RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAN2A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112893

Ensembl transcript IDs: ENST00000261483.5, ENST00000502261.5, ENST00000503970.2, ENST00000505313.1, ENST00000508043.1, ENST00000513921.1

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCACAGACAAACTGAACTCCCACAGGAAGGTTATACATTTAAGATaGAATGAAAATACTGATCTCATTCCTGGGATTTGCTTCTGGCAA +
Preference number: 1 (lower is better)
Translates to: TTDKLNSHRKVIHLR*NENTDLIPGICFWQ
Trigger: TTGCCAGAAGCAAATCCCAGGAATGAGATCAGTATTTTCATTGCATCTTAAATGTATAACCTTCCTGTGGGAGTTCAGTTTGTCTGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAATCCTTGCTTCAAGTTaGAGTTTCCTTGGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEILASS*SFLGSS
Trigger: GCTGCTGCCAAGGAAACTGCAACTTGAAGCAAGGAT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR TCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAAATAAAACCCCAGACTaGCATGGGACAGATCCATCG +
Preference number: 2 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRNKTPD*HGTDPS
Trigger: CGATGGATCTGTCCCATGTCAGTCTGGGGTTTTATT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR TCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAAGGATGCTGAGTTCTTaGACACTGCAGTCACAAACT +
Preference number: 2 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRRMLSS*TLQSQT
Trigger: AGTTTGTGACTGCAGTGTTCAAGAACTCAGCATCCT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAAACAGATCAGAATGTaGCCAGCATTGTCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEKQIRM*PALSGK
Trigger: TTTGCCTGACAATGCTGGCCACATTCTGATCTGTTT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAATTAGGAGCTGCATCTTaGGTGAAAATCCAGATGATA +
Preference number: 2 (lower is better)
Translates to: PDKGISKHFGTSTTKAWELGAAS*VKIQMI
Trigger: TATCATCTGGATTTTCACTCAAGATGCAGCTCCTAA...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR GCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATAATGTGCTTCTTTATTaGACGTCAAACCAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHNVLLY*TSNQER
Trigger: CCTTTCTTGGTTTGACGTGCAATAAAGAAGCACATT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAAGATGGAATAAATTaGACCCATCCCACATTGTCA +
Preference number: 2 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEEDGIN*THPTLS
Trigger: TGACAATGTGGGATGGGTGCAATTTATTCCATCTTC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATAAGTTGCAGTTTCCTTaGCAGCAGCACATTTTAATT +
Preference number: 2 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHKLQFP*QQHILI
Trigger: AATTAAAATGTGCTGCTGCCAAGGAAACTGCAACTT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAATGACAAGAGGTAAATaGAGGTTGAAAGCCACAGAA +
Preference number: 2 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEMTRGK*RLKATE
Trigger: TTCTGTGGCTTTCAACCTCCATTTACCTCTTGTCAT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAGCAAACAACCAGAAGTaGCAAAACCACTGTTATTGC +
Preference number: 2 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRANNQK*QNHCYC
Trigger: GCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGC...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAAGGAAAGAAAACACTaGACTACTTGGTCAACTGAA +
Preference number: 2 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEKERKH*TTWSTE
Trigger: TTCAGTTGACCAAGTAGTTCAGTGTTTTCTTTCCTT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR GCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATACGGTACATGTTTATTaGATGAAATTACCCCTTGTA +
Preference number: 2 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHTVHVY*MKLPLV
Trigger: TACAAGGGGTAATTTCATGCAATAAACATGTACCGT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAATAATCTTAGGAGCTaGATCTTGAGTGAAAATCCA +
Preference number: 2 (lower is better)
Translates to: PDKGISKHFGTSTTKAWENNLRS*ILSENP
Trigger: TGGATTTTCACTCAAGATGCAGCTCCTAAGATTATT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAACCTAAAATAGGTTTATaGTACCTATGGAATTGCTTC +
Preference number: 2 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEPKIGL*YLWNCF
Trigger: GAAGCAATTCCATAGGTACCATAAACCTATTTTAGG...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CAA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATAATCCTTGCTTCAAGTaGCAGTTTCCTTGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHNPCFK*QFPWQQ
Trigger: CTGCTGCCAAGGAAACTGCAACTTGAAGCAAGGATT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CAA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAATCTCATTCCTGGGATTaGCTTCTGGCAACCCTAACA +
Preference number: 3 (lower is better)
Translates to: PDKGISKHFGTSTTKAWESHSWD*LLATLT
Trigger: TGTTAGGGTTGCCAGAAGCAAATCCCAGGAATGAGA...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CAA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAATGATTGCAACCATTTaGGCCATTAGCTTTTACCCA +
Preference number: 3 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEMIATI*AISFYP
Trigger: TGGGTAAAAGCTAATGGCCAAAATGGTTGCAATCAT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CAA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATTACGGTACATGTTTATaGCATGAAATTACCCCTTGT +
Preference number: 3 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHYGTCL*HEITPC
Trigger: ACAAGGGGTAATTTCATGCAATAAACATGTACCGTA...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGATGCACCCATCCCACATaGTCAAGTAATGAAAATATG +
Preference number: 3 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRCTHPT*SSNENM
Trigger: CATATTTTCATTACTTGACAATGTGGGATGGGTGCA...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CAA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAACATTTTACAAAATCCTaGCTTCAAGTTGCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEHFTKS*LQVAVS
Trigger: GGAAACTGCAACTTGAAGCAAGGATTTTGTAAAATG...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCAAGTTGCAGTTTCCTaGGCAGCAGCACATTTTAAT +
Preference number: 3 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAQVAVS*AAAHFN
Trigger: ATTAAAATGTGCTGCTGCCAAGGAAACTGCAACTTG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR GCA 72 bp AAACTGAACTCCCACAGGAAGGTTATACATTTAAGATaGAATGAAAATACTGATCTCATTCCTGGGATTTGC +
Preference number: 3 (lower is better)
Translates to: KLNSHRKVIHLR*NENTDLIPGIC
Trigger: GCAAATCCCAGGAATGAGATCAGTATTTTCATTGCATCTTAAATGTATAACCTTCCTGTGGGAGTTCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
3UTR-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTATAAGGGTGGATGGATaGCACTTTTCCACTTATTTC +
Preference number: 3 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAIRVDG*HFSTYF
Trigger: GAAATAAGTGGAAAAGTGCAATCCATCCACCCTTAT...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAACGGAGGAGAGGTCGCTaGCCGCACTTCCTGCCACCG +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWERRRGR*PHFLPP
Trigger: CGGTGGCAGGAAGTGCGGGCAGCGACCTCTCCTCCG...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGCTCTCGGATGCGGGTaGGAGTCCCCGCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEALGCG*ESPPCS
Trigger: GGAGCAAGGCGGGGACTCGCACCCGCATCCGAGAGC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAGCCACCACACGCCCTTaGCCTTCGCCCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRATTRP*PSPWPA
Trigger: GGCAGGCCAGGGCGAAGGCCAAGGGCGTGTGGTGGC...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGACGCGGCGCGGGTTCCTaGGGTAGTCTAAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRRGAGS*GSLSDP
Trigger: GGGGTCACTTAGACTACCCCAGGAACCCGCGCCGCG...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCTCCGCGCTCTCGGATaGGGGTGCGAGTCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVALRALG*GCESPP
Trigger: AGGCGGGGACTCGCACCCGCATCCGAGAGCGCGGAG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTTCCCTTCTCCCGGGCTaGGCGACCTCCGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVASLLPG*ATSALS
Trigger: CGAGAGCGCGGAGGTCGCGCAGCCCGGGAGAAGGGA...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTTGCGAGTCCCCGCCTTaGTCCGCACCTAGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVACESPP*SAPSLR
Trigger: CCGGAGACTAGGTGCGGAGCAAGGCGGGGACTCGCA...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGCTGCCTCATTGGAGTaGCCATTGCCCACCTTTGAC +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEAASLE*PLPTFD
Trigger: GTCAAAGGTGGGCAATGGGCACTCCAATGAGGCAGC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGGGCCCCCACAAACTTaGTCGCAAGCTCAGCGCCGA +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAGPPQT*SQAQRR
Trigger: TCGGCGCTGAGCTTGCGATCAAGTTTGTGGGGGCCC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGTAGCATCCGAGCCCTaGTTTGGACATTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHVASEP*FGHFQD
Trigger: ATCCTGGAAATGTCCAAAGCAGGGCTCGGATGCTAC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGGAGAGAATTCACCTTaGAGCTCAAGGGTAGGTGAG +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHGENSP*SSRVGE
Trigger: CTCACCTACCCTTGAGCTGCAAGGTGAATTCTCTCC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGTGGAGGATCAAGGCTaGCTCATTGGAGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEVEDQG*LIGVPI
Trigger: AATGGGCACTCCAATGAGGCAGCCTTGATCCTCCAC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGTCCCAAATTCCTTCTaGCTTCTGTCAGTGCCGTGT +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHVPNSF*LLSVPC
Trigger: ACACGGCACTGACAGAAGCCAGAAGGAATTTGGGAC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGACTTCTTTCGGTACTaGTCTAGTAGCATCCGAGCC +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEDFFRY*SSSIRA
Trigger: GGCTCGGATGCTACTAGATCAGTACCGAAAGAAGTC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGGAACTCACATAGACTaGGACCAACGAGATTCGGTC +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEGTHID*DQRDSV
Trigger: GACCGAATCTCGTTGGTCTCAGTCTATGTGAGTTCC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATTATCCCAAACTGCGCTaGCTTGAACTTCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHYPKLR*LELPQV
Trigger: AACCTGTGGAAGTTCAAGTCAGCGCAGTTTGGGATA...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGGTAGCAACACAAGCTaGATAAAACCCCAGACTGAC +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHGSNTS*IKPQTD
Trigger: GTCAGTCTGGGGTTTTATTCAGCTTGTGTTGCTACC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGTGCCGGGAGGTGAATaGATCAAGGATAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHVPGGE*IKDSDE
Trigger: TTCATCACTATCCTTGATGCATTCACCTCCCGGCAC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGGAGACAGCGCACTGTaGACTCTAGGAAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAGDSAL*TLGSSR
Trigger: GCGGCTGCTTCCTAGAGTCCACAGTGCGCTGTCTCC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAACCCCAGACTGACATaGGACAGATCCATCGCAAAC +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWENPRLT*DRSIAN
Trigger: GTTTGCGATGGATCTGTCCCATGTCAGTCTGGGGTT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCACCGCCGCCCCAACTaGGTCGGCAGGAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAHRRPN*VGRKSF
Trigger: AAAACTTTTCCTGCCGACTCAGTTGGGGCGGCGGTG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAATAAAACCCCAGACTaGCATGGGACAGATCCATCG +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWENKTPD*HGTDPS
Trigger: CGATGGATCTGTCCCATGTCAGTCTGGGGTTTTATT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATAGGATGCTGAGTTCTTaGACACTGCAGTCACAAACT +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHRMLSS*TLQSQT
Trigger: AGTTTGTGACTGCAGTGTTCAAGAACTCAGCATCCT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATAACCACCCAGTCTTTTaGAGTTCCTGTGATAGCATC +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHNHPVF*SSCDSI
Trigger: GATGCTATCACAGGAACTGCAAAAGACTGGGTGGTT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAGAAGCAGAGAACACTTaGACTGTCGGGGAACTCACA +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGREAENT*TVGELT
Trigger: TGTGAGTTCCCCGACAGTGCAAGTGTTCTCTGCTTC...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAACATTGGAGTGCCCATTaGCCACCTTTGACTGTATTG +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEHWSAH*PPLTVL
Trigger: CAATACAGTCAAAGGTGGGCAATGGGCACTCCAATG...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAACCGAACACGGTGAACTaGCGGCTTAACTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEPNTVN*RLNFIF
Trigger: GAAAATGAAGTTAAGCCGCCAGTTCACCGTGTTCGG...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATCAGGTTCACCTCAACTaGATTCGGAATGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHQVHLN*IRNVLI
Trigger: AATCAGCACATTCCGAATCCAGTTGAGGTGAACCTG...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCACTGCCGAACACGGTaGACTGGCGGCTTAACTTCA +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAHCRTR*TGGLTS
Trigger: TGAAGTTAAGCCGCCAGTTCACCGTGTTCGGCAGTG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGATTTTTCTTGCAACATTaGGAGCTGGCCCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRFFLQH*ELALRE
Trigger: TTCCCTCAGGGCCAGCTCTCAATGTTGCAAGAAAAA...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAGCCAGCACCTTGGCTaGAATTGCTTTGTGAACTTT +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWESQHLG*NCFVNF
Trigger: AAAGTTCACAAAGCAATTTCAGCCAAGGTGCTGGCT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATTGCACATCTGAATTGTaGCTTCCACTTTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHCTSEL*LPLCEA
Trigger: TGCTTCACAAAGTGGAAGTCACAATTCAGATGTGCA...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAATCAGCAGCCCTTAAATaGGATTCCATGATTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWESAALK*DSMILS
Trigger: GGACAGAATCATGGAATCTCATTTAAGGGCTGCTGA...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGGAGAGAAGGATAACTaGCCGACTTCTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHGEKDN*PTSFLL
Trigger: AAGAAGAAAAGAAGTCGGTCAGTTATCCTTCTCTCC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGATGCTGTATCCCAAACTaGGCTGACTTGAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRCCIPN*ADLNFH
Trigger: GTGGAAGTTCAAGTCAGCGCAGTTTGGGATACAGCA...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGAGCCAGGAGAACTTTaGTACGAAAAAGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHEPGEL*YEKALT
Trigger: AGTCAAAGCTTTTTCGTACCAAAGTTCTCCTGGCTC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGCAAACAACCAGAAGTaGCAAAACCACTGTTATTGC +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHANNQK*QNHCYC
Trigger: GCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAGCTGAAATTGCTTTGTaGACTTTTCGGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRAEIAL*TFRTIL
Trigger: GAGGATGGTCCGAAAAGTTCACAAAGCAATTTCAGC...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGGCACCACAAAGACTTaGAGGGGTTCAGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAGTTKT*RGSVSH
Trigger: ATGGGACACTGAACCCCTTCAAGTCTTTGTGGTGCC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGGTACGAAAAAGCTTTaGCTTCTTTCGGTACTGATC +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEGTKKL*LLSVLI
Trigger: GATCAGTACCGAAAGAAGTCAAAGCTTTTTCGTACC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAACCCATTGCCCACCTTTaGCTGTATTGTTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEPIAHL*LYCSQI
Trigger: AATTTGAGAACAATACAGTCAAAGGTGGGCAATGGG...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAGGATTCGGAATGTGCTaGTTTCCATTGGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRGFGMC*FPLDSS
Trigger: ACTTGAGTCCAATGGAAATCAGCACATTCCGAATCC...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAGAAAACAAGGATGCTaGGTTCTTGAACACTGCAGT +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWERKQGC*VLEHCS
Trigger: ACTGCAGTGTTCAAGAACTCAGCATCCTTGTTTTCT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATCAATGGCGGTATATGTaGTCGAAAAGAGATCTCATA +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHQWRYM*SKRDLI
Trigger: TATGAGATCTCTTTTCGAGCACATATACCGCCATTG...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAACCACGATTATCATCTTaGATGAGTCTTCGATCCATG +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEPRLSS*MSLRSM
Trigger: CATGGATCGAAGACTCATGCAAGATGATAATCGTGG...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTAGGATGTATTGTTTCTaGGGGGACTCCCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVARMYCF*GDSPGT
Trigger: TGTCCCTGGGGAGTCCCCCCAGAAACAATACATCCT...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAATCCGAGCCCTGCTTTaGACATTTCCAGGATGTATT +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRIRALL*TFPGCI
Trigger: AATACATCCTGGAAATGTCCAAAGCAGGGCTCGGAT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGACCACAAGGTACCTTaGCTCCGCACTCAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVADHKVP*LRTQPY
Trigger: ATAAGGCTGAGTGCGGAGCCAAGGTACCTTGTGGTC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGACACTTTCAGTCCCAATaGCGGTATATGTGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRHFQSQ*RYMCSK
Trigger: TTTCGAGCACATATACCGCCATTGGGACTGAAAGTG...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAGGCCATTGTGGTCATaGGATAGACATTTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWERPLWS*DRHLLE
Trigger: TTCAAGCAAATGTCTATCCCATGACCACAATGGCCT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGGATATAGGCCATTGTaGTCATGGGATAGACATTTG +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEGYRPL*SWDRHL
Trigger: CAAATGTCTATCCCATGACCACAATGGCCTATATCC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGTAATCTTGTTATCCTaGATACCTTGCTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEVILLS*IPCSRP
Trigger: TGGCCTTGAGCAAGGTATCCAGGATAACAAGATTAC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATACAGCATCCTTCTTCTaGATATCTATAATATCCCAC +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHTASFF*ISIISH
Trigger: GTGGGATATTATAGATATTCAGAAGAAGGATGCTGT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAATTTATCTTGTATTTGTaGGCTTGTCTCAGGGCGAAA +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEFILYL*ACLRAK
Trigger: TTTCGCCCTGAGACAAGCTCACAAATACAAGATAAA...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTTTCCATGTGTCACTCTaGCAAAGGGCGGTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAFHVSL*QRAVLC
Trigger: ACACAACACCGCCCTTTGTCAGAGTGACACATGGAA...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAATTCTCAATCCAAATGTaGAAGTCAGGTTCACCTCAA +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEFSIQM*KSGSPQ
Trigger: TTGAGGTGAACCTGACTTTCACATTTGGATTGAGAA...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAGGTAAATGGAGGTTaGAAGCCACAGAATATGAAA +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEEVNGG*KPQNMK
Trigger: TTTCATATTCTGTGGCTTTCAACCTCCATTTACCTC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATAAGGAAAGAAAACACTaGACTACTTGGTCAACTGAA +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHKERKH*TTWSTE
Trigger: TTCAGTTGACCAAGTAGTTCAGTGTTTTCTTTCCTT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAACATGGGATAGACATTTaGTTGAAGAGGCAATTTGCT +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEHGIDI*LKRQFA
Trigger: AGCAAATTGCCTCTTCAAGCAAATGTCTATCCCATG...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGTTAAAGAGAATTTCTaGTTTACCTGTGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHVKENF*FTCELL
Trigger: CAGCAGTTCACAGGTAAAGCAGAAATTCTCTTTAAC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAATGTGCTGATTTCCATTaGACTCAAGTTGATCTCACT +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWECADFH*TQVDLT
Trigger: AGTGAGATCAACTTGAGTCCAATGGAAATCAGCACA...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAAAACAGATCAGAATGTaGCCAGCATTGTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRKQIRM*PALSGK
Trigger: TTTGCCTGACAATGCTGGCCACATTCTGATCTGTTT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGTGACTTCCACTTTGTaGAGCAAACAGACAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAVTSTL*SKQTVC
Trigger: GCAGACTGTCTGTTTGCTTCACAAAGTGGAAGTCAC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCTCTGGATAAGCATGTaGGAAAGTCCAGCACGGTTT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVALWISM*ESPARF
Trigger: AAACCGTGCTGGACTTTCTCACATGCTTATCCAGAG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCAAACTGCGCTGACTTaGACTTCCACAGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAQTALT*TSTGFP
Trigger: AGGAAAACCTGTGGAAGTTCAAGTCAGCGCAGTTTG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGAAACCCCTAATGACTaGGCAGAGAGCAGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAETPND*AESSVK
Trigger: TTTGACACTGCTCTCTGCTCAGTCATTAGGGGTTTC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAACCAATATCTTTCCCTaGGTAGTAGAACAAAACAGC +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRTNIFP*VVEQNS
Trigger: GCTGTTTTGTTCTACTACTCAGGGAAAGATATTGGT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAGTAATGTCAAATCCTTaGTTCCAAACTCCACCATCT +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRVMSNP*FQTPPS
Trigger: AGATGGTGGAGTTTGGAAGCAAGGATTTGACATTAC...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAATGTGCTTCTTTATTaGACGTCAAACCAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWENVLLY*TSNQER
Trigger: CCTTTCTTGGTTTGACGTGCAATAAAGAAGCACATT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAGAAGATGGAATAAATTaGACCCATCCCACATTGTCA +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGREDGIN*THPTLS
Trigger: TGACAATGTGGGATGGGTGCAATTTATTCCATCTTC...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTATCCTTGCTTCAAGTTaGAGTTTCCTTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAILASS*SFLGSS
Trigger: GCTGCTGCCAAGGAAACTGCAACTTGAAGCAAGGAT...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTAGTCTTCAACCAACCTaGGTCGTTATGGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVASLQPT*VVMGMR
Trigger: CCTCATTCCCATAACGACCCAGGTTGGTTGAAGACT...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAACGAATGAAAAAGTCTaGTACCATAATCCACAACCA +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWETNEKV*YHNPQP
Trigger: TGGTTGTGGATTATGGTACCAGACTTTTTCATTCGT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGATGCCATTGGAATGACTaGATGATTCATGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRCHWND*MIHERR
Trigger: TCTTCTCTCATGAATCATCCAGTCATTCCAATGGCA...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATCCTAAAATAGGTTTATaGTACCTATGGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHPKIGL*YLWNCF
Trigger: GAAGCAATTCCATAGGTACCATAAACCTATTTTAGG...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATAGTACAACAAAGGCATaGGAAGATCATGATAATGTT +
Preference number: 4 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHSTTKA*EDHDNV
Trigger: AACATTATCATGATCTTCCCATGCCTTTGTTGTACT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAATTGGAATGACTGGATaGTTCATGAGAGAAGAAGTT +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRIGMTG*FMREEV
Trigger: AACTTCTTCTCTCATGAATCATCCAGTCATTCCAAT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCACTTATATTCTGAGTaGCGGGAGGTGAATGCATCA +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAHLYSE*REVNAS
Trigger: TGATGCATTCACCTCCCGGCACTCAGAATATAAGTG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTTGTGAGCCAGCACCTTaGCTGAAATTGCTTTGTGAA +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVACEPAP*LKLLCE
Trigger: TTCACAAAGCAATTTCAGCCAAGGTGCTGGCTCACA...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAACTTATTTGCCATTaGAATGACTGGATGATTCAT +
Preference number: 4 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEELICH*NDWMIH
Trigger: ATGAATCATCCAGTCATTCCAATGGCAAATAAGTTC...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAAAGTTGCAGTTTCCTTaGCAGCAGCACATTTTAATT +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRKLQFP*QQHILI
Trigger: AATTAAAATGTGCTGCTGCCAAGGAAACTGCAACTT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCAACATCTGCACATCTaGATTGTGACTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAQHLHI*IVTSTL
Trigger: CAAAGTGGAAGTCACAATTCAGATGTGCAGATGTTG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTATAAGCCATTGTTGGTaGGTGTCCAAAGGGATCAAT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAISHCW*VSKGIN
Trigger: ATTGATCCCTTTGGACACTCACCAACAATGGCTTAT...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGGCATAAAATATCTGTaGCAGATCCCAGATCCCAAT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAGIKYL*QIPDPN
Trigger: ATTGGGATCTGGGATCTGTCACAGATATTTTATGCC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGACCATACCATGAAAATTaGACATTTACTTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRPYHEN*TFTSWC
Trigger: ACACCATGAAGTAAATGTGCAATTTTCATGGTATGG...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTTTATCCTGGATACCTTaGTCAAGGCCACGATTATCA +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVALSWIP*SRPRLS
Trigger: TGATAATCGTGGCCTTGAGCAAGGTATCCAGGATAA...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR GCA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAACGGTACATGTTTATTaGATGAAATTACCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRTVHVY*MKLPLV
Trigger: TACAAGGGGTAATTTCATGCAATAAACATGTACCGT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGGATGTCCACAATATTaGAAACTTCCACAGACTGTC +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAGCPQY*KLPQTV
Trigger: GACAGTCTGTGGAAGTTTCCAATATTGTGGACATCC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR TCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCCATTGGACTCAAGTTaGTCTCACTTATATTCTGAG +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAPLDSS*SHLYSE
Trigger: CTCAGAATATAAGTGAGATCAACTTGAGTCCAATGG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTATGACAAGAGGTAAATaGAGGTTGAAAGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAMTRGK*RLKATE
Trigger: TTCTGTGGCTTTCAACCTCCATTTACCTCTTGTCAT...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTTGTAAACATAAGGCTTaGCATTACCATCAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVACKHKA*HYHQVR
Trigger: TCTTACCTGATGGTAATGCCAAGCCTTATGTTTACA...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CCA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTAAAGCAGAAACTTGCTaGTTAAAGAGAATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAKAETC*LKRISA
Trigger: AGCAGAAATTCTCTTTAACCAGCAAGTTTCTGCTTT...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 90 bp CGGAGGCTCCCTTCTCCCGGGCTGCGCGACCTCCGCGCTCTCGGATaGGGGTGCGAGTCCCCGCCTTGCTCCGCACCTAGTCTCCGGCGC +
Preference number: 5 (lower is better)
Translates to: RRLPSPGLRDLRALG*GCESPPCSAPSLRR
Trigger: GCGCCGGAGACTAGGTGCGGAGCAAGGCGGGGACTCGCACCCGCATCCGAGAGCGCGGAGGTCGCGCAGCCCGGGAGAAGGGAGCCTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 90 bp CTCCCTTCTCCCGGGCTGCGCGACCTCCGCGCTCTCGGATGCGGGTaGGAGTCCCCGCCTTGCTCCGCACCTAGTCTCCGGCGCCACCAC +
Preference number: 5 (lower is better)
Translates to: LPSPGLRDLRALGCG*ESPPCSAPSLRRHH
Trigger: GTGGTGGCGCCGGAGACTAGGTGCGGAGCAAGGCGGGGACTCGCACCCGCATCCGAGAGCGCGGAGGTCGCGCAGCCCGGGAGAAGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 90 bp CTGCGCGACCTCCGCGCTCTCGGATGCGGGTGCGAGTCCCCGCCTTaGTCCGCACCTAGTCTCCGGCGCCACCACACGCCCTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LRDLRALGCGCESPP*SAPSLRRHHTPLAF
Trigger: GAAGGCCAAGGGCGTGTGGTGGCGCCGGAGACTAGGTGCGGAGCAAGGCGGGGACTCGCACCCGCATCCGAGAGCGCGGAGGTCGCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 90 bp CTCGGGGCCAGGACACTCTCCTCAGCCAAAGGAGACAGCGCACTGTaGACTCTAGGAAGCAGCCGCCGGAGGCTCCCTTCTCCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: LGARTLSSAKGDSAL*TLGSSRRRLPSPGL
Trigger: CAGCCCGGGAGAAGGGAGCCTCCGGCGGCTGCTTCCTAGAGTCCACAGTGCGCTGTCTCCTTTGGCTGAGGAGAGTGTCCTGGCCCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATCGCCACCACACGCCCTaGGCCTTCGCCCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHRHHTP*AFALAC
Trigger: GCAGGCCAGGGCGAAGGCCAAGGGCGTGTGGTGGCG...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 90 bp AGCCCTGTGCCTTTGCTAGAGAACCGACAATCAAACCCTTTTCTGTaGAGGATCAAGGCTGCCTCATTGGAGTGCCCATTGCCCACCTGC +
Preference number: 5 (lower is better)
Translates to: SPVPLLENRQSNPFL*RIKAASLECPLPTC
Trigger: GCAGGTGGGCAATGGGCACTCCAATGAGGCAGCCTTGATCCTCCACAGAAAAGGGTTTGATTGTCGGTTCTCTAGCAAAGGCACAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CCA 90 bp GCGCTAGTGCACGAGCTGTGTAGTAAGAGTGGTTCAGAGCCTGAGTaGGGAGTCAGACAGCTGGAGATCTGGATCCTTGCTCTGCAATTT +
Preference number: 5 (lower is better)
Translates to: ALVHELCSKSGSEPE*GVRQLEIWILALQF
Trigger: AAATTGCAGAGCAAGGATCCAGATCTCCAGCTGTCTGACTCCCCACTCAGGCTCTGAACCACTCTTACTACACAGCTCGTGCACTAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS-3UTR CAA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGGGGCCCCCACAAACTaGATCGCAAGCTCAGCGCCG +
Preference number: 5 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHGAPTN*IASSAP
Trigger: CGGCGCTGAGCTTGCGATCAAGTTTGTGGGGGCCCC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 90 bp AGCCCTGTGCCTTTGCTAGAGAACCGACAATCAAACCCTTTTCTGTaGAGGATCAAGGCTGCCTCATTGGAGTGCCCATTGCCCACCTTT +
Preference number: 5 (lower is better)
Translates to: SPVPLLENRQSNPFL*RIKAASLECPLPTF
Trigger: AAAGGTGGGCAATGGGCACTCCAATGAGGCAGCCTTGATCCTCCACAGAAAAGGGTTTGATTGTCGGTTCTCTAGCAAAGGCACAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261483.5
ENST00000505313.1
ENST00000513921.1
CDS-3UTR CAA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATATCAAGGCTGCCTCATaGGAGTGCCCATTGCCCACC +
Preference number: 5 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHIKAAS*ECPLPT
Trigger: GGTGGGCAATGGGCACTCCAATGAGGCAGCCTTGAT...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 90 bp AGAGGGATAATTGTGAGGGCAGAAGATGTGAGCCAGCACCTTGGCTaGAATTGCTTTGTGAACTTTTCGGACCATCCTCCACAGACTCAC +
Preference number: 5 (lower is better)
Translates to: RGIIVRAEDVSQHLG*NCFVNFSDHPPQTH
Trigger: GTGAGTCTGTGGAGGATGGTCCGAAAAGTTCACAAAGCAATTTCAGCCAAGGTGCTGGCTCACATCTTCTGCCCTCACAATTATCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 90 bp AGGATCAAGGCTGCCTCATTGGAGTGCCCATTGCCCACCTGCAAATaGGCAGAATGCAGTCACACCGCGCAGACAATAAAGCAAATATTT +
Preference number: 5 (lower is better)
Translates to: RIKAASLECPLPTCK*AECSHTAQTIKQIF
Trigger: AAATATTTGCTTTATTGTCTGCGCGGTGTGACTGCATTCTGCTCATTTGCAGGTGGGCAATGGGCACTCCAATGAGGCAGCCTTGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CCA 90 bp ACTGAGAGGGATAATTGTGAGGGCAGAAGATGTGAGCCAGCACCTTaGCTGAAATTGCTTTGTGAACTTTTCGGACCATCCTCCACAGAC +
Preference number: 5 (lower is better)
Translates to: TERDNCEGRRCEPAP*LKLLCELFGPSSTD
Trigger: GTCTGTGGAGGATGGTCCGAAAAGTTCACAAAGCAATTTCAGCCAAGGTGCTGGCTCACATCTTCTGCCCTCACAATTATCCCTCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 90 bp GCAAGAAAGTTAGGCAAATTCATTTCTCCTCAGGTCCATGCTCACTaGCCATTCACCTGCTACCATTCTCTCCTACTTGTACTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ARKLGKFISPQVHAH*PFTCYHSLLLVLSQ
Trigger: CTGGCTCAGTACAAGTAGGAGAGAATGGTAGCAGGTGAATGGGCAGTGAGCATGGACCTGAGGAGAAATGAATTTGCCTAACTTTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS-3UTR CAA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAGACCACAAGGTACCTaGGCTCCGCACTCAGCCTTA +
Preference number: 5 (lower is better)
Translates to: PDKGISKHFGTSTTKAWERPQGT*APHSAL
Trigger: TAAGGCTGAGTGCGGAGCCAAGGTACCTTGTGGTCT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 90 bp GGCAAATTCATTTCTCCTCAGGTCCATGCTCACTGCCCATTCACCTaGTACCATTCTCTCCTACTTGTACTGAGCCAGGTAAGATTATGT +
Preference number: 5 (lower is better)
Translates to: GKFISPQVHAHCPFT*YHSLLLVLSQVRLC
Trigger: ACATAATCTTACCTGGCTCAGTACAAGTAGGAGAGAATGGTAGCAGGTGAATGGGCAGTGAGCATGGACCTGAGGAGAAATGAATTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CCA 90 bp AGAGCAGTGTCAAACGATGTTTGGCATCCTGGATATAGGCCATTGTaGTCATGGGATAGACATTTGCTTGAAGAGGCAATTTGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: RAVSNDVWHPGYRPL*SWDRHLLEEAICSV
Trigger: CACTGAGCAAATTGCCTCTTCAAGCAAATGTCTATCCCATGACCACAATGGCCTATATCCAGGATGCCAAACATCGTTTGACACTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAAGGCACCACAAAGACTaGAAGGGGTTCAGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRRHHKD*KGFSVP
Trigger: TGGGACACTGAACCCCTTCAAGTCTTTGTGGTGCCT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 90 bp GTGTCAAACGATGTTTGGCATCCTGGATATAGGCCATTGTGGTCATaGGATAGACATTTGCTTGAAGAGGCAATTTGCTCAGTGTCATTC +
Preference number: 5 (lower is better)
Translates to: VSNDVWHPGYRPLWS*DRHLLEEAICSVSF
Trigger: GAATGACACTGAGCAAATTGCCTCTTCAAGCAAATGTCTATCCCATGACCACAATGGCCTATATCCAGGATGCCAAACATCGTTTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATGAAGATAAGCCATTGTaGGTGAGTGTCCAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHEDKPL*VSVQRD
Trigger: ATCCCTTTGGACACTCACCAACAATGGCTTATCTTC...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGACATCCGAGCCCTGCTTaGGACATTTCCAGGATGTAT +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRHPSPA*DISRMY
Trigger: ATACATCCTGGAAATGTCCAAAGCAGGGCTCGGATG...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGACCAAACTGCGCTGACTaGAACTTCCACAGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRPNCAD*NFHRFS
Trigger: GGAAAACCTGTGGAAGTTCAAGTCAGCGCAGTTTGG...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAAACAGCCCTGTGCCTTaGCTAGAGAACCGACAATCA +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRNSPVP*LENRQS
Trigger: TGATTGTCGGTTCTCTAGCAAAGGCACAGGGCTGTT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAAATCCTTGCTTCAAGTaGCAGTTTCCTTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PDKGISKHFGTSTTKAWENPCFK*QFPWQQ
Trigger: CTGCTGCCAAGGAAACTGCAACTTGAAGCAAGGATT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 90 bp TTTGGCATCCTGGATATAGGCCATTGTGGTCATGGGATAGACATTTaGTTGAAGAGGCAATTTGCTCAGTGTCATTCTAGGTTGAATCTG +
Preference number: 5 (lower is better)
Translates to: FGILDIGHCGHGIDI*LKRQFAQCHSRLNL
Trigger: CAGATTCAACCTAGAATGACACTGAGCAAATTGCCTCTTCAAGCAAATGTCTATCCCATGACCACAATGGCCTATATCCAGGATGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 90 bp ATTCACAGTAGCGGAAATCATCTCCTAGTGGAGCCAGGAGAACTTTaGTACGAAAAAGCTTTGACTTCTTTCGGTACTGATCTAGTAGCA +
Preference number: 5 (lower is better)
Translates to: IHSSGNHLLVEPGEL*YEKALTSFGTDLVA
Trigger: TGCTACTAGATCAGTACCGAAAGAAGTCAAAGCTTTTTCGTACCAAAGTTCTCCTGGCTCCACTAGGAGATGATTTCCGCTACTGTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATCTTGTATTTGTGAGCTaGTCTCAGGGCGAAATAGTA +
Preference number: 5 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHLVFVS*SQGEIV
Trigger: TACTATTTCGCCCTGAGACAAGCTCACAAATACAAG...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAACGGATGTCCACAATATaGGAAACTTCCACAGACTGT +
Preference number: 5 (lower is better)
Translates to: PDKGISKHFGTSTTKAWERMSTI*ETSTDC
Trigger: ACAGTCTGTGGAAGTTTCCAATATTGTGGACATCCG...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp ATGGGACAGATCCATCGCAAACAACCAGAAGTGGCAAAACCACTGTTATTGCATTCATGGGATAGACATTaGCTTGAAGAGGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: MGQIHRKQPEVAKPLLLHSWDRH*LEEAIC
Trigger: GCAAATTGCCTCTTCAAGCAAATGTCTATCCCATGA...ATGCAATAACAGTGGTTTTGCCACTTCTGGTTGTTTGCGATGGATCTGTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGATCATTGGAGTGCCCATaGCCCACCTTTGACTGTATT +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRSLECP*PTFDCI
Trigger: AATACAGTCAAAGGTGGGCAATGGGCACTCCAATGA...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGATCTCATTCCTGGGATTaGCTTCTGGCAACCCTAACA +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRSHSWD*LLATLT
Trigger: TGTTAGGGTTGCCAGAAGCAAATCCCAGGAATGAGA...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 90 bp TTATTTAGCAAGAAAGTTAGGCAAATTCATTTCTCCTCAGGTCCATaGTCACTGCCCATTCACCTGCTACCATTCTCTCCTACTTGTACT +
Preference number: 5 (lower is better)
Translates to: LFSKKVRQIHFSSGP*SLPIHLLPFSPTCT
Trigger: AGTACAAGTAGGAGAGAATGGTAGCAGGTGAATGGGCAGTGAGCATGGACCTGAGGAGAAATGAATTTGCCTAACTTTCTTGCTAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CCA 90 bp GCCAATGATTCTCAATCCAAATGTGAAAGTCAGGTTCACCTCAACTaGATTCGGAATGTGCTGATTTCCATTGGACTCAAGTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: ANDSQSKCESQVHLN*IRNVLISIGLKLIS
Trigger: TGAGATCAACTTGAGTCCAATGGAAATCAGCACATTCCGAATCCAGTTGAGGTGAACCTGACTTTCACATTTGGATTGAGAATCATTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261483.5
ENST00000503970.2
ENST00000513921.1
CDS-3UTR CAA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAATTAGAAGATAAGCCATaGTTGGTGAGTGTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: PDKGISKHFGTSTTKAWELEDKP*LVSVQR
Trigger: CCTTTGGACACTCACCAACAATGGCTTATCTTCTAA...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAAGTAATGTCAAATCCTaGCTTCCAAACTCCACCATC +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRSNVKS*LPNSTI
Trigger: GATGGTGGAGTTTGGAAGCAAGGATTTGACATTACT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAATGGTACGAAAAAGCTTaGACTTCTTTCGGTACTGAT +
Preference number: 5 (lower is better)
Translates to: PDKGISKHFGTSTTKAWEWYEKA*TSFGTD
Trigger: ATCAGTACCGAAAGAAGTCAAAGCTTTTTCGTACCA...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTAACAGGGAACATCGATaGGCCCTTGTCTCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVANREHR*ALVSLS
Trigger: ACTCAGAGAGACAAGGGCCAATCGATGTTCCCTGTT...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGACAAGTTGCAGTTTCCTaGGCAGCAGCACATTTTAAT +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRQVAVS*AAAHFN
Trigger: ATTAAAATGTGCTGCTGCCAAGGAAACTGCAACTTG...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 90 bp GCTTGTATTATTTCCTTCATGGAGTCACTGTGTGGATTAACCTGTTaGAAATACTATGTAAGTAGCTTCACACTGCCTTGTAGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: ACIISFMESLCGLTC*KYYVSSFTLPCRAE
Trigger: TTCTGCCCTACAAGGCAGTGTGAAGCTACTTACATAGTATTTTCAACAGGTTAATCCACACAGTGACTCCATGAAGGAAATAATACAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS-3UTR CAA 90 bp CCAGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAACAGACTCACTCAAATaGATGACTGAGTCTCTAATA +
Preference number: 5 (lower is better)
Translates to: PDKGISKHFGTSTTKAWETDSLK*MTESLI
Trigger: TATTAGAGACTCAGTCATCAATTTGAGTGAGTCTGT...TTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAACTCCACCATCTGGATaGTCAAAAGAAATTAGACTG +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRTPPSG*SKEIRL
Trigger: CAGTCTAATTTCTTTTGACAATCCAGATGGTGGAGT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGGAGCCAGGAGAACTTaGGTACGAAAAAGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAGARRT*VRKSFD
Trigger: GTCAAAGCTTTTTCGTACCAAAGTTCTCCTGGCTCC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGTTATCCTGGATACCTaGCTCAAGGCCACGATTATC +
Preference number: 5 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAVILDT*LKATII
Trigger: GATAATCGTGGCCTTGAGCAAGGTATCCAGGATAAC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGAATAAGGGTGGATGGATaGCACTTTTCCACTTATTTC +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRIRVDG*HFSTYF
Trigger: GAAATAAGTGGAAAAGTGCAATCCATCCACCCTTAT...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 90 bp TCATTGCAATCTCACGGTTATATACTTTTCGGATGTCCACAATATTaGAAACTTCCACAGACTGTCCTTCTATTCCCTGTATGTGGTATA +
Preference number: 5 (lower is better)
Translates to: SLQSHGYILFGCPQY*KLPQTVLLFPVCGI
Trigger: TATACCACATACAGGGAATAGAAGGACAGTCTGTGGAAGTTTCCAATATTGTGGACATCCGAAAAGTATATAACCGTGAGATTGCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGCACCTTGGCTGAAATaGCTTTGTGAACTTTTCGGA +
Preference number: 5 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAAPWLK*LCELFG
Trigger: TCCGAAAAGTTCACAAAGCAATTTCAGCCAAGGTGC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGGGATAGACATTTGCTaGAAGAGGCAATTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAGIDIC*KRQFAQ
Trigger: CTGAGCAAATTGCCTCTTCAAGCAAATGTCTATCCC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGCCACGATTATCATCTaGCATGAGTCTTCGATCCAT +
Preference number: 5 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAATIII*HESSIH
Trigger: ATGGATCGAAGACTCATGCAAGATGATAATCGTGGC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGCCCATTGCCCACCTTaGACTGTATTGTTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAAHCPP*TVLFSN
Trigger: ATTTGAGAACAATACAGTCAAAGGTGGGCAATGGGC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp AGACAAAGGAATATCAAAACACTTCGGCACAAGTACAACAAAGGCATGGGAAGATACGGTACATGTTTATaGCATGAAATTACCCCTTGT +
Preference number: 5 (lower is better)
Translates to: RQRNIKTLRHKYNKGMGRYGTCL*HEITPC
Trigger: ACAAGGGGTAATTTCATGCAATAAACATGTACCGTA...TCTTCCCATGCCTTTGTTGTACTTGTGCCGAAGTGTTTTGATATTCCTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTGATAGCATCATGATGTaGAAACAGTCCCAAATTCCT +
Preference number: 5 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVADSIMM*KQSQIP
Trigger: AGGAATTTGGGACTGTTTCAACATCATGATGCTATC...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS-3UTR CAA 90 bp GTACATACTCAAAGACTCCTTTCTATGCTAAAATTGCATAGTCTAAATGTCGCTCATTTTACAAAATCCTaGCTTCAAGTTGCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: VHTQRLLSMLKLHSLNVAHFTKS*LQVAVS
Trigger: GGAAACTGCAACTTGAAGCAAGGATTTTGTAAAATG...AGCGACATTTAGACTATGCAATTTTAGCATAGAAAGGAGTCTTTGAGTATGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 72 bp CCCGGGCTGCGCGACCTCCGCGCTCTCGGATGCGGGTaGGAGTCCCCGCCTTGCTCCGCACCTAGTCTCCGG +
Preference number: 6 (lower is better)
Translates to: PGLRDLRALGCG*ESPPCSAPSLR
Trigger: CCGGAGACTAGGTGCGGAGCAAGGCGGGGACTCGCACCCGCATCCGAGAGCGCGGAGGTCGCGCAGCCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 72 bp CTCCGCGCTCTCGGATGCGGGTGCGAGTCCCCGCCTTaGTCCGCACCTAGTCTCCGGCGCCACCACACGCCC +
Preference number: 6 (lower is better)
Translates to: LRALGCGCESPP*SAPSLRRHHTP
Trigger: GGGCGTGTGGTGGCGCCGGAGACTAGGTGCGGAGCAAGGCGGGGACTCGCACCCGCATCCGAGAGCGCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 72 bp GGCCCTGAGGGAAGGAGCCCTCGCGGCGCGGGTTCCTaGGGTAGTCTAAGTGACCCCGGTCCAGCATCAGGT +
Preference number: 6 (lower is better)
Translates to: GPEGRSPRGAGS*GSLSDPGPASG
Trigger: ACCTGATGCTGGACCGGGGTCACTTAGACTACCCCAGGAACCCGCGCCGCGAGGGCTCCTTCCCTCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 72 bp AGGACACTCTCCTCAGCCAAAGGAGACAGCGCACTGTaGACTCTAGGAAGCAGCCGCCGGAGGCTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: RTLSSAKGDSAL*TLGSSRRRLPS
Trigger: AGAAGGGAGCCTCCGGCGGCTGCTTCCTAGAGTCCACAGTGCGCTGTCTCCTTTGGCTGAGGAGAGTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 72 bp GCTGCCTCATTGGAGTGCCCATTGCCCACCTGCAAATaGGCAGAATGCAGTCACACCGCGCAGACAATAAAG +
Preference number: 6 (lower is better)
Translates to: AASLECPLPTCK*AECSHTAQTIK
Trigger: CTTTATTGTCTGCGCGGTGTGACTGCATTCTGCTCATTTGCAGGTGGGCAATGGGCACTCCAATGAGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CCA 72 bp AGCCCTGCTTTGGACATTTCCAGGATGTATTGTTTCTaGGGGGACTCCCCAGGGACAACCAAATCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SPALDISRMYCF*GDSPGTTKSAS
Trigger: GGAGGCAGATTTGGTTGTCCCTGGGGAGTCCCCCCAGAAACAATACATCCTGGAAATGTCCAAAGCAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 72 bp ACCACACAGAAGATCGCACTGCCGAACACGGTGAACTaGCGGCTTAACTTCATTTTCCTCGATAGACTCGGG +
Preference number: 6 (lower is better)
Translates to: TTQKIALPNTVN*RLNFIFLDRLG
Trigger: CCCGAGTCTATCGAGGAAAATGAAGTTAAGCCGCCAGTTCACCGTGTTCGGCAGTGCGATCTTCTGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 72 bp CCAAACTGCGCTGACTTGAACTTCCACAGGTTTTCCTaGAGCAGAGAACACTTGCACTGTCGGGGAACTCAC +
Preference number: 6 (lower is better)
Translates to: PNCADLNFHRFS*SREHLHCRGTH
Trigger: GTGAGTTCCCCGACAGTGCAAGTGTTCTCTGCTTCAGGAAAACCTGTGGAAGTTCAAGTCAGCGCAGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261483.5
ENST00000502261.5
ENST00000508043.1
CDS GCA 72 bp GGGGAGTCAGACAGCTGGAGATCTGGATCCTTGCTCTaGAATTTACTAGCTGTGGGTTTCAGCAAAACCAGG +
Preference number: 6 (lower is better)
Translates to: GESDSWRSGSLL*NLLAVGFSKTR
Trigger: CCTGGTTTTGCTGAAACCCACAGCTAGTAAATTGCAGAGCAAGGATCCAGATCTCCAGCTGTCTGACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CAA 72 bp GAGGGCAGAAGATGTGAGCCAGCACCTTGGCTGAAATaGCTTTGTGAACTTTTCGGACCATCCTCCACAGAC +
Preference number: 6 (lower is better)
Translates to: EGRRCEPAPWLK*LCELFGPSSTD
Trigger: GTCTGTGGAGGATGGTCCGAAAAGTTCACAAAGCAATTTCAGCCAAGGTGCTGGCTCACATCTTCTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CAA 90 bp GTTCAGAGCCTGAGTGGGGAGTCAGACAGCTGGAGATCTGGATCCTaGCTCTGCAATTTACTAGCTGTGGGTTTCAGCAAAACCAGGTTT +
Preference number: 6 (lower is better)
Translates to: VQSLSGESDSWRSGS*LCNLLAVGFSKTRF
Trigger: AAACCTGGTTTTGCTGAAACCCACAGCTAGTAAATTGCAGAGCAAGGATCCAGATCTCCAGCTGTCTGACTCCCCACTCAGGCTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS GCA 72 bp ATTTCTCCTCAGGTCCATGCTCACTGCCCATTCACCTaGTACCATTCTCTCCTACTTGTACTGAGCCAGGTA +
Preference number: 6 (lower is better)
Translates to: ISPQVHAHCPFT*YHSLLLVLSQV
Trigger: TACCTGGCTCAGTACAAGTAGGAGAGAATGGTAGCAGGTGAATGGGCAGTGAGCATGGACCTGAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CCA 72 bp CCTTTGCTAGAGAACCGACAATCAAACCCTTTTCTGTaGAGGATCAAGGCTGCCTCATTGGAGTGCCCATTG +
Preference number: 6 (lower is better)
Translates to: PLLENRQSNPFL*RIKAASLECPL
Trigger: CAATGGGCACTCCAATGAGGCAGCCTTGATCCTCCACAGAAAAGGGTTTGATTGTCGGTTCTCTAGCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261483.5
ENST00000503970.2
ENST00000505313.1
ENST00000513921.1
CDS TCA 72 bp AAATCACCACACAGAAGATCGCACTGCCGAACACGGTaGACTGGCGGCTTAACTTCATTTTCCTCGATAGAC +
Preference number: 6 (lower is better)
Translates to: KSPHRRSHCRTR*TGGLTSFSSID
Trigger: GTCTATCGAGGAAAATGAAGTTAAGCCGCCAGTTCACCGTGTTCGGCAGTGCGATCTTCTGTGTGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 72 bp ATTGTGAGGGCAGAAGATGTGAGCCAGCACCTTGGCTaGAATTGCTTTGTGAACTTTTCGGACCATCCTCCA +
Preference number: 6 (lower is better)
Translates to: IVRAEDVSQHLG*NCFVNFSDHPP
Trigger: TGGAGGATGGTCCGAAAAGTTCACAAAGCAATTTCAGCCAAGGTGCTGGCTCACATCTTCTGCCCTCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CAA 90 bp GATAATTGTGAGGGCAGAAGATGTGAGCCAGCACCTTGGCTGAAATaGCTTTGTGAACTTTTCGGACCATCCTCCACAGACTCACTCAAA +
Preference number: 6 (lower is better)
Translates to: DNCEGRRCEPAPWLK*LCELFGPSSTDSLK
Trigger: TTTGAGTGAGTCTGTGGAGGATGGTCCGAAAAGTTCACAAAGCAATTTCAGCCAAGGTGCTGGCTCACATCTTCTGCCCTCACAATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CAA 90 bp CACAACCACCCAGTCTTTTGCAGTTCCTGTGATAGCATCATGATGTaGAAACAGTCCCAAATTCCTTCTGGCTTCTGTCAGTGCCGTGTA +
Preference number: 6 (lower is better)
Translates to: HNHPVFCSSCDSIMM*KQSQIPSGFCQCRV
Trigger: TACACGGCACTGACAGAAGCCAGAAGGAATTTGGGACTGTTTCAACATCATGATGCTATCACAGGAACTGCAAAAGACTGGGTGGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 72 bp GATAATTGTGAGGGCAGAAGATGTGAGCCAGCACCTTaGCTGAAATTGCTTTGTGAACTTTTCGGACCATCC +
Preference number: 6 (lower is better)
Translates to: DNCEGRRCEPAP*LKLLCELFGPS
Trigger: GGATGGTCCGAAAAGTTCACAAAGCAATTTCAGCCAAGGTGCTGGCTCACATCTTCTGCCCTCACAATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CAA 90 bp AATCATCTCCTAGTGGAGCCAGGAGAACTTTGGTACGAAAAAGCTTaGACTTCTTTCGGTACTGATCTAGTAGCATCCGAGCCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: NHLLVEPGELWYEKA*TSFGTDLVASEPCF
Trigger: AAAGCAGGGCTCGGATGCTACTAGATCAGTACCGAAAGAAGTCAAAGCTTTTTCGTACCAAAGTTCTCCTGGCTCCACTAGGAGATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 72 bp CAAGGCAAAGATGACTGTAATGGAGAGAATTCACCTTaGAGCTCAAGGGTAGGTGAGGAGAACTTATTTGCC +
Preference number: 6 (lower is better)
Translates to: QGKDDCNGENSP*SSRVGEENLFA
Trigger: GGCAAATAAGTTCTCCTCACCTACCCTTGAGCTGCAAGGTGAATTCTCTCCATTACAGTCATCTTTGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261483.5
ENST00000505313.1
ENST00000513921.1
CDS CAA 72 bp CTAGTGGAGCCAGGAGAACTTTGGTACGAAAAAGCTTaGACTTCTTTCGGTACTGATCTAGTAGCATCCGAG +
Preference number: 6 (lower is better)
Translates to: LVEPGELWYEKA*TSFGTDLVASE
Trigger: CTCGGATGCTACTAGATCAGTACCGAAAGAAGTCAAAGCTTTTTCGTACCAAAGTTCTCCTGGCTCCACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CAA 90 bp GGCATCCTGGATATAGGCCATTGTGGTCATGGGATAGACATTTGCTaGAAGAGGCAATTTGCTCAGTGTCATTCTAGGTTGAATCTGGTA +
Preference number: 6 (lower is better)
Translates to: GILDIGHCGHGIDIC*KRQFAQCHSRLNLV
Trigger: TACCAGATTCAACCTAGAATGACACTGAGCAAATTGCCTCTTCAAGCAAATGTCTATCCCATGACCACAATGGCCTATATCCAGGATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 72 bp CAGATTAGCATTGCACAGAAGGGTGCTAGCAAAAAGTaGCTAGCATCGTGCCAGAAGCTAACATTAGATGTC +
Preference number: 6 (lower is better)
Translates to: QISIAQKGASKK*LASCQKLTLDV
Trigger: GACATCTAATGTTAGCTTCTGGCACGATGCTAGTCACTTTTTGCTAGCACCCTTCTGTGCAATGCTAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513921.1
CDS GCA 72 bp CTGGATATAGGCCATTGTGGTCATGGGATAGACATTTaGTTGAAGAGGCAATTTGCTCAGTGTCATTCTAGG +
Preference number: 6 (lower is better)
Translates to: LDIGHCGHGIDI*LKRQFAQCHSR
Trigger: CCTAGAATGACACTGAGCAAATTGCCTCTTCAAGCAAATGTCTATCCCATGACCACAATGGCCTATATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 72 bp GCTGCCAGAATCTCCACCACTGATTTGATTTTAATGTaGCTGAACAGTTTAAAGCTGTCCTCACCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: AARISTTDLILM*LNSLKLSSPQS
Trigger: ACTCTGAGGTGAGGACAGCTTTAAACTGTTCAGGCACATTAAAATCAAATCAGTGGTGGAGATTCTGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CAA 72 bp CCAGTCTTTTGCAGTTCCTGTGATAGCATCATGATGTaGAAACAGTCCCAAATTCCTTCTGGCTTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: PVFCSSCDSIMM*KQSQIPSGFCQ
Trigger: CTGACAGAAGCCAGAAGGAATTTGGGACTGTTTCAACATCATGATGCTATCACAGGAACTGCAAAAGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 72 bp ACTTTGGTACGAAAAAGCTTTGACTTCTTTCGGTACTaGTCTAGTAGCATCCGAGCCCTGCTTTGGACATTT +
Preference number: 6 (lower is better)
Translates to: TLVRKSFDFFRY*SSSIRALLWTF
Trigger: AAATGTCCAAAGCAGGGCTCGGATGCTACTAGATCAGTACCGAAAGAAGTCAAAGCTTTTTCGTACCAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS GCA 72 bp GCAGGAAAACAGATACCTTCAAGCAGTCACACTGTATaGTCTAGGAGAGTAAACAGATTTTGGAAGAACTGC +
Preference number: 6 (lower is better)
Translates to: AGKQIPSSSHTV*SRRVNRFWKNC
Trigger: GCAGTTCTTCCAAAATCTGTTTACTCTCCTAGAGCATACAGTGTGACTGCTTGAAGGTATCTGTTTTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CCA 72 bp TCACCTCAACTGGATTCGGAATGTGCTGATTTCCATTaGACTCAAGTTGATCTCACTTATATTCTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: SPQLDSECADFH*TQVDLTYILSA
Trigger: GGCACTCAGAATATAAGTGAGATCAACTTGAGTCCAATGGAAATCAGCACATTCCGAATCCAGTTGAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261483.5
ENST00000503970.2
ENST00000513921.1
CDS CCA 72 bp TCTCAATCCAAATGTGAAAGTCAGGTTCACCTCAACTaGATTCGGAATGTGCTGATTTCCATTGGACTCAAG +
Preference number: 6 (lower is better)
Translates to: SQSKCESQVHLN*IRNVLISIGLK
Trigger: CTTGAGTCCAATGGAAATCAGCACATTCCGAATCCAGTTGAGGTGAACCTGACTTTCACATTTGGATTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261483.5
ENST00000503970.2
ENST00000513921.1
CDS CAA 72 bp ATCCTGGATACCTTGCTCAAGGCCACGATTATCATCTaGCATGAGTCTTCGATCCATGATAACTTCAATCTG +
Preference number: 6 (lower is better)
Translates to: ILDTLLKATIII*HESSIHDNFNL
Trigger: CAGATTGAAGTTATCATGGATCGAAGACTCATGCAAGATGATAATCGTGGCCTTGAGCAAGGTATCCAGGAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 72 bp GGTGAGGAGAACTTATTTGCCATTGGAATGACTGGATaGTTCATGAGAGAAGAAGTTATGTGGCTAAGGAGA +
Preference number: 6 (lower is better)
Translates to: GEENLFAIGMTG*FMREEVMWLRR
Trigger: TCTCCTTAGCCACATAACTTCTTCTCTCATGAATCATCCAGTCATTCCAATGGCAAATAAGTTCTCCTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261483.5
ENST00000505313.1
ENST00000513921.1
CDS GCA 72 bp ACTCATGGGTCCATCCTTACATATCACTTGATAGCATaGATGGCTAAAATTCCTGCAACACATTTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: THGSILTYHLIA*MAKIPATHLLL
Trigger: CAAGAGCAAATGTGTTGCAGGAATTTTAGCCATGCATGCTATCAAGTGATATGTAAGGATGGACCCATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CAA 90 bp AATCTTGTTATCCTGGATACCTTGCTCAAGGCCACGATTATCATCTaGCATGAGTCTTCGATCCATGATAACTTCAATCTGACCACTATT +
Preference number: 6 (lower is better)
Translates to: NLVILDTLLKATIII*HESSIHDNFNLTTI
Trigger: AATAGTGGTCAGATTGAAGTTATCATGGATCGAAGACTCATGCAAGATGATAATCGTGGCCTTGAGCAAGGTATCCAGGATAACAAGATT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS TCA 72 bp TGCCTTCAAATGTGCATAAATTCCAGCTATGCCTTTTaGTGTCAACAAGGAAAGGAGGCTGAAGTTTTGAGA +
Preference number: 6 (lower is better)
Translates to: CLQMCINSSYAF*CQQGKEAEVLR
Trigger: TCTCAAAACTTCAGCCTCCTTTCCTTGTTGACATCAAAAGGCATAGCTGGAATTTATGCACATTTGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505313.1
CDS CAA 72 bp ATCTCACGGTTATATACTTTTCGGATGTCCACAATATaGGAAACTTCCACAGACTGTCCTTCTATTCCCTGT +
Preference number: 6 (lower is better)
Translates to: ISRLYTFRMSTI*ETSTDCPSIPC
Trigger: ACAGGGAATAGAAGGACAGTCTGTGGAAGTTTCCAATATTGTGGACATCCGAAAAGTATATAACCGTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CAA 90 bp TTCATTGCAATCTCACGGTTATATACTTTTCGGATGTCCACAATATaGGAAACTTCCACAGACTGTCCTTCTATTCCCTGTATGTGGTAT +
Preference number: 6 (lower is better)
Translates to: FIAISRLYTFRMSTI*ETSTDCPSIPCMWY
Trigger: ATACCACATACAGGGAATAGAAGGACAGTCTGTGGAAGTTTCCAATATTGTGGACATCCGAAAAGTATATAACCGTGAGATTGCAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CCA 72 bp AGTATTCGAAATAGATTAGCTGTAATCTTGTTATCCTaGATACCTTGCTCAAGGCCACGATTATCATCTTGC +
Preference number: 6 (lower is better)
Translates to: SIRNRLAVILLS*IPCSRPRLSSC
Trigger: GCAAGATGATAATCGTGGCCTTGAGCAAGGTATCCAGGATAACAAGATTACAGCTAATCTATTTCGAATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CAA 72 bp TCCATTTTAACTCATGGGTCCATCCTTACATATCACTaGATAGCATGCATGGCTAAAATTCCTGCAACACAT +
Preference number: 6 (lower is better)
Translates to: SILTHGSILTYH*IACMAKIPATH
Trigger: ATGTGTTGCAGGAATTTTAGCCATGCATGCTATCAAGTGATATGTAAGGATGGACCCATGAGTTAAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CAA 72 bp GTCCCATTCATTAGATTCATAAGTAATGTCAAATCCTaGCTTCCAAACTCCACCATCTGGATTGTCAAAAGA +
Preference number: 6 (lower is better)
Translates to: VPFIRFISNVKS*LPNSTIWIVKR
Trigger: TCTTTTGACAATCCAGATGGTGGAGTTTGGAAGCAAGGATTTGACATTACTTATGAATCTAATGAATGGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CAA 90 bp CATCAGTTGAATAAACTGCACCTGAACTTAGTCCTTATCTGGTCATaGAATGACATACCATCTAACTTAAAAGTCACACATGCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: HQLNKLHLNLVLIWS*NDIPSNLKVTHASL
Trigger: TAAAGAAGCATGTGTGACTTTTAAGTTAGATGGTATGTCATTCAATGACCAGATAAGGACTAAGTTCAGGTGCAGTTTATTCAACTGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CCA 72 bp CAGTTGAATAAACTGCACCTGAACTTAGTCCTTATCTaGTCATTGAATGACATACCATCTAACTTAAAAGTC +
Preference number: 6 (lower is better)
Translates to: QLNKLHLNLVLI*SLNDIPSNLKV
Trigger: GACTTTTAAGTTAGATGGTATGTCATTCAATGACCAGATAAGGACTAAGTTCAGGTGCAGTTTATTCAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503970.2
CDS CCA 72 bp TCTCAACCTATCACAAAACTCTCAAAGTACAAGGATTaGGCTGTACATAGATTATATGTTGTGCATCATCAA +
Preference number: 6 (lower is better)
Translates to: SQPITKLSKYKD*AVHRLYVVHHQ
Trigger: TTGATGATGCACAACATATAATCTATGTACAGCCCAATCCTTGTACTTTGAGAGTTTTGTGATAGGTTGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513921.1
CDS CAA 72 bp TTTTCTAGTAGTATTCGAAATAGATTAGCTGTAATCTaGTTATCCTGGATACCTTGCTCAAGGCCACGATTA +
Preference number: 6 (lower is better)
Translates to: FSSSIRNRLAVI*LSWIPCSRPRL
Trigger: TAATCGTGGCCTTGAGCAAGGTATCCAGGATAACAAGATTACAGCTAATCTATTTCGAATACTACTAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261483.5
CDS CAA 72 bp AATAAACTGCACCTGAACTTAGTCCTTATCTGGTCATaGAATGACATACCATCTAACTTAAAAGTCACACAT +
Preference number: 6 (lower is better)
Translates to: NKLHLNLVLIWS*NDIPSNLKVTH
Trigger: ATGTGTGACTTTTAAGTTAGATGGTATGTCATTCAATGACCAGATAAGGACTAAGTTCAGGTGCAGTTTATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503970.2