGCTGCTCCAGCTaGTCAATGCGGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGKSCSS*SMRFCS
Trigger: GCTGCAGAACCGCATTGAGCAGCTGGAGCAGCTTTT...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGGGCACCACAAACACCTaGAGGTCTTCAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQGTTNT*RSSASQ
Trigger: CTGGGATGCTGAAGACCTGCAGGTGTTTGTGGTGCC...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGGTCGCAATCTCCAGCTaGCCGTTTCCCACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVVAISS*PFPTSL
Trigger: AAGGCTGGTGGGAAACGGGCAGCTGGAGATTGCGAC...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAGCACCAGGAGGACGTTaGTTCGGAACAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGAPGGR*FGTAGT
Trigger: AGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGC...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGCACCAGGAGGACGTTaGTTCGGAACAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAAPGGR*FGTAGT
Trigger: AGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAGGAAGAGCCCCAATGTaGGCCGAGCTTCCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGEGRAPM*AELPSG
Trigger: TCCTGACGGAAGCTCGGCGCACATTGGGGCTCTTCC...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACTCCACCTGCTGCTCGTaGTCCTCATCCACCCTTCGG +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINSTCCS*SSSTLR
Trigger: CCGAAGGGTGGATGAGGAGCACGAGCAGCAGGTGGA...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCTCCACCTGCTGCTCGTaGTCCTCATCCACCCTTCGG +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCSTCCS*SSSTLR
Trigger: CCGAAGGGTGGATGAGGAGCACGAGCAGCAGGTGGA...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCTGCATGTCCACCTGCTaGTCGTGCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: PAIIRKSPWGQQHTEHRSCMSTC*SCSSST
Trigger: GGTGGATGAGGAGCACGAGCAGCAGGTGGACATGCA...GCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTGCATGTCCACCTGCTaGTCGTGCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSCMSTC*SCSSST
Trigger: GGTGGATGAGGAGCACGAGCAGCAGGTGGACATGCA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCTTTGGACGTACGGGTaGCATAGACAAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTLWTYG*HRQGPA
Trigger: TGCAGGTCCTTGTCTATGGCACCCGTACGTCCAAAG...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGATGTCTGTATGGATGTaGAGGGCCAGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPMSVWM*RASSLL
Trigger: CAACAAGGAGCTGGCCCTGCACATCCATACAGACAT...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCACGTGAGGCGCTTCTGTaGGTCCTGGATATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQAREALL*VLDIGH
Trigger: ATGGCCTATATCCAGGACGCACAGAAGCGCCTCACG...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATAGGGCCTGGGCAGTGTaGAGCGTGAGGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADRAWAV*SVRRFC
Trigger: ACAGAAGCGCCTCACGCTGCACACTGCCCAGGCCCT...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTCCCCGGTTGTCATCCTaGATCAGCCGCCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCPRLSS*ISRRSK
Trigger: CTTGGACCGGCGGCTGATGCAGGATGACAACCGGGG...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGGGAGGCGGAAACGGTTaGAGGTTCTCTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMGGGNG*RFSCCP
Trigger: AGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCC...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGTATCTTGGACCTCACTaGCCACGGTTCGCCGCTCTA +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLYLGPH*PRFAAL
Trigger: TAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATA...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTCCAGGGCCTGGGAGCTaGATCCTGGCTACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCPGPGS*ILATGR
Trigger: TCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGG...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGTGCCCAGGGCTACCTTaGCTTGGCTTGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVCPGLP*LGLWCS
Trigger: ACTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCA...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCCAAATAGACGTCAGTaGTGTTGGACGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQPNRRQ*CWTGRP
Trigger: TGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGG...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAAGATCTCACTGGCGTCTaGCCTATTTACCCATCACTG +
Preference number: 4 (lower is better)
Translates to: VSQFWEADRDGIPVWLVQDLTGV*PIYPSL
Trigger: CAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC...TTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTGATTCCCCTAGAGCCTaGTGTTGCCACAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFDSPRA*CCHSDP
Trigger: AGGGTCACTGTGGCAACAGCAGGCTCTAGGGGAATC...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCTGTTAGCCAATGCATaGAGGCCAGGCGGCACTTAC +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFLLANA*RPGGTY
Trigger: GTAAGTGCCGCCTGGCCTGCATGCATTGGCTAACAG...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCTCCTTCCTGCCATTCTaGAGCCTGTTAGCCAATGCA +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVSFLPF*SLLANA
Trigger: TGCATTGGCTAACAGGCTGCAGAATGGCAGGAAGGA...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGCCAAGTGCCCAGTTTaGCAGGGGTCTTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSAKCPV*QGSCYL
Trigger: CAGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGC...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAAAGGACCCCACACCCCTaGCACCATCCCACAAATCAG +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQRTPHP*HHPTNQ
Trigger: CTGATTTGTGGGATGGTGGCAGGGGTGTGGGGTCCT...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCAACGCCTTCTCAAGCTaGCCAAGCACATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVNAFSS*PSTWSL
Trigger: AAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTAACGCCTTCTCAAGCTaGCCAAGCACATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFNAFSS*PSTWSL
Trigger: AAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCAACGCCTTCTCAAGCTaGCCAAGCACATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSNAFSS*PSTWSL
Trigger: AAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGGCCCCTAGTCCCCTGTaGCAGGAACTGAATACCTCT +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQAPSPL*QELNTS
Trigger: AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGC...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACGCCCCTAGTCCCCTGTaGCAGGAACTGAATACCTCT +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHAPSPL*QELNTS
Trigger: AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGC...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTCCTGCACAGCCATACTaGCTCCTCATATACTCTACA +
Preference number: 4 (lower is better)
Translates to: HAGQAALTAKPSQKAARPPAQPY*LLIYST
Trigger: TGTAGAGTATATGAGGAGGCAGTATGGCTGTGCAGG...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCCCTGCACAGCCATACTaGCTCCTCATATACTCTACA +
Preference number: 4 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSPAQPY*LLIYST
Trigger: TGTAGAGTATATGAGGAGGCAGTATGGCTGTGCAGG...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCAAAGTTCCCACCATTCTaGTGTCGGGTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAKFPPF*CRVGSC
Trigger: ACACGATCCCACCCGACACCAGAATGGTGGGAACTT...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACAAGTTCCCACCATTCTaGTGTCGGGTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENKFPPF*CRVGSC
Trigger: ACACGATCCCACCCGACACCAGAATGGTGGGAACTT...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCCAAATAGACGTCAGTGCTGGTCTTGATCCAGCCTaGGTCATTGTGAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QAEAKGSNLHGLQIDVSAGLDPA*VIVRVG
Trigger: CCCCACTCTCACAATGACCCAGGCTGGATCAAGACC...AGCACTGACGTCTATTTGGAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTGTTGTCCCACCACTTaGCGAAGAAGGAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMCCPTT*RRRRPL
Trigger: CAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACA...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTTCTCTCCAGCCACTaGTGTCCTTCGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGFLSSH*CPSMSW
Trigger: CCAGCTCATCGAAGGACACCAGTGGCTGGAGAGAAA...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAAATGAACTCTAGGCTGTaGGTGGCAGCAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSQFWEADRDGIPVWLVQMNSRL*VAAKCF
Trigger: GAAGCACTTTGCTGCCACCCACAGCCTAGAGTTCAT...TTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCAGAAGATGTCTGTGCTaGAGTCCGAGTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSRRCLC*SPSPMS
Trigger: AGACATGGGACTCGGACTCCAGCACAGACATCTTCT...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCAGAAGATGTCTGTGCTaGAGTCCGAGTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVRRCLC*SPSPMS
Trigger: AGACATGGGACTCGGACTCCAGCACAGACATCTTCT...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGCAGATCTTGGGATCTaGGCCACAGGTATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSADLGI*ATGMGD
Trigger: GTCCCCCATACCTGTGGCCCAGATCCCAAGATCTGC...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGTTGCTTCGGAACAGCTaGGACTTCTTCCGGTATTGG +
Preference number: 4 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPLLRNS*DFFRYW
Trigger: CCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAA...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAAGGTGAAATCAGACAGTaGGTACCGGCCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQGEIRQ*VPASQT
Trigger: GGTCTGGCTGGCCGGTACCCACTGTCTGATTTCACC...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACCGAGTGTCATCCACTTaGAGGAAGGGCGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINRVSST*RKGASG
Trigger: CCCTGAGGCGCCCTTCCTCCAAGTGGATGACACTCG...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCCAGCCCCTCCACCCCTaGCAGATTGTAAAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCQPLHP*QIVKPD
Trigger: GTCCGGCTTTACAATCTGCCAGGGGTGGAGGGGCTG...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGACTGTCGATGTCTGTATaGATGTGCAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GTYCKAITESSEAFRLLGLSMSV*MCRASS
Trigger: GGAGCTGGCCCTGCACATCCATACAGACATCGACAG...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTGTGAAGAAGATACCCTaGCTGTCGATGTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSVKKIP*LSMSVW
Trigger: CCATACAGACATCGACAGCCAGGGTATCTTCTTCAC...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGGATATAGGCCATGACTaGCATGGGGTAGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGDIGHD*HGVEVG
Trigger: GCCAACTTCTACCCCATGCCAGTCATGGCCTATATC...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGTTGTCCTTGAGCCCTTaGCCTAGGCCCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVLSLSP*PRPRLS
Trigger: TGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAA...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATTGTCCTTGAGCCCTTaGCCTAGGCCCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQLSLSP*PRPRLS
Trigger: TGACAACCGGGGCCTAGGCCAAGGGCTCAAGGACAA...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAVAEEG*VAGRVA
Trigger: AGCCACTCTACCAGCTACCCATCCCTCCTCAGCCAC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTCTGGGAGCTGCATCCTaGCTACAGGCAGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCLGAAS*LQAERA
Trigger: CGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAG...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACCGTAGGTTGAGCAGGTaGAAGTCACAGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYRRLSR*KSQGSE
Trigger: CTCACTGCCCTGTGACTTCCACCTGCTCAACCTACG...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAGTGTCCTCCTCAGCCTaGAGCGTACGTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGVSSSA*SVRRLS
Trigger: GCTCAACCTACGTACGCTCCAGGCTGAGGAGGACAC...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAAGTGTCCTCCTCAGCCTaGAGCGTACGTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQVSSSA*SVRRLS
Trigger: GCTCAACCTACGTACGCTCCAGGCTGAGGAGGACAC...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTGTCCTCCTCAGCCTaGAGCGTACGTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAVSSSA*SVRRLS
Trigger: GCTCAACCTACGTACGCTCCAGGCTGAGGAGGACAC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGACCATCACTGGGTTTGTaGGTTGCGCCGAAAACACAG +
Preference number: 4 (lower is better)
Translates to: ISLASALFTHHWVCGLRRPSLGL*VAPKTQ
Trigger: CTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGG...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCCATCACTGGGTTTGTaGGTTGCGCCGAAAACACAG +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTPSLGL*VAPKTQ
Trigger: CTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGG...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGCCATCACTGGGTTTGTaGGTTGCGCCGAAAACACAG +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGPSLGL*VAPKTQ
Trigger: CTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGG...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGTTCTATATCCCTGTTTaGAAAAAGGATGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLFYIPV*KKDGCL
Trigger: CAGGCACCCATCCTTTTTCCAAACAGGGATATAGAA...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTAAGCACATGGAGTCTTaGAGGCTTTCCTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HAGQAALTAKPSQKAARPKHMES*RLSFPE
Trigger: CTCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTT...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTCTTATGTTCCTCATCTaGCTTGTTGCAGGGGTTAGT +
Preference number: 4 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRLMFLI*LVAGVS
Trigger: ACTAACCCCTGCAACAAGCCAGATGAGGAACATAAG...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCAACAACTCTGATGACCTaGAAGAACTCAGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SQREFRQGEGPHTPATIPTTLMT*KNSALS
Trigger: TGAGAGGGCTGAGTTCTTCCAGGTCATCAGAGTTGT...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp CATGCAGGCCAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTTTTCAGCTTCATACTaGCCTCCACACACACCGTCA +
Preference number: 4 (lower is better)
Translates to: HAGQAALTAKPSQKAARPFSASY*PPHTPS
Trigger: TGACGGTGTGTGTGGAGGCCAGTATGAAGCTGAAAA...AGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTGGCCTGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
3UTR CAA 72 bp ACGGGGAGGCCAGAGGGTACAGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACATCCAGGCCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: TGRPEGTVTSRR*AEGIPHPGHGK
Trigger: TTTTCCATGGCCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTACTGTACCCTCTGGCCTCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTATGTCTGCCTCCACATaGACTCTAGGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCMSAST*TLGCGW
Trigger: CCACCCACAGCCTAGAGTTCATGTGGAGGCAGACAT...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGCACCAGGCAGGCGTTTaGAATCAAATTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGHQAGV*NQIGSR
Trigger: TCTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTG...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCCACCAGGCAGGCGTTTaGAATCAAATTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFHQAGV*NQIGSR
Trigger: TCTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTG...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAAGAGCCGTTGGTAGTTaGAGAACTGGGCATCCCACT +
Preference number: 4 (lower is better)
Translates to: GTYCKAITESSEAFRLLGRAVGS*RTGHPT
Trigger: AGTGGGATGCCCAGTTCTTCAACTACCAACGGCTCT...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGCCAGTGATGGCATCGTaGTGCTGGAAGAGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVPVMAS*CWKSPN
Trigger: ATTGGGGCTCTTCCAGCATCACGATGCCATCACTGG...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACCCTGTTCCAGTGGGTTaGATAGGACCACAAACCTGG +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHPVPVG*IGPQTW
Trigger: CCAGGTTTGTGGTCCTATTCAACCCACTGGAACAGG...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCCTGTTCCAGTGGGTTaGATAGGACCACAAACCTGG +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLPVPVG*IGPQTW
Trigger: CCAGGTTTGTGGTCCTATTCAACCCACTGGAACAGG...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAAGTACGCAACCACCTCTaGGAAGAAAGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAEVRNHL*EERAFS
Trigger: ACTGAAGGCCCTTTCTTCTCAGAGGTGGTTGCGTAC...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGTACGCAACCACCTCTaGGAAGAAAGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYVRNHL*EERAFS
Trigger: ACTGAAGGCCCTTTCTTCTCAGAGGTGGTTGCGTAC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATGTCCACCAGGGATaGTATGTCCAGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSDVHQG*YVQRQP
Trigger: GGGCTGTCTCTGGACATATCATCCCTGGTGGACATC...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATAGCCAGAGGATGAAATaGGCGCAGACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADSQRMK*AQTRAW
Trigger: CCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCT...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTAGCCAGAGGATGAAATaGGCGCAGACCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSSQRMK*AQTRAW
Trigger: CCAGGCCCTGGTCTGCGCTCATTTCATCCTCTGGCT...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGAAGTCACAGGGCAGTaGGGAAGCCAGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQAEVTGQ*GSQRMK
Trigger: TTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTC...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTGAAGTCACAGGGCAGTaGGGAAGCCAGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLEVTGQ*GSQRMK
Trigger: TTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTC...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGAAGTCACAGGGCAGTaGGGAAGCCAGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTEVTGQ*GSQRMK
Trigger: TTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGGAGCGTACGTAGGTTaGGCAGGTGGAAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINGAYVG*AGGSHR
Trigger: CCTGTGACTTCCACCTGCTCAACCTACGTACGCTCC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGGGAGCGTACGTAGGTTaGGCAGGTGGAAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRGAYVG*AGGSHR
Trigger: CCTGTGACTTCCACCTGCTCAACCTACGTACGCTCC...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGGCTTGTGGTGCAGTTaGAGCCCAAGTTCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSGLWCS*SPSSWP
Trigger: AGGCCAAGAACTTGGGCTTCAACTGCACCACAAGCC...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAAGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAEVKEVG*RNTTSR
Trigger: CCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGAC...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYVKEVG*RNTTSR
Trigger: CCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGAC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGACTCCCAGAGTCACTCTaGTCCTGCTCATCACACCAG +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRLPESL*SCSSHQ
Trigger: CTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAG...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGGCAGGAAGAGGTAGGCTCCACTCTTGTCTTTGGACGTACGGGTGCCATAGACTATGATCTCTGGCCATaGCAATCTCTAGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GQEEVGSTLVFGRTGAIDYDLWP*QSLASP
Trigger: AGGACTCGCTAGAGATTGTCATGGCCAGAGATCATA...GTCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAGCCTACCTCTTCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS-3UTR TCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCTTGGCAGGCCCCAGTaGCTTTCTCTAAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRLGRPQ*LSLRTL
Trigger: CAGGGTCCTTAGAGAAAGTCACTGGGGCCTGCCAAG...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTGCTCCAGCTGCTCAATaGGGTTCTGCAGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLAPAAQ*GSAAQK
Trigger: TTTCTGTGCTGCAGAACCGCATTGAGCAGCTGGAGC...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCATTCTCCTCCAAAAGCTaGTCCAGCTGCTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQAFSSKS*SSCSMR
Trigger: CCGCATTGAGCAGCTGGAGCAGCTTTTGGAGGAGAA...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTGACAGAAGATGTCTGTaGTGGAGTCCGAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVDRRCL*WSPSPM
Trigger: CATGGGACTCGGACTCCAGCACAGACATCTTCTGTC...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGAATAGTCAGAAAGAGTaGCAAACTGGGCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: VRLQGLPARRGAERLLKLNSQKE*QTGPAH
Trigger: ATGTGCAGGCCCAGTTTGGCACTCTTTCTGACTATT...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGCACCAGATAGTGGGCTaGATGAATGATGACCTGCTT +
Preference number: 4 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGHQIVG*MNDDLL
Trigger: AAGCAGGTCATCATTCATGCAGCCCACTATCTGGTG...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCAGAGGAAACGCTTCGTaGCTGCTGACGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCRGNAS*LLTDSC
Trigger: GCAGCTGTCCGTCAGCAGGCACGAAGCGTTTCCTCT...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCTTTGGACGTACGGGTaGCATAGACAAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFLWTYG*HRQGPA
Trigger: TGCAGGTCCTTGTCTATGGCACCCGTACGTCCAAAG...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTCGTGAGGCGCTTCTGTaGGTCCTGGATATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCREALL*VLDIGH
Trigger: ATGGCCTATATCCAGGACGCACAGAAGCGCCTCACG...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGCGTGAGGCGCTTCTGTaGGTCCTGGATATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVREALL*VLDIGH
Trigger: ATGGCCTATATCCAGGACGCACAGAAGCGCCTCACG...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGGAGGCGGAAACGGTTaGAGGTTCTCTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTGGGNG*RFSCCP
Trigger: AGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTGGAGGCGGAAACGGTTaGAGGTTCTCTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLGGGNG*RFSCCP
Trigger: AGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCC...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTTATCTTGGACCTCACTaGCCACGGTTCGCCGCTCTA +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCYLGPH*PRFAAL
Trigger: TAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATA...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTATCTTGGACCTCACTaGCCACGGTTCGCCGCTCTA +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSYLGPH*PRFAAL
Trigger: TAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTGGCCATGGAAAAGGCTaGCCAGGGCTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSGHGKG*PGLPCL
Trigger: AAGGCAAGGTAGCCCTGGGCAGCCTTTTCCATGGCC...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGCCAAATAGACGTCAGTaGTGTTGGACGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVPNRRQ*CWTGRP
Trigger: TGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGG...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTACTGGGTTTGTGGGTTaGGCCGAAAACACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVTGFVG*AENTAA
Trigger: TGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGT...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGATCTCACTGGCGTCTaGCCTATTTACCCATCACTG +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYDLTGV*PIYPSL
Trigger: CAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACTGGAAAAAGGATGGGTaGCTGAGCCTGTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHWKKDG*LSLCPV
Trigger: AACTGGGCACAGGCTCAGGCACCCATCCTTTTTCCA...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAATGGAAAAAGGATGGGTaGCTGAGCCTGTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAEWKKDG*LSLCPV
Trigger: AACTGGGCACAGGCTCAGGCACCCATCCTTTTTCCA...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCTAGAGCCTGCTGTTaGCACAGTGACCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGPRACC*HSDPDA
Trigger: AGCATCAGGGTCACTGTGGCAACAGCAGGCTCTAGG...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAAGTGATTCCTTCTACTaGTCCATCCCCACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPSDSFY*SIPTAN
Trigger: GTTAGCAGTGGGGATGGAGCAGTAGAAGGAATCACT...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGCCAAGTGCCCAGTTTaGCAGGGGTCTTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINAKCPV*QGSCYL
Trigger: CAGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTGCCAAGTGCCCAGTTTaGCAGGGGTCTTGCTACCTG +
Preference number: 4 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSAKCPV*QGSCYL
Trigger: CAGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGC...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGGGTCTTGATCCAGCCTaGGTCATTGTGAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVGLDPA*VIVRVG
Trigger: CCCCACTCTCACAATGACCCAGGCTGGATCAAGACC...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTTGTTGTCCCACCACTTaGCGAAGAAGGAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFCCPTT*RRRRPL
Trigger: CAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACA...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCACTGCCGCTCTCTTTTaGACATTGATGTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVTAALF*TLMLSH
Trigger: GTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGT...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGCAAAGTAGTGGGAATTaGCCTCATCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMQSSGN*PHLASP
Trigger: GGGTGATGCCAGATGAGGCCAATTCCCACTACTTTG...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGTTTCTCTCCAGCCACTaGTGTCCTTCGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRFLSSH*CPSMSW
Trigger: CCAGCTCATCGAAGGACACCAGTGGCTGGAGAGAAA...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTGCAGCAGGTAAGGCATaGTGGAGCTGTATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLAAGKA*WSCIQR
Trigger: CCTTTGGATACAGCTCCACCATGCCTTACCTGCTGC...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAGAAGATGTCTGTGCTaGAGTCCGAGTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: ISLASALFTHHWVCGLRRRRCLC*SPSPMS
Trigger: AGACATGGGACTCGGACTCCAGCACAGACATCTTCT...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAATTGGCAGCAGATCTTaGGATCTGGGCCACAGGTAT +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLIGSRS*DLGHRY
Trigger: ATACCTGTGGCCCAGATCCCAAGATCTGCTGCCAAT...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGAAAGAGTGCCAAACTaGGCCTGCACATGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLERVPN*ACTWRL
Trigger: TAACCTCCATGTGCAGGCCCAGTTTGGCACTCTTTC...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGGAAAGAGTGCCAAACTaGGCCTGCACATGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMERVPN*ACTWRL
Trigger: TAACCTCCATGTGCAGGCCCAGTTTGGCACTCTTTC...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAATAGGACCACAAACCTaGGCGAGGAATCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQAIGPQT*ARNPAG
Trigger: TCCAGCTGGATTCCTCGCCCAGGTTTGTGGTCCTAT...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCATAGGACCACAAACCTaGGCGAGGAATCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTIGPQT*ARNPAG
Trigger: TCCAGCTGGATTCCTCGCCCAGGTTTGTGGTCCTAT...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCTCCACTCTTGTCTTTaGACGTACGGGTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: TLTKGLLSLISLASALFTLHSCL*TYGCHR
Trigger: TCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAG...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTACTGTCGATGTCTGTATaGATGTGCAGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLLSMSV*MCRASS
Trigger: GGAGCTGGCCCTGCACATCCATACAGACATCGACAG...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGTGTCCTCCTCAGCCTaGAGCGTACGTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINVSSSA*SVRRLS
Trigger: GCTCAACCTACGTACGCTCCAGGCTGAGGAGGACAC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCGGRSG*DTRVAC
Trigger: ACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGAGCCTGTGCCCAGTTaGGTGTCCACTCACAACCCA +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINEPVPS*VSTHNP
Trigger: TGGGTTGTGAGTGGACACCCAACTGGGCACAGGCTC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGTGTTTGGAAAAAGGATaGGTGCCTGAGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQCLEKG*VPEPVP
Trigger: GGGCACAGGCTCAGGCACCCATCCTTTTTCCAAACA...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GAGGAGGGATGGGTAGCTGGTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTCATCACACCAGGACATaGAGTCTCTACATAACCACA +
Preference number: 4 (lower is better)
Translates to: EEGWVAGRVAILDLTAHGHHTRT*SLYITT
Trigger: TGTGGTTATGTAGAGACTCCATGTCCTGGTGTGATG...ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACCAGCTACCCATCCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCAAGCACATGGAGTCTTaGAGGCTTTCCTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PQEALTQAEAKGSNLHGLKHMES*RLSFPE
Trigger: CTCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTT...GAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGAGCTGCCCAAGCACATaGAGTCTTGGAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRSCPST*SLGGFP
Trigger: AGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCT...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCTGGGGTTCCACTGTGTaGCCTAATACGGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PAIIRKSPWGQQHTEHRSWGSTV*PNTGSN
Trigger: GTTGCTGCCCGTATTAGGCCACACAGTGGAACCCCA...GCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR CAA 72 bp TCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SGRQIGMGYPCG*SNDLHVKRQSL
Trigger: CAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CAA 72 bp CCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTaGGGGACAGCAGCATACAGAGCACAGAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PIPTPCHNKKEP*GTAAYRAQKPK
Trigger: CTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACCTCTCTTTTGGACATTaGTGTTGTCCCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENLSFGH*CCPTTW
Trigger: CCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAG...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGCTCTCTTTTGGACATTaGTGTTGTCCCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMLSFGH*CCPTTW
Trigger: CCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAG...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTATGTCTGCCTCCACATaGACTCTAGGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSMSAST*TLGCGW
Trigger: CCACCCACAGCCTAGAGTTCATGTGGAGGCAGACAT...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTCTTCCGTCAGGAGGGTaGAATCAGACAGTGGGTACC +
Preference number: 4 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSLPSGG*NQTVGT
Trigger: GGTACCCACTGTCTGATTTCACCCTCCTGACGGAAG...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATGGTGCCAGAGTCAATaGCACGGAGAGGAAACGCTT +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQWCQSQ*HGEETL
Trigger: AAGCGTTTCCTCTCCGTGTCATTGACTCTGGCACCA...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAAGTACGCAACCACCTCTaGGAAGAAAGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQVRNHL*EERAFS
Trigger: ACTGAAGGCCCTTTCTTCTCAGAGGTGGTTGCGTAC...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAGTACGCAACCACCTCTaGGAAGAAAGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGVRNHL*EERAFS
Trigger: ACTGAAGGCCCTTTCTTCTCAGAGGTGGTTGCGTAC...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGGATGTCCACCAGGGATaGTATGTCCAGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRDVHQG*YVQRQP
Trigger: GGGCTGTCTCTGGACATATCATCCCTGGTGGACATC...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGAAGTCACAGGGCAGTaGGGAAGCCAGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLEVTGQ*GSQRMK
Trigger: TTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTC...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAAGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAEGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGGCAATAAACAGAAAATaGGGGCAGAGCCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGAINRK*GQSPVC
Trigger: ACACACTGGGCTCTGCCCTCATTTTCTGTTTATTGC...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCTATGATCTCTGGCCATaGCAATCTCTAGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSYDLWP*QSLASP
Trigger: AGGACTCGCTAGAGATTGTCATGGCCAGAGATCATA...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTATGATCTCTGGCCATaGCAATCTCTAGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGYDLWP*QSLASP
Trigger: AGGACTCGCTAGAGATTGTCATGGCCAGAGATCATA...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGAGGTAATGGTGGCGTaGGAATCCTCTGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAEVMVA*ESSGNL
Trigger: CAGATTCCCAGAGGATTCTCACGCCACCATTACCTC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGCTCCAGCTGCTCAATaGGGTTCTGCAGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAAPAAQ*GSAAQK
Trigger: TTTCTGTGCTGCAGAACCGCATTGAGCAGCTGGAGC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGAAAAGCTGCTCCAGCTaGTCAATGCGGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVKSCSS*SMRFCS
Trigger: GCTGCAGAACCGCATTGAGCAGCTGGAGCAGCTTTT...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAAAAAGCTGCTCCAGCTaGTCAATGCGGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGKSCSS*SMRFCS
Trigger: GCTGCAGAACCGCATTGAGCAGCTGGAGCAGCTTTT...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTTCTCCTCCAAAAGCTaGTCCAGCTGCTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSFSSKS*SSCSMR
Trigger: CCGCATTGAGCAGCTGGAGCAGCTTTTGGAGGAGAA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGGAGATGTCGAAGCCTTaGCTCCACACACCACCATCC +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKREMSKP*LHTPPS
Trigger: GGATGGTGGTGTGTGGAGGCAAGGCTTCGACATCTC...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTCACCAGCCTTCGGACTaGCGCTCTCTTTTGGACATT +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSHQPSD*RSLLDI
Trigger: AATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTG...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGATCCGAGTCCCATGTCTaGCTCCACATGAACTCTAGG +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRSESHV*LHMNSR
Trigger: CCTAGAGTTCATGTGGAGGCAGACATGGGACTCGGA...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATCCGAGTCCCATGTCTaGCTCCACATGAACTCTAGG +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQSESHV*LHMNSR
Trigger: CCTAGAGTTCATGTGGAGGCAGACATGGGACTCGGA...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTATCCGAGTCCCATGTCTaGCTCCACATGAACTCTAGG +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLSESHV*LHMNSR
Trigger: CCTAGAGTTCATGTGGAGGCAGACATGGGACTCGGA...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGGACAGAAGATGTCTGTaGTGGAGTCCGAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVDRRCL*WSPSPM
Trigger: CATGGGACTCGGACTCCAGCACAGACATCTTCTGTC...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGACAGAAGATGTCTGTaGTGGAGTCCGAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCDRRCL*WSPSPM
Trigger: CATGGGACTCGGACTCCAGCACAGACATCTTCTGTC...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACCACCAGATAGTGGGCTaGATGAATGATGACCTGCTT +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENHQIVG*MNDDLL
Trigger: AAGCAGGTCATCATTCATGCAGCCCACTATCTGGTG...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGTATCTTGGACCTCACTaGCCACGGTTCGCCGCTCTA +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRYLGPH*PRFAAL
Trigger: TAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATA...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTTGCCCAGGGCTACCTTaGCTTGGCTTGTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSCPGLP*LGLWCS
Trigger: ACTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCA...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCCCAAATAGACGTCAGTaGTGTTGGACGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCPNRRQ*CWTGRP
Trigger: TGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGG...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGATCTCACTGGCGTCTaGCCTATTTACCCATCACTG +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQADLTGV*PIYPSL
Trigger: CAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAACCTAGAGCCTGCTGTTaGCACAGTGACCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGEPRACC*HSDPDA
Trigger: AGCATCAGGGTCACTGTGGCAACAGCAGGCTCTAGG...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGTGATTCCTTCTACTaGTCCATCCCCACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSSDSFY*SIPTAN
Trigger: GTTAGCAGTGGGGATGGAGCAGTAGAAGGAATCACT...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATAGGACCCCACACCCCTaGCACCATCCCACAAATCAG +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADRTPHP*HHPTNQ
Trigger: CTGATTTGTGGGATGGTGGCAGGGGTGTGGGGTCCT...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTAGGACCCCACACCCCTaGCACCATCCCACAAATCAG +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSRTPHP*HHPTNQ
Trigger: CTGATTTGTGGGATGGTGGCAGGGGTGTGGGGTCCT...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAACATTCTGGTGTCGGGTaGGATCGTGTTGCACTCGGT +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGEHSGVG*DRVALG
Trigger: ACCGAGTGCAACACGATCCCACCCGACACCAGAATG...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAAGTTCCCACCATTCTaGTGTCGGGTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLKFPPF*CRVGSC
Trigger: ACACGATCCCACCCGACACCAGAATGGTGGGAACTT...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCTGGCTGATAATCTCATaGTTCTCCTCCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVWLIIS*FSSKSC
Trigger: GCAGCTTTTGGAGGAGAACCATGAGATTATCAGCCA...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGACGGAGTCCTTGATATaGCTGATAATCTCATGGTTC +
Preference number: 4 (lower is better)
Translates to: VRLQGLPARRGAERLLKLTESLI*LIISWF
Trigger: GAACCATGAGATTATCAGCCATATCAAGGACTCCGT...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCAAAGTAGTGGGAATTaGCCTCATCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLQSSGN*PHLASP
Trigger: GGGTGATGCCAGATGAGGCCAATTCCCACTACTTTG...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTTTTCTCTCCAGCCACTaGTGTCCTTCGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCFLSSH*CPSMSW
Trigger: CCAGCTCATCGAAGGACACCAGTGGCTGGAGAGAAA...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCGCAGGTAAGGCATGGTaGAGCTGTATCCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PAIIRKSPWGQQHTEHRSAGKAW*SCIQRG
Trigger: ACCCCTTTGGATACAGCTCCACCATGCCTTACCTGC...GCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGCAGGTAAGGCATGGTaGAGCTGTATCCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLAGKAW*SCIQRG
Trigger: ACCCCTTTGGATACAGCTCCACCATGCCTTACCTGC...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGCAGCAGGTAAGGCATaGTGGAGCTGTATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAAAGKA*WSCIQR
Trigger: CCTTTGGATACAGCTCCACCATGCCTTACCTGCTGC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGAAGATGTCTGTGCTaGAGTCCGAGTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVRRCLC*SPSPMS
Trigger: AGACATGGGACTCGGACTCCAGCACAGACATCTTCT...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGATTGGCAGCAGATCTTaGGATCTGGGCCACAGGTAT +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLIGSRS*DLGHRY
Trigger: ATACCTGTGGCCCAGATCCCAAGATCTGCTGCCAAT...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTATTGGCAGCAGATCTTaGGATCTGGGCCACAGGTAT +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLIGSRS*DLGHRY
Trigger: ATACCTGTGGCCCAGATCCCAAGATCTGCTGCCAAT...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAATTGGCAGCAGATCTTaGGATCTGGGCCACAGGTAT +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQAIGSRS*DLGHRY
Trigger: ATACCTGTGGCCCAGATCCCAAGATCTGCTGCCAAT...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACTTGCTTCGGAACAGCTaGGACTTCTTCCGGTATTGG +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYLLRNS*DFFRYW
Trigger: CCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAA...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGCTCCACTCTTGTCTTTaGACGTACGGGTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRLHSCL*TYGCHR
Trigger: TCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAG...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCAGATAGACTAAAGGTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACTCCACTCTTGTCTTTaGACGTACGGGTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: ADRLKVRLQGLPARRGAELHSCL*TYGCHR
Trigger: TCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAG...TTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCACCTTTAGTCTATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCGATATAGGCCATGACTaGCATGGGGTAGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTDIGHD*HGVEVG
Trigger: GCCAACTTCTACCCCATGCCAGTCATGGCCTATATC...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGTAGAGTGGCTATCTTaGACCTCACTGCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: LLSLISLASALFTHHWVCVEWLS*TSLPTV
Trigger: AACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTAGAGTGGCTATCTTaGACCTCACTGCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAVEWLS*TSLPTV
Trigger: AACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGGTAGAGTGGCTATCTTaGACCTCACTGCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVVEWLS*TSLPTV
Trigger: AACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTAGGGCTACCTTGCCTTaGCTTGTGGTGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPARATLP*LVVQLK
Trigger: CTTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCT...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTAGACGTCAGTGCTGTTaGACGGGGAGGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCRRQCC*TGRPEG
Trigger: ACCCTCTGGCCTCCCCGTCCAACAGCACTGACGTCT...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR CCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTGGAGGCAGATCGGGATaGGATACCCGTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSGGRSG*DTRVAC
Trigger: ACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGTGTGTCACAGTTCTaGGAGGCAGATCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINSVSQF*EADRDG
Trigger: CCCATCCCGATCTGCCTCCCAGAACTGTGACACACT...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTCCATCACTGGGTTTGTaGGTTGCGCCGAAAACACAG +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAPSLGL*VAPKTQ
Trigger: CTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGG...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCTATTTACCCATCACTaGGTTTGTGGGTTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQLFTHH*VCGLRR
Trigger: TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAG...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGCAGGAAGAGGTAGGCTCCACTCTTGTCTTTGGACGTACGGGTGCCATAGACCATCACACCAGGACATaGAGTCTCTACATAACCACA +
Preference number: 4 (lower is better)
Translates to: GQEEVGSTLVFGRTGAIDHHTRT*SLYITT
Trigger: TGTGGTTATGTAGAGACTCCATGTCCTGGTGTGATG...GTCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAGCCTACCTCTTCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS-3UTR CCA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTTATGTTCCTCATCTaGCTTGTTGCAGGGGTTAGT +
Preference number: 4 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGLMFLI*LVAGVS
Trigger: ACTAACCCCTGCAACAAGCCAGATGAGGAACATAAG...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGGGCGTGAGAATCCTCTaGGAATCTGGCAGGATCACC +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRGVRIL*ESGRIT
Trigger: GGTGATCCTGCCAGATTCCCAGAGGATTCTCACGCC...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTACTTGTCAAAGGTCTTaGTCCAGCCTGGGTCATTGT +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFTCQRS*SSLGHC
Trigger: ACAATGACCCAGGCTGGATCAAGACCTTTGACAAGT...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACCTCTCTTTTGGACATTaGTGTTGTCCCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYLSFGH*CCPTTW
Trigger: CCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAG...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGACTGGTGTCCTTCGATaGGCTGGTCAATCAATGCAA +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRTGVLR*AGQSMQ
Trigger: TTGCATTGATTGACCAGCTCATCGAAGGACACCAGT...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCCAAATAGACGTCAGTGCTACTGGTGTCCTTCGATaGGCTGGTCAATCAATGCAA +
Preference number: 4 (lower is better)
Translates to: QAEAKGSNLHGLQIDVSATGVLR*AGQSMQ
Trigger: TTGCATTGATTGACCAGCTCATCGAAGGACACCAGT...AGCACTGACGTCTATTTGGAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR TCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGCAGCAAAGTGCTTCTTaGTGGCATAGTGCACTCTCT +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRQQSAS*WHSALS
Trigger: AGAGAGTGCACTATGCCATCAAGAAGCACTTTGCTG...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTAGAGCCGTTGGTAGTTaGAGAACTGGGCATCCCACT +
Preference number: 4 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSRAVGS*RTGHPT
Trigger: AGTGGGATGCCCAGTTCTTCAACTACCAACGGCTCT...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTGAGCCCAGTAAGGCCTaGGAACCAGACCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSEPSKA*EPDLHV
Trigger: TACATGCAGGTCTGGTTCTCAGGCCTTACTGGGCTC...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCGTACGCAACCACCTCTaGGAAGAAAGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCVRNHL*EERAFS
Trigger: ACTGAAGGCCCTTTCTTCTCAGAGGTGGTTGCGTAC...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTGATGTCCACCAGGGATaGTATGTCCAGAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSDVHQG*YVQRQP
Trigger: GGGCTGTCTCTGGACATATCATCCCTGGTGGACATC...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCVKEVG*RNTTSR
Trigger: CCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGAC...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGGCAATAAACAGAAAATaGGGGCAGAGCCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQAINRK*GQSPVC
Trigger: ACACACTGGGCTCTGCCCTCATTTTCTGTTTATTGC...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGGCAATAAACAGAAAATaGGGGCAGAGCCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLAINRK*GQSPVC
Trigger: ACACACTGGGCTCTGCCCTCATTTTCTGTTTATTGC...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACCCACACACTGTCACCTaGTTTTTCAGCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENPHTVT*FFSFIL
Trigger: CAGTATGAAGCTGAAAAAGCAGGTGACAGTGTGTGG...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGCCACACACTGTCACCTaGTTTTTCAGCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMPHTVT*FFSFIL
Trigger: CAGTATGAAGCTGAAAAAGCAGGTGACAGTGTGTGG...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCTTCTCCTCCAAAAGCTaGTCCAGCTGCTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCFSSKS*SSCSMR
Trigger: CCGCATTGAGCAGCTGGAGCAGCTTTTGGAGGAGAA...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCACACCAGATAGTGGGCTaGATGAATGATGACCTGCTT +
Preference number: 4 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQAHQIVG*MNDDLL
Trigger: AAGCAGGTCATCATTCATGCAGCCCACTATCTGGTG...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGCACCAGATAGTGGGCTaGATGAATGATGACCTGCTT +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRHQIVG*MNDDLL
Trigger: AAGCAGGTCATCATTCATGCAGCCCACTATCTGGTG...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACCACCAGATAGTGGGCTaGATGAATGATGACCTGCTT +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHHQIVG*MNDDLL
Trigger: AAGCAGGTCATCATTCATGCAGCCCACTATCTGGTG...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCCAGAGGAGGGCAGCGTaGGGTGCCCATCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSQRRAA*GAHPGP
Trigger: TGGGCCTGGATGGGCACCGCACGCTGCCCTCCTCTG...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTGGCCATGGAAAAGGCTaGCCAGGGCTACCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCGHGKG*PGLPCL
Trigger: AAGGCAAGGTAGCCCTGGGCAGCCTTTTCCATGGCC...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR GCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCCAAATAGACGTCAGTaGTGTTGGACGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADPNRRQ*CWTGRP
Trigger: TGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGG...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAATGGAAAAAGGATGGGTaGCTGAGCCTGTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGEWKKDG*LSLCPV
Trigger: AACTGGGCACAGGCTCAGGCACCCATCCTTTTTCCA...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTGATTCCCCTAGAGCCTaGTGTTGCCACAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSDSPRA*CCHSDP
Trigger: AGGGTCACTGTGGCAACAGCAGGCTCTAGGGGAATC...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACAGTGATTCCTTCTACTaGTCCATCCCCACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHSDSFY*SIPTAN
Trigger: GTTAGCAGTGGGGATGGAGCAGTAGAAGGAATCACT...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTAGTGATTCCTTCTACTaGTCCATCCCCACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFSDSFY*SIPTAN
Trigger: GTTAGCAGTGGGGATGGAGCAGTAGAAGGAATCACT...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTCTGTTAGCCAATGCATaGAGGCCAGGCGGCACTTAC +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSLLANA*RPGGTY
Trigger: GTAAGTGCCGCCTGGCCTGCATGCATTGGCTAACAG...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACCTGCCACAGTGGAACTaGTTAGCATCCTTTACTAGT +
Preference number: 4 (lower is better)
Translates to: HWRLPYLPITGFVGCAENLPQWN*LASFTS
Trigger: ACTAGTAAAGGATGCTAAGCAGTTCCACTGTGGCAG...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTGAGCTTTGTCGCCTCTaGGTTGTGCCCTACTTAGCG +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCELCRL*VVPYLA
Trigger: CGCTAAGTAGGGCACAACGCAGAGGCGACAAAGCTC...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559717.6
CDS-3UTR CCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCTGCCACACAGAAGATaGCAGCCCCACACACTGTCA +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADLPHRR*QPHTLS
Trigger: TGACAGTGTGTGGGGCTGCCATCTTCTGTGTGGCAG...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATGGCTGATAATCTCATaGTTCTCCTCCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAWLIIS*FSSKSC
Trigger: GCAGCTTTTGGAGGAGAACCATGAGATTATCAGCCA...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGACTGCCGCTCTCTTTTaGACATTGATGTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLTAALF*TLMLSH
Trigger: GTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGT...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGACTGCCGCTCTCTTTTaGACATTGATGTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQTAALF*TLMLSH
Trigger: GTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGT...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTTTTCTCTCCAGCCACTaGTGTCCTTCGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSFLSSH*CPSMSW
Trigger: CCAGCTCATCGAAGGACACCAGTGGCTGGAGAGAAA...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTATGAACTCTAGGCTGTaGGTGGCAGCAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSMNSRL*VAAKCF
Trigger: GAAGCACTTTGCTGCCACCCACAGCCTAGAGTTCAT...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTATTGGCAGCAGATCTTaGGATCTGGGCCACAGGTAT +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAIGSRS*DLGHRY
Trigger: ATACCTGTGGCCCAGATCCCAAGATCTGCTGCCAAT...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTCGTTTGAAATCAAATTaGCAGCAGATCTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIRLKSN*QQILGS
Trigger: AGATCCCAAGATCTGCTGCCAATTTGATTTCAAACG...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATTGCTTCGGAACAGCTaGGACTTCTTCCGGTATTGG +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQLLRNS*DFFRYW
Trigger: CCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAA...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACATAGGACCACAAACCTaGGCGAGGAATCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINIGPQT*ARNPAG
Trigger: TCCAGCTGGATTCCTCGCCCAGGTTTGTGGTCCTAT...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCTCCACTCTTGTCTTTaGACGTACGGGTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: PAIIRKSPWGQQHTEHRSLHSCL*TYGCHR
Trigger: TCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAG...GCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTGTGAAGAAGATACCCTaGCTGTCGATGTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLVKKIP*LSMSVW
Trigger: CCATACAGACATCGACAGCCAGGGTATCTTCTTCAC...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000559717.6
CDS-3UTR CCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACGTGAAGAAGATACCCTaGCTGTCGATGTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHVKKIP*LSMSVW
Trigger: CCATACAGACATCGACAGCCAGGGTATCTTCTTCAC...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGTGAAGAAGATACCCTaGCTGTCGATGTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYVKKIP*LSMSVW
Trigger: CCATACAGACATCGACAGCCAGGGTATCTTCTTCAC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360468.7
ENST00000559717.6
ENST00000561448.5
CDS-3UTR CCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGAGATATAGGCCATGACTaGCATGGGGTAGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRDIGHD*HGVEVG
Trigger: GCCAACTTCTACCCCATGCCAGTCATGGCCTATATC...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATATAGGCCATGACTaGCATGGGGTAGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSDIGHD*HGVEVG
Trigger: GCCAACTTCTACCCCATGCCAGTCATGGCCTATATC...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRVAEEG*VAGRVA
Trigger: AGCCACTCTACCAGCTACCCATCCCTCCTCAGCCAC...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAAGGGCTACCTTGCCTTaGCTTGTGGTGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGERATLP*LVVQLK
Trigger: CTTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCT...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTAGGGCTACCTTGCCTTaGCTTGTGGTGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSRATLP*LVVQLK
Trigger: CTTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCT...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCACATCACACCAGGACATaGAGTCTCTACATAACCACA +
Preference number: 4 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAHHTRT*SLYITT
Trigger: TGTGGTTATGTAGAGACTCCATGTCCTGGTGTGATG...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGAAGCACATGGAGTCTTaGAGGCTTTCCTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQKHMES*RLSFPE
Trigger: CTCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTT...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAAGCTGCCCAAGCACATaGAGTCTTGGAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGESCPST*SLGGFP
Trigger: AGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCT...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAACAACTCTGATGACCTaGAAGAACTCAGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GTYCKAITESSEAFRLLGTTLMT*KNSALS
Trigger: TGAGAGGGCTGAGTTCTTCCAGGTCATCAGAGTTGT...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAACACCAGGCAGGCGTTTaGAATCAAATTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGEHQAGV*NQIGSR
Trigger: TCTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTG...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTGTACGCAACCACCTCTaGGAAGAAAGGGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSVRNHL*EERAFS
Trigger: ACTGAAGGCCCTTTCTTCTCAGAGGTGGTTGCGTAC...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR TCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATGAGGTAATGGTGGCGTaGGAATCCTCTGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADEVMVA*ESSGNL
Trigger: CAGATTCCCAGAGGATTCTCACGCCACCATTACCTC...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTTGCTCAATGCGGTTCTaGAGCACAGAAATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPACSMRF*STEIWL
Trigger: GAGCCAAATTTCTGTGCTGCAGAACCGCATTGAGCA...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTGCTCAATGCGGTTCTaGAGCACAGAAATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSCSMRF*STEIWL
Trigger: GAGCCAAATTTCTGTGCTGCAGAACCGCATTGAGCA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGTGCTCAATGCGGTTCTaGAGCACAGAAATTTGGCTC +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVCSMRF*STEIWL
Trigger: GAGCCAAATTTCTGTGCTGCAGAACCGCATTGAGCA...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACAATAGTCAGAAAGAGTaGCAAACTGGGCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHNSQKE*QTGPAH
Trigger: ATGTGCAGGCCCAGTTTGGCACTCTTTCTGACTATT...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGAATAGTCAGAAAGAGTaGCAAACTGGGCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQNSQKE*QTGPAH
Trigger: ATGTGCAGGCCCAGTTTGGCACTCTTTCTGACTATT...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCATGTCTGTATGGATGTaGAGGGCCAGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCMSVWM*RASSLL
Trigger: CAACAAGGAGCTGGCCCTGCACATCCATACAGACAT...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAATGTCTGTATGGATGTaGAGGGCCAGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TYCKAITESSEAFRLLGEMSVWM*RASSLL
Trigger: CAACAAGGAGCTGGCCCTGCACATCCATACAGACAT...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTCCAAATAGACGTCAGTaGTGTTGGACGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCPNRRQ*CWTGRP
Trigger: TGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGG...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR GCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGAGTGATTCCTTCTACTaGTCCATCCCCACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVSDSFY*SIPTAN
Trigger: GTTAGCAGTGGGGATGGAGCAGTAGAAGGAATCACT...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR GCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTCCTGCACAGCCATACTaGCTCCTCATATACTCTACA +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAPAQPY*LLIYST
Trigger: TGTAGAGTATATGAGGAGGCAGTATGGCTGTGCAGG...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTCTGACTCTTTAGAATaGCATCACTGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QAALTAKPSQKAARPSDSSDSLE*HHCWFL
Trigger: CAGAAACCAACAGTGATGGCATTCTAAAGAGTCAGA...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCATCTGACTCTTTAGAATaGCATCACTGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPSDSLE*HHCWFL
Trigger: CAGAAACCAACAGTGATGGCATTCTAAAGAGTCAGA...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTAAGTTCCCACCATTCTaGTGTCGGGTGGGATCGTGT +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSKFPPF*CRVGSC
Trigger: ACACGATCCCACCCGACACCAGAATGGTGGGAACTT...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAACGGAGTCCTTGATATaGCTGATAATCTCATGGTTC +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLTESLI*LIISWF
Trigger: GAACCATGAGATTATCAGCCATATCAAGGACTCCGT...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAACTGCCGCTCTCTTTTaGACATTGATGTTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLTAALF*TLMLSH
Trigger: GTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGT...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCCAAAGTAGTGGGAATTaGCCTCATCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCQSSGN*PHLASP
Trigger: GGGTGATGCCAGATGAGGCCAATTCCCACTACTTTG...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTGCAGGTAAGGCATGGTaGAGCTGTATCCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSAGKAW*SCIQRG
Trigger: ACCCCTTTGGATACAGCTCCACCATGCCTTACCTGC...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGATGAACTCTAGGCTGTaGGTGGCAGCAAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRMNSRL*VAAKCF
Trigger: GAAGCACTTTGCTGCCACCCACAGCCTAGAGTTCAT...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGCTCCGTTTGAAATCAAATTaGCAGCAGATCTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: PQEALTQAEAKGSNLHGLRLKSN*QQILGS
Trigger: AGATCCCAAGATCTGCTGCCAATTTGATTTCAAACG...GAGCCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCGTTTGAAATCAAATTaGCAGCAGATCTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVRLKSN*QQILGS
Trigger: AGATCCCAAGATCTGCTGCCAATTTGATTTCAAACG...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACCTCCACTCTTGTCTTTaGACGTACGGGTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINLHSCL*TYGCHR
Trigger: TCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAG...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCGATATAGGCCATGACTaGCATGGGGTAGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCDIGHD*HGVEVG
Trigger: GCCAACTTCTACCCCATGCCAGTCATGGCCTATATC...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATAGGGCTACCTTGCCTTaGCTTGTGGTGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADRATLP*LVVQLK
Trigger: CTTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCT...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTATTTTCAGCTTCATACTaGCCTCCACACACACCGTCA +
Preference number: 4 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLFSASY*PPHTPS
Trigger: TGACGGTGTGTGTGGAGGCCAGTATGAAGCTGAAAA...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CCA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTTTTCAGCTTCATACTaGCCTCCACACACACCTGCT +
Preference number: 4 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSFSASY*PPHTPA
Trigger: AGCAGGTGTGTGTGGAGGCCAGTATGAAGCTGAAAA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559717.6
3UTR CAA 72 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGCAGCAATAAACAGAAA +
Preference number: 4 (lower is better)
Translates to: ASALFTHHWVCG*RRKHSSSNKQK
Trigger: TTTCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
3UTR CAA 72 bp CATCCCACAAATCAGTACATAGGCCAAGTGCCCAGTTaGCCAGGGGTCTTGCTACCTGAAGTGACCTATGAT +
Preference number: 4 (lower is better)
Translates to: HPTNQYIGQVPS*PGVLLPEVTYD
Trigger: ATCATAGGTCACTTCAGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGCCTATGTACTGATTTGTGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGACTGGTGTCCTTCGATaGGCTGGTCAATCAATGCAA +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRTGVLR*AGQSMQ
Trigger: TTGCATTGATTGACCAGCTCATCGAAGGACACCAGT...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTGTCAAGGAGGTTGGCTaGAGGAATACCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCVKEVG*RNTTSR
Trigger: CCTGGATGTGGTATTCCTTCAGCCAACCTCCTTGAC...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR TCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTCCACACACTGTCACCTaGTTTTTCAGCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAPHTVT*FFSFIL
Trigger: CAGTATGAAGCTGAAAAAGCAGGTGACAGTGTGTGG...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAAAATAGTCAGAAAGAGTaGCAAACTGGGCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQNSQKE*QTGPAH
Trigger: ATGTGCAGGCCCAGTTTGGCACTCTTTCTGACTATT...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCCCAGGGCCTGGGAGCTaGATCCTGGCTACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSPGPGS*ILATGR
Trigger: TCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCTGG...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTTCCTTCCTGCCATTCTaGAGCCTGTTAGCCAATGCA +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCSFLPF*SLLANA
Trigger: TGCATTGGCTAACAGGCTGCAGAATGGCAGGAAGGA...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACTGCCACAGTGGAACTaGTTAGCATCCTTTACTAGT +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGLPQWN*LASFTS
Trigger: ACTAGTAAAGGATGCTAAGCAGTTCCACTGTGGCAG...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTTGGCTGATAATCTCATaGTTCTCCTCCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAWLIIS*FSSKSC
Trigger: GCAGCTTTTGGAGGAGAACCATGAGATTATCAGCCA...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGACGGAGTCCTTGATATaGCTGATAATCTCATGGTTC +
Preference number: 4 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRTESLI*LIISWF
Trigger: GAACCATGAGATTATCAGCCATATCAAGGACTCCGT...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGATGTTGTCCCACCACTTaGCGAAGAAGGAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRCCPTT*RRRRPL
Trigger: CAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACA...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATAGAAGATGTCTGTGCTaGAGTCCGAGTCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADRRCLC*SPSPMS
Trigger: AGACATGGGACTCGGACTCCAGCACAGACATCTTCT...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGCGTTTGAAATCAAATTaGCAGCAGATCTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: LSLISLASALFTHHWVCGRLKSN*QQILGS
Trigger: AGATCCCAAGATCTGCTGCCAATTTGATTTCAAACG...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTTTGCTTCGGAACAGCTaGGACTTCTTCCGGTATTGG +
Preference number: 4 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCLLRNS*DFFRYW
Trigger: CCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAA...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTTTCTATATCCCTGTTTaGAAAAAGGATGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVFYIPV*KKDGCL
Trigger: CAGGCACCCATCCTTTTTCCAAACAGGGATATAGAA...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGAATGCCATCACTGTTaGTTTCTGAAACAGACCTTT +
Preference number: 4 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYECHHC*FLKQTF
Trigger: AAAGGTCTGTTTCAGAAACCAACAGTGATGGCATTC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGCTTATGTTCCTCATCTaGCTTGTTGCAGGGGTTAGT +
Preference number: 4 (lower is better)
Translates to: MESLHNHRIPLEPAVATVLMFLI*LVAGVS
Trigger: ACTAACCCCTGCAACAAGCCAGATGAGGAACATAAG...CACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTGGCAGTCTCTGTGAATaGACTTTCTCTTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCGSLCE*TFSSGH
Trigger: GTGGCCTGAAGAGAAAGTTCATTCACAGAGACTGCC...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR TCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTGCAATAAACAGAAAATaGGGGCAGAGCCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSAINRK*GQSPVC
Trigger: ACACACTGGGCTCTGCCCTCATTTTCTGTTTATTGC...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGCTATTTCTTCTGCTATaGTATAAATGGGGTTCCACT +
Preference number: 4 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMLFLLL*YKWGST
Trigger: AGTGGAACCCCATTTATATCATAGCAGAAGAAATAG...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGTCTGACTCTTTAGAATaGCATCACTGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQSDSLE*HHCWFL
Trigger: CAGAAACCAACAGTGATGGCATTCTAAAGAGTCAGA...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGTCTGACTCTTTAGAATaGCATCACTGTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLSDSLE*HHCWFL
Trigger: CAGAAACCAACAGTGATGGCATTCTAAAGAGTCAGA...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTATTCACTCTCCCAAATaGACTTTAGAACTGTCAATT +
Preference number: 4 (lower is better)
Translates to: PTLTKGLLSLISLASALFIHSPK*TLELSI
Trigger: AATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAAT...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGAACGGAGTCCTTGATATaGCTGATAATCTCATGGTTC +
Preference number: 4 (lower is better)
Translates to: PITGFVGCAENTAAAINRTESLI*LIISWF
Trigger: GAACCATGAGATTATCAGCCATATCAAGGACTCCGT...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAACTGGTGTCCTTCGATaGGCTGGTCAATCAATGCAA +
Preference number: 4 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRTGVLR*AGQSMQ
Trigger: TTGCATTGATTGACCAGCTCATCGAAGGACACCAGT...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCGCAGGGACACCATGCTaGATCGCTCCTGTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSAGTPC*IAPVPV
Trigger: CACTGGAACAGGAGCGATTCAGCATGGTGTCCCTGC...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACTGAATTTATCAGCTaGTTTGGGGAAAACCAGTAT +
Preference number: 4 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHTEFIS*FGENQY
Trigger: ATACTGGTTTTCCCCAAATCAGCTGATAAATTCAGT...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCTATTTCTTCTGCTATaGTATAAATGGGGTTCCACT +
Preference number: 4 (lower is better)
Translates to: SLISLASALFTHHWVCGLLFLLL*YKWGST
Trigger: AGTGGAACCCCATTTATATCATAGCAGAAGAAATAG...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCCACACACTGTCACCTaGTTTTTCAGCTTCATACTG +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADPHTVT*FFSFIL
Trigger: CAGTATGAAGCTGAAAAAGCAGGTGACAGTGTGTGG...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR GCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCCAGCCTGTTAGCCAATaGATGCAGGCCAGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: THSLSQMHFRTVNSKVSIQPVSQ*MQARRH
Trigger: GTGCCGCCTGGCCTGCATGCATTGGCTAACAGGCTG...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAATTCACTCTCCCAAATaGACTTTAGAACTGTCAATT +
Preference number: 4 (lower is better)
Translates to: GGTYCKAITESSEAFRLLIHSPK*TLELSI
Trigger: AATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAAT...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAACGTTTGAAATCAAATTaGCAGCAGATCTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQRLKSN*QQILGS
Trigger: AGATCCCAAGATCTGCTGCCAATTTGATTTCAAACG...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTCATCACACCAGGACATaGAGTCTCTACATAACCACA +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSHHTRT*SLYITT
Trigger: TGTGGTTATGTAGAGACTCCATGTCCTGGTGTGATG...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAGAATGCCATCACTGTTaGTTTCTGAAACAGACCTTT +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGECHHC*FLKQTF
Trigger: AAAGGTCTGTTTCAGAAACCAACAGTGATGGCATTC...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTATTTATCAGCTGATTTaGGGAAAACCAGTATGTGGA +
Preference number: 4 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVIYQLI*GKPVCG
Trigger: TCCACATACTGGTTTTCCCCAAATCAGCTGATAAAT...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCAAAAGGATGGGTGCCTaGGCCTGTGCCCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: THSLSQMHFRTVNSKVSIKRMGA*ACAQLG
Trigger: ACCCAACTGGGCACAGGCTCAGGCACCCATCCTTTT...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCTGCATGTCCACCTGCTaGTCGTGCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: THSLSQMHFRTVNSKVSICMSTC*SCSSST
Trigger: GGTGGATGAGGAGCACGAGCAGCAGGTGGACATGCA...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCCCTAGAGCCTGCTGTTaGCACAGTGACCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSPRACC*HSDPDA
Trigger: AGCATCAGGGTCACTGTGGCAACAGCAGGCTCTAGG...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTTTCTATATCCCTGTTTaGAAAAAGGATGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ITESSEAFRLLGETVIPSFYIPV*KKDGCL
Trigger: CAGGCACCCATCCTTTTTCCAAACAGGGATATAGAA...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGGAATGCCATCACTGTTaGTTTCTGAAACAGACCTTT +
Preference number: 4 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRECHHC*FLKQTF
Trigger: AAAGGTCTGTTTCAGAAACCAACAGTGATGGCATTC...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CCA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTCTTATGTTCCTCATCTaGCTTGTTGCAGGGGTTAGT +
Preference number: 4 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCLMFLI*LVAGVS
Trigger: ACTAACCCCTGCAACAAGCCAGATGAGGAACATAAG...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR CCA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCATGATGTGTATCATTaGGTTGACTTACAGAATACT +
Preference number: 4 (lower is better)
Translates to: AERLLKLPKHMESWRLSFHDVYH*VDLQNT
Trigger: AGTATTCTGTAAGTCAACCCAATGATACACATCATG...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGACATGATGTGTATCATTaGGTTGACTTACAGAATACT +
Preference number: 4 (lower is better)
Translates to: GTYCKAITESSEAFRLLGHDVYH*VDLQNT
Trigger: AGTATTCTGTAAGTCAACCCAATGATACACATCATG...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAATTTATCAGCTGATTTaGGGAAAACCAGTATGTGGA +
Preference number: 4 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGIYQLI*GKPVCG
Trigger: TCCACATACTGGTTTTCCCCAAATCAGCTGATAAAT...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCAGCCTCCTAAGTAACTaGGATTACAGGCGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSSLLSN*DYRRAP
Trigger: TGGCGCGCGCCTGTAATCCCAGTTACTTAGGAGGCT...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACACTGAATTTATCAGCTaGTTTGGGGAAAACCAGTAT +
Preference number: 4 (lower is better)
Translates to: LPITGFVGCAENTAAAINTEFIS*FGENQY
Trigger: ATACTGGTTTTCCCCAAATCAGCTGATAAATTCAGT...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTTCTGACTCTTTAGAATaGCATCACTGTTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCSDSLE*HHCWFP
Trigger: CGGAAACCAACAGTGATGGCATTCTAAAGAGTCAGA...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR CCA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCTGTTTGGAAAAAGGATaGGTGCCTGAGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSCLEKG*VPEPVP
Trigger: GGGCACAGGCTCAGGCACCCATCCTTTTTCCAAACA...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATGAATGCCATCACTGTTaGTTTCTGAAACAGACCTTT +
Preference number: 4 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADECHHC*FLKQTF
Trigger: AAAGGTCTGTTTCAGAAACCAACAGTGATGGCATTC...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR TCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCGAAGTCACAGGGCAGTaGGGAAGCCAGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: THSLSQMHFRTVNSKVSIEVTGQ*GSQRMK
Trigger: TTTCATCCTCTGGCTTCCTCACTGCCCTGTGACTTC...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCTCCGAGTCCCATGTCTaGCTCCACATGAACTCTAGG +
Preference number: 4 (lower is better)
Translates to: THSLSQMHFRTVNSKVSISESHV*LHMNSR
Trigger: CCTAGAGTTCATGTGGAGGCAGACATGGGACTCGGA...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR GCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCCTTTGGACGTACGGGTaGCATAGACAAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: THSLSQMHFRTVNSKVSILWTYG*HRQGPA
Trigger: TGCAGGTCCTTGTCTATGGCACCCGTACGTCCAAAG...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCTGTTTGGAAAAAGGATaGGTGCCTGAGCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: THSLSQMHFRTVNSKVSICLEKG*VPEPVP
Trigger: GGGCACAGGCTCAGGCACCCATCCTTTTTCCAAACA...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR TCA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCACTTGTCAAAGGTCTTaGTCCAGCCTGGGTCATTGT +
Preference number: 4 (lower is better)
Translates to: THSLSQMHFRTVNSKVSITCQRS*SSLGHC
Trigger: ACAATGACCCAGGCTGGATCAAGACCTTTGACAAGT...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
3UTR CAA 72 bp CAGTATGTGGACAGGAACATGATGTGTATCATTGGGTaGACTTACAGAATACTCTTAACAGGTCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: QYVDRNMMCIIG*TYRILLTGLQL
Trigger: CAACTGAAGACCTGTTAAGAGTATTCTGTAAGTCAACCCAATGATACACATCATGTTCCTGTCCACATACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS GCA 90 bp CCCTCGGGCTCCGCTTGCCTGCTCAGGAGGAAGGAGGACGCTAACTaGGGAGCCGAGCGTGGGCGGGACCGCGCTCCGGAGTCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: PSGSACLLRRKEDAN*GAERGRDRAPESAP
Trigger: CGGAGCAGACTCCGGAGCGCGGTCCCGCCCACGCTCGGCTCCGCAGTTAGCGTCCTCCTTCCTCCTGAGCAGGCAAGCGGAGCCCGAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558290.5
CDS CCA 90 bp CCGAGCGTGGGCGGGACCGCGCTCCGGAGTCTGCTCCGCGGGCCCTaGGGCCGAGGAGCTTTGTCGCCTCTGCGTTGTGCCCTACTTAGC +
Preference number: 5 (lower is better)
Translates to: PSVGGTALRSLLRGP*GRGALSPLRCALLS
Trigger: GCTAAGTAGGGCACAACGCAGAGGCGACAAAGCTCCTCGGCCCCAGGGCCCGCGGAGCAGACTCCGGAGCGCGGTCCCGCCCACGCTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558290.5
ENST00000558853.5
ENST00000559717.6
ENST00000560534.2
CDS GCA 90 bp ACAGCTGCCGGCCGTGCAGGTAGATGCGCACAGAGGAGGGCAGCGTaGGGTGCCCATCCAGGCCCAGCTGTAGCTGCAGCACGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: TAAGRAGRCAQRRAA*GAHPGPAVAAARPG
Trigger: GCCTGGGCGTGCTGCAGCTACAGCTGGGCCTGGATGGGCACCGCACGCTGCCCTCCTCTGTGCGCATCTACCTGCACGGCCGGCAGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559374.1
ENST00000559717.6
ENST00000560451.5
ENST00000560616.5
ENST00000561047.1
CDS GCA 90 bp CGGCCTCACCCGGCTCCGGCCCAGGTAGCCTTAGGTCTCTGTCGTTaGGCCCCTCGGGCAAAGGGGTGCTGCCTCCTGTCGGTACAGCGC +
Preference number: 5 (lower is better)
Translates to: RPHPAPAQVALGLCR*APRAKGCCLLSVQR
Trigger: GCGCTGTACCGACAGGAGGCAGCACCCCTTTGCCCGAGGGGCGCAACGACAGAGACCTAAGGCTACCTGGGCCGGAGCCGGGTGAGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558290.5
ENST00000558853.5
CDS GCA 90 bp TGGGCTGACCCAGGAGGCTGCTGCTTCCGACCAGGGCAAGCGCCCTaGACTGGTTCAGCACATGCTGGGGCAGAGGGGCCTGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: WADPGGCCFRPGQAP*TGSAHAGAEGPESQ
Trigger: CTGGCTCTCAGGCCCCTCTGCCCCAGCATGTGCTGAACCAGTGCAGGGCGCTTGCCCTGGTCGGAAGCAGCAGCCTCCTGGGTCAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560192.5
ENST00000560505.1
CDS GCA 90 bp CTGAGATGGCCCAGGCCCCGGTCCACTGTGGGTCAGGTGGCAGAATaGTCACAGGGCCGGGAGGCCGCTCTGCACAGTGCCACCACCACA +
Preference number: 5 (lower is better)
Translates to: LRWPRPRSTVGQVAE*SQGREAALHSATTT
Trigger: TGTGGTGGTGGCACTGTGCAGAGCGGCCTCCCGGCCCTGTGAGCATTCTGCCACCTGACCCACAGTGGACCGGGGCCTGGGCCATCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559374.1
CDS CCA 90 bp GTAATCTGCGGCTTCACGAGCGATGCCACATCCACAGTGCCAGCCTaGCTCTCAGGCCCAGCGCGGCCGGGGCTCTGCCAGCAGGGCTAC +
Preference number: 5 (lower is better)
Translates to: VICGFTSDATSTVPA*LSGPARPGLCQQGY
Trigger: GTAGCCCTGCTGGCAGAGCCCCGGCCGCGCTGGGCCTGAGAGCCAGGCTGGCACTGTGGATGTGGCATCGCTCGTGAAGCCGCAGATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559558.1
CDS TCA 90 bp TCGGTGGCAGAGCTCCAGTGTGCGCTGATCTGCACGGCCAGGGGCTaGCCCTCCTCCGAAAGGACACGCACGCGGGGAGAGTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: SVAELQCALICTARG*PSSERTRTRGELTS
Trigger: GCTGGTCAACTCTCCCCGCGTGCGTGTCCTTTCGGAGGAGGGTCAGCCCCTGGCCGTGCAGATCAGCGCACACTGGAGCTCTGCCACCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559374.1
ENST00000559717.6
ENST00000560451.5
ENST00000560616.5
ENST00000561240.1
CDS GCA 90 bp GACAGTGCCCAGGGAAGTGGGCGCAGGGCTTTCAGAGATCGGAGATaGAGCAGCGCCTCTGCCCAGAGGCAGTGCTGGCACAGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: DSAQGSGRRAFRDRR*SSASAQRQCWHREA
Trigger: CGCCTCCCTGTGCCAGCACTGCCTCTGGGCAGAGGCGCTGCTGCATCTCCGATCTCTGAAAGCCCTGCGCCCACTTCCCTGGGCACTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560880.1
CDS CCA 90 bp GCAGTCCTGCGGGGAGATGGAGAAGAAGCTGGGCCGGGGCTCCGGTaGCACCACCCAGGAGCCATTGACCGTGTAGTAGGGCAGCATGGC +
Preference number: 5 (lower is better)
Translates to: AVLRGDGEEAGPGLR*HHPGAIDRVVGQHG
Trigger: GCCATGCTGCCCTACTACACGGTCAATGGCTCCTGGGTGGTGCCACCGGAGCCCCGGCCCAGCTTCTTCTCCATCTCCCCGCAGGACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000559999.5
ENST00000560192.5
ENST00000560451.5
CDS CCA 90 bp CAGGGCTGCCCTCTCTGCCACGTTGGCCTCTGTGATGGCCCGGGGTaGCACCTTCCAAGGGCAGTTGATGCGCCCACCAGGCAGGCGTTT +
Preference number: 5 (lower is better)
Translates to: QGCPLCHVGLCDGPG*HLPRAVDAPTRQAF
Trigger: AAACGCCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGGTGCCACCCCGGGCCATCACAGAGGCCAACGTGGCAGAGAGGGCAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS CCA 90 bp CGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCTaGCCTGGGGAAGCAAACAGTGAGTGCTGGCCCGCCCCCACCCCC +
Preference number: 5 (lower is better)
Translates to: RLSSCISRRSKITSS*PGEANSECWPAPTP
Trigger: GGGGGTGGGGGCGGGCCAGCACTCACTGTTTGCTTCCCCAGGCCAGCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559341.5
CDS GCA 90 bp CCAGCAGCTCTTGGGATGGGACCTGCACACACCAGAGGGTCCCCATaGAGACCCAGGAGGGGCTCACCACTTGGAGGAAGGGCGCCTCAG +
Preference number: 5 (lower is better)
Translates to: PAALGMGPAHTRGSP*RPRRGSPLGGRAPQ
Trigger: CTGAGGCGCCCTTCCTCCAAGTGGTGAGCCCCTCCTGGGTCTGCATGGGGACCCTCTGGTGTGTGCAGGTCCCATCCCAAGAGCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS GCA 90 bp GGCCTGCCTCCTGGGAGGACACGGAATAGCTTCCCCAAGGAGCCGTaGCCTGCTTCCCCATGCTGTCAGGCTGGAGCTGAGATGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GLPPGRTRNSFPKEP*PASPCCQAGAEMAQ
Trigger: CTGGGCCATCTCAGCTCCAGCCTGACAGCATGGGGAAGCAGGGCACGGCTCCTTGGGGAAGCTATTCCGTGTCCTCCCAGGAGGCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559374.1
CDS CCA 90 bp CCCCAATGTGCGCCGAGCTTCCGTCAGGAGGGTGAAATCAGACAGTaGGTACCGGCCAGCCAGACCAGAGCGGCGAGCGTGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PQCAPSFRQEGEIRQ*VPASQTRAASVSCS
Trigger: GCTGCAGCTCACGCTCGCCGCTCTGGTCTGGCTGGCCGGTACCCACTGTCTGATTTCACCCTCCTGACGGAAGCTCGGCGCACATTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS CCA 90 bp AGGAGCCGTGCCCTGCTTCCCCATGCTGTCAGGCTGGAGCTGAGATaGCCCAGGCCCCGGTCCACTGTGGGTCAGGTGGCAGAATGCTCA +
Preference number: 5 (lower is better)
Translates to: RSRALLPHAVRLELR*PRPRSTVGQVAECS
Trigger: TGAGCATTCTGCCACCTGACCCACAGTGGACCGGGGCCTGGGCCATCTCAGCTCCAGCCTGACAGCATGGGGAAGCAGGGCACGGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559374.1
CDS GCA 90 bp GGAGTCTGCTCCGCGGGCCCTGGGGCCGAGGAGCTTTGTCGCCTCTaGGTTGTGCCCTACTTAGCGCGATCTGATTCTGCTCGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: GVCSAGPGAEELCRL*VVPYLARSDSAREL
Trigger: AAGCTCCCGAGCAGAATCAGATCGCGCTAAGTAGGGCACAACGCAGAGGCGACAAAGCTCCTCGGCCCCAGGGCCCGCGGAGCAGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558290.5
ENST00000558853.5
ENST00000560534.2
CDS GCA 90 bp CACAGAATGAGTTTCTTTCTGCTCAGGAGGAAGGAGGACGCTAACTaGGGAGCCGAGCGTGGGCGGGACCGCGCTCCGGAGTCTGCTCCG +
Preference number: 5 (lower is better)
Translates to: HRMSFFLLRRKEDAN*GAERGRDRAPESAP
Trigger: CGGAGCAGACTCCGGAGCGCGGTCCCGCCCACGCTCGGCTCCGCAGTTAGCGTCCTCCTTCCTCCTGAGCAGAAAGAAACTCATTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560534.2
CDS CCA 90 bp CAGCAGCGCCTCTGCCCAGAGGCAGTGCTGGCACAGGGAGGCGTGTaGGTAAGGAAAGGCCAAAACCTGGTCCTGGAGGTTTGGAGCCGA +
Preference number: 5 (lower is better)
Translates to: QQRLCPEAVLAQGGV*VRKGQNLVLEVWSR
Trigger: TCGGCTCCAAACCTCCAGGACCAGGTTTTGGCCTTTCCTTACCCACACGCCTCCCTGTGCCAGCACTGCCTCTGGGCAGAGGCGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560880.1
CDS CCA 90 bp TCTAGGCCAATGTGGGTGGAGTTGAGTAAGCGCATGATCGGGCAGTaGTCGAAACGCCCGCCTCCGTCTCGGCAGACGCGTAGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: SRPMWVELSKRMIGQ*SKRPPPSRQTRSGV
Trigger: CACCCCGCTACGCGTCTGCCGAGACGGAGGCGGGCGTTTCGACCACTGCCCGATCATGCGCTTACTCAACTCCACCCACATTGGCCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558290.5
ENST00000558853.5
ENST00000560534.2
CDS CCA 90 bp CATACTGGCCTCCACACACACTTGAGTAAGCGCATGATCGGGCAGTaGTCGAAACGCCCGCCTCCGTCTCGGCAGACGCGTAGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: HTGLHTHLSKRMIGQ*SKRPPPSRQTRSGV
Trigger: CACCCCGCTACGCGTCTGCCGAGACGGAGGCGGGCGTTTCGACCACTGCCCGATCATGCGCTTACTCAAGTGTGTGTGGAGGCCAGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559999.5
CDS-3UTR CAA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCCCTCTCTGCCACGTaGGCCTCTGTGATGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVALSAT*ASVMAR
Trigger: CCGGGCCATCACAGAGGCCAACGTGGCAGAGAGGGC...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS GCA 90 bp AAGTGGGCGCAGGGCTTTCAGAGATCGGAGATGCAGCAGCGCCTCTaGCCAGAGGCAGTGCTGGCACAGGGAGGCGTGTGGGTAAGGAAA +
Preference number: 5 (lower is better)
Translates to: KWAQGFQRSEMQQRL*PEAVLAQGGVWVRK
Trigger: TTTCCTTACCCACACGCCTCCCTGTGCCAGCACTGCCTCTGGGCAGAGGCGCTGCTGCATCTCCGATCTCTGAAAGCCCTGCGCCCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560880.1
CDS CCA 90 bp CGCCGGGGCGTTCAGGTACATGGAGGTCAGGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCTATCTTGGACCATGGAGCACGGACC +
Preference number: 5 (lower is better)
Translates to: RRGVQVHGGQVAEEG*VAGRVAILDHGART
Trigger: GGTCCGTGCTCCATGGTCCAAGATAGCCACTCTACCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCATGTACCTGAACGCCCCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559558.1
CDS CCA 90 bp GGCCTCCACACACACCTGGTCCTGGTAGCAGCTCTGCCGCTAGGGTaGAGAGGACGCTCTCCTTTGGCTGGTGCTATGAAAAACGGGCCC +
Preference number: 5 (lower is better)
Translates to: GLHTHLVLVAALPLG*RGRSPLAGAMKNGP
Trigger: GGGCCCGTTTTTCATAGCACCAGCCAAAGGAGAGCGTCCTCTCCACCCTAGCGGCAGAGCTGCTACCAGGACCAGGTGTGTGTGGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559965.5
CDS CCA 90 bp AGGGAATGGCTCTGCCTCTCTGCACATGGCGTAGTCCAGGTTACCTaGGCGAGGAATCCAGCTGGATCACCGTGCGCTCTGGGAGGGCGT +
Preference number: 5 (lower is better)
Translates to: REWLCLSAHGVVQVT*ARNPAGSPCALGGR
Trigger: ACGCCCTCCCAGAGCGCACGGTGATCCAGCTGGATTCCTCGCCCAGGTAACCTGGACTACGCCATGTGCAGAGAGGCAGAGCCATTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560192.5
ENST00000560505.1
CDS CCA 90 bp AAGCAGATACCTCTCTGCCACGTTGGCCTCTGTGATGGCCCGGGGTaGCACCTTCCAAGGGCAGTTGATGCGCCCACCAGGCAGGCGTTT +
Preference number: 5 (lower is better)
Translates to: KQIPLCHVGLCDGPG*HLPRAVDAPTRQAF
Trigger: AAACGCCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGGTGCCACCCCGGGCCATCACAGAGGCCAACGTGGCAGAGAGGTATCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561046.1
CDS-3UTR CAA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCAGGCGGGCCCTCTGCGTaGGCTGTCAGCTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAGGPSA*AVSSST
Trigger: CGTGCTGGAGCTGACAGCCAACGCAGAGGGCCCGCC...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCGGCGGGCCCTCTGCGTaGGCTGTCAGCTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: TLTKGLLSLISLASALFTGGPSA*AVSSST
Trigger: CGTGCTGGAGCTGACAGCCAACGCAGAGGGCCCGCC...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAGCCCTCTCTGCCACGTaGGCCTCTGTGATGGCCCGG +
Preference number: 5 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPALSAT*ASVMAR
Trigger: CCGGGCCATCACAGAGGCCAACGTGGCAGAGAGGGC...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGCGAGTGTCATCCACTaGGAGGAAGGGCGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRASVIH*EEGRLR
Trigger: CCTGAGGCGCCCTTCCTCCAAGTGGATGACACTCGC...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GCCCTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCAGGTAGAGTGGCTATCTaGGACCTCACTGCCCACGGT +
Preference number: 5 (lower is better)
Translates to: ALGLGPGCHPASAAGPRSGRVAI*DLTAHG
Trigger: ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACC...TGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGGGCCAAGTGCCCAGTTaGCCAGGGGTCTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPGQVPS*PGVLLP
Trigger: AGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGCC...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS GCA 90 bp GGACCATGGAGCACGGACCTCCAATCCAGAGTGCTCTGGGTAATCTaGGGCTTCACGAGCGATGCCACATCCACAGTGCCAGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GPWSTDLQSRVLWVI*GFTSDATSTVPAWL
Trigger: GAGCCAGGCTGGCACTGTGGATGTGGCATCGCTCGTGAAGCCGCAGATTACCCAGAGCACTCTGGATTGGAGGTCCGTGCTCCATGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559558.1
CDS GCA 90 bp GGCGTAGTCCAGGTTACCTGGGCGAGGAATCCAGCTGGATCACCGTaGGCTCTGGGAGGGCGTCGTGACTTAAGCGAGTGTCATCCTGGA +
Preference number: 5 (lower is better)
Translates to: GVVQVTWARNPAGSP*ALGGRRDLSECHPG
Trigger: TCCAGGATGACACTCGCTTAAGTCACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGGATTCCTCGCCCAGGTAACCTGGACTACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS GCA 90 bp GTAGCCTTAGGTCTCTGTCGTTGCGCCCCTCGGGCAAAGGGGTGCTaGCTCCTGTCGGTACAGCGCATTCCTCGAGTCCCTTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: VALGLCRCAPRAKGC*LLSVQRIPRVPFLS
Trigger: GGAAAGGAAAGGGACTCGAGGAATGCGCTGTACCGACAGGAGGCAGCACCCCTTTGCCCGAGGGGCGCAACGACAGAGACCTAAGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558290.5
ENST00000558853.5
CDS GCA 90 bp CAGGTAGCCTTAGGTCTCTGTCGTTGCGCCCCTCGGGCAAAGGGGTaGTGCCTCCTGTCGGTACAGCGCATTCCTCGAGTCCCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: QVALGLCRCAPRAKG*CLLSVQRIPRVPFL
Trigger: AAGGAAAGGGACTCGAGGAATGCGCTGTACCGACAGGAGGCAGCACCCCTTTGCCCGAGGGGCGCAACGACAGAGACCTAAGGCTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558290.5
ENST00000558853.5
CDS GCA 90 bp TTGGACATTGATGTTGTCCCACCACTTGGCGAAGAAGGAGACCTCTaGCCAGAGGAAGCGCCGCCGGGGGTCCTCCTGCAGGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LDIDVVPPLGEEGDL*PEEAPPGVLLQVFS
Trigger: GCTGAAGACCTGCAGGAGGACCCCCGGCGGCGCTTCCTCTGGGCAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559132.3
CDS CCA 90 bp CGCCGGGGCGTTCAGGTACATGGAGGTCAGGTGGCTGAGGAGGGATaGGTAGCTGGTAGAGTGGCTATCTTGGACCTCTCGGTTACCGCT +
Preference number: 5 (lower is better)
Translates to: RRGVQVHGGQVAEEG*VAGRVAILDLSVTA
Trigger: AGCGGTAACCGAGAGGTCCAAGATAGCCACTCTACCAGCTACCCATCCCTCCTCAGCCACCTGACCTCCATGTACCTGAACGCCCCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557990.1
CDS-3UTR CAA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGGGCGGGCCCTCTGCGTaGGCTGTCAGCTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQGGPSA*AVSSST
Trigger: CGTGCTGGAGCTGACAGCCAACGCAGAGGGCCCGCC...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTGGAGATGTCGAAGCCTaGCCTCCACACACCACCATC +
Preference number: 5 (lower is better)
Translates to: LGLGPGCHPASAAGPRSPGDVEA*PPHTTI
Trigger: GATGGTGGTGTGTGGAGGCAAGGCTTCGACATCTCC...AGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp AGGGCCTGGGAGCTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGCTATTGAGGATGTGTaGGGTCTGCTCTGTGTAGTA +
Preference number: 5 (lower is better)
Translates to: RAWELHPGYRQSERRGVQAIEDV*GLLCVV
Trigger: TACTACACAGAGCAGACCCAACACATCCTCAATAGC...CTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp AGGGCCTGGGAGCTGCATCCTGGCTACAGGCAGAGCGAGCGCCGGGGCGTTCAGTTTTGGACATTGATGTaGTCCCACCACTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: RAWELHPGYRQSERRGVQFWTLM*SHHLAK
Trigger: CTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAA...CTGAACGCCCCGGCGCTCGCTCTGCCTGTAGCCAGGATGCAGCTCCCAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCAACCTTCCAAGGGCAGTaGATGCGCCCACCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SQREFRQGEGPHTPATIPTFQGQ*MRPPGR
Trigger: CCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGGT...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCAGCCCTCTCTGCCACGTaGGCCTCTGTGATGGCCCGG +
Preference number: 5 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAALSAT*ASVMAR
Trigger: CCGGGCCATCACAGAGGCCAACGTGGCAGAGAGGGC...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTACCACCACAGCCTCCTaGGCCGTGCCAGTGATGGCA +
Preference number: 5 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPITTTAS*AVPVMA
Trigger: TGCCATCACTGGCACGGCCAAGGAGGCTGTGGTGGT...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTGGCCTAGGCCCCGGTaGTCATCCTGCATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QAALTAKPSQKAARPSDSWPRPR*SSCISR
Trigger: GCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCA...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTTGAAGCCCAAGTTCTaGGCCTCCAGGCCGCAGTCA +
Preference number: 5 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPLKPKF*ASRPQS
Trigger: TGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAA...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCATGGGGCCGAGGAGCTTaGTCGCCTCTGCGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPWGRGA*SPLRCA
Trigger: GGCACAACGCAGAGGCGACAAAGCTCCTCGGCCCCA...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559717.6
CDS TCA 90 bp GGCGAGGAATCCAGCTGGATCACCGTGCGCTCTGGGAGGGCGTCGTaGCTTAAGCGAGTGTCATCCTGGAATTCAGTGAGCCGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: GEESSWITVRSGRAS*LKRVSSWNSVSRKG
Trigger: TCCCTTCCGGCTCACTGAATTCCAGGATGACACTCGCTTAAGTCACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGGATTCCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS GCA 90 bp TTGGACATTGATGTTGTCCCACCACTTGGCGAAGAAGGAGACCTCTaGCCAGAGGAAGCGCCGCCGGGGGTCCTCCTGCAGCTTAGACAC +
Preference number: 5 (lower is better)
Translates to: LDIDVVPPLGEEGDL*PEEAPPGVLLQLRH
Trigger: GTGTCTAAGCTGCAGGAGGACCCCCGGCGGCGCTTCCTCTGGGCAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS GCA 90 bp AGCAGCTCTGCCGCTAGGGTGGAGAGGACGCTCTCCTTTGGCTGGTaGTATGAAAAACGGGCCCAGGATAAGAGTCCCAGCTCCGACTGG +
Preference number: 5 (lower is better)
Translates to: SSSAARVERTLSFGW*YEKRAQDKSPSSDW
Trigger: CCAGTCGGAGCTGGGACTCTTATCCTGGGCCCGTTTTTCATAGCACCAGCCAAAGGAGAGCGTCCTCTCCACCCTAGCGGCAGAGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS GCA 90 bp GGCGTAGTCCAGGTTACCTGGGCGAGGAATCCAGCTGGATCACCGTaGGCTCTGGGAGGGCGTCGTGACTTAAGCGAGTGTCATCCACTT +
Preference number: 5 (lower is better)
Translates to: GVVQVTWARNPAGSP*ALGGRRDLSECHPL
Trigger: AAGTGGATGACACTCGCTTAAGTCACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGGATTCCTCGCCCAGGTAACCTGGACTACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560192.5
CDS CCA 90 bp GGTAGCAGCTCTGCCGCTAGGGTGGAGAGGACGCTCTCCTTTGGCTaGTGCTATGAAAAACGGGCCCAGGATAAGAGTCCCAGCTCCGAC +
Preference number: 5 (lower is better)
Translates to: GSSSAARVERTLSFG*CYEKRAQDKSPSSD
Trigger: GTCGGAGCTGGGACTCTTATCCTGGGCCCGTTTTTCATAGCACCAGCCAAAGGAGAGCGTCCTCTCCACCCTAGCGGCAGAGCTGCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS-3UTR CAA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATGCCCTCTCTGCCACGTaGGCCTCTGTGATGGCCCGG +
Preference number: 5 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHALSAT*ASVMAR
Trigger: CCGGGCCATCACAGAGGCCAACGTGGCAGAGAGGGC...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGCCCTCTCTGCCACGTaGGCCTCTGTGATGGCCCGG +
Preference number: 5 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRALSAT*ASVMAR
Trigger: CCGGGCCATCACAGAGGCCAACGTGGCAGAGAGGGC...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCGGCACCAGGAGGACGTaGCTTCGGAACAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: QAALTAKPSQKAARPSDSGTRRT*LRNSWD
Trigger: GTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCC...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCACCACCACAGCCTCCTaGGCCGTGCCAGTGATGGCA +
Preference number: 5 (lower is better)
Translates to: QAALTAKPSQKAARPSDSTTTAS*AVPVMA
Trigger: TGCCATCACTGGCACGGCCAAGGAGGCTGTGGTGGT...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGACGCACGCGGGGAGAGTaGACCAGCAGGGACACCATG +
Preference number: 5 (lower is better)
Translates to: ISLASALFTHHWVCGLRRRTRGE*TSRDTM
Trigger: CATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGCG...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTACCCTTCGGATGCTCTaGAGGAGCCCAGTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRTLRML*RSPVRP
Trigger: AGGCCTTACTGGGCTCCTCAAGAGCATCCGAAGGGT...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGGTTCTCTTGTTGTCCTaGAGCCCTTGGCCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: LPARRGAERLLKLPKHMEVLLLS*SPWPRP
Trigger: GGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAAC...CTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS TCA 90 bp CTGGGAGGGCGTCGTGACTTAAGCGAGTGTCATCCTGGAATTCAGTaGGCCGGAAGGGAAGAACCATCATGGGCTCAGCCTCCTCCCACC +
Preference number: 5 (lower is better)
Translates to: LGGRRDLSECHPGIQ*AGREEPSWAQPPPT
Trigger: GGTGGGAGGAGGCTGAGCCCATGATGGTTCTTCCCTTCCGGCTCACTGAATTCCAGGATGACACTCGCTTAAGTCACGACGCCCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS TCA 90 bp TTCCCCACCACCCTGGCCTTTTACCTTGAGGAGCCCAGTAAGGCCTaGGAACCAGACCTGCATGTAGCGGTTGCTGAGGGCGAAGTCGCT +
Preference number: 5 (lower is better)
Translates to: FPTTLAFYLEEPSKA*EPDLHVAVAEGEVA
Trigger: AGCGACTTCGCCCTCAGCAACCGCTACATGCAGGTCTGGTTCTCAGGCCTTACTGGGCTCCTCAAGGTAAAAGGCCAGGGTGGTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559374.1
CDS GCA 90 bp AAGAAGGAGACCTCTGCCCAGAGGAAGCGCCGCCGGGGGTCCTCCTaGAGCTTAGACACCATGCTATTGAGGATGTGTTGGGTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KKETSAQRKRRRGSS*SLDTMLLRMCWVCS
Trigger: AGAGCAGACCCAACACATCCTCAATAGCATGGTGTCTAAGCTGCAGGAGGACCCCCGGCGGCGCTTCCTCTGGGCAGAGGTCTCCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS GCA 90 bp CGGGCAGGAAGAGGTAGGCTCCACTCTTGTCTTTGGACGTACGGGTaGCATAGACAAGGACCTGCATGTCCACCTGCTGCTCGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: RAGRGRLHSCLWTYG*HRQGPACPPAARAP
Trigger: AGGAGCACGAGCAGCAGGTGGACATGCAGGTCCTTGTCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAGCCTACCTCTTCCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559374.1
ENST00000559717.6
ENST00000560451.5
ENST00000561047.1
CDS GCA 90 bp ACCATGCTGAATCGCTCCTGGGCGAGGAATCCAGCTGGATCACCGTaGGCTCTGGGAGGGCGTCGTGACTTAAGCGAGTGTCATCCACTT +
Preference number: 5 (lower is better)
Translates to: TMLNRSWARNPAGSP*ALGGRRDLSECHPL
Trigger: AAGTGGATGACACTCGCTTAAGTCACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGGATTCCTCGCCCAGGAGCGATTCAGCATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561240.1
CDS CCA 90 bp GGAGGCGTGTGGGTAAGGAAAGGCCAAAACCTGGTCCTGGAGGTTTaGAGCCGAATACCTGCTAAGGGGTCTGGACCTCATCCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: GGVWVRKGQNLVLEV*SRIPAKGSGPHPGG
Trigger: GCCTCCAGGATGAGGTCCAGACCCCTTAGCAGGTATTCGGCTCCAAACCTCCAGGACCAGGTTTTGGCCTTTCCTTACCCACACGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560880.1
CDS-3UTR CAA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTTCGGGTGGGATCGTGTaGCACTCGGTCCAGCATGAG +
Preference number: 5 (lower is better)
Translates to: PTLTKGLLSLISLASALFSGGIV*HSVQHE
Trigger: CTCATGCTGGACCGAGTGCAACACGATCCCACCCGA...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTAATTGGCAGCAGATCTaGGGATCTGGGCCACAGGTA +
Preference number: 5 (lower is better)
Translates to: LGLGPGCHPASAAGPRSPNWQQI*GSGPQV
Trigger: TACCTGTGGCCCAGATCCCAAGATCTGCTGCCAATT...AGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGCCACCAGGCAGGCGTTaGAAATCAAATTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPPPGRR*KSNWQQ
Trigger: CTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTGG...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCACCTTCCAAGGGCAGTaGATGCGCCCACCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSTFQGQ*MRPPGR
Trigger: CCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGGT...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACACCTTCCAAGGGCAGTaGATGCGCCCACCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYTFQGQ*MRPPGR
Trigger: CCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGGT...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTCCCACTCCTGGGGCTaGTCATATCGGAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPSHSWG*SYRKSS
Trigger: AGATGACTTCCGATATGACAAGCCCCAGGAGTGGGA...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTTCGCCGCTCTAGCAGGAGGATGACCTGCTTCAGGTaGACAAGGGAGCGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: VEWLSWTSLPTVRRSSRRMTCFR*TRERRS
Trigger: GCTTCTGCGCTCCCTTGTCAACCTGAAGCAGGTCAT...CCTCCTGCTAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCGCGAGTGTCATCCACTaGGAGGAAGGGCGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSASVIH*EEGRLR
Trigger: CCTGAGGCGCCCTTCCTCCAAGTGGATGACACTCGC...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATCGCACGCGGGGAGAGTaGACCAGCAGGGACACCATG +
Preference number: 5 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHRTRGE*TSRDTM
Trigger: CATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGCG...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTCCAGCGCACGCGGGGAGAGTaGACCAGCAGGGACACCATG +
Preference number: 5 (lower is better)
Translates to: NAFSSCPSTWSLGGFPFQRTRGE*TSRDTM
Trigger: CATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGCG...CTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGACCCTTCGGATGCTCTaGAGGAGCCCAGTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: VRLQGLPARRGAERLLKLTLRML*RSPVRP
Trigger: AGGCCTTACTGGGCTCCTCAAGAGCATCCGAAGGGT...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360468.7
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTCCAGCTGGCCATCTTaGAGGCTAGAGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPISSWPS*RLETPR
Trigger: CCTGGGTGTCTCTAGCCTCAAAGATGGCCAGCTGGA...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGTGGCCTAGGCCCCGGTaGTCATCCTGCATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQWPRPR*SSCISR
Trigger: GCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCA...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTCAGGGCTACCTTGCCTaGGCTTGTGGTGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRQGYLA*ACGAVE
Trigger: TTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCTG...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCACTGCCCAGGGCTACCTaGCCTTGGCTTGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAALPRAT*PWLVVQ
Trigger: CTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCAG...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCCACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGC +
Preference number: 5 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSHWVCG*RRKHSS
Trigger: GCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTG...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGCACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGC +
Preference number: 5 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVHWVCG*RRKHSS
Trigger: GCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTG...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTTCTTTAGGTGGCAGCTaGGCAGGCCCCAGTGACTTT +
Preference number: 5 (lower is better)
Translates to: GRAQCVTVLGGRSGWDTRSLGGS*AGPSDF
Trigger: AAAGTCACTGGGGCCTGCCAAGCTGCCACCTAAAGA...ACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS TCA 90 bp GCCCGTTTCCCACCAGCCTTCGGACTGCCGCTCTCTTTTGGACATTaGTGTTGTCCCACCACTTGGCGAAGAAGGAGACCTCTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: ARFPPAFGLPLSFGH*CCPTTWRRRRPLPR
Trigger: TCTGGGCAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTGGGAAACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS GCA 90 bp TCCGACTGGAGCGCACCACACAAGCTCCTGATTACACAGCTTCCCTaGCTAGATAGGAGGTGCCTGTTCAGGCTCCTCGGCCATGTGCTT +
Preference number: 5 (lower is better)
Translates to: SDWSAPHKLLITQLP*LDRRCLFRLLGHVL
Trigger: AAGCACATGGCCGAGGAGCCTGAACAGGCACCTCCTATCTAGGCAGGGAAGCTGTGTAATCAGGAGCTTGTGTGGTGCGCTCCAGTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS CCA 90 bp GGCTATCTTGGACCATGGAGCACGGACCTCCAATCCAGAGTGCTCTaGGTAATCTGCGGCTTCACGAGCGATGCCACATCCACAGTGCCA +
Preference number: 5 (lower is better)
Translates to: GYLGPWSTDLQSRVL*VICGFTSDATSTVP
Trigger: TGGCACTGTGGATGTGGCATCGCTCGTGAAGCCGCAGATTACCCAGAGCACTCTGGATTGGAGGTCCGTGCTCCATGGTCCAAGATAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559558.1
CDS CCA 90 bp CCCAGTGAGTTCCTGAGGGCTGTTCCAAAGGAACACCCATTTGCCTaGCTCCAAGTAGCACAAGCAGCACATCTGAGGCTGGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: PSEFLRAVPKEHPFA*LQVAQAAHLRLAHL
Trigger: CAGGTGGGCCAGCCTCAGATGTGCTGCTTGTGCTACTTGGAGCCAGGCAAATGGGTGTTCCTTTGGAACAGCCCTCAGGAACTCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560192.5
CDS-3UTR CAA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATGGCGGGCCCTCTGCGTaGGCTGTCAGCTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADGGPSA*AVSSST
Trigger: CGTGCTGGAGCTGACAGCCAACGCAGAGGGCCCGCC...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGGAGATGTCGAAGCCTaGCCTCCACACACCACCATC +
Preference number: 5 (lower is better)
Translates to: PTLTKGLLSLISLASALFGDVEA*PPHTTI
Trigger: GATGGTGGTGTGTGGAGGCAAGGCTTCGACATCTCC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTGACTGCCGCTCTCTTTaGGACATTGATGTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: LGLGPGCHPASAAGPRSPDCRSL*DIDVVP
Trigger: TGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTC...AGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACCTTCCAAGGGCAGTaGATGCGCCCACCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHTFQGQ*MRPPGR
Trigger: CCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGGT...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAGGACTTCTTCCGGTATaGGTCCAGAAGCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPGLLPV*VQKQGC
Trigger: GCAGCCCTGCTTCTGGACCAATACCGGAAGAAGTCC...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCCCACTCCTGGGGCTaGTCATATCGGAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: LPARRGAERLLKLPKHMESHSWG*SYRKSS
Trigger: AGATGACTTCCGATATGACAAGCCCCAGGAGTGGGA...CTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTTGGCCTAGGCCCCGGTTGTCATCCTGCATCAGCCGCCGGTCCAAGATCACCTGAAGTCAAAGAGCCGTaGGTAGTTGAAGAACTGGGC +
Preference number: 5 (lower is better)
Translates to: LGLGPGCHPASAAGPRSPEVKEP*VVEELG
Trigger: GCCCAGTTCTTCAACTACCAACGGCTCTTTGACTTC...AGGTGATCTTGGACCGGCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCACCACAGCCTCCTaGGCCGTGCCAGTGATGGCA +
Preference number: 5 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHTTTAS*AVPVMA
Trigger: TGCCATCACTGGCACGGCCAAGGAGGCTGTGGTGGT...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTATGACCTGCTTCAGGTaGACAAGGGAGCGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIMTCFR*TRERRS
Trigger: GCTTCTGCGCTCCCTTGTCAACCTGAAGCAGGTCAT...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGCGAGTGTCATCCACTaGGAGGAAGGGCGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRASVIH*EEGRLR
Trigger: CCTGAGGCGCCCTTCCTCCAAGTGGATGACACTCGC...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAACGCACGCGGGGAGAGTaGACCAGCAGGGACACCATG +
Preference number: 5 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQRTRGE*TSRDTM
Trigger: CATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGCG...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTCGCACGCGGGGAGAGTaGACCAGCAGGGACACCATG +
Preference number: 5 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSRTRGE*TSRDTM
Trigger: CATGGTGTCCCTGCTGGTCAACTCTCCCCGCGTGCG...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AGGCCACAAGAAGCCCTAACCCAAGCGGAGGCGAAAGGTAGCAATCTCCATGGGTCCAGCTGGCCATCTTaGAGGCTAGAGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: RPQEALTQAEAKGSNLHGSSWPS*RLETPR
Trigger: CCTGGGTGTCTCTAGCCTCAAAGATGGCCAGCTGGA...CCCATGGAGATTGCTACCTTTCGCCTCCGCTTGGGTTAGGGCTTCTTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTTGGCCTAGGCCCCGGTaGTCATCCTGCATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LLSLISLASALFTHHWVCWPRPR*SSCISR
Trigger: GCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCA...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCTGGCCTAGGCCCCGGTaGTCATCCTGCATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PAIIRKSPWGQQHTEHRSWPRPR*SSCISR
Trigger: GCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCA...GCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTGGCCTAGGCCCCGGTaGTCATCCTGCATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSWPRPR*SSCISR
Trigger: GCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAGTTCTCTTGTTGTCCTaGAGCCCTTGGCCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPVLLLS*SPWPRP
Trigger: GGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAAC...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCGGTTGCAGGTTCTCTaGTTGTCCTTGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: VRLQGLPARRGAERLLKLRLQVL*LSLSPW
Trigger: CCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCG...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCAGGGATGATATGTCCAGAGACAGCCCCTCCACCCCTGGCAGATTGTAAAGCCGGTAGAGTGGCTATCTaGGACCTCACTGCCCACGGT +
Preference number: 5 (lower is better)
Translates to: PGMICPETAPPPLADCKAGRVAI*DLTAHG
Trigger: ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACC...GGCTTTACAATCTGCCAGGGGTGGAGGGGCTGTCTCTGGACATATCATCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS-3UTR CAA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAGGTAGAGTGGCTATCTaGGACCTCACTGCCCACGGT +
Preference number: 5 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPGRVAI*DLTAHG
Trigger: ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACC...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GAGGAGGGATGGGTAGCTGGTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTTGGAGCGTACGTAGGTaGAGCAGGTGGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: EEGWVAGRVAILDLTAHGWSVRR*SRWKSQ
Trigger: CTGTGACTTCCACCTGCTCAACCTACGTACGCTCCA...ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACCAGCTACCCATCCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp AGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGCCGCAGTCAAAACCCTaGCGGTGTAAGATGAGTGCG +
Preference number: 5 (lower is better)
Translates to: RAQCVTVLGGRSGWDTRVPQSKP*RCKMSA
Trigger: CGCACTCATCTTACACCGCAAGGGTTTTGACTGCGG...CACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGCAGGAAGAGGTAGGCTCCACTCTTGTCTTTGGACGTACGGGTGCCATAGACTTGAAGCCCAAGTTCTaGGCCTCCAGGCCGCAGTCA +
Preference number: 5 (lower is better)
Translates to: GQEEVGSTLVFGRTGAIDLKPKF*ASRPQS
Trigger: TGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAA...GTCTATGGCACCCGTACGTCCAAAGACAAGAGTGGAGCCTACCTCTTCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS-3UTR CAA 90 bp CAATCTCCATGGGCTCCAAATAGACGTCAGTGCTGTTGGACGGGGAGGCCAGAGTTGAAGCCCAAGTTCTaGGCCTCCAGGCCGCAGTCA +
Preference number: 5 (lower is better)
Translates to: QSPWAPNRRQCCWTGRPELKPKF*ASRPQS
Trigger: TGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAA...CTCTGGCCTCCCCGTCCAACAGCACTGACGTCTATTTGGAGCCCATGGAGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp GAGGAGGGATGGGTAGCTGGTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTCAGGGCTACCTTGCCTaGGCTTGTGGTGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: EEGWVAGRVAILDLTAHGQGYLA*ACGAVE
Trigger: TTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCTG...ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACCAGCTACCCATCCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCCTGCCCAGGGCTACCTaGCCTTGGCTTGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTLPRAT*PWLVVQ
Trigger: CTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCAG...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACCTGCCCAGGGCTACCTaGCCTTGGCTTGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYLPRAT*PWLVVQ
Trigger: CTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCAG...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS CCA 90 bp AAGTCATCTCCAAGAGGCACCAGGAGGACGTTGCTTCGGAACAGCTaGGACTTCTTCCGGTATTGGTCCAGAAGCAGGGCTGCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: KSSPRGTRRTLLRNS*DFFRYWSRSRAALS
Trigger: AGAGAGGGCAGCCCTGCTTCTGGACCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCCTCTTGGAGATGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS-3UTR CAA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCTCGGGTGGGATCGTGTaGCACTCGGTCCAGCATGAG +
Preference number: 5 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTSGGIV*HSVQHE
Trigger: CTCATGCTGGACCGAGTGCAACACGATCCCACCCGA...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTTAGACACCATGCTATaGAGGATGTGTTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPLDTML*RMCWVC
Trigger: GCAGACCCAACACATCCTCAATAGCATGGTGTCTAA...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGTTAGACACCATGCTATaGAGGATGTGTTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLLDTML*RMCWVC
Trigger: GCAGACCCAACACATCCTCAATAGCATGGTGTCTAA...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATGTTGTCCCACCACTaGGCGAAGAAGGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: HRSQREFRQGEGPHTPATMLSHH*AKKETS
Trigger: AGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACAT...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGATGTTGTCCCACCACTaGGCGAAGAAGGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: VRLQGLPARRGAERLLKLMLSHH*AKKETS
Trigger: AGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACAT...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCCACCAGGCAGGCGTTaGAAATCAAATTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSPPGRR*KSNWQQ
Trigger: CTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTGG...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGAGGCACCAGGAGGACGTaGCTTCGGAACAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GQQHTEHRSQREFRQGEGGTRRT*LRNSWD
Trigger: GTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCC...TCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGGCACCAGGAGGACGTaGCTTCGGAACAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLGTRRT*LRNSWD
Trigger: GTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCC...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGGCACCAGGAGGACGTaGCTTCGGAACAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAGTRRT*LRNSWD
Trigger: GTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGAGGCACCAGGAGGACGTaGCTTCGGAACAGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PITGFVGCAENTAAAINRGTRRT*LRNSWD
Trigger: GTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCC...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCATGACCTGCTTCAGGTaGACAAGGGAGCGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SVSQFWEADRDGIPVWLVMTCFR*TRERRS
Trigger: GCTTCTGCGCTCCCTTGTCAACCTGAAGCAGGTCAT...GACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGCGAGTGTCATCCACTaGGAGGAAGGGCGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LLSLISLASALFTHHWVCASVIH*EEGRLR
Trigger: CCTGAGGCGCCCTTCCTCCAAGTGGATGACACTCGC...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACCCTTCGGATGCTCTaGAGGAGCCCAGTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: HWRLPYLPITGFVGCAENTLRML*RSPVRP
Trigger: AGGCCTTACTGGGCTCCTCAAGAGCATCCGAAGGGT...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTTGGCCTAGGCCCCGGTaGTCATCCTGCATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSWPRPR*SSCISR
Trigger: GCGGCTGATGCAGGATGACAACCGGGGCCTAGGCCA...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTTTGCAGGTTCTCTTGTaGTCCTTGAGCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSLQVLL*SLSPWP
Trigger: AGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAA...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGCGGTTGCAGGTTCTCTaGTTGTCCTTGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGRLQVL*LSLSPW
Trigger: CCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCG...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCCGGTTGCAGGTTCTCTaGTTGTCCTTGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: QAALTAKPSQKAARPSDSRLQVL*LSLSPW
Trigger: CCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCG...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGGTAGAGTGGCTATCTaGGACCTCACTGCCCACGGT +
Preference number: 5 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYGRVAI*DLTAHG
Trigger: ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGAAGCCCAAGTTCTaGGCCTCCAGGCCGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LSLISLASALFTHHWVCGLKPKF*ASRPQS
Trigger: TGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAA...CCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACTTGAAGCCCAAGTTCTaGGCCTCCAGGCCGCAGTCA +
Preference number: 5 (lower is better)
Translates to: HWRLPYLPITGFVGCAENLKPKF*ASRPQS
Trigger: TGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAA...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTACTGCCCAGGGCTACCTaGCCTTGGCTTGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLLPRAT*PWLVVQ
Trigger: CTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCAG...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACAT +
Preference number: 5 (lower is better)
Translates to: GQSPVCHSSGRQIGMGYPVTSRR*AEGIPH
Trigger: ATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTAC...CGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGACACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGC +
Preference number: 5 (lower is better)
Translates to: ISLASALFTHHWVCGLRRHWVCG*RRKHSS
Trigger: GCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTG...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGGCCAAGTGCCCAGTTaGCCAGGGGTCTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: GTYCKAITESSEAFRLLGGQVPS*PGVLLP
Trigger: AGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGCC...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTACACAGCCCTGACCCCTaGAGGAGCCCAGTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLHSPDP*RSPVRP
Trigger: AGGCCTTACTGGGCTCCTCAAGGGGTCAGGGCTGTG...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS TCA 90 bp CGAGGAGCTTTGTCGCCTCTGCGTTGTGCCCTACTTAGCGCGATCTaGTTCTGCTCGGGAGCTTCCGGGCAATATTTTCAGCCCTTAGAG +
Preference number: 5 (lower is better)
Translates to: RGALSPLRCALLSAI*FCSGASGQYFQPLE
Trigger: CTCTAAGGGCTGAAAATATTGCCCGGAAGCTCCCGAGCAGAATCAGATCGCGCTAAGTAGGGCACAACGCAGAGGCGACAAAGCTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558290.5
ENST00000558853.5
ENST00000560534.2
CDS TCA 90 bp AGTTCTACTCTGTGGGGTCTCCGAGACCCAGGCCCAGGAGTCACCTaGAAGCCATTGAGGTCTGTGAAGAAGATACCCTGGCTGTCGATG +
Preference number: 5 (lower is better)
Translates to: SSTLWGLRDPGPGVT*KPLRSVKKIPWLSM
Trigger: CATCGACAGCCAGGGTATCTTCTTCACAGACCTCAATGGCTTTCAGGTGACTCCTGGGCCTGGGTCTCGGAGACCCCACAGAGTAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561047.1
CDS GCA 90 bp GTTACCGCTCCTGCTGCTGTGAAAGATCAAGCCCCTAAACATGGCTaGCAGTTTGGAGAAAAAGTCAGGCTCACTGCCCACGGTTCGCCG +
Preference number: 5 (lower is better)
Translates to: VTAPAAVKDQAPKHG*QFGEKVRLTAHGSP
Trigger: CGGCGAACCGTGGGCAGTGAGCCTGACTTTTTCTCCAAACTGGCAGCCATGTTTAGGGGCTTGATCTTTCACAGCAGCAGGAGCGGTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557990.1
CDS CCA 90 bp TGGTGCTATGAAAAACGGGCCCAGGATAAGAGTCCCAGCTCCGACTaGAGCGCACCACACAAGCTCCTGATTACACAGCTTCCCTGCCTA +
Preference number: 5 (lower is better)
Translates to: WCYEKRAQDKSPSSD*SAPHKLLITQLPCL
Trigger: TAGGCAGGGAAGCTGTGTAATCAGGAGCTTGTGTGGTGCGCTCCAGTCGGAGCTGGGACTCTTATCCTGGGCCCGTTTTTCATAGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS CCA 90 bp AGATGGCAGCCCCACACACTGTCACCTGCTTTTTCAGCTTCATACTaGCCTCCACACACACCTGGCAGGAAGGACACCATCTGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: RWQPHTLSPAFSASY*PPHTPGRKDTICSS
Trigger: GGAGCTACAGATGGTGTCCTTCCTGCCAGGTGTGTGTGGAGGCCAGTATGAAGCTGAAAAAGCAGGTGACAGTGTGTGGGGCTGCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560192.5
CDS-3UTR CAA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTCGGGTGGGATCGTGTaGCACTCGGTCCAGCATGAG +
Preference number: 5 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSSGGIV*HSVQHE
Trigger: CTCATGCTGGACCGAGTGCAACACGATCCCACCCGA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTCTGCAGCACAGAAATTaGGCTCCGGGGGAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVLQHRN*APGEVP
Trigger: GGGAACTTCCCCCGGAGCCAAATTTCTGTGCTGCAG...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATATGTTGTCCCACCACTaGGCGAAGAAGGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: NEGRAQCVTVLGGRSGWDMLSHH*AKKETS
Trigger: AGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACAT...ATCCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTTGCAGGTTCTCTTGGCGTTTGAAATCAAATaGGCAGCAGATCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: LPTVRRSSRRRKRLQVLLAFEIK*AADLGI
Trigger: GATCCCAAGATCTGCTGCCAATTTGATTTCAAACGC...CAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATGGACTTCTTCCGGTATaGGTCCAGAAGCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHGLLPV*VQKQGC
Trigger: GCAGCCCTGCTTCTGGACCAATACCGGAAGAAGTCC...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACGGACTTCTTCCGGTATaGGTCCAGAAGCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYGLLPV*VQKQGC
Trigger: GCAGCCCTGCTTCTGGACCAATACCGGAAGAAGTCC...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GCCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTGAAGTCAAAGAGCCGTaGGTAGTTGAAGAACTGGGC +
Preference number: 5 (lower is better)
Translates to: AHSDQGPSLPDLTGVCPIEVKEP*VVEELG
Trigger: GCCCAGTTCTTCAACTACCAACGGCTCTTTGACTTC...AATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGACCACCACAGCCTCCTaGGCCGTGCCAGTGATGGCA +
Preference number: 5 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRTTTAS*AVPVMA
Trigger: TGCCATCACTGGCACGGCCAAGGAGGCTGTGGTGGT...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACACCACCACAGCCTCCTaGGCCGTGCCAGTGATGGCA +
Preference number: 5 (lower is better)
Translates to: LPITGFVGCAENTAAAINTTTAS*AVPVMA
Trigger: TGCCATCACTGGCACGGCCAAGGAGGCTGTGGTGGT...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAATGACCTGCTTCAGGTaGACAAGGGAGCGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: ISLASALFTHHWVCGLRRMTCFR*TRERRS
Trigger: GCTTCTGCGCTCCCTTGTCAACCTGAAGCAGGTCAT...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGACCCTTCGGATGCTCTaGAGGAGCCCAGTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SLISLASALFTHHWVCGLTLRML*RSPVRP
Trigger: AGGCCTTACTGGGCTCCTCAAGAGCATCCGAAGGGT...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACTCCAGCTGGCCATCTTaGAGGCTAGAGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHSSWPS*RLETPR
Trigger: CCTGGGTGTCTCTAGCCTCAAAGATGGCCAGCTGGA...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACTCCAGCTGGCCATCTTaGAGGCTAGAGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYSSWPS*RLETPR
Trigger: CCTGGGTGTCTCTAGCCTCAAAGATGGCCAGCTGGA...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTGTTCTCTTGTTGTCCTaGAGCCCTTGGCCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVVLLLS*SPWPRP
Trigger: GGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAAC...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCGGTTGCAGGTTCTCTaGTTGTCCTTGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: TLTKGLLSLISLASALFTRLQVL*LSLSPW
Trigger: CCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCG...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTACGGTTGCAGGTTCTCTaGTTGTCCTTGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GGTYCKAITESSEAFRLLRLQVL*LSLSPW
Trigger: CCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCG...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: GGTYCKAITESSEAFRLLRRRKR*QVLLLS
Trigger: GGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMRRRKR*QVLLLS
Trigger: GGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TLTKGLLSLISLASALFTRRRKR*QVLLLS
Trigger: GGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTATGGAGCGTACGTAGGTaGAGCAGGTGGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: GGTYCKAITESSEAFRLLWSVRR*SRWKSQ
Trigger: CTGTGACTTCCACCTGCTCAACCTACGTACGCTCCA...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCCCGCAGTCAAAACCCTaGCGGTGTAAGATGAGTGCG +
Preference number: 5 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFPQSKP*RCKMSA
Trigger: CGCACTCATCTTACACCGCAAGGGTTTTGACTGCGG...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCCGCAGTCAAAACCCTaGCGGTGTAAGATGAGTGCG +
Preference number: 5 (lower is better)
Translates to: TLTKGLLSLISLASALFTPQSKP*RCKMSA
Trigger: CGCACTCATCTTACACCGCAAGGGTTTTGACTGCGG...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTACCGCAGTCAAAACCCTaGCGGTGTAAGATGAGTGCG +
Preference number: 5 (lower is better)
Translates to: GGTYCKAITESSEAFRLLPQSKP*RCKMSA
Trigger: CGCACTCATCTTACACCGCAAGGGTTTTGACTGCGG...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCAGGGCTACCTTGCCTaGGCTTGTGGTGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYQGYLA*ACGAVE
Trigger: TTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCTG...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCCTGCCCAGGGCTACCTaGCCTTGGCTTGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCLPRAT*PWLVVQ
Trigger: CTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCAG...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp GTAGAGTGGCTATCTTGGACCTCACTGCCCACGGTTCGCCGCTCTAGCAGGAGGGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACAT +
Preference number: 5 (lower is better)
Translates to: VEWLSWTSLPTVRRSSRRVTSRR*AEGIPH
Trigger: ATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTAC...CCTCCTGCTAGAGCGGCGAACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGACACTGGGTTTGTGGGTaGCGCCGAAAACACAGCAGC +
Preference number: 5 (lower is better)
Translates to: GTYCKAITESSEAFRLLGHWVCG*RRKHSS
Trigger: GCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTG...TCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGTACCCATCACTGGGTTaGTGGGTTGCGCCGAAAACA +
Preference number: 5 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPYPSLG*WVAPKT
Trigger: TGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTA...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCAGGGATGATATGTCCAGAGACAGCCCCTCCACCCCTGGCAGATTGTAAAGCCTACCCATCACTGGGTTaGTGGGTTGCGCCGAAAACA +
Preference number: 5 (lower is better)
Translates to: PGMICPETAPPPLADCKAYPSLG*WVAPKT
Trigger: TGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTA...GGCTTTACAATCTGCCAGGGGTGGAGGGGCTGTCTCTGGACATATCATCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558161.5
CDS-3UTR CAA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTTGTTCCTCATCTGGCTaGTTGCAGGGGTTAGTAGTG +
Preference number: 5 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSCSSSG*LQGLVV
Trigger: CACTACTAACCCCTGCAACAAGCCAGATGAGGAACA...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS GCA 90 bp GTCAAAGTGGTAGGTCTCCTTGTCCCCCAGCACCAGATAGTGGGCTaGATGAATGATGACCTGCTTCAGGTTGACAAGGGAGCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: VKVVGLLVPQHQIVG*MNDDLLQVDKGAQK
Trigger: CTTCTGCGCTCCCTTGTCAACCTGAAGCAGGTCATCATTCATGCAGCCCACTATCTGGTGCTGGGGGACAAGGAGACCTACCACTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560505.1
ENST00000560616.5
ENST00000561240.1
CDS CCA 90 bp GATGAGCTGGTCAATCAATGCAAAGTAGTGGGAATTGGCCTCATCTaGCATCACCCAGCCTCCTGTCGCAATCTCCAGCTGCCCGTTTCC +
Preference number: 5 (lower is better)
Translates to: DELVNQCKVVGIGLI*HHPASCRNLQLPVS
Trigger: GGAAACGGGCAGCTGGAGATTGCGACAGGAGGCTGGGTGATGCCAGATGAGGCCAATTCCCACTACTTTGCATTGATTGACCAGCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000558640.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGTCGGGTGGGATCGTGTaGCACTCGGTCCAGCATGAG +
Preference number: 5 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRSGGIV*HSVQHE
Trigger: CTCATGCTGGACCGAGTGCAACACGATCCCACCCGA...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTTCCAGCACGGAGTCCTaGATATGGCTGATAATCTCA +
Preference number: 5 (lower is better)
Translates to: CLLGVVLNAFSSCPSTWSSSTES*IWLIIS
Trigger: TGAGATTATCAGCCATATCAAGGACTCCGTGCTGGA...ACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAATGTTGTCCCACCACTaGGCGAAGAAGGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: ISLASALFTHHWVCGLRRMLSHH*AKKETS
Trigger: AGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACAT...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGCCCAAGCTTTTGGACATTGATGTaGTCCCACCACTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: FKVCLLGVVLNAFSSCPSFWTLM*SHHLAK
Trigger: CTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAA...GCTTGGGCAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGACTGCCGCTCTCTTTaGGACATTGATGTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: PTLTKGLLSLISLASALFDCRSL*DIDVVP
Trigger: TGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTACCACCAGGCAGGCGTTaGAAATCAAATTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GGTYCKAITESSEAFRLLPPGRR*KSNWQQ
Trigger: CTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTGG...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCACCACCAGGCAGGCGTTaGAAATCAAATTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAAPPGRR*KSNWQQ
Trigger: CTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTGG...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGGACTTCTTCCGGTATaGGTCCAGAAGCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLGLLPV*VQKQGC
Trigger: GCAGCCCTGCTTCTGGACCAATACCGGAAGAAGTCC...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGATGACCTGCTTCAGGTaGACAAGGGAGCGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SLISLASALFTHHWVCGLMTCFR*TRERRS
Trigger: GCTTCTGCGCTCCCTTGTCAACCTGAAGCAGGTCAT...CAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATGCGAGTGTCATCCACTaGGAGGAAGGGCGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADASVIH*EEGRLR
Trigger: CCTGAGGCGCCCTTCCTCCAAGTGGATGACACTCGC...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCTCCAGCTGGCCATCTTaGAGGCTAGAGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: PAIIRKSPWGQQHTEHRSSSWPS*RLETPR
Trigger: CCTGGGTGTCTCTAGCCTCAAAGATGGCCAGCTGGA...GCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTCTCTTGTTGTCCTaGAGCCCTTGGCCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAVLLLS*SPWPRP
Trigger: GGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAAC...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp AGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SSGRQIGMGYPCGLSNDLRRRKR*QVLLLS
Trigger: GGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT...AAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTTGGAGCGTACGTAGGTaGAGCAGGTGGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVWSVRR*SRWKSQ
Trigger: CTGTGACTTCCACCTGCTCAACCTACGTACGCTCCA...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGTGGAGCGTACGTAGGTaGAGCAGGTGGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRWSVRR*SRWKSQ
Trigger: CTGTGACTTCCACCTGCTCAACCTACGTACGCTCCA...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATCCGCAGTCAAAACCCTaGCGGTGTAAGATGAGTGCG +
Preference number: 5 (lower is better)
Translates to: DQSPLPAIIRKSPWGQQHPQSKP*RCKMSA
Trigger: CGCACTCATCTTACACCGCAAGGGTTTTGACTGCGG...ATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTTGAAGCCCAAGTTCTaGGCCTCCAGGCCGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSLKPKF*ASRPQS
Trigger: TGACTGCGGCCTGGAGGCCAAGAACTTGGGCTTCAA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTCTGCCCAGGGCTACCTaGCCTTGGCTTGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: ITESSEAFRLLGETVIPSLPRAT*PWLVVQ
Trigger: CTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCAG...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTACCCATCACTGGGTTaGTGGGTTGCGCCGAAAACA +
Preference number: 5 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMYPSLG*WVAPKT
Trigger: TGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTA...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGTGTTCCTCATCTGGCTaGTTGCAGGGGTTAGTAGTG +
Preference number: 5 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGCSSSG*LQGLVV
Trigger: CACTACTAACCCCTGCAACAAGCCAGATGAGGAACA...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTGTTGCCACAGTGACCTCTTTAGGTGGCAGCTaGGCAGGCCCCAGTGACTTT +
Preference number: 5 (lower is better)
Translates to: ESLHNHRIPLEPAVATVTSLGGS*AGPSDF
Trigger: AAAGTCACTGGGGCCTGCCAAGCTGCCACCTAAAGA...GGTCACTGTGGCAACAGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS TCA 90 bp GGTACATGGAGGTCAGGTGGCTCTCGGTTACCGCTCCTGCTGCTGTaGAAGATCAAGCCCCTAAACATGGCTGCCAGTTTGGAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: GTWRSGGSRLPLLLL*KIKPLNMAASLEKK
Trigger: CTTTTTCTCCAAACTGGCAGCCATGTTTAGGGGCTTGATCTTTCACAGCAGCAGGAGCGGTAACCGAGAGCCACCTGACCTCCATGTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558374.5
CDS GCA 90 bp GCTTGTCATATCGGAAGTCATCTCCAAGAGGCACCAGGAGGACGTTaGTTCGGAACAGCTGGGACTTCTTCCGGTATTGGTCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: ACHIGSHLQEAPGGR*FGTAGTSSGIGPEA
Trigger: TGCTTCTGGACCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCCTCTTGGAGATGACTTCCGATATGACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS GCA 90 bp CCACACAAGCTCCTGATTACACAGCTTCCCTGCCTAGATAGGAGGTaGCTGTTCAGGCTCCTCGGCCATGTGCTTCTAGTTTCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: PHKLLITQLPCLDRR*LFRLLGHVLLVSGE
Trigger: TTCACCTGAAACTAGAAGCACATGGCCGAGGAGCCTGAACAGGCACCTCCTATCTAGGCAGGGAAGCTGTGTAATCAGGAGCTTGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559965.5
CDS GCA 90 bp CTCCACACACACCTGGCAGGAAGGACACCATCTGTAGCTCCAACATaGAAAATGCCCGTGGCAGTCTTTCCACCAAATACCCCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: LHTHLAGRTPSVAPT*KMPVAVFPPNTPVS
Trigger: ACTCACTGGGGTATTTGGTGGAAAGACTGCCACGGGCATTTTGCATGTTGGAGCTACAGATGGTGTCCTTCCTGCCAGGTGTGTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560192.5
CDS CCA 90 bp GCTGTCAGCTCCAGCACGGAGTCCTTGATATGGCTGATAATCTCATaGTTCTCCTCCAAAAGCTGCTCCAGCTGCTCAATGCGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AVSSSTESLIWLIIS*FSSKSCSSCSMRFC
Trigger: GCAGAACCGCATTGAGCAGCTGGAGCAGCTTTTGGAGGAGAACCATGAGATTATCAGCCATATCAAGGACTCCGTGCTGGAGCTGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000559999.5
ENST00000560192.5
ENST00000560451.5
CDS-3UTR CAA 90 bp AAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGTCCAGCACGGAGTCCTaGATATGGCTGATAATCTCA +
Preference number: 5 (lower is better)
Translates to: KMRAEPSVSQFWEADRDGSSTES*IWLIIS
Trigger: TGAGATTATCAGCCATATCAAGGACTCCGTGCTGGA...CCCATCCCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCATCCAGCACGGAGTCCTaGATATGGCTGATAATCTCA +
Preference number: 5 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPSSTES*IWLIIS
Trigger: TGAGATTATCAGCCATATCAAGGACTCCGTGCTGGA...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGGCTATTGAGGATGTGTaGGGTCTGCTCTGTGTAGTA +
Preference number: 5 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPAIEDV*GLLCVV
Trigger: TACTACACAGAGCAGACCCAACACATCCTCAATAGC...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCGACTGCCGCTCTCTTTaGGACATTGATGTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: TLTKGLLSLISLASALFTDCRSL*DIDVVP
Trigger: TGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTC...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGAATTGGCAGCAGATCTaGGGATCTGGGCCACAGGTA +
Preference number: 5 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRNWQQI*GSGPQV
Trigger: TACCTGTGGCCCAGATCCCAAGATCTGCTGCCAATT...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACAATTGGCAGCAGATCTaGGGATCTGGGCCACAGGTA +
Preference number: 5 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYNWQQI*GSGPQV
Trigger: TACCTGTGGCCCAGATCCCAAGATCTGCTGCCAATT...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGTCCCACTCCTGGGGCTaGTCATATCGGAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQSHSWG*SYRKSS
Trigger: AGATGACTTCCGATATGACAAGCCCCAGGAGTGGGA...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGAAGTCAAAGAGCCGTaGGTAGTTGAAGAACTGGGC +
Preference number: 5 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYEVKEP*VVEELG
Trigger: GCCCAGTTCTTCAACTACCAACGGCTCTTTGACTTC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACGAAGTCAAAGAGCCGTaGGTAGTTGAAGAACTGGGC +
Preference number: 5 (lower is better)
Translates to: HWRLPYLPITGFVGCAENEVKEP*VVEELG
Trigger: GCCCAGTTCTTCAACTACCAACGGCTCTTTGACTTC...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAGGTTAGGCCTGCTGTaGAAGAAGTCAAAGAGCCGT +
Preference number: 5 (lower is better)
Translates to: ISLASALFTHHWVCGLRRRLGLL*KKSKSR
Trigger: ACGGCTCTTTGACTTCTTCAACAGCAGGCCTAACCT...TCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGACCAATCCCCACTCCCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCAAGGTTAGGCCTGCTGTaGAAGAAGTCAAAGAGCCGT +
Preference number: 5 (lower is better)
Translates to: GPIPTPCHNKKEPLGTAARLGLL*KKSKSR
Trigger: ACGGCTCTTTGACTTCTTCAACAGCAGGCCTAACCT...TGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGGGAGTGGGGATTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GCTGAACGCCTTCTCAAGCTGCCCAAGCACATGGAGTCTTGGAGGCTTTCCTTTTTGCAGGTTCTCTTGTaGTCCTTGAGCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: AERLLKLPKHMESWRLSFLQVLL*SLSPWP
Trigger: AGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAA...AAAGGAAAGCCTCCAAGACTCCATGTGCTTGGGCAGCTTGAGAAGGCGTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTCGGTTGCAGGTTCTCTaGTTGTCCTTGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSRLQVL*LSLSPW
Trigger: CCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCG...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLRRRKR*QVLLLS
Trigger: GGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAGGTAGAGTGGCTATCTaGGACCTCACTGCCCACGGT +
Preference number: 5 (lower is better)
Translates to: TYCKAITESSEAFRLLGEGRVAI*DLTAHG
Trigger: ACCGTGGGCAGTGAGGTCCAAGATAGCCACTCTACC...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGATGGAGCGTACGTAGGTaGAGCAGGTGGAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: PITGFVGCAENTAAAINRWSVRR*SRWKSQ
Trigger: CTGTGACTTCCACCTGCTCAACCTACGTACGCTCCA...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTCTGCCCAGGGCTACCTaGCCTTGGCTTGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCLPRAT*PWLVVQ
Trigger: CTGCACCACAAGCCAAGGCAAGGTAGCCCTGGGCAG...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR CAA 90 bp AGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCATCCCACTTCTATATCCCTGTTaGGAAAAAGGATGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: SQREFRQGEGPHTPATIPLLYPC*EKGWVP
Trigger: AGGCACCCATCCTTTTTCCAAACAGGGATATAGAAG...TGGGATGGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGTTTGCCAGGGGTCTaGCTACCTGAAGTGACCTAT +
Preference number: 5 (lower is better)
Translates to: ASALFTHHWVCGLRRKHSSLPGV*LPEVTY
Trigger: ATAGGTCACTTCAGGTAGCAAGACCCCTGGCAAACT...GCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATGGCCAAGTGCCCAGTTaGCCAGGGGTCTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADGQVPS*PGVLLP
Trigger: AGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGCC...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTACAAGCACATGGAGTCTaGGAGGCTTTCCTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: GGTYCKAITESSEAFRLLQAHGV*EAFLSR
Trigger: TCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTG...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTTCAGCCCTCTCACTCTaGTCTTTAGGTGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVSALSL*SLGGSL
Trigger: CAAGCTGCCACCTAAAGACAAGAGTGAGAGGGCTGA...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS TCA 90 bp CAACATGCAAAATGCCCGTGGCAGTCTTTCCACCAAATACCCCAGTaGGTTCCTGAGGGCTGTTCCAAAGGAACACCCATTTGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: QHAKCPWQSFHQIPQ*VPEGCSKGTPICLA
Trigger: AGCCAGGCAAATGGGTGTTCCTTTGGAACAGCCCTCAGGAACTCACTGGGGTATTTGGTGGAAAGACTGCCACGGGCATTTTGCATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560192.5
CDS GCA 90 bp CATAAAGCAAGCCCTGTGTGTTCTCCCTGTTTCTCTACTGTTCACTaGAGTGGGAAACTTCCAGCCGCGGTTTGCAGAGCACTTAGGGGA +
Preference number: 5 (lower is better)
Translates to: HKASPVCSPCFSTVH*SGKLPAAVCRALRG
Trigger: TCCCCTAAGTGCTCTGCAAACCGCGGCTGGAAGTTTCCCACTGCAGTGAACAGTAGAGAAACAGGGAGAACACACAGGGCTTGCTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558290.5
CDS-3UTR CAA 90 bp AATAAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATGGAGATGTCGAAGCCTaGCCTCCACACACCACCATC +
Preference number: 5 (lower is better)
Translates to: NKQKMRAEPSVSQFWEADGDVEA*PPHTTI
Trigger: GATGGTGGTGTGTGGAGGCAAGGCTTCGACATCTCC...ATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCGCTATTGAGGATGTGTaGGGTCTGCTCTGTGTAGTA +
Preference number: 5 (lower is better)
Translates to: VLGGRSGWDTRVACPMIFAIEDV*GLLCVV
Trigger: TACTACACAGAGCAGACCCAACACATCCTCAATAGC...GAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCTTAGACACCATGCTATaGAGGATGTGTTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: TLTKGLLSLISLASALFTLDTML*RMCWVC
Trigger: GCAGACCCAACACATCCTCAATAGCATGGTGTCTAA...GGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTTTGGACATTGATGTaGTCCCACCACTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: LGGRSGWDTRVACPMIFMFWTLM*SHHLAK
Trigger: CTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAA...CATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACGCTCTCTTTTGGACATaGATGTTGTCCCACCACTTG +
Preference number: 5 (lower is better)
Translates to: HSDQGPSLPDLTGVCPIYALFWT*MLSHHL
Trigger: CAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGC...GTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTAATTGGCAGCAGATCTaGGGATCTGGGCCACAGGTA +
Preference number: 5 (lower is better)
Translates to: SHQDMESLHNHRIPLEPANWQQI*GSGPQV
Trigger: TACCTGTGGCCCAGATCCCAAGATCTGCTGCCAATT...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGGCGTTTGAAATCAAATaGGCAGCAGATCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: DLTGVCPIYPSLGLWVAPAFEIK*AADLGI
Trigger: GATCCCAAGATCTGCTGCCAATTTGATTTCAAACGC...CGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCCACTCTGACCAAGGGCCTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTGCGTTTGAAATCAAATaGGCAGCAGATCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: PTLTKGLLSLISLASALFAFEIK*AADLGI
Trigger: GATCCCAAGATCTGCTGCCAATTTGATTTCAAACGC...AAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAGGCCCTTGGTCAGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCGCGTTTGAAATCAAATaGGCAGCAGATCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: QAALTAKPSQKAARPSDSAFEIK*AADLGI
Trigger: GATCCCAAGATCTGCTGCCAATTTGATTTCAAACGC...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTTCCCACTCCTGGGGCTaGTCATATCGGAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: LLSLISLASALFTHHWVCSHSWG*SYRKSS
Trigger: AGATGACTTCCGATATGACAAGCCCCAGGAGTGGGA...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCTCCCACTCCTGGGGCTaGTCATATCGGAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: PAIIRKSPWGQQHTEHRSSHSWG*SYRKSS
Trigger: AGATGACTTCCGATATGACAAGCCCCAGGAGTGGGA...GCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGAGGTTAGGCCTGCTGTaGAAGAAGTCAAAGAGCCGT +
Preference number: 5 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQRLGLL*KKSKSR
Trigger: ACGGCTCTTTGACTTCTTCAACAGCAGGCCTAACCT...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTTCCAGCTGGCCATCTTaGAGGCTAGAGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: ITESSEAFRLLGETVIPSSSWPS*RLETPR
Trigger: CCTGGGTGTCTCTAGCCTCAAAGATGGCCAGCTGGA...AGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTTTGCAGGTTCTCTTGTaGTCCTTGAGCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SHQDMESLHNHRIPLEPALQVLL*SLSPWP
Trigger: AGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAA...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTTTGCAGGTTCTCTTGTaGTCCTTGAGCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSLQVLL*SLSPWP
Trigger: AGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAA...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TYCKAITESSEAFRLLGERRRKR*QVLLLS
Trigger: GGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCT...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTCAGGGCTACCTTGCCTaGGCTTGTGGTGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSQGYLA*ACGAVE
Trigger: TTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCTG...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACCAGGGCTACCTTGCCTaGGCTTGTGGTGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: LPITGFVGCAENTAAAINQGYLA*ACGAVE
Trigger: TTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCTG...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCCAGGGCTACCTTGCCTaGGCTTGTGGTGCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCQGYLA*ACGAVE
Trigger: TTCAACTGCACCACAAGCCAAGGCAAGGTAGCCCTG...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 5 (lower is better)
Translates to: HWRLPYLPITGFVGCAENGYPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGTATCC...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 5 (lower is better)
Translates to: GGTYCKAITESSEAFRLLGYPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGTATCC...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATACCCATCACTGGGTTaGTGGGTTGCGCCGAAAACA +
Preference number: 5 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQYPSLG*WVAPKT
Trigger: TGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTA...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGTTTGCCAGGGGTCTaGCTACCTGAAGTGACCTAT +
Preference number: 5 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVSLPGV*LPEVTY
Trigger: ATAGGTCACTTCAGGTAGCAAGACCCCTGGCAAACT...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGGCCAAGTGCCCAGTTaGCCAGGGGTCTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRGQVPS*PGVLLP
Trigger: AGGTAGCAAGACCCCTGGCAAACTGGGCACTTGGCC...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCCTCCCAGAGTCACTCTGATCCTGCTCATCACACCAGGACATGGAGTCTCTACCAAGCACATGGAGTCTaGGAGGCTTTCCTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SSQSHSDPAHHTRTWSLYQAHGV*EAFLSR
Trigger: TCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTG...GTAGAGACTCCATGTCCTGGTGTGATGAGCAGGATCAGAGTGACTCTGGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGATCAGCCCTCTCACTCTaGTCTTTAGGTGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PITGFVGCAENTAAAINRSALSL*SLGGSL
Trigger: CAAGCTGCCACCTAAAGACAAGAGTGAGAGGGCTGA...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp CAGGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCATATCCCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 5 (lower is better)
Translates to: QAALTAKPSQKAARPSDSISPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGGATAT...GGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561448.5
CDS TCA 90 bp GTAGAGTGGCTATCTTGGACCTCTCGGTTACCGCTCCTGCTGCTGTaGAAGATCAAGCCCCTAAACATGGCTGCCAGTTTGGAGAAAAAG +
Preference number: 5 (lower is better)
Translates to: VEWLSWTSRLPLLLL*KIKPLNMAASLEKK
Trigger: CTTTTTCTCCAAACTGGCAGCCATGTTTAGGGGCTTGATCTTTCACAGCAGCAGGAGCGGTAACCGAGAGGTCCAAGATAGCCACTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557990.1
CDS GCA 90 bp ATATGGCTGATAATCTCATGGTTCTCCTCCAAAAGCTGCTCCAGCTaGTCAATGCGGTTCTGCAGCACAGAAATTTGGCTCCGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: IWLIISWFSSKSCSS*SMRFCSTEIWLRGK
Trigger: CTTCCCCCGGAGCCAAATTTCTGTGCTGCAGAACCGCATTGAGCAGCTGGAGCAGCTTTTGGAGGAGAACCATGAGATTATCAGCCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000558290.5
ENST00000559717.6
ENST00000559965.5
ENST00000559999.5
ENST00000560192.5
ENST00000560451.5
CDS GCA 90 bp GCATTCCTCGAGTCCCTTTCCTTTCCGTGCCTGCTCTATGTTTCCTaGCAGCGAGTGAACAAGACACAGACTTTTCTTGGCTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: AFLESLSFPCLLYVS*QRVNKTQTFLGCFP
Trigger: AGGGAAACAGCCAAGAAAAGTCTGTGTCTTGTTCACTCGCTGGCAGGAAACATAGAGCAGGCACGGAAAGGAAAGGGACTCGAGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558290.5
CDS-3UTR CAA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGGAGATGTCGAAGCCTaGCCTCCACACACCACCATC +
Preference number: 5 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRGDVEA*PPHTTI
Trigger: GATGGTGGTGTGTGGAGGCAAGGCTTCGACATCTCC...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGTTAGACACCATGCTATaGAGGATGTGTTGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: VCPIYPSLGLWVAPKTQQLDTML*RMCWVC
Trigger: GCAGACCCAACACATCCTCAATAGCATGGTGTCTAA...CTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGCTCTCTTTTGGACATaGATGTTGTCCCACCACTTG +
Preference number: 5 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRALFWT*MLSHHL
Trigger: CAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGC...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAAGACTGCCGCTCTCTTTaGGACATTGATGTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQDCRSL*DIDVVP
Trigger: TGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTC...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCCACCAGGCAGGCGTTaGAAATCAAATTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QIGMGYPCGLSNDLHVKRPPGRR*KSNWQQ
Trigger: CTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTGG...CCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGAAGTCAAAGAGCCGTaGGTAGTTGAAGAACTGGGC +
Preference number: 5 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLEVKEP*VVEELG
Trigger: GCCCAGTTCTTCAACTACCAACGGCTCTTTGACTTC...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTAGGTTAGGCCTGCTGTaGAAGAAGTCAAAGAGCCGT +
Preference number: 5 (lower is better)
Translates to: SHQDMESLHNHRIPLEPARLGLL*KKSKSR
Trigger: ACGGCTCTTTGACTTCTTCAACAGCAGGCCTAACCT...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACTTGCAGGTTCTCTTGTaGTCCTTGAGCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LPITGFVGCAENTAAAINLQVLL*SLSPWP
Trigger: AGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAA...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 5 (lower is better)
Translates to: GRQIGMGYPCGLSNDLHVGYPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGTATCC...AACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AAACAGAAAATGAGGGCAGAGCCCAGTGTGTCACAGTTCTGGGAGGCAGATCGGGGATACCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 5 (lower is better)
Translates to: KQKMRAEPSVSQFWEADRGYPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGGTATCC...CCGATCTGCCTCCCAGAACTGTGACACACTGGGCTCTGCCCTCATTTTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCCTCATATACTCTACATGCCCCTAGTCCCCTGTGCCAGGAACTGAATACCTCTTACCCATCACTGGGTTaGTGGGTTGCGCCGAAAACA +
Preference number: 5 (lower is better)
Translates to: SSYTLHAPSPLCQELNTSYPSLG*WVAPKT
Trigger: TGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTA...AGAGGTATTCAGTTCCTGGCACAGGGGACTAGGGGCATGTAGAGTATATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGTTTGCCAGGGGTCTaGCTACCTGAAGTGACCTAT +
Preference number: 5 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLSLPGV*LPEVTY
Trigger: ATAGGTCACTTCAGGTAGCAAGACCCCTGGCAAACT...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TCACACCAGGACATGGAGTCTCTACATAACCACAGGATTCCCCTAGAGCCTGCTCAAGCACATGGAGTCTaGGAGGCTTTCCTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SHQDMESLHNHRIPLEPAQAHGV*EAFLSR
Trigger: TCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTG...AGCAGGCTCTAGGGGAATCCTGTGGTTATGTAGAGACTCCATGTCCTGGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCTGCCATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAGCACATGGAGTCTaGGAGGCTTTCCTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PAIIRKSPWGQQHTEHRSQAHGV*EAFLSR
Trigger: TCTGGAAAGGAAAGCCTCCAAGACTCCATGTGCTTG...GCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTATGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATGTTCCTCATCTGGCTaGTTGCAGGGGTTAGTAGTG +
Preference number: 5 (lower is better)
Translates to: PIYPSLGLWVAPKTQQQQCSSSG*LQGLVV
Trigger: CACTACTAACCCCTGCAACAAGCCAGATGAGGAACA...TTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTGAGGCTTCAAGGTCTGCCTGCTAGGCGTGGTGCTGAACGCCTTCTCAAGCTGGATTATAGCTCACATTaGTGGAGCTCTCGTATATAC +
Preference number: 5 (lower is better)
Translates to: VRLQGLPARRGAERLLKLDYSSH*WSSRIY
Trigger: GTATATACGAGAGCTCCACAAATGTGAGCTATAATC...CAGCTTGAGAAGGCGTTCAGCACCACGCCTAGCAGGCAGACCTTGAAGCCTCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp CACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACACCCCTGCCACCGATTATAGCTCACATTaGTGGAGCTCTCGTATATAC +
Preference number: 5 (lower is better)
Translates to: HRSQREFRQGEGPHTPATDYSSH*WSSRIY
Trigger: GTATATACGAGAGCTCCACAAATGTGAGCTATAATC...GGTGGCAGGGGTGTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTATCCAGCACGGAGTCCTaGATATGGCTGATAATCTCA +
Preference number: 5 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLSSTES*IWLIIS
Trigger: TGAGATTATCAGCCATATCAAGGACTCCGTGCTGGA...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACAGATTTTGGACATTGATGTaGTCCCACCACTTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: PITGFVGCAENTAAAINRFWTLM*SHHLAK
Trigger: CTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAA...TCTGTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGCTCTCTTTTGGACATaGATGTTGTCCCACCACTTG +
Preference number: 5 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSALFWT*MLSHHL
Trigger: CAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGC...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCAGGTTAGGCCTGCTGTaGAAGAAGTCAAAGAGCCGT +
Preference number: 5 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCRLGLL*KKSKSR
Trigger: ACGGCTCTTTGACTTCTTCAACAGCAGGCCTAACCT...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTTTGCAGGTTCTCTTGTaGTCCTTGAGCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: WDTRVACPMIFMLRGSLCLQVLL*SLSPWP
Trigger: AGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAA...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGGTATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCAATGATCTTCATGTTAGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACAT +
Preference number: 5 (lower is better)
Translates to: GGRSGWDTRVACPMIFMLVTSRR*AEGIPH
Trigger: ATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTAC...TAACATGAAGATCATTGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACAT +
Preference number: 5 (lower is better)
Translates to: LQSHHRKQRGLQTPRRNSVTSRR*AEGIPH
Trigger: ATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTAC...ACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp GAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCACTTCTATATCCCTGTTaGGAAAAAGGATGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: EPLGTAAYRAQKPKRIQALLYPC*EKGWVP
Trigger: AGGCACCCATCCTTTTTCCAAACAGGGATATAGAAG...TGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CAGCATACAGAGCACAGAAGCCAAAGAGAATTCAGGCAGGGTGAAGGACCCCACCTTCTATATCCCTGTTaGGAAAAAGGATGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: QHTEHRSQREFRQGEGPHLLYPC*EKGWVP
Trigger: AGGCACCCATCCTTTTTCCAAACAGGGATATAGAAG...GTGGGGTCCTTCACCCTGCCTGAATTCTCTTTGGCTTCTGTGCTCTGTATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp ACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAGCTATTGAGGATGTGTaGGGTCTGCTCTGTGTAGTA +
Preference number: 5 (lower is better)
Translates to: TYCKAITESSEAFRLLGEAIEDV*GLLCVV
Trigger: TACTACACAGAGCAGACCCAACACATCCTCAATAGC...TTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGCTCTCTTTTGGACATaGATGTTGTCCCACCACTTG +
Preference number: 5 (lower is better)
Translates to: LPITGFVGCAENTAAAINALFWT*MLSHHL
Trigger: CAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp CTTCTCTCCCTGATCTCACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGCGTTTGAAATCAAATaGGCAGCAGATCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: LLSLISLASALFTHHWVCAFEIK*AADLGI
Trigger: GATCCCAAGATCTGCTGCCAATTTGATTTCAAACGC...ACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTGAGATCAGGGAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACAT +
Preference number: 5 (lower is better)
Translates to: LPITGFVGCAENTAAAINVTSRR*AEGIPH
Trigger: ATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTAC...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp AGAAAGCAGCGAGGCCTTCAGACTCCTAGGAGAAACAGTGATTCCTTCTACTGCGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACAT +
Preference number: 5 (lower is better)
Translates to: RKQRGLQTPRRNSDSFYCVTSRR*AEGIPH
Trigger: ATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTAC...GCAGTAGAAGGAATCACTGTTTCTCCTAGGAGTCTGAAGGCCTCGCTGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
ENST00000561448.5
CDS-3UTR CAA 90 bp TGTGTCACAGTTCTGGGAGGCAGATCGGGATGGGATACCCGTGTGGCTTGTCCATTCCCCTCCTATTGTTaGATTACAAATTCTACTAGC +
Preference number: 5 (lower is better)
Translates to: CVTVLGGRSGWDTRVACPFPSYC*ITNSTS
Trigger: GCTAGTAGAATTTGTAATCAAACAATAGGAGGGGAA...TGGACAAGCCACACGGGTATCCCATCCCGATCTGCCTCCCAGAACTGTGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp TTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACACAGCAGCAGCAATAAACCTTCTATATCCCTGTTaGGAAAAAGGATGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: LPITGFVGCAENTAAAINLLYPC*EKGWVP
Trigger: AGGCACCCATCCTTTTTCCAAACAGGGATATAGAAG...GTTTATTGCTGCTGCTGTGTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560451.5
CDS-3UTR CAA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTTGTTCCTCATCTGGCTaGTTGCAGGGGTTAGTAGTG +
Preference number: 5 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCCSSSG*LQGLVV
Trigger: CACTACTAACCCCTGCAACAAGCCAGATGAGGAACA...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR CAA 90 bp CACTGGCGTCTGCCCTATTTACCCATCACTGGGTTTGTGGGTTGCGCCGAAAACCAGATTCCCCTCCTATaGTTTGATTACAAATTCTAC +
Preference number: 5 (lower is better)
Translates to: HWRLPYLPITGFVGCAENQIPLL*FDYKFY
Trigger: GTAGAATTTGTAATCAAACAATAGGAGGGGAATCTG...GTTTTCGGCGCAACCCACAAACCCAGTGATGGGTAAATAGGGCAGACGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp GGCGGCACTTACTGCAAAGCCATCACAGAAAGCAGCGAGGCCTTCAGACTCCTACAGATTCCCCTCCTATaGTTTGATTACAAATTCTAC +
Preference number: 5 (lower is better)
Translates to: GGTYCKAITESSEAFRLLQIPLL*FDYKFY
Trigger: GTAGAATTTGTAATCAAACAATAGGAGGGGAATCTG...TAGGAGTCTGAAGGCCTCGCTGCTTTCTGTGATGGCTTTGCAGTAAGTGCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCGGACTTCTTCCGGTATaGGTCCAGAAGCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSGLLPV*VQKQGC
Trigger: GCAGCCCTGCTTCTGGACCAATACCGGAAGAAGTCC...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCGTTCTCTTGTTGTCCTaGAGCCCTTGGCCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSVLLLS*SPWPRP
Trigger: GGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAAC...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTGTAACGTCAAGGAGGTaGGCTGAAGGAATACCACAT +
Preference number: 5 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCVTSRR*AEGIPH
Trigger: ATGTGGTATTCCTTCAGCCAACCTCCTTGACGTTAC...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR CAA 90 bp GTTGGTTTCCGTGTGGCTTGTCCAATGATCTTCATGTTAAGAGGCAGTCTCTGTTGGTTTCCGTGTGGCTaGTCCAATGATCTTCATGTT +
Preference number: 5 (lower is better)
Translates to: VGFRVACPMIFMLRGSLCWFPCG*SNDLHV
Trigger: AACATGAAGATCATTGGACAAGCCACACGGAAACCA...ACAGAGACTGCCTCTTAACATGAAGATCATTGGACAAGCCACACGGAAACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559704.1
CDS-3UTR CAA 90 bp AAAGATAATATCCTTTATTCTGCTCATTTTCTAGGCGTTCACAGATTCCCCTCCAGTTTGCCAGGGGTCTaGCTACCTGAAGTGACCTAT +
Preference number: 5 (lower is better)
Translates to: KDNILYSAHFLGVHRFPSSLPGV*LPEVTY
Trigger: ATAGGTCACTTCAGGTAGCAAGACCCCTGGCAAACT...GGAGGGGAATCTGTGAACGCCTAGAAAATGAGCAGAATAAAGGATATTATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp ACACATTCACTCTCCCAAATGCACTTTAGAACTGTCAATTCCAAAGTTTCAATCTGTTCCTCATCTGGCTaGTTGCAGGGGTTAGTAGTG +
Preference number: 5 (lower is better)
Translates to: THSLSQMHFRTVNSKVSICSSSG*LQGLVV
Trigger: CACTACTAACCCCTGCAACAAGCCAGATGAGGAACA...GATTGAAACTTTGGAATTGACAGTTCTAAAGTGCATTTGGGAGAGTGAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS-3UTR CAA 90 bp ATAATAAGAAAGAGCCCTTGGGGACAGCAGCATACAGAGCACAGAAGCCAAAGATTCCCCTCCTATTGTTaGATTACAAATTCTACTAGC +
Preference number: 5 (lower is better)
Translates to: IIRKSPWGQQHTEHRSQRFPSYC*ITNSTS
Trigger: GCTAGTAGAATTTGTAATCAAACAATAGGAGGGGAA...TCTTTGGCTTCTGTGCTCTGTATGCTGCTGTCCCCAAGGGCTCTTTCTTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360468.7
ENST00000559717.6
CDS CCA 72 bp GGCGGGACCGCGCTCCGGAGTCTGCTCCGCGGGCCCTaGGGCCGAGGAGCTTTGTCGCCTCTGCGTTGTGCC +
Preference number: 6 (lower is better)
Translates to: GGTALRSLLRGP*GRGALSPLRCA
Trigger: GGCACAACGCAGAGGCGACAAAGCTCCTCGGCCCCAGGGCCCGCGGAGCAGACTCCGGAGCGCGGTCCCGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558290.5
ENST00000558853.5
ENST00000559717.6
ENST00000560534.2
CDS GCA 72 bp TCCGCTTGCCTGCTCAGGAGGAAGGAGGACGCTAACTaGGGAGCCGAGCGTGGGCGGGACCGCGCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: SACLLRRKEDAN*GAERGRDRAPE
Trigger: CTCCGGAGCGCGGTCCCGCCCACGCTCGGCTCCGCAGTTAGCGTCCTCCTTCCTCCTGAGCAGGCAAGCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558290.5
CDS GCA 72 bp CCCAGGCCCCGGTCCACTGTGGGTCAGGTGGCAGAATaGTCACAGGGCCGGGAGGCCGCTCTGCACAGTGCC +
Preference number: 6 (lower is better)
Translates to: PRPRSTVGQVAE*SQGREAALHSA
Trigger: GGCACTGTGCAGAGCGGCCTCCCGGCCCTGTGAGCATTCTGCCACCTGACCCACAGTGGACCGGGGCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559374.1
CDS CAA 90 bp GCGGCCTCACCCGGCTCCGGCCCAGGTAGCCTTAGGTCTCTGTCGTaGCGCCCCTCGGGCAAAGGGGTGCTGCCTCCTGTCGGTACAGCG +
Preference number: 6 (lower is better)
Translates to: AASPGSGPGSLRSLS*RPSGKGVLPPVGTA
Trigger: CGCTGTACCGACAGGAGGCAGCACCCCTTTGCCCGAGGGGCGCAACGACAGAGACCTAAGGCTACCTGGGCCGGAGCCGGGTGAGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558290.5
ENST00000558853.5
CDS GCA 72 bp CCGGCTCCGGCCCAGGTAGCCTTAGGTCTCTGTCGTTaGGCCCCTCGGGCAAAGGGGTGCTGCCTCCTGTCG +
Preference number: 6 (lower is better)
Translates to: PAPAQVALGLCR*APRAKGCCLLS
Trigger: CGACAGGAGGCAGCACCCCTTTGCCCGAGGGGCGCAACGACAGAGACCTAAGGCTACCTGGGCCGGAGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558290.5
ENST00000558853.5
CDS GCA 72 bp CACACACACCTGCTCAGGAGGAAGGAGGACGCTAACTaGGGAGCCGAGCGTGGGCGGGACCGCGCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: HTHLLRRKEDAN*GAERGRDRAPE
Trigger: CTCCGGAGCGCGGTCCCGCCCACGCTCGGCTCCGCAGTTAGCGTCCTCCTTCCTCCTGAGCAGGTGTGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558853.5
ENST00000559717.6
CDS CAA 72 bp CCCGGCTCCGGCCCAGGTAGCCTTAGGTCTCTGTCGTaGCGCCCCTCGGGCAAAGGGGTGCTGCCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: PGSGPGSLRSLS*RPSGKGVLPPV
Trigger: GACAGGAGGCAGCACCCCTTTGCCCGAGGGGCGCAACGACAGAGACCTAAGGCTACCTGGGCCGGAGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558290.5
ENST00000558853.5
CDS TCA 72 bp AGTGGGTACCGGCCAGCCAGACCAGAGCGGCGAGCGTaGGCTGCAGCCAGGCTGTACAGAACCTCTGCCCCC +
Preference number: 6 (lower is better)
Translates to: SGYRPARPERRA*AAARLYRTSAP
Trigger: GGGGGCAGAGGTTCTGTACAGCCTGGCTGCAGCTCACGCTCGCCGCTCTGGTCTGGCTGGCCGGTACCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS TCA 72 bp GAGCTCCAGTGTGCGCTGATCTGCACGGCCAGGGGCTaGCCCTCCTCCGAAAGGACACGCACGCGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: ELQCALICTARG*PSSERTRTRGE
Trigger: CTCTCCCCGCGTGCGTGTCCTTTCGGAGGAGGGTCAGCCCCTGGCCGTGCAGATCAGCGCACACTGGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559374.1
ENST00000559717.6
ENST00000560451.5
ENST00000560616.5
ENST00000561240.1
CDS GCA 72 bp CCAGGAGGCTGCTGCTTCCGACCAGGGCAAGCGCCCTaGACTGGTTCAGCACATGCTGGGGCAGAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: PGGCCFRPGQAP*TGSAHAGAEGP
Trigger: AGGCCCCTCTGCCCCAGCATGTGCTGAACCAGTGCAGGGCGCTTGCCCTGGTCGGAAGCAGCAGCCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560192.5
ENST00000560505.1
CDS CCA 72 bp GCAAGGCCAGCAGATCAAGGGCACCCGGGCACCATGTaGGCCCAAGCGGTCCCCAGACTGAAGGAGTCCCCG +
Preference number: 6 (lower is better)
Translates to: ARPADQGHPGTM*AQAVPRLKESP
Trigger: CGGGGACTCCTTCAGTCTGGGGACCGCTTGGGCCCACATGGTGCCCGGGTGCCCTTGATCTGCTGGCCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561047.1
CDS CCA 72 bp GCCCTGCTTCCCCATGCTGTCAGGCTGGAGCTGAGATaGCCCAGGCCCCGGTCCACTGTGGGTCAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: ALLPHAVRLELR*PRPRSTVGQVA
Trigger: TGCCACCTGACCCACAGTGGACCGGGGCCTGGGCCATCTCAGCTCCAGCCTGACAGCATGGGGAAGCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559374.1
CDS CAA 72 bp CGGAGTCTGCTCCGCGGGCCCTGGGGCCGAGGAGCTTaGTCGCCTCTGCGTTGTGCCCTACTTAGCGCGATC +
Preference number: 6 (lower is better)
Translates to: RSLLRGPWGRGA*SPLRCALLSAI
Trigger: GATCGCGCTAAGTAGGGCACAACGCAGAGGCGACAAAGCTCCTCGGCCCCAGGGCCCGCGGAGCAGACTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558290.5
ENST00000558853.5
ENST00000559717.6
ENST00000560534.2
CDS GCA 72 bp GCGGCACCCCCATCCAGCAGCTCTTGGGATGGGACCTaGACACACCAGAGGGTCCCCATGCAGACCCAGGAG +
Preference number: 6 (lower is better)
Translates to: AAPPSSSSWDGT*THQRVPMQTQE
Trigger: CTCCTGGGTCTGCATGGGGACCCTCTGGTGTGTGCAGGTCCCATCCCAAGAGCTGCTGGATGGGGGTGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS GCA 72 bp AGGTGGCAGAATGCTCACAGGGCCGGGAGGCCGCTCTaGACAGTGCCACCACCACACACGCCCTACTCTGGC +
Preference number: 6 (lower is better)
Translates to: RWQNAHRAGRPL*TVPPPHTPYSG
Trigger: GCCAGAGTAGGGCGTGTGTGGTGGTGGCACTGTGCAGAGCGGCCTCCCGGCCCTGTGAGCATTCTGCCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559374.1
CDS CCA 72 bp CGGGGAGATGGAGAAGAAGCTGGGCCGGGGCTCCGGTaGCACCACCCAGGAGCCATTGACCGTGTAGTAGGG +
Preference number: 6 (lower is better)
Translates to: RGDGEEAGPGLR*HHPGAIDRVVG
Trigger: CCCTACTACACGGTCAATGGCTCCTGGGTGGTGCCACCGGAGCCCCGGCCCAGCTTCTTCTCCATCTCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000559999.5
ENST00000560192.5
ENST00000560451.5
CDS CCA 72 bp CCTCTCTGCCACGTTGGCCTCTGTGATGGCCCGGGGTaGCACCTTCCAAGGGCAGTTGATGCGCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: PLCHVGLCDGPG*HLPRAVDAPTR
Trigger: CCTGGTGGGCGCATCAACTGCCCTTGGAAGGTGCCACCCCGGGCCATCACAGAGGCCAACGTGGCAGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
ENST00000561046.1
CDS CCA 72 bp GCGCCGAGCTTCCGTCAGGAGGGTGAAATCAGACAGTaGGTACCGGCCAGCCAGACCAGAGCGGCGAGCGTG +
Preference number: 6 (lower is better)
Translates to: APSFRQEGEIRQ*VPASQTRAASV
Trigger: CACGCTCGCCGCTCTGGTCTGGCTGGCCGGTACCCACTGTCTGATTTCACCCTCCTGACGGAAGCTCGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS GCA 72 bp GATGTTGTCCCACCACTTGGCGAAGAAGGAGACCTCTaGCCAGAGGAAGCGCCGCCGGGGGTCCTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: DVVPPLGEEGDL*PEEAPPGVLLQ
Trigger: CTGCAGGAGGACCCCCGGCGGCGCTTCCTCTGGGCAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS GCA 72 bp CAGGGAAGTGGGCGCAGGGCTTTCAGAGATCGGAGATaGAGCAGCGCCTCTGCCCAGAGGCAGTGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: QGSGRRAFRDRR*SSASAQRQCWH
Trigger: GTGCCAGCACTGCCTCTGGGCAGAGGCGCTGCTGCATCTCCGATCTCTGAAAGCCCTGCGCCCACTTCCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560880.1
CDS GCA 72 bp CTCCCACCCCACCTGTCCCAGGTGTGGACCAGCGGCTaGACTGGGCACAGAACTCATCCGGATGGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: LPPHLSQVWTSG*TGHRTHPDGEG
Trigger: TCCTTCCCCATCCGGATGAGTTCTGTGCCCAGTGCAGCCGCTGGTCCACACCTGGGACAGGTGGGGTGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS GCA 72 bp GGTCTCTGTCGTTGCGCCCCTCGGGCAAAGGGGTGCTaGCTCCTGTCGGTACAGCGCATTCCTCGAGTCCCT +
Preference number: 6 (lower is better)
Translates to: GLCRCAPRAKGC*LLSVQRIPRVP
Trigger: AGGGACTCGAGGAATGCGCTGTACCGACAGGAGGCAGCACCCCTTTGCCCGAGGGGCGCAACGACAGAGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558290.5
ENST00000558853.5
CDS GCA 72 bp AGTTTCTTTCTGCTCAGGAGGAAGGAGGACGCTAACTaGGGAGCCGAGCGTGGGCGGGACCGCGCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: SFFLLRRKEDAN*GAERGRDRAPE
Trigger: CTCCGGAGCGCGGTCCCGCCCACGCTCGGCTCCGCAGTTAGCGTCCTCCTTCCTCCTGAGCAGAAAGAAACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560534.2
CDS CCA 72 bp TGTGCTGGAGTCCGAGTCTGCAGGAGACACACCACGTaGTCACCACCAGCAGGCAGCCTCTGGACGCCAGGG +
Preference number: 6 (lower is better)
Translates to: CAGVRVCRRHTT*SPPAGSLWTPG
Trigger: CCCTGGCGTCCAGAGGCTGCCTGCTGGTGGTGACCACGTGGTGTGTCTCCTGCAGACTCGGACTCCAGCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558640.5
CDS CCA 72 bp TCCTGCATCAGCCGCCGGTCCAAGATCACCTCCAGCTaGCCTGGGGAAGCAAACAGTGAGTGCTGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: SCISRRSKITSS*PGEANSECWPA
Trigger: GGCGGGCCAGCACTCACTGTTTGCTTCCCCAGGCCAGCTGGAGGTGATCTTGGACCGGCGGCTGATGCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559341.5
CDS CCA 72 bp CTACAGGCAGAGCGAGCGCCGGGGCGTTCAGGTACATaGAGGTCAGGTGGCTCTCGGTTACCGCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: LQAERAPGRSGT*RSGGSRLPLLL
Trigger: CAGCAGGAGCGGTAACCGAGAGCCACCTGACCTCCATGTACCTGAACGCCCCGGCGCTCGCTCTGCCTGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558374.5
CDS CAA 90 bp GGCTCACTGCCCACGGTTCGCCGCTCTAGCAGGAGGCGGAAACGGTaGCAGGTTCTCTTGTTGTCCTTGAGCCCTTGGCCTAGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: GSLPTVRRSSRRRKR*QVLLLSLSPWPRPR
Trigger: CCGGGGCCTAGGCCAAGGGCTCAAGGACAACAAGAGAACCTGCAACCGTTTCCGCCTCCTGCTAGAGCGGCGAACCGTGGGCAGTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557990.1
CDS GCA 72 bp TCTGGCATCACCCAGCCTCCTGTCGCAATCTCCAGCTaGCCGTTTCCCACCAGCCTTCGGACTGCCGCTCTC +
Preference number: 6 (lower is better)
Translates to: SGITQPPVAISS*PFPTSLRTAAL
Trigger: GAGAGCGGCAGTCCGAAGGCTGGTGGGAAACGGGCAGCTGGAGATTGCGACAGGAGGCTGGGTGATGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000558640.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS GCA 72 bp AAACCTGTGCGTAGAAGGTGGGCTGACCCAGGAGGCTaGTGCTTCCGACCAGGGCAAGCGCCCTGCACTGGT +
Preference number: 6 (lower is better)
Translates to: KPVRRRWADPGG*CFRPGQAPCTG
Trigger: ACCAGTGCAGGGCGCTTGCCCTGGTCGGAAGCAGCAGCCTCCTGGGTCAGCCCACCTTCTACGCACAGGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560192.5
ENST00000560505.1
CDS GCA 72 bp CTTGGGATGGGACCTGCACACACCAGAGGGTCCCCATaGAGACCCAGGAGGGGCTCACCACTTGGAGGAAGG +
Preference number: 6 (lower is better)
Translates to: LGMGPAHTRGSP*RPRRGSPLGGR
Trigger: CCTTCCTCCAAGTGGTGAGCCCCTCCTGGGTCTGCATGGGGACCCTCTGGTGTGTGCAGGTCCCATCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS GCA 72 bp TCCGCGGGCCCTGGGGCCGAGGAGCTTTGTCGCCTCTaGGTTGTGCCCTACTTAGCGCGATCTGATTCTGCT +
Preference number: 6 (lower is better)
Translates to: SAGPGAEELCRL*VVPYLARSDSA
Trigger: AGCAGAATCAGATCGCGCTAAGTAGGGCACAACGCAGAGGCGACAAAGCTCCTCGGCCCCAGGGCCCGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558290.5
ENST00000558853.5
ENST00000560534.2
CDS GCA 72 bp CCTGGGAGGACACGGAATAGCTTCCCCAAGGAGCCGTaGCCTGCTTCCCCATGCTGTCAGGCTGGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: PGRTRNSFPKEP*PASPCCQAGAE
Trigger: CTCAGCTCCAGCCTGACAGCATGGGGAAGCAGGGCACGGCTCCTTGGGGAAGCTATTCCGTGTCCTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559374.1
CDS CAA 72 bp GAGGGTCCCCATGCAGACCCAGGAGGGGCTCACCACTaGGAGGAAGGGCGCCTCAGGGTCAAAGTGGTAGGT +
Preference number: 6 (lower is better)
Translates to: EGPHADPGGAHH*EEGRLRVKVVG
Trigger: ACCTACCACTTTGACCCTGAGGCGCCCTTCCTCCAAGTGGTGAGCCCCTCCTGGGTCTGCATGGGGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS CAA 90 bp CACACACCAGAGGGTCCCCATGCAGACCCAGGAGGGGCTCACCACTaGGAGGAAGGGCGCCTCAGGGTCAAAGTGGTAGGTCTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: HTPEGPHADPGGAHH*EEGRLRVKVVGLLV
Trigger: GACAAGGAGACCTACCACTTTGACCCTGAGGCGCCCTTCCTCCAAGTGGTGAGCCCCTCCTGGGTCTGCATGGGGACCCTCTGGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS TCA 72 bp AGAGCCCCAATGTGCGCCGAGCTTCCGTCAGGAGGGTaGAATCAGACAGTGGGTACCGGCCAGCCAGACCAG +
Preference number: 6 (lower is better)
Translates to: RAPMCAELPSGG*NQTVGTGQPDQ
Trigger: CTGGTCTGGCTGGCCGGTACCCACTGTCTGATTTCACCCTCCTGACGGAAGCTCGGCGCACATTGGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS GCA 72 bp CAGAGTGCTCTGGGTAATCTGCGGCTTCACGAGCGATaGCACATCCACAGTGCCAGCCTGGCTCTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: QSALGNLRLHER*HIHSASLALRP
Trigger: GGGCCTGAGAGCCAGGCTGGCACTGTGGATGTGGCATCGCTCGTGAAGCCGCAGATTACCCAGAGCACTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559558.1
CDS GCA 72 bp TTAGGTCTCTGTCGTTGCGCCCCTCGGGCAAAGGGGTaGTGCCTCCTGTCGGTACAGCGCATTCCTCGAGTC +
Preference number: 6 (lower is better)
Translates to: LGLCRCAPRAKG*CLLSVQRIPRV
Trigger: GACTCGAGGAATGCGCTGTACCGACAGGAGGCAGCACCCCTTTGCCCGAGGGGCGCAACGACAGAGACCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558290.5
ENST00000558853.5
CDS CCA 72 bp CCCCACACACTGTCACCTGCTTTTTCAGCTTCATACTaGCCTCCACACACACCGTCAGCGCCCGGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: PHTLSPAFSASY*PPHTPSAPGLR
Trigger: GCGGAGGCCGGGCGCTGACGGTGTGTGTGGAGGCCAGTATGAAGCTGAAAAAGCAGGTGACAGTGTGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558161.5
ENST00000560451.5
CDS CCA 72 bp ATGTGGGTGGAGTTGAGTAAGCGCATGATCGGGCAGTaGTCGAAACGCCCGCCTCCGTCTCGGCAGACGCGT +
Preference number: 6 (lower is better)
Translates to: MWVELSKRMIGQ*SKRPPPSRQTR
Trigger: ACGCGTCTGCCGAGACGGAGGCGGGCGTTTCGACCACTGCCCGATCATGCGCTTACTCAACTCCACCCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000558290.5
ENST00000558853.5
ENST00000560534.2
CDS CCA 72 bp CTCCACACACACTTGAGTAAGCGCATGATCGGGCAGTaGTCGAAACGCCCGCCTCCGTCTCGGCAGACGCGT +
Preference number: 6 (lower is better)
Translates to: LHTHLSKRMIGQ*SKRPPPSRQTR
Trigger: ACGCGTCTGCCGAGACGGAGGCGGGCGTTTCGACCACTGCCCGATCATGCGCTTACTCAAGTGTGTGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559999.5
CDS CAA 90 bp CTTCGGACTGCCGCTCTCTTTTGGACATTGATGTTGTCCCACCACTaGGCGAAGAAGGAGACCTCTGCCCAGAGGAAGCGCCGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: LRTAALFWTLMLSHH*AKKETSAQRKRRRG
Trigger: CCCCCGGCGGCGCTTCCTCTGGGCAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTCCGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS TCA 72 bp TCCAGCTGGATCACCGTGCGCTCTGGGAGGGCGTCGTaGCTTAAGCGAGTGTCATCCACTTGGAGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: SSWITVRSGRAS*LKRVSSTWRKG
Trigger: GCCCTTCCTCCAAGTGGATGACACTCGCTTAAGTCACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
ENST00000561240.1
CDS TCA 72 bp GAGGAAGTGGGGGCACGGCTTTCGCCACAGGGGTGCTaGGGCATCCGCTTACTAACAGAGGGCTTGAGCAAG +
Preference number: 6 (lower is better)
Translates to: EEVGARLSPQGC*GIRLLTEGLSK
Trigger: CTTGCTCAAGCCCTCTGTTAGTAAGCGGATGCCTCAGCACCCCTGTGGCGAAAGCCGTGCCCCCACTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561047.1
CDS GCA 72 bp ACCTCTGCCCAGAGGAAGCGCCGCCGGGGGTCCTCCTaGAGCTTAGACACCATGCTATTGAGGATGTGTTGG +
Preference number: 6 (lower is better)
Translates to: TSAQRKRRRGSS*SLDTMLLRMCW
Trigger: CCAACACATCCTCAATAGCATGGTGTCTAAGCTGCAGGAGGACCCCCGGCGGCGCTTCCTCTGGGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS CAA 90 bp CACCAGGAGGACGTTGCTTCGGAACAGCTGGGACTTCTTCCGGTATaGGTCCAGAAGCAGGGCTGCCCTCTCTGCCACGTTGGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: HQEDVASEQLGLLPV*VQKQGCPLCHVGLC
Trigger: ACAGAGGCCAACGTGGCAGAGAGGGCAGCCCTGCTTCTGGACCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS TCA 72 bp CATAGTCCACCACCACAGCCTCCTTGGCCGTGCCAGTaGTGGCATCGTGATGCTGGAAGAGCCCCAATGTGC +
Preference number: 6 (lower is better)
Translates to: HSPPPQPPWPCQ*WHRDAGRAPMC
Trigger: GCACATTGGGGCTCTTCCAGCATCACGATGCCATCACTGGCACGGCCAAGGAGGCTGTGGTGGTGGACTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS TCA 72 bp CACCCTTCGGATGCTCTTGAGGAGCCCAGTAAGGCCTaGGAACCAGACCTGCATGTAGCGGTTGCTGAGGGC +
Preference number: 6 (lower is better)
Translates to: HPSDALEEPSKA*EPDLHVAVAEG
Trigger: GCCCTCAGCAACCGCTACATGCAGGTCTGGTTCTCAGGCCTTACTGGGCTCCTCAAGAGCATCCGAAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000559717.6
ENST00000560451.5
CDS GCA 72 bp GCCGCTAGGGTGGAGAGGACGCTCTCCTTTGGCTGGTaGTATGAAAAACGGGCCCAGGATAAGAGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: AARVERTLSFGW*YEKRAQDKSPS
Trigger: GCTGGGACTCTTATCCTGGGCCCGTTTTTCATAGCACCAGCCAAAGGAGAGCGTCCTCTCCACCCTAGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS CCA 72 bp GGACCATGGAGCACGGACCTCCAATCCAGAGTGCTCTaGGTAATCTGCGGCTTCACGAGCGATGCCACATCC +
Preference number: 6 (lower is better)
Translates to: GPWSTDLQSRVL*VICGFTSDATS
Trigger: GGATGTGGCATCGCTCGTGAAGCCGCAGATTACCCAGAGCACTCTGGATTGGAGGTCCGTGCTCCATGGTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559558.1
CDS CAA 72 bp AGTGAAAGGGCTGGAAGCAGATACCTCTCTGCCACGTaGGCCTCTGTGATGGCCCGGGGTGGCACCTTCCAA +
Preference number: 6 (lower is better)
Translates to: SERAGSRYLSAT*ASVMARGGTFQ
Trigger: TTGGAAGGTGCCACCCCGGGCCATCACAGAGGCCAACGTGGCAGAGAGGTATCTGCTTCCAGCCCTTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561046.1
CDS CAA 90 bp GTCTTCAGCATCCCAGTCGTGCGGGTCGTAGGAGATGTCGAAGCCTaGCCTCCACACACCACCATCCACGTTGTCAAACGGCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: VFSIPVVRVVGDVEA*PPHTTIHVVKRQLL
Trigger: GAGGAGCTGCCGTTTGACAACGTGGATGGTGGTGTGTGGAGGCAAGGCTTCGACATCTCCTACGACCCGCACGACTGGGATGCTGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS CAA 90 bp GTCCTGGTAGCAGCTCTGCCGCTAGGGTGGAGAGGACGCTCTCCTTaGGCTGGTGCTATGAAAAACGGGCCCAGGATAAGAGTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: VLVAALPLGWRGRSP*AGAMKNGPRIRVPA
Trigger: AGCTGGGACTCTTATCCTGGGCCCGTTTTTCATAGCACCAGCCAAAGGAGAGCGTCCTCTCCACCCTAGCGGCAGAGCTGCTACCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS TCA 72 bp GGACACCATCAGAACTCTGCTCTCAGCATGTCACGCTaGGGGACACTCACCTCAGCCTGGAGCGTACGTAGG +
Preference number: 6 (lower is better)
Translates to: GHHQNSALSMSR*GTLTSAWSVRR
Trigger: CCTACGTACGCTCCAGGCTGAGGTGAGTGTCCCTCAGCGTGACATGCTGAGAGCAGAGTTCTGATGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560880.1
CDS TCA 72 bp TCCAGCTGGATCACCGTGCGCTCTGGGAGGGCGTCGTaGCTTAAGCGAGTGTCATCCTGGAATTCAGTGAGC +
Preference number: 6 (lower is better)
Translates to: SSWITVRSGRAS*LKRVSSWNSVS
Trigger: GCTCACTGAATTCCAGGATGACACTCGCTTAAGTCACGACGCCCTCCCAGAGCGCACGGTGATCCAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS TCA 72 bp ACCCTGGCCTTTTACCTTGAGGAGCCCAGTAAGGCCTaGGAACCAGACCTGCATGTAGCGGTTGCTGAGGGC +
Preference number: 6 (lower is better)
Translates to: TLAFYLEEPSKA*EPDLHVAVAEG
Trigger: GCCCTCAGCAACCGCTACATGCAGGTCTGGTTCTCAGGCCTTACTGGGCTCCTCAAGGTAAAAGGCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559374.1
CDS GCA 72 bp CATGTGACAGAAGATGTCTGTGCTGGAGTCCGAGTCTaGAGGAGACACACCACGTGGTCACCACCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: HVTEDVCAGVRV*RRHTTWSPPAG
Trigger: GCCTGCTGGTGGTGACCACGTGGTGTGTCTCCTGCAGACTCGGACTCCAGCACAGACATCTTCTGTCACATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558640.5
CDS GCA 72 bp AGCACGGACCTCCAATCCAGAGTGCTCTGGGTAATCTaGGGCTTCACGAGCGATGCCACATCCACAGTGCCA +
Preference number: 6 (lower is better)
Translates to: STDLQSRVLWVI*GFTSDATSTVP
Trigger: TGGCACTGTGGATGTGGCATCGCTCGTGAAGCCGCAGATTACCCAGAGCACTCTGGATTGGAGGTCCGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559558.1
CDS GCA 72 bp AGCGCACCACACAAGCTCCTGATTACACAGCTTCCCTaGCTAGATAGGAGGTGCCTGTTCAGGCTCCTCGGC +
Preference number: 6 (lower is better)
Translates to: SAPHKLLITQLP*LDRRCLFRLLG
Trigger: GCCGAGGAGCCTGAACAGGCACCTCCTATCTAGGCAGGGAAGCTGTGTAATCAGGAGCTTGTGTGGTGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS GCA 72 bp ACTGTTCACTGCAGTGGGAAACTTCCAGCCGCGGTTTaGAGAGCACTTAGGGGACCCCTAGGAAGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: TVHCSGKLPAAV*RALRGPLGSLQ
Trigger: CTGCAGGCTTCCTAGGGGTCCCCTAAGTGCTCTGCAAACCGCGGCTGGAAGTTTCCCACTGCAGTGAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558290.5
CDS CCA 72 bp ACAGAAATTTGGCTCCGGGGGAAGTTCCCACCATTCTaGTGTCGGGTGGGATCGTGTTGCACTCGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: TEIWLRGKFPPF*CRVGSCCTRSS
Trigger: GCTGGACCGAGTGCAACACGATCCCACCCGACACCAGAATGGTGGGAACTTCCCCCGGAGCCAAATTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000558290.5
ENST00000558853.5
ENST00000559717.6
ENST00000559965.5
ENST00000559999.5
ENST00000560192.5
ENST00000560451.5
CDS CCA 72 bp CCAAGAGGCACCAGGAGGACGTTGCTTCGGAACAGCTaGGACTTCTTCCGGTATTGGTCCAGAAGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: PRGTRRTLLRNS*DFFRYWSRSRA
Trigger: AGCCCTGCTTCTGGACCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCCTCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS CCA 72 bp TCTGCCGCTAGGGTGGAGAGGACGCTCTCCTTTGGCTaGTGCTATGAAAAACGGGCCCAGGATAAGAGTCCC +
Preference number: 6 (lower is better)
Translates to: SAARVERTLSFG*CYEKRAQDKSP
Trigger: GGGACTCTTATCCTGGGCCCGTTTTTCATAGCACCAGCCAAAGGAGAGCGTCCTCTCCACCCTAGCGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS CCA 72 bp ACACACCTGGTCCTGGTAGCAGCTCTGCCGCTAGGGTaGAGAGGACGCTCTCCTTTGGCTGGTGCTATGAAA +
Preference number: 6 (lower is better)
Translates to: THLVLVAALPLG*RGRSPLAGAMK
Trigger: TTTCATAGCACCAGCCAAAGGAGAGCGTCCTCTCCACCCTAGCGGCAGAGCTGCTACCAGGACCAGGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559965.5
CDS CAA 72 bp ATCCCAGTCGTGCGGGTCGTAGGAGATGTCGAAGCCTaGCCTCCACACACCACCATCCACGTTGTCAAACGG +
Preference number: 6 (lower is better)
Translates to: IPVVRVVGDVEA*PPHTTIHVVKR
Trigger: CCGTTTGACAACGTGGATGGTGGTGTGTGGAGGCAAGGCTTCGACATCTCCTACGACCCGCACGACTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS CAA 72 bp GCAGCTCTGCCGCTAGGGTGGAGAGGACGCTCTCCTTaGGCTGGTGCTATGAAAAACGGGCCCAGGATAAGA +
Preference number: 6 (lower is better)
Translates to: AALPLGWRGRSP*AGAMKNGPRIR
Trigger: TCTTATCCTGGGCCCGTTTTTCATAGCACCAGCCAAAGGAGAGCGTCCTCTCCACCCTAGCGGCAGAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS CAA 90 bp GGTGGCACCTTCCAAGGGCAGTTGATGCGCCCACCAGGCAGGCGTTaGAAATCAAATTGGCAGCAGATCTTGGGATCTGGGCCACAGGTA +
Preference number: 6 (lower is better)
Translates to: GGTFQGQLMRPPGRR*KSNWQQILGSGPQV
Trigger: TACCTGTGGCCCAGATCCCAAGATCTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTGGGCGCATCAACTGCCCTTGGAAGGTGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000561046.1
CDS TCA 72 bp CTGTGCTGGAGTCCGAGTCCCATGTCTGCCTCCACATaGACTCTAGGCTGTGGGTGGCAGCAAAGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: LCWSPSPMSAST*TLGCGWQQSAS
Trigger: AGAAGCACTTTGCTGCCACCCACAGCCTAGAGTTCATGTGGAGGCAGACATGGGACTCGGACTCCAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000561046.1
CDS TCA 72 bp GGTGGCTTTCAAAGGAGAATCCCAAGCCACAGGCCCTaGCGGAAAAGCGCAGCTCGAGAGACAGAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: GGFQRRIPSHRP*RKSAARETEAE
Trigger: CTCAGCTTCTGTCTCTCGAGCTGCGCTTTTCCGTCAGGGCCTGTGGCTTGGGATTCTCCTTTGAAAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560926.5
CDS CAA 72 bp GCCGCTCTCTTTTGGACATTGATGTTGTCCCACCACTaGGCGAAGAAGGAGACCTCTGCCCAGAGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: AALFWTLMLSHH*AKKETSAQRKR
Trigger: GCGCTTCCTCTGGGCAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS CAA 72 bp CCCACCAGCCTTCGGACTGCCGCTCTCTTTTGGACATaGATGTTGTCCCACCACTTGGCGAAGAAGGAGACC +
Preference number: 6 (lower is better)
Translates to: PTSLRTAALFWT*MLSHHLAKKET
Trigger: GGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS CAA 90 bp TTTCCCACCAGCCTTCGGACTGCCGCTCTCTTTTGGACATTGATGTaGTCCCACCACTTGGCGAAGAAGGAGACCTCTGCCCAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: FPTSLRTAALFWTLM*SHHLAKKETSAQRK
Trigger: CTTCCTCTGGGCAGAGGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS TCA 72 bp CCACCAGCCTTCGGACTGCCGCTCTCTTTTGGACATTaGTGTTGTCCCACCACTTGGCGAAGAAGGAGACCT +
Preference number: 6 (lower is better)
Translates to: PPAFGLPLSFGH*CCPTTWRRRRP
Trigger: AGGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS TCA 72 bp CTGACCTTTCAAAGGAGAATCCCAAGCCACAGGCCCTaGCGGAAAAGCGCAGCTCGAGAGACAGAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: LTFQRRIPSHRP*RKSAARETEAE
Trigger: CTCAGCTTCTGTCTCTCGAGCTGCGCTTTTCCGTCAGGGCCTGTGGCTTGGGATTCTCCTTTGAAAGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559341.5
CDS TCA 72 bp AGGTCAGGTGGCTCTCGGTTACCGCTCCTGCTGCTGTaGAAGATCAAGCCCCTAAACATGGCTGCCAGTTTG +
Preference number: 6 (lower is better)
Translates to: RSGGSRLPLLLL*KIKPLNMAASL
Trigger: CAAACTGGCAGCCATGTTTAGGGGCTTGATCTTTCACAGCAGCAGGAGCGGTAACCGAGAGCCACCTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558374.5
CDS CCA 72 bp CCGTTTCCCACCAGCCTTCGGACTGCCGCTCTCTTTTaGACATTGATGTTGTCCCACCACTTGGCGAAGAAG +
Preference number: 6 (lower is better)
Translates to: PFPTSLRTAALF*TLMLSHHLAKK
Trigger: CTTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTGGGAAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS CCA 72 bp GAAAAACGGGCCCAGGATAAGAGTCCCAGCTCCGACTaGAGCGCACCACACAAGCTCCTGATTACACAGCTT +
Preference number: 6 (lower is better)
Translates to: EKRAQDKSPSSD*SAPHKLLITQL
Trigger: AAGCTGTGTAATCAGGAGCTTGTGTGGTGCGCTCCAGTCGGAGCTGGGACTCTTATCCTGGGCCCGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559965.5
ENST00000560192.5
CDS CCA 72 bp CCCCACACACTGTCACCTGCTTTTTCAGCTTCATACTaGCCTCCACACACACCTGCTCAGGAGGAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: PHTLSPAFSASY*PPHTPAQEEGG
Trigger: TCCTCCTTCCTCCTGAGCAGGTGTGTGTGGAGGCCAGTATGAAGCTGAAAAAGCAGGTGACAGTGTGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558853.5
ENST00000559717.6
CDS CAA 72 bp CCCGTTTCCCACCAGCCTTCGGACTGCCGCTCTCTTTaGGACATTGATGTTGTCCCACCACTTGGCGAAGAA +
Preference number: 6 (lower is better)
Translates to: PVSHQPSDCRSL*DIDVVPPLGEE
Trigger: TTCTTCGCCAAGTGGTGGGACAACATCAATGTCCAAAAGAGAGCGGCAGTCCGAAGGCTGGTGGGAAACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS CAA 90 bp GGCTTGTCATATCGGAAGTCATCTCCAAGAGGCACCAGGAGGACGTaGCTTCGGAACAGCTGGGACTTCTTCCGGTATTGGTCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: GLSYRKSSPRGTRRT*LRNSWDFFRYWSRS
Trigger: GCTTCTGGACCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCCTCTTGGAGATGACTTCCGATATGACAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS TCA 72 bp CGTCGTGACTTAAGCGAGTGTCATCCTGGAATTCAGTaGGCCGGAAGGGAAGAACCATCATGGGCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: RRDLSECHPGIQ*AGREEPSWAQP
Trigger: AGGCTGAGCCCATGATGGTTCTTCCCTTCCGGCTCACTGAATTCCAGGATGACACTCGCTTAAGTCACGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560505.1
CDS TCA 72 bp TTGTCGCCTCTGCGTTGTGCCCTACTTAGCGCGATCTaGTTCTGCTCGGGAGCTTCCGGGCAATATTTTCAG +
Preference number: 6 (lower is better)
Translates to: LSPLRCALLSAI*FCSGASGQYFQ
Trigger: CTGAAAATATTGCCCGGAAGCTCCCGAGCAGAATCAGATCGCGCTAAGTAGGGCACAACGCAGAGGCGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558290.5
ENST00000558853.5
ENST00000560534.2
CDS GCA 72 bp GTAGGTCTCCTTGTCCCCCAGCACCAGATAGTGGGCTaGATGAATGATGACCTGCTTCAGGTTGACAAGGGA +
Preference number: 6 (lower is better)
Translates to: VGLLVPQHQIVG*MNDDLLQVDKG
Trigger: TCCCTTGTCAACCTGAAGCAGGTCATCATTCATGCAGCCCACTATCTGGTGCTGGGGGACAAGGAGACCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000558171.1
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560505.1
ENST00000560616.5
ENST00000561240.1
CDS CCA 72 bp TGGGTAAGGAAAGGCCAAAACCTGGTCCTGGAGGTTTaGAGCCGAATACCTGCTAAGGGGTCTGGACCTCAT +
Preference number: 6 (lower is better)
Translates to: WVRKGQNLVLEV*SRIPAKGSGPH
Trigger: ATGAGGTCCAGACCCCTTAGCAGGTATTCGGCTCCAAACCTCCAGGACCAGGTTTTGGCCTTTCCTTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560880.1
CDS CCA 72 bp TTCCTGAGGGCTGTTCCAAAGGAACACCCATTTGCCTaGCTCCAAGTAGCACAAGCAGCACATCTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: FLRAVPKEHPFA*LQVAQAAHLRL
Trigger: CAGCCTCAGATGTGCTGCTTGTGCTACTTGGAGCCAGGCAAATGGGTGTTCCTTTGGAACAGCCCTCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560192.5
CDS CAA 72 bp TTCCAAGGGCAGTTGATGCGCCCACCAGGCAGGCGTTaGAAATCAAATTGGCAGCAGATCTTGGGATCTGGG +
Preference number: 6 (lower is better)
Translates to: FQGQLMRPPGRR*KSNWQQILGSG
Trigger: CCCAGATCCCAAGATCTGCTGCCAATTTGATTTCAAACGCCTGCCTGGTGGGCGCATCAACTGCCCTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000561046.1
CDS CAA 72 bp TATCGGAAGTCATCTCCAAGAGGCACCAGGAGGACGTaGCTTCGGAACAGCTGGGACTTCTTCCGGTATTGG +
Preference number: 6 (lower is better)
Translates to: YRKSSPRGTRRT*LRNSWDFFRYW
Trigger: CCAATACCGGAAGAAGTCCCAGCTGTTCCGAAGCAACGTCCTCCTGGTGCCTCTTGGAGATGACTTCCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS CAA 72 bp GAGGTTAGGCCTGCTGTTGAAGAAGTCAAAGAGCCGTaGGTAGTTGAAGAACTGGGCATCCCACTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: EVRPAVEEVKEP*VVEELGIPLLG
Trigger: CCCCAGGAGTGGGATGCCCAGTTCTTCAACTACCAACGGCTCTTTGACTTCTTCAACAGCAGGCCTAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS CAA 90 bp CCGGGGGTCCTCCTGCAGCTTAGACACCATGCTATTGAGGATGTGTaGGGTCTGCTCTGTGTAGTACTTGTCAAAGGTCTTGATCCAGCC +
Preference number: 6 (lower is better)
Translates to: PGVLLQLRHHAIEDV*GLLCVVLVKGLDPA
Trigger: GGCTGGATCAAGACCTTTGACAAGTACTACACAGAGCAGACCCAACACATCCTCAATAGCATGGTGTCTAAGCTGCAGGAGGACCCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS GCA 72 bp CCTGCTGCTGTGAAAGATCAAGCCCCTAAACATGGCTaGCAGTTTGGAGAAAAAGTCAGGCTCACTGCCCAC +
Preference number: 6 (lower is better)
Translates to: PAAVKDQAPKHG*QFGEKVRLTAH
Trigger: GTGGGCAGTGAGCCTGACTTTTTCTCCAAACTGGCAGCCATGTTTAGGGGCTTGATCTTTCACAGCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557990.1
CDS CAA 90 bp CTGCACATGGAGGTTAGGCCTGCTGTTGAAGAAGTCAAAGAGCCGTaGGTAGTTGAAGAACTGGGCATCCCACTCCTGGGGCTTGTCATA +
Preference number: 6 (lower is better)
Translates to: LHMEVRPAVEEVKEP*VVEELGIPLLGLVI
Trigger: TATGACAAGCCCCAGGAGTGGGATGCCCAGTTCTTCAACTACCAACGGCTCTTTGACTTCTTCAACAGCAGGCCTAACCTCCATGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000557865.5
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
ENST00000560616.5
CDS TCA 72 bp AAATGCCCGTGGCAGTCTTTCCACCAAATACCCCAGTaGGTTCCTGAGGGCTGTTCCAAAGGAACACCCATT +
Preference number: 6 (lower is better)
Translates to: KCPWQSFHQIPQ*VPEGCSKGTPI
Trigger: AATGGGTGTTCCTTTGGAACAGCCCTCAGGAACTCACTGGGGTATTTGGTGGAAAGACTGCCACGGGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560192.5
CDS GCA 72 bp CAGCCACTGGTGTCCTTCGATGAGCTGGTCAATCAATaGAAAGTAGTGGGAATTGGCCTCATCTGGCATCAC +
Preference number: 6 (lower is better)
Translates to: QPLVSFDELVNQ*KVVGIGLIWHH
Trigger: GTGATGCCAGATGAGGCCAATTCCCACTACTTTGCATTGATTGACCAGCTCATCGAAGGACACCAGTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000558640.5
ENST00000559132.3
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5
CDS GCA 72 bp GAGTCCCTTTCCTTTCCGTGCCTGCTCTATGTTTCCTaGCAGCGAGTGAACAAGACACAGACTTTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: ESLSFPCLLYVS*QRVNKTQTFLG
Trigger: GCCAAGAAAAGTCTGTGTCTTGTTCACTCGCTGGCAGGAAACATAGAGCAGGCACGGAAAGGAAAGGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558290.5
ENST00000558853.5
CDS CCA 72 bp TCCAGCACGGAGTCCTTGATATGGCTGATAATCTCATaGTTCTCCTCCAAAAGCTGCTCCAGCTGCTCAATG +
Preference number: 6 (lower is better)
Translates to: SSTESLIWLIIS*FSSKSCSSCSM
Trigger: CATTGAGCAGCTGGAGCAGCTTTTGGAGGAGAACCATGAGATTATCAGCCATATCAAGGACTCCGTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000559999.5
ENST00000560192.5
ENST00000560451.5
CDS CCA 72 bp TTCATACTGGCCTCCACACACACCAGAAACAGTGCCTaGCACGATCCTTTCTCAGAAACACAGAATGAGTTT +
Preference number: 6 (lower is better)
Translates to: FILASTHTRNSA*HDPFSETQNEF
Trigger: AAACTCATTCTGTGTTTCTGAGAAAGGATCGTGCCAGGCACTGTTTCTGGTGTGTGTGGAGGCCAGTATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558290.5
CDS CAA 72 bp CTCCTGCAGCTTAGACACCATGCTATTGAGGATGTGTaGGGTCTGCTCTGTGTAGTACTTGTCAAAGGTCTT +
Preference number: 6 (lower is better)
Translates to: LLQLRHHAIEDV*GLLCVVLVKGL
Trigger: AAGACCTTTGACAAGTACTACACAGAGCAGACCCAACACATCCTCAATAGCATGGTGTCTAAGCTGCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360468.7
ENST00000558161.5
ENST00000559717.6
ENST00000560192.5
ENST00000560451.5