RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAN1C1 (Homo sapiens)

Ensembl gene IDs: ENSG00000117643

Ensembl transcript IDs: ENST00000263979.7, ENST00000374329.1, ENST00000374332.9, ENST00000473891.1, ENST00000475314.5, ENST00000487493.1, ENST00000496532.5, ENST00000611903.4

Found 600 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAGGGCGGCGGCAGGAGATGGGGTCAGTGTCTGCCCCAGGCTCTaGCGGAGCTGTCTGAGTGGTTCACCGGGAGTGGGTGGGCCTCGG +
Preference number: 1 (lower is better)
Translates to: PRAAAGDGVSVCPRL*RSCLSGSPGVGGPR
Trigger: CCGAGGCCCACCCACTCCCGGTGAACCACTCAGACAGCTCCGGCAGAGCCTGGGGCAGACACTGACCCCATCTCCTGCCGCCGCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CCA 90 bp AAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGGCAGGAGATaGGGTCAGTGTCTGCCCCAGGCTCTGCCGGAGCTGTCTGAGTGG +
Preference number: 1 (lower is better)
Translates to: KGKASLRRPQGGGRR*GQCLPQALPELSEW
Trigger: CCACTCAGACAGCTCCGGCAGAGCCTGGGGCAGACACTGACCCCATCTCCTGCCGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR TCA 90 bp GATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTaGAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGGCAGG +
Preference number: 1 (lower is better)
Translates to: DGAFVPNPFENSLKS*KGKASLRRPQGGGR
Trigger: CCTGCCGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR TCA 90 bp CCCAGTGTCTGGTCCGTTGCAGGCACTCACCAAGCATCTGCTGAATaGTGGAACAGACGGACACTCAACTGGGGTGGCCAGGAGACGGCA +
Preference number: 1 (lower is better)
Translates to: PSVWSVAGTHQASAE*WNRRTLNWGGQETA
Trigger: TGCCGTCTCCTGGCCACCCCAGTTGAGTGTCCGTCTGTTCCATCATTCAGCAGATGCTTGGTGAGTGCCTGCAACGGACCAGACACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR TCA 90 bp CGGAGCTGTCTGAGTGGTTCACCGGGAGTGGGTGGGCCTCGGTGTTaGACACCCAGTCTTCCAGGGAGAGCAAGTCATCTTCAGAGAACA +
Preference number: 1 (lower is better)
Translates to: RSCLSGSPGVGGPRC*TPSLPGRASHLQRT
Trigger: TGTTCTCTGAAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACCGAGGCCCACCCACTCCCGGTGAACCACTCAGACAGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR TCA 90 bp GGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTaGGTGGGCTTCATAGAAATTCTCTGTAGAAAGGAATGTGTGGGC +
Preference number: 1 (lower is better)
Translates to: GRICKPPVLWPWNGK*VGFIEILCRKECVG
Trigger: GCCCACACATTCCTTTCTACAGAGAATTTCTATGAAGCCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR TCA 90 bp GGCTACTCCCCAGCAGCTCTGCTTAAGAAGATTCTGGGAATGTCTTaGGTCTCCAGAACAAGGAACAAGCACTTCCTGTGCCCAGGGAAC +
Preference number: 1 (lower is better)
Translates to: GYSPAALLKKILGMS*VSRTRNKHFLCPGN
Trigger: GTTCCCTGGGCACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCTTAAGCAGAGCTGCTGGGGAGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR GCA 90 bp GTCAAGAGCATGGTACTTGCTACAGGGGCTACTCCCCAGCAGCTCTaGTTAAGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGA +
Preference number: 1 (lower is better)
Translates to: VKSMVLATGATPQQL*LRRFWECLESPEQG
Trigger: TCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCTTAAGCAGAGCTGCTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CCA 90 bp CTTGCTACAGGGGCTACTCCCCAGCAGCTCTGCTTAAGAAGATTCTaGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGT +
Preference number: 1 (lower is better)
Translates to: LATGATPQQLCLRRF*ECLESPEQGTSTSC
Trigger: ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCTTAAGCAGAGCTGCTGGGGAGTAGCCCCTGTAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CCA 90 bp CCCAATCTAAACCTGAGTATAAATAAACAACTGCATCTGAAGGGCTaGCCTCATGCTTCTCGAATATATCAGGACCGATTTCAGGGGAGG +
Preference number: 1 (lower is better)
Translates to: PNLNLSINKQLHLKG*PHASRIYQDRFQGR
Trigger: CCTCCCCTGAAATCGGTCCTGATATATTCGAGAAGCATGAGGCCAGCCCTTCAGATGCAGTTGTTTATTTATACTCAGGTTTAGATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR GCA 90 bp GTCCTCAGCTGTCTATCTATCTCCTTTGTAGCATTTCCTATGACCTaGAGTCACTTCACTTACTTGTCAGTTTCCCTTACCATCGCTTTC +
Preference number: 1 (lower is better)
Translates to: VLSCLSISFVAFPMT*SHFTYLSVSLTIAF
Trigger: GAAAGCGATGGTAAGGGAAACTGACAAGTAAGTGAAGTGACTGCAGGTCATAGGAAATGCTACAAAGGAGATAGATAGACAGCTGAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CCA 90 bp CTTCTCGAATATATCAGGACCGATTTCAGGGGAGGTAATAGAAGTTaGAATCGTTTACTAAATTATACCTTAAATCAACTGCTGGCTGAT +
Preference number: 1 (lower is better)
Translates to: LLEYIRTDFRGGNRS*NRLLNYTLNQLLAD
Trigger: ATCAGCCAGCAGTTGATTTAAGGTATAATTTAGTAAACGATTCCAACTTCTATTACCTCCCCTGAAATCGGTCCTGATATATTCGAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CCA 90 bp CGGTGTCCCTGGCCTCTAGCCCAGTGTCTGGTCCGTTGCAGGCACTCACCAAGCCCGGAGCTGTCTGAGTaGTTCACCGGGAGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: RCPWPLAQCLVRCRHSPSPELSE*FTGSGW
Trigger: CCACCCACTCCCGGTGAACCACTCAGACAGCTCCGG...GCTTGGTGAGTGCCTGCAACGGACCAGACACTGGGCTAGAGGCCAGGGACACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR TCA 90 bp CTTGCTCTGCACAACAGCCCCAGTGTTTCAGGCCCCCTCCCAGGGAGGGCATCATCTGCCGGAGCTGTCTaGGTGGTTCACCGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LALHNSPSVSGPLPGRASSAGAV*VVHREW
Trigger: CCACTCCCGGTGAACCACTCAGACAGCTCCGGCAGA...TGATGCCCTCCCTGGGAGGGGGCCTGAAACACTGGGGCTGTTGTGCAGAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CCA 90 bp CTTGCTCTGCACAACAGCCCCAGTGTTTCAGGCCCCCTCCCAGGGAGGGCATCAGGGGTCTGCCCGAGATaGGGCCTTCGTTCCCAATCC +
Preference number: 2 (lower is better)
Translates to: LALHNSPSVSGPLPGRASGVCPR*GLRSQS
Trigger: GGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCC...TGATGCCCTCCCTGGGAGGGGGCCTGAAACACTGGGGCTGTTGTGCAGAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR GCA 90 bp GCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTACAGGGGCTACTCCCCAGGTCTGCCCCAGGCTCTaGCGGAGCTGTCTGAGTGGT +
Preference number: 2 (lower is better)
Translates to: ALMLPVKSMVLATGATPQVCPRL*RSCLSG
Trigger: ACCACTCAGACAGCTCCGGCAGAGCCTGGGGCAGAC...CTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CAA 90 bp CCGGAGCTGTCTGAGTGGTTCACCGGGAGTGGGTGGGCCTCGGTGTaGAACACCCAGTCTTCCAGGGAGAGCAAGTCATCTTCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: PELSEWFTGSGWASV*NTQSSRESKSSSEN
Trigger: GTTCTCTGAAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACCGAGGCCCACCCACTCCCGGTGAACCACTCAGACAGCTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CCA 90 bp GTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTGTCCGACACATCTGCTaGGGGTCTGCCCGAGATGGG +
Preference number: 2 (lower is better)
Translates to: VGHGSHALMLPVKSMVLAVRHIC*GSARDG
Trigger: CCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGAC...AGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR TCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCGGTGGGCCTCGGTGTTaGACACCCAGTCTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGGGPRC*TPSLPG
Trigger: CCCTGGAAGACTGGGTGTTCAACACCGAGGCCCACC...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAGGGGTCTGCCCGAGATaGGGCCTTCGTTCCCAATCC +
Preference number: 2 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAGVCPR*GLRSQS
Trigger: GGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCC...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR-3UTR CCA 90 bp TTCTCCCGTGATTTCCGCTGTGTTGACAAGCTGCAAATGTGCCAGGAAAGGACTGGCGGCGGCAGGAGATaGGGTCAGTGTCTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: FSRDFRCVDKLQMCQERTGGGRR*GQCLPQ
Trigger: CTGGGGCAGACACTGACCCCATCTCCTGCCGCCGCC...AGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CCA 90 bp AGAGAGGGGAGGTACCTGCCTAAGTTCACACAGCAGGGATTTAAAGCCGGGTCAGTGGTTCACCGGGAGTaGGTGGGCCTCGGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: REGRYLPKFTQQGFKAGSVVHRE*VGLGVE
Trigger: TTCAACACCGAGGCCCACCCACTCCCGGTGAACCAC...TGACCCGGCTTTAAATCCCTGCTGTGTGAACTTAGGCAGGTACCTCCCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR GCA 90 bp CTTGCTCTGCACAACAGCCCCAGTGTTTCAGGCCCCCTCCCAGGGAGGGCATCACAGAGGAAAAGAAGTTaGTTGTCCGACACATCTGCT +
Preference number: 2 (lower is better)
Translates to: LALHNSPSVSGPLPGRASQRKRS*LSDTSA
Trigger: AGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTG...TGATGCCCTCCCTGGGAGGGGGCCTGAAACACTGGGGCTGTTGTGCAGAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CCA 90 bp GCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTACAGGGGCTACTCCCCAGCCTTTGGCCCTGGAATaGCAAGTGAGTGGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: ALMLPVKSMVLATGATPQPLALE*QVSGLH
Trigger: ATGAAGCCCACTCACTTGCCATTCCAGGGCCAAAGG...CTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CAA 90 bp CAGTGTGGCCATGGCCCTGGCCTGACATCGCTGAGTCTCCAAGTCTaGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTG +
Preference number: 2 (lower is better)
Translates to: QCGHGPGLTSLSLQV*SPHRGKEVACPTHL
Trigger: CAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAGACTTGGAGACTCAGCGATGTCAGGCCAGGGCCATGGCCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR-3UTR CCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAGTAGAAAGGAATGTGTaGGCCAGTGTGGCCATGGCC +
Preference number: 2 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAVERNV*ASVAMA
Trigger: GGCCATGGCCACACTGGCCCACACATTCCTTTCTAC...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR-3UTR TCA 90 bp GTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTTTCAGTGTTAGGACCTaGGCTCCTTGCTCTGCACAA +
Preference number: 2 (lower is better)
Translates to: VGHGSHALMLPVKSMVLAFSVRT*APCSAQ
Trigger: TTGTGCAGAGCAAGGAGCTCAGGTCCTAACACTGAA...AGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR GCA 90 bp GCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTACAGGGGCTACTCCCCAGGCTAGAAAGAAGCTCTaGTGCTTGTTGTCGTGGTTG +
Preference number: 2 (lower is better)
Translates to: ALMLPVKSMVLATGATPQARKKL*CLLSWL
Trigger: CAACCACGACAACAAGCAGCAGAGCTTCTTTCTAGC...CTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR TCA 90 bp TTTGAGCACAGGTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCAAACAGTCTCAAATCCTaGAAAGGCAAGGCATCCCTG +
Preference number: 2 (lower is better)
Translates to: FEHRWVMGVTLSCCLSRANSLKS*KGKASL
Trigger: CAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGTT...TGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCACCTGTGCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR TCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACGTTCCCAATCCCTTTaGGAACAGTCTCAAATCCTG +
Preference number: 2 (lower is better)
Translates to: SNTRGGYANLRSFGPGMARSQSL*EQSQIL
Trigger: CAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR-3UTR TCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCCGTTCCCAATCCCTTTaGGAACAGTCTCAAATCCTG +
Preference number: 2 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGRSQSL*EQSQIL
Trigger: CAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACG...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR-3UTR TCA 90 bp GTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTATTCTGGGAATGTCTTaGGTCTCCAGAACAAGGAAC +
Preference number: 2 (lower is better)
Translates to: VGHGSHALMLPVKSMVLAILGMS*VSRTRN
Trigger: GTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAAT...AGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR TCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCCGTTCCCAATCCCTTTaGGAACAGTCTCAAATCCTG +
Preference number: 2 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVRSQSL*EQSQIL
Trigger: CAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACG...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR-3UTR TCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTGGCAGGAGAACTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RRFWECLESPEQGTSTSCGRRTA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAGTTCTCCTGCC...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR GCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTCTTGTCCGACACATCTaGTGGGGGTCTGCCCGAGAT +
Preference number: 2 (lower is better)
Translates to: RRFWECLESPEQGTSTSCLVRHI*WGSARD
Trigger: ATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAG...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGAGAAAGAAGCTCTGCTaGTTGTTGTCGTGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARRKKLC*LLSWLG
Trigger: CCCCAACCACGACAACAAGCAGCAGAGCTTCTTTCT...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CAA 90 bp GAAGCAAATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTaGGCCCTGGAATGGCAAGTGAGTGGGCTTCATAGAAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: EANQIQGADMQTSGP*ALEWQVSGLHRNSL
Trigger: CAGAGAATTTCTATGAAGCCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGATTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR-3UTR TCA 90 bp TTCTCCCGTGATTTCCGCTGTGTTGACAAGCTGCAAATGTGCCAGGAAAGGACTCCCTGGAATGGCAAGTaGGTGGGCTTCATAGAAATT +
Preference number: 2 (lower is better)
Translates to: FSRDFRCVDKLQMCQERTPWNGK*VGFIEI
Trigger: AATTTCTATGAAGCCCACTCACTTGCCATTCCAGGG...AGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTGTAGAAAGGAATGTGTaGGCCAGTGTGGCCATGGCC +
Preference number: 2 (lower is better)
Translates to: RRFWECLESPEQGTSTSCVERNV*ASVAMA
Trigger: GGCCATGGCCACACTGGCCCACACATTCCTTTCTAC...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR TCA 90 bp GAAAATATAACAGTATTCACCCCAGAGAGTGGGATGGCCAATGAGTCTTCTTTCCGTTCCCAATCCCTTTaGGAACAGTCTCAAATCCTG +
Preference number: 2 (lower is better)
Translates to: ENITVFTPESGMANESSFRSQSL*EQSQIL
Trigger: CAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACG...GAAAGAAGACTCATTGGCCATCCCACTCTCTGGGGTGAATACTGTTATATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR TCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTGTCACTGATGTGCAATaGGCCCAATCATATTTCTTA +
Preference number: 2 (lower is better)
Translates to: RRFWECLESPEQGTSTSCVTDVQ*AQSYFL
Trigger: TAAGAAATATGATTGGGCTCATTGCACATCAGTGAC...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR GCA 72 bp GCGGCAGGAGATGGGGTCAGTGTCTGCCCCAGGCTCTaGCGGAGCTGTCTGAGTGGTTCACCGGGAGTGGGT +
Preference number: 3 (lower is better)
Translates to: AAGDGVSVCPRL*RSCLSGSPGVG
Trigger: ACCCACTCCCGGTGAACCACTCAGACAGCTCCGGCAGAGCCTGGGGCAGACACTGACCCCATCTCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CAA 90 bp CGGTGTCCCTGGCCTCTAGCCCAGTGTCTGGTCCGTTGCAGGCACTCACCAAGCAAGAAGCTCTGCTGCTaGTTGTCGTGGTTGGGGGTG +
Preference number: 3 (lower is better)
Translates to: RCPWPLAQCLVRCRHSPSKKLCC*LSWLGV
Trigger: CACCCCCAACCACGACAACAAGCAGCAGAGCTTCTT...GCTTGGTGAGTGCCTGCAACGGACCAGACACTGGGCTAGAGGCCAGGGACACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CAA 90 bp GCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTACAGGGGCTACTCCCCAGCAAACCTCCGGTCCTTaGGCCCTGGAATGGCAAGTG +
Preference number: 3 (lower is better)
Translates to: ALMLPVKSMVLATGATPQQTSGP*ALEWQV
Trigger: CACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTG...CTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR TCA 72 bp CTGAGTGGTTCACCGGGAGTGGGTGGGCCTCGGTGTTaGACACCCAGTCTTCCAGGGAGAGCAAGTCATCTT +
Preference number: 3 (lower is better)
Translates to: LSGSPGVGGPRC*TPSLPGRASHL
Trigger: AAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACCGAGGCCCACCCACTCCCGGTGAACCACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR TCA 72 bp TTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTaGAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: FVPNPFENSLKS*KGKASLRRPQG
Trigger: GCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR TCA 72 bp TGGTCCGTTGCAGGCACTCACCAAGCATCTGCTGAATaGTGGAACAGACGGACACTCAACTGGGGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: WSVAGTHQASAE*WNRRTLNWGGQ
Trigger: CTGGCCACCCCAGTTGAGTGTCCGTCTGTTCCATCATTCAGCAGATGCTTGGTGAGTGCCTGCAACGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR GCA 72 bp GAGCACAGGTGGGTCATGGGAGTCACGCTCTCATGCTaGCTGTCAAGAGCATGGTACTTGCTACAGGGGCTA +
Preference number: 3 (lower is better)
Translates to: EHRWVMGVTLSC*LSRAWYLLQGL
Trigger: TAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCACCTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CCA 72 bp ATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATaGTACTTGCTACAGGGGCTACTCCCCAGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: MGVTLSCCLSRA*YLLQGLLPSSS
Trigger: AGAGCTGCTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR GCA 72 bp TTTGAGCACAGGTGGGTCATGGGAGTCACGCTCTCATaGTGCCTGTCAAGAGCATGGTACTTGCTACAGGGG +
Preference number: 3 (lower is better)
Translates to: FEHRWVMGVTLS*CLSRAWYLLQG
Trigger: CCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCACCTGTGCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR TCA 72 bp GTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTaGGAACAGTCTCAAATCCTGAAAAGGCAAGGCATC +
Preference number: 3 (lower is better)
Translates to: VCPRWGLRSQSL*EQSQILKRQGI
Trigger: GATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR GCA 72 bp CAACATTCTCCCGTGATTTCCGCTGTGTTGACAAGCTaGAAATGTGCCAGGAAAGGACTGGGTGTGGTGGCT +
Preference number: 3 (lower is better)
Translates to: QHSPVISAVLTS*KCARKGLGVVA
Trigger: AGCCACCACACCCAGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CAA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAGGAAAAGAAGTTGCTaGTCCGACACATCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGRKRSC*SDTSAG
Trigger: CCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR-3UTR CAA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGGAAAAGAAGTTGCTaGTCCGACACATCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: SNTRGGYANLRSFGPGMARKRSC*SDTSAG
Trigger: CCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR CCA 72 bp GGGGCTACTCCCCAGCAGCTCTGCTTAAGAAGATTCTaGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGC +
Preference number: 3 (lower is better)
Translates to: GATPQQLCLRRF*ECLESPEQGTS
Trigger: GCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCTTAAGCAGAGCTGCTGGGGAGTAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CAA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCATCGTTCCCAATCCCTTaGAGAACAGTCTCAAATCCT +
Preference number: 3 (lower is better)
Translates to: SNTRGGYANLRSFGPGMASFPIP*RTVSNP
Trigger: AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR GCA 72 bp ATGGTACTTGCTACAGGGGCTACTCCCCAGCAGCTCTaGTTAAGAAGATTCTGGGAATGTCTTGAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: MVLATGATPQQL*LRRFWECLESP
Trigger: TGGAGACTCAAGACATTCCCAGAATCTTCTTAAGCAGAGCTGCTGGGGAGTAGCCCCTGTAGCAAGTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR TCA 72 bp TGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTaGGTGGGCTTCATAGAAATTCTCTGTAGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: CKPPVLWPWNGK*VGFIEILCRKE
Trigger: TTCCTTTCTACAGAGAATTTCTATGAAGCCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR TCA 72 bp CCAGCAGCTCTGCTTAAGAAGATTCTGGGAATGTCTTaGGTCTCCAGAACAAGGAACAAGCACTTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: PAALLKKILGMS*VSRTRNKHFLC
Trigger: GCACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCTTAAGCAGAGCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR-3UTR CAA 90 bp TTCTCCCGTGATTTCCGCTGTGTTGACAAGCTGCAAATGTGCCAGGAAAGGACTGTAAATGACACAAAGTaGAACATAGGGTCAGTGTTG +
Preference number: 3 (lower is better)
Translates to: FSRDFRCVDKLQMCQERTVNDTK*NIGSVL
Trigger: CAACACTGACCCTATGTTCAACTTTGTGTCATTTAC...AGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR GCA 72 bp TGTCTATCTATCTCCTTTGTAGCATTTCCTATGACCTaGAGTCACTTCACTTACTTGTCAGTTTCCCTTACC +
Preference number: 3 (lower is better)
Translates to: CLSISFVAFPMT*SHFTYLSVSLT
Trigger: GGTAAGGGAAACTGACAAGTAAGTGAAGTGACTGCAGGTCATAGGAAATGCTACAAAGGAGATAGATAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CCA 72 bp AACCTGAGTATAAATAAACAACTGCATCTGAAGGGCTaGCCTCATGCTTCTCGAATATATCAGGACCGATTT +
Preference number: 3 (lower is better)
Translates to: NLSINKQLHLKG*PHASRIYQDRF
Trigger: AAATCGGTCCTGATATATTCGAGAAGCATGAGGCCAGCCCTTCAGATGCAGTTGTTTATTTATACTCAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGTTGGGAGGCGGCTCCTaGTCGCGGGCCGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAALGGGS*SRAGAW
Trigger: CCATGCCCCGGCCCGCGAGCAGGAGCCGCCTCCCAA...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGCCTCGTCCCCGGGCCTaGAGGCCGGGATGCTATTGC +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAPRPRA*RPGCYC
Trigger: GCAATAGCATCCCGGCCTCCAGGCCCGGGGACGAGG...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTAGGCCGGGATGCTATTaGCCCGGGCCGCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFRPGCY*PGPPWP
Trigger: AGGCCACGGCGGCCCGGGGCAATAGCATCCCGGCCT...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGAGGCCGGGATGCTATTaGCCCGGGCCGCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GADMQTSGPLALEWQVSGRPGCY*PGPPWP
Trigger: AGGCCACGGCGGCCCGGGGCAATAGCATCCCGGCCT...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCCCAAGATGCTGCTGCTaGCGGCTGTGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPPRCCC*RLWPSP
Trigger: GGGGCTGGGCCACAGCCGGCAGCAGCAGCATCTTGG...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CTTGCTCTGCACAACAGCCCCAGTGTTTCAGGCCCCCTCCCAGGGAGGGCATCACCAAGATGCTGCTGCTaGCGGCTGTGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LALHNSPSVSGPLPGRASPRCCC*RLWPSP
Trigger: GGGGCTGGGCCACAGCCGGCAGCAGCAGCATCTTGG...TGATGCCCTCCCTGGGAGGGGGCCTGAAACACTGGGGCTGTTGTGCAGAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp CTTGCTCTGCACAACAGCCCCAGTGTTTCAGGCCCCCTCCCAGGGAGGGCATCAGGCGGCGGCAGGAGATaGGGTCAGTGTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LALHNSPSVSGPLPGRASGGGRR*GQCLPQ
Trigger: CTGGGGCAGACACTGACCCCATCTCCTGCCGCCGCC...TGATGCCCTCCCTGGGAGGGGGCCTGAAACACTGGGGCTGTTGTGCAGAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGTCTGCCGGAGCTGTCTaGGTGGTTCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAASAGAV*VVHREW
Trigger: CCACTCCCGGTGAACCACTCAGACAGCTCCGGCAGA...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTCGGGCACTTTCCTCATaGGCATCGTGGCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFRALSS*ASWPGR
Trigger: CCGGCCGGGCCACGATGCTCATGAGGAAAGTGCCCG...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGGGCAGGCAGATCGCCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAGRQIA*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGCGATCTGCCTGCC...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR GCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTTTGGGAGGCGGCTCCTaGTCGCGGGCCGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLLGGGS*SRAGAW
Trigger: CCATGCCCCGGCCCGCGAGCAGGAGCCGCCTCCCAA...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTCCGCCAAGATGCTGCTaGTGCCGGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFPPRCC*CRLWPS
Trigger: GCTGGGCCACAGCCGGCAGCAGCAGCATCTTGGCGG...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCACAGACAGCGCAGGGATaGCTGGGTCCGGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSQTAQG*LGPEPR
Trigger: CCGCGGCTCCGGACCCAGGCATCCCTGCGCTGTCTG...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374332.9
CDS-3UTR CCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGGCGGCGGCAGGAGATaGGGTCAGTGTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFGGGRR*GQCLPQ
Trigger: CTGGGGCAGACACTGACCCCATCTCCTGCCGCCGCC...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTCGGGATGGGGGTCCCTaGGCAGGGTTGCCAACCCTG +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFRDGGP*AGLPTL
Trigger: CAGGGTTGGCAACCCTGCCCAGGGACCCCCATCCCG...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTGAGCGCCGCCCGGGATaGGGGTCCCTGGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLERRPG*GSLGRV
Trigger: AACCCTGCCCAGGGACCCCCATCCCGGGCGGCGCTC...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCATCGTGGCCCGGCCGGTaGCTCCAGAAGCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSSWPGR*LQKPSE
Trigger: CTCCGAGGGCTTCTGGAGCCACCGGCCGGGCCACGA...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACATCGTGGCCCGGCCGGTaGCTCCAGAAGCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTSWPGR*LQKPSE
Trigger: CTCCGAGGGCTTCTGGAGCCACCGGCCGGGCCACGA...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCTGGCTCTGGGGCTCCTaGCTCTCATCGGCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPWLWGS*LSSALV
Trigger: AACGAGGGCCGATGAGAGTCAGGAGCCCCAGAGCCA...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TTTGAGCACAGGTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATTGGGAGGCGGCTCCTaGTCGCGGGCCGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: FEHRWVMGVTLSCCLSRALGGGS*SRAGAW
Trigger: CCATGCCCCGGCCCGCGAGCAGGAGCCGCCTCCCAA...TGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCACCTGTGCTCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCGTCTGCCCCAGGCTCTaGCGGAGCTGTCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPVCPRL*RSCLSG
Trigger: ACCACTCAGACAGCTCCGGCAGAGCCTGGGGCAGAC...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCCATCTGCTGGGGGTCTaGCCGAGATGGGGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPHLLGV*PRWGLR
Trigger: ACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATG...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCATCCTGCGGCGGGGACTaGCCCAGCTGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSSCGGD*PSCWGH
Trigger: ATGACCCCAGCAGCTGGGCCAGTCCCCGCCGCAGGA...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGGCTCACCACGCCCTTTaGGATTCCCGTGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAAHHAL*DSRGGV
Trigger: AACACCCCCACGGGAATCCCAAAGGGCGTGGTGAGC...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCCCCGAAGCACAGGGTaGCCAGGCCCGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSPRSTG*PGPRGR
Trigger: TCTTCCTCTCGGGCCTGGTCACCCTGTGCTTCGGGG...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACCCCGAAGCACAGGGTaGCCAGGCCCGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTPRSTG*PGPRGR
Trigger: TCTTCCTCTCGGGCCTGGTCACCCTGTGCTTCGGGG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTTTCCCGTGGGGGTGTTaGACGCCGGCAGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFFPWGC*TPAGAS
Trigger: AGAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAA...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCGCCTGGAGGCCGGGATaGTATTGCCCCGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGAWRPG*YCPGPP
Trigger: CGGCGGCCCGGGGCAATAGCATCCCGGCCTCCAGGC...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCCAAGATGCTGCTGCTaGCGGCTGTGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLPRCCC*RLWPSP
Trigger: GGGGCTGGGCCACAGCCGGCAGCAGCAGCATCTTGG...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCCGCCAAGATGCTGCTaGTGCCGGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLPPRCC*CRLWPS
Trigger: GCTGGGCCACAGCCGGCAGCAGCAGCATCTTGGCGG...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAACTCCGCCAAGATGCTaGTGCTGCCGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTTPPRC*CCRLWP
Trigger: GGGCCACAGCCGGCAGCAGCAGCATCTTGGCGGAGT...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCCAAACTCCGCCAAGATaGTGCTGCTGCCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPQTPPR*CCCRLW
Trigger: CCACAGCCGGCAGCAGCAGCATCTTGGCGGAGTTTG...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTCGCCAAGGGCGATCATaGCCCCGGAGAAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFRQGRS*PRRNRP
Trigger: TGGCCTGTTTCTCCGGGGGCATGATCGCCCTTGGCG...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTCATCTGCTGGGGGTCTaGCCGAGATGGGGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFHLLGV*PRWGLR
Trigger: ACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATG...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGCTTGTCCGACACATCTaGTGGGGGTCTGCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAALVRHI*WGSARD
Trigger: ATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAG...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTTCGCGGGCCGGGGCATaGCCGGCGATTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VGHGSHALMLPVKSMVLASRAGA*PAISAT
Trigger: GGTGGCTGAAATCGCCGGCCATGCCCCGGCCCGCGA...AGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTTCCCAGGACCGGGTaGCGGAGACGGCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTVPRTG*RRRLRN
Trigger: ATTCCGGAGCCGTCTCCGCCACCCGGTCCTGGGAAC...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGCCCTCTTTTCTTCCTTaGCATCCTCGGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAPSFLP*HPRRQG
Trigger: CCCTTGGCGCCGAGGATGCCAAGGAAGAAAAGAGGG...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGCCTCAGGCCCAAGTTTaGTGTCTGAGCGGGCGTATG +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAPQAQV*CLSGRM
Trigger: CATACGCCCGCTCAGACACCAAACTTGGGCCTGAGG...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTTCTCGCTCAGCTGGGTaGCCACGGCCTCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLSRSAG*PRPLCR
Trigger: CCGGCAGAGAGGCCGTGGCCACCCAGCTGAGCGAGA...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGTCTCGCTCAGCTGGGTaGCCACGGCCTCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGSRSAG*PRPLCR
Trigger: CCGGCAGAGAGGCCGTGGCCACCCAGCTGAGCGAGA...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCGTGGTTCACCGGGAGTaGGTGGGCCTCGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPVVHRE*VGLGVE
Trigger: TTCAACACCGAGGCCCACCCACTCCCGGTGAACCAC...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCGTGTGGCCATGGCCCTaGCCTGACATCGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPVWPWP*PDIAES
Trigger: AGACTCAGCGATGTCAGGCCAGGGCCATGGCCACAC...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCATTCCCGTGGGGGTGTTaGACGCCGGCAGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSFPWGC*TPAGAS
Trigger: AGAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAA...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTTCCCACTCACTGGGCTaGGGAAGTTGGGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFSHSLG*GSWGRG
Trigger: GCCTCTACCCCAACTTCCTCAGCCCAGTGAGTGGGA...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCCCCGAGTCCTCCAACTaGGACATGGTGTTGCACCCA +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPPESSN*DMVLHP
Trigger: TGGGTGCAACACCATGTCTCAGTTGGAGGACTCGGG...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGGTGGGCCTCGGTGTTaGACACCCAGTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTGGPRC*TPSLPG
Trigger: CCCTGGAAGACTGGGTGTTCAACACCGAGGCCCACC...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp ACTGCAGGGCTTATGACTGTCTCACTCTCAGCGGTGTCCCTGGCCTCTAGCCCAGGTGGGCCTCGGTGTTaGACACCCAGTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TAGLMTVSLSAVSLASSPGGPRC*TPSLPG
Trigger: CCCTGGAAGACTGGGTGTTCAACACCGAGGCCCACC...TGGGCTAGAGGCCAGGGACACCGCTGAGAGTGAGACAGTCATAAGCCCTGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGACTCCGCCAAGATGCTaGTGCTGCCGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPTPPRC*CCRLWP
Trigger: GGGCCACAGCCGGCAGCAGCAGCATCTTGGCGGAGT...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGACTCCGCCAAGATGCTaGTGCTGCCGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGTPPRC*CCRLWP
Trigger: GGGCCACAGCCGGCAGCAGCAGCATCTTGGCGGAGT...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACGCCAAGGGCGATCATaGCCCCGGAGAAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTRQGRS*PRRNRP
Trigger: TGGCCTGTTTCTCCGGGGGCATGATCGCCCTTGGCG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCACGCCAAGGGCGATCATaGCCCCGGAGAAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSRQGRS*PRRNRP
Trigger: TGGCCTGTTTCTCCGGGGGCATGATCGCCCTTGGCG...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGCTTGGTGATCTGGGCTaGGAGCTCTCGGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GADMQTSGPLALEWQVSGLGDLG*ELSVVG
Trigger: GCCCACTACCGAGAGCTCGCAGCCCAGATCACCAAG...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAGTCTGCCCCAGGCTCTaGCGGAGCTGTCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSVCPRL*RSCLSG
Trigger: ACCACTCAGACAGCTCCGGCAGAGCCTGGGGCAGAC...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCATCGCGGGCCGGGGCATaGCCGGCGATTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMASRAGA*PAISAT
Trigger: GGTGGCTGAAATCGCCGGCCATGCCCCGGCCCGCGA...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTTCGCGGGCCGGGGCATaGCCGGCGATTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPSRAGA*PAISAT
Trigger: GGTGGCTGAAATCGCCGGCCATGCCCCGGCCCGCGA...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGGTTCCCAGGACCGGGTaGCGGAGACGGCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGVPRTG*RRRLRN
Trigger: ATTCCGGAGCCGTCTCCGCCACCCGGTCCTGGGAAC...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTCCGCTCACGTTCAGGTaGAAGCTCTCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFPLTFR*KLSPTQ
Trigger: CTGGGTGGGAGAGAGCTTCCACCTGAACGTGAGCGG...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGCCGCTCACGTTCAGGTaGAAGCTCTCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: GADMQTSGPLALEWQVSGPLTFR*KLSPTQ
Trigger: CTGGGTGGGAGAGAGCTTCCACCTGAACGTGAGCGG...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACCGGAGCTGTCTGAGTaGTTCACCGGGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTPELSE*FTGSGW
Trigger: CCACCCACTCCCGGTGAACCACTCAGACAGCTCCGG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTGTCCGACACATCTGCTaGGGGTCTGCCCGAGATGGG +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSVRHIC*GSARDG
Trigger: CCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGAC...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCTGTCAGGTAGAAGGCTaGGAGGAGTCCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPCQVEG*EESPDV
Trigger: TACATCGGGGGACTCCTCTCAGCCTTCTACCTGACA...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCCGGGCACTTTCCTCATaGGCATCGTGGCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGRALSS*ASWPGR
Trigger: CCGGCCGGGCCACGATGCTCATGAGGAAAGTGCCCG...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGCCTGGAGGCCGGGATaGTATTGCCCCGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARAWRPG*YCPGPP
Trigger: CGGCGGCCCGGGGCAATAGCATCCCGGCCTCCAGGC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCAAACTCCGCCAAGATaGTGCTGCTGCCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSQTPPR*CCCRLW
Trigger: CCACAGCCGGCAGCAGCAGCATCTTGGCGGAGTTTG...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACTTGGTGATCTGGGCTaGGAGCTCTCGGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTLGDLG*ELSVVG
Trigger: GCCCACTACCGAGAGCTCGCAGCCCAGATCACCAAG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTGTCTGCCCCAGGCTCTaGCGGAGCTGTCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLVCPRL*RSCLSG
Trigger: ACCACTCAGACAGCTCCGGCAGAGCCTGGGGCAGAC...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGGAGTCAATGACTGTTaGCCCGCTGAGGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFGVNDC*PAEASS
Trigger: AGAGGAGGCCTCAGCGGGGCAACAGTCATTGACTCC...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR CCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCTCCTGCGGCGGGGACTaGCCCAGCTGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGSCGGD*PSCWGH
Trigger: ATGACCCCAGCAGCTGGGCCAGTCCCCGCCGCAGGA...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTCCTCGTCCCCGGGCCTaGAGGCCGGGATGCTATTGC +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPPRPRA*RPGCYC
Trigger: GCAATAGCATCCCGGCCTCCAGGCCCGGGGACGAGG...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCTCGTCCCCGGGCCTaGAGGCCGGGATGCTATTGC +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCPRPRA*RPGCYC
Trigger: GCAATAGCATCCCGGCCTCCAGGCCCGGGGACGAGG...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCTCTCGCTCAGCTGGGTaGCCACGGCCTCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCSRSAG*PRPLCR
Trigger: CCGGCAGAGAGGCCGTGGCCACCCAGCTGAGCGAGA...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCCCACTCCCTGTAGATaGGGTTGTGGGTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSPTPCR*GCGSVA
Trigger: GGCGACAGACCCACAACCCCATCTACAGGGAGTGGG...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGTGCTGCTTGTTGTCGTaGTTGGGGGTGCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAACCLLS*LGVLLY
Trigger: GTACAGTAGCACCCCCAACCACGACAACAAGCAGCA...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTGTGGTTCACCGGGAGTaGGTGGGCCTCGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSVVHRE*VGLGVE
Trigger: TTCAACACCGAGGCCCACCCACTCCCGGTGAACCAC...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCGGCGGCGGCAGGAGATaGGGTCAGTGTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCGGGRR*GQCLPQ
Trigger: CTGGGGCAGACACTGACCCCATCTCCTGCCGCCGCC...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGGGGGTCTGCCCGAGATaGGGCCTTCGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGGVCPR*GLRSQS
Trigger: GGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCC...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTGGGGTCTGCCCGAGATaGGGCCTTCGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLGVCPR*GLRSQS
Trigger: GGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCC...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGGTCCGACACATCTGCTaGGGGTCTGCCCGAGATGGG +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPVRHIC*GSARDG
Trigger: CCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGAC...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTGTGGCCATGGCCCTaGCCTGACATCGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTVWPWP*PDIAES
Trigger: AGACTCAGCGATGTCAGGCCAGGGCCATGGCCACAC...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAGTGTGGCCATGGCCCTaGCCTGACATCGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSVWPWP*PDIAES
Trigger: AGACTCAGCGATGTCAGGCCAGGGCCATGGCCACAC...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCAGCTGGGAGCCGGAGTaGCCAGGGAGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCSWEPE*PGSRSR
Trigger: CCTGCTCCTGCTCCCTGGCCACTCCGGCTCCCAGCT...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374332.9
CDS-3UTR TCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTCCCCGAAGCACAGGGTaGCCAGGCCCGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPPRSTG*PGPRGR
Trigger: TCTTCCTCTCGGGCCTGGTCACCCTGTGCTTCGGGG...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCCCTTGCGGATGTTCCTaGCCTTTTCAGCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPPCGCS*PFQRRP
Trigger: AGGTCTTCGCTGAAAAGGTCAGGAACATCCGCAAGG...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
CDS-3UTR TCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCGCTTTTCGATCTTCCTaGGGACCTTGCGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPAFRSS*GPCGCS
Trigger: GGAACATCCGCAAGGTCCTCAGGAAGATCGAAAAGC...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGGCAGGAGAATCGCTTaGACCCGGGAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTGRRIA*TREAEV
Trigger: AACTTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCC...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR GCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAGGAGTCAATGACTGTTaGCCCGCTGAGGCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSGVNDC*PAEASE
Trigger: TTCGGAGGCCTCAGCGGGGCAACAGTCATTGACTCC...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTACAGGGGCTACTCCCCAGCTTGGTGATCTGGGCTaGGAGCTCTCGGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: ALMLPVKSMVLATGATPQLGDLG*ELSVVG
Trigger: GCCCACTACCGAGAGCTCGCAGCCCAGATCACCAAG...CTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACTTGTCCGACACATCTaGTGGGGGTCTGCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTLVRHI*WGSARD
Trigger: ATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CTTGCTCTGCACAACAGCCCCAGTGTTTCAGGCCCCCTCCCAGGGAGGGCATCATACAAGGGGCGGATATaGAAACCTCCGGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: LALHNSPSVSGPLPGRASYKGRI*KPPVLW
Trigger: CCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTA...TGATGCCCTCCCTGGGAGGGGGCCTGAAACACTGGGGCTGTTGTGCAGAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCCGGGAGGCAGAAGTTaGAGTGAGCCGAGACTATGC +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSPGGRS*SEPRLC
Trigger: GCATAGTCTCGGCTCACTGCAACTTCTGCCTCCCGG...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR CCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTTTGATTTTCTCCCGCTaGGCTCGCACTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFLIFSR*ARTWLW
Trigger: CCAGAGCCAAGTGCGAGCCCAGCGGGAGAAAATCAA...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGGCTCACCACGCCCTTTaGGATTCCCGTGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGAHHAL*DSRGGV
Trigger: AACACCCCCACGGGAATCCCAAAGGGCGTGGTGAGC...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACCCTCTTTTCTTCCTTaGCATCCTCGGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTPSFLP*HPRRQG
Trigger: CCCTTGGCGCCGAGGATGCCAAGGAAGAAAAGAGGG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCACCCTCTTTTCTTCCTTaGCATCCTCGGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSPSFLP*HPRRQG
Trigger: CCCTTGGCGCCGAGGATGCCAAGGAAGAAAAGAGGG...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCCACTCCCTGTAGATaGGGTTGTGGGTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGPTPCR*GCGSVA
Trigger: GGCGACAGACCCACAACCCCATCTACAGGGAGTGGG...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCCCACTCCCTGTAGATaGGGTTGTGGGTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLPTPCR*GCGSVA
Trigger: GGCGACAGACCCACAACCCCATCTACAGGGAGTGGG...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGGTAGAAAGGAATGTGTaGGCCAGTGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: GADMQTSGPLALEWQVSGVERNV*ASVAMA
Trigger: GGCCATGGCCACACTGGCCCACACATTCCTTTCTAC...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCCCTTTGGCCCTGGAATaGCAAGTGAGTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPPLALE*QVSGLH
Trigger: ATGAAGCCCACTCACTTGCCATTCCAGGGCCAAAGG...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGAAGTTCAGGGAGTTTaGAGCGAGTCCTCCCGCGAG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTEVQGV*SESSRE
Trigger: CTCGCGGGAGGACTCGCTCCAAACTCCCTGAACTTC...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCATGGCTCTGGGGCTCCTaGCTCTCATCGGCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAWLWGS*LSSALV
Trigger: AACGAGGGCCGATGAGAGTCAGGAGCCCCAGAGCCA...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGCTTCTCTCCCAGCCTaGTGGCCTTTATTCGGAACA +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFASLPA*WPLFGT
Trigger: TGTTCCGAATAAAGGCCATCAGGCTGGGAGAGAAGC...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCTTCCCGTGGGGGTGTTaGACGCCGGCAGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCFPWGC*TPAGAS
Trigger: AGAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAA...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGCCCGAGTCCTCCAACTaGGACATGGTGTTGCACCCA +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPPESSN*DMVLHP
Trigger: TGGGTGCAACACCATGTCTCAGTTGGAGGACTCGGG...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp GTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTCGTGACACGTCTTGGTaGTCTGGGCTGCGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VGHGSHALMLPVKSMVLARDTSW*SGLRAL
Trigger: GAGAGCTCGCAGCCCAGATCACCAAGACGTGTCACG...AGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCGGGCGTATGACTCGTaGCACGTCTTGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGRAYDS*HVLVIW
Trigger: CCAGATCACCAAGACGTGTCACGAGTCATACGCCCG...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCGGTGGGCCTCGGTGTTaGACACCCAGTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCGGPRC*TPSLPG
Trigger: CCCTGGAAGACTGGGTGTTCAACACCGAGGCCCACC...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCTCTGCCGGAGCTGTCTaGGTGGTTCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCSAGAV*VVHREW
Trigger: CCACTCCCGGTGAACCACTCAGACAGCTCCGGCAGA...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCATCTGCCGGAGCTGTCTaGGTGGTTCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMASAGAV*VVHREW
Trigger: CCACTCCCGGTGAACCACTCAGACAGCTCCGGCAGA...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCCAGGGTTGCCAACCCTaGGAGTTTCGCCGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGQGCQP*EFRRFG
Trigger: CCCGAAGCGGCGAAACTCTCAGGGTTGGCAACCCTG...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACATTCTGGGTCTTGGCTTaGAGGTCACCTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTFWVLA*RSPAQR
Trigger: TCTCTGGGCAGGTGACCTTCAAGCCAAGACCCAGAA...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCCAAGATGCTGCTGCTaGCGGCTGTGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARPRCCC*RLWPSP
Trigger: GGGGCTGGGCCACAGCCGGCAGCAGCAGCATCTTGG...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCCGCCAAGATGCTGCTaGTGCCGGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARPPRCC*CRLWPS
Trigger: GCTGGGCCACAGCCGGCAGCAGCAGCATCTTGGCGG...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTCATCTGCTGGGGGTCTaGCCGAGATGGGGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPHLLGV*PRWGLR
Trigger: ACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATG...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCAGGAAGAGGAACTTCTaGGGCAGCCGCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCRKRNF*GSRSPH
Trigger: GTGGGGGCTGCGGCTGCCGCAGAAGTTCCTCTTCCT...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGGAAGAGGAACTTCTaGGGCAGCCGCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMARKRNF*GSRSPH
Trigger: GTGGGGGCTGCGGCTGCCGCAGAAGTTCCTCTTCCT...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCGGTGAGGAATCTTCATaGATTCCTCTACCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPGEESS*IPLPLP
Trigger: TGGCAGGGGTAGAGGAATGCATGAAGATTCCTCACC...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR GCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAAGTGAGCCGAGACTATaGCACTGCACTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTSEPRL*HCTPVW
Trigger: CCAGACTGGAGTGCAGTGGCATAGTCTCGGCTCACT...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR GCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGGCTGTGTTGACAAGCTaGAAATGTGCCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAAVLTS*KCARKG
Trigger: TCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGC...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAGAGAGGGGAGGTACCTaGCTAAGTTCACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSERGGT*LSSHSR
Trigger: CCTGCTGTGTGAACTTAGGCAGGTACCTCCCCTCTC...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAGGAGTCACGCTCTCATaGTGCCTGTCAAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSGVTLS*CLSRAW
Trigger: CCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCC...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCATTGATTTTCTCCCGCTaGGCTCGCACTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSLIFSR*ARTWLW
Trigger: CCAGAGCCAAGTGCGAGCCCAGCGGGAGAAAATCAA...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCATCGGTATAACAGCCTaGGGTCCTCTAGGACCACAT +
Preference number: 4 (lower is better)
Translates to: LLVRHICWGSARDGAFVPIGITA*GPLGPH
Trigger: ATGTGGTCCTAGAGGACCCCAGGCTGTTATACCGAT...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS-3UTR CCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGCCTCAGGCCCAAGTTTaGTGTCTGAGCGGGCGTATG +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPPQAQV*CLSGRM
Trigger: CATACGCCCGCTCAGACACCAAACTTGGGCCTGAGG...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGTCTCGCTCAGCTGGGTaGCCACGGCCTCTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARSRSAG*PRPLCR
Trigger: CCGGCAGAGAGGCCGTGGCCACCCAGCTGAGCGAGA...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGGCTCTCCACCACCTCTaGCCGGAGGATGTAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPALHHL*PEDVVA
Trigger: AGCTACTACATCCTCCGGCCAGAGGTGGTGGAGAGC...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTGCTCTCCACCACCTCTaGCCGGAGGATGTAGTAGCT +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLALHHL*PEDVVA
Trigger: AGCTACTACATCCTCCGGCCAGAGGTGGTGGAGAGC...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTTGCTGCTTGTTGTCGTaGTTGGGGGTGCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFCCLLS*LGVLLY
Trigger: GTACAGTAGCACCCCCAACCACGACAACAAGCAGCA...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTTGAGCACAGGTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCAGTGGTTCACCGGGAGTaGGTGGGCCTCGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: FEHRWVMGVTLSCCLSRAVVHRE*VGLGVE
Trigger: TTCAACACCGAGGCCCACCCACTCCCGGTGAACCAC...TGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCACCTGTGCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp AGAGAGGGGAGGTACCTGCCTAAGTTCACACAGCAGGGATTTAAAGCCGGGTCACCGGAGCTGTCTGAGTaGTTCACCGGGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: REGRYLPKFTQQGFKAGSPELSE*FTGSGW
Trigger: CCACCCACTCCCGGTGAACCACTCAGACAGCTCCGG...TGACCCGGCTTTAAATCCCTGCTGTGTGAACTTAGGCAGGTACCTCCCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGTCCGACACATCTGCTaGGGGTCTGCCCGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPVRHIC*GSARDG
Trigger: CCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGAC...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTGTAGAAAGGAATGTGTaGGCCAGTGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSVERNV*ASVAMA
Trigger: GGCCATGGCCACACTGGCCCACACATTCCTTTCTAC...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGTGTTGAACACCCAGTCTTCCAGGGAGAGCAAGTCATCTTCAGAGAACAGAAGCGGGATGGGGGTCCCTaGGCAGGGTTGCCAACCCTG +
Preference number: 4 (lower is better)
Translates to: GVEHPVFQGEQVIFREQKRDGGP*AGLPTL
Trigger: CAGGGTTGGCAACCCTGCCCAGGGACCCCCATCCCG...CTTCTGTTCTCTGAAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CAA 72 bp TCTGAGTGGTTCACCGGGAGTGGGTGGGCCTCGGTGTaGAACACCCAGTCTTCCAGGGAGAGCAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: SEWFTGSGWASV*NTQSSRESKSS
Trigger: AGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACCGAGGCCCACCCACTCCCGGTGAACCACTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGGGCTCCGGAATGCGTTaGAGTCAAAGCGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGGSGMR*SQSGKG
Trigger: TCCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCC...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGTGTCAGGTAGAAGGCTaGGAGGAGTCCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGCQVEG*EESPDV
Trigger: TACATCGGGGGACTCCTCTCAGCCTTCTACCTGACA...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTGCTTCTCTCCCAGCCTaGTGGCCTTTATTCGGAACA +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSASLPA*WPLFGT
Trigger: TGTTCCGAATAAAGGCCATCAGGCTGGGAGAGAAGC...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCCCAGTTCCCACTTTTaGAGCTCACCACGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLPSSHF*SSPRPL
Trigger: CAAAGGGCGTGGTGAGCTTCAAAAGTGGGAACTGGG...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGCTTTTCGATCTTCCTaGGGACCTTGCGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTAFRSS*GPCGCS
Trigger: GGAACATCCGCAAGGTCCTCAGGAAGATCGAAAAGC...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCTCCCACTCACTGGGCTaGGGAAGTTGGGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGSHSLG*GSWGRG
Trigger: GCCTCTACCCCAACTTCCTCAGCCCAGTGAGTGGGA...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCATCCCACTCACTGGGCTaGGGAAGTTGGGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMASHSLG*GSWGRG
Trigger: GCCTCTACCCCAACTTCCTCAGCCCAGTGAGTGGGA...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCGGTGGGCCTCGGTGTTaGACACCCAGTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVGGPRC*TPSLPG
Trigger: CCCTGGAAGACTGGGTGTTCAACACCGAGGCCCACC...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp ACTGCAGGGCTTATGACTGTCTCACTCTCAGCGGTGTCCCTGGCCTCTAGCCCAACTGCATCATCTCCTTaGTTTTCTCCCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TAGLMTVSLSAVSLASSPTASSP*FSPAGL
Trigger: GAGCCCAGCGGGAGAAAATCAAGGAGATGATGCAGT...TGGGCTAGAGGCCAGGGACACCGCTGAGAGTGAGACAGTCATAAGCCCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACCTTGCGGATGTTCCTaGCTGTTGCCTTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTPCGCS*LLPFQR
Trigger: TCGCTGAAAAGGCAACAGTCAGGAACATCCGCAAGG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCGGTGGGCGGATCACCTaGGCTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCGGRIT*AQEFKT
Trigger: GGTCTTGAACTCCTGAGCTCAGGTGATCCGCCCACC...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCCGCCAAGATGCTGCTaGTGCCGGCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPPPRCC*CRLWPS
Trigger: GCTGGGCCACAGCCGGCAGCAGCAGCATCTTGGCGG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGACTCCGCCAAGATGCTaGTGCTGCCGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARTPPRC*CCRLWP
Trigger: GGGCCACAGCCGGCAGCAGCAGCATCTTGGCGGAGT...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCAAACTCCGCCAAGATaGTGCTGCTGCCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCQTPPR*CCCRLW
Trigger: CCACAGCCGGCAGCAGCAGCATCTTGGCGGAGTTTG...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCGCCAAGGGCGATCATaGCCCCGGAGAAACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGRQGRS*PRRNRP
Trigger: TGGCCTGTTTCTCCGGGGGCATGATCGCCCTTGGCG...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACTTGGTGATCTGGGCTaGGAGCTCTCGGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMALGDLG*ELSVVG
Trigger: GCCCACTACCGAGAGCTCGCAGCCCAGATCACCAAG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACATGTCGTGGTTGGGGGTaGTACTGTACACGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTCRGWG*YCTRLG
Trigger: TCCAAGACGTGTACAGTAGCACCCCCAACCACGACA...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGCAGAGGAAAAGAAGTTaGTTGTCCGACACATCTGCT +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAQRKRS*LSDTSA
Trigger: AGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTG...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCGCATTCCTCTACCCCTaGCACCCCAGGCCCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCAFLYP*HPRPLQ
Trigger: TTGCAAGGGCCTGGGGTGGCAGGGGTAGAGGAATGC...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGTTCCCAGGACCGGGTaGCGGAGACGGCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARVPRTG*RRRLRN
Trigger: ATTCCGGAGCCGTCTCCGCCACCCGGTCCTGGGAAC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAGCTCACCACGCCCTTTaGGATTCCCGTGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAAHHAL*DSRGGV
Trigger: AACACCCCCACGGGAATCCCAAAGGGCGTGGTGAGC...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGCTACTGTACACGTCTTaGATCCCAGAGAAACCGGCT +
Preference number: 4 (lower is better)
Translates to: GADMQTSGPLALEWQVSGLLYTS*IPEKPA
Trigger: AGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAG...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCATGCTGCTTGTTGTCGTaGTTGGGGGTGCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSCCLLS*LGVLLY
Trigger: GTACAGTAGCACCCCCAACCACGACAACAAGCAGCA...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCCGGAGCTGTCTGAGTaGTTCACCGGGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGPELSE*FTGSGW
Trigger: CCACCCACTCCCGGTGAACCACTCAGACAGCTCCGG...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCGTCCGACACATCTGCTaGGGGTCTGCCCGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVVRHIC*GSARDG
Trigger: CCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGAC...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTGTAGAAAGGAATGTGTaGGCCAGTGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLVERNV*ASVAMA
Trigger: GGCCATGGCCACACTGGCCCACACATTCCTTTCTAC...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTGAAGTTCAGGGAGTTTaGAGCGAGTCCTCCCGCGAG +
Preference number: 4 (lower is better)
Translates to: VGHGSHALMLPVKSMVLAEVQGV*SESSRE
Trigger: CTCGCGGGAGGACTCGCTCCAAACTCCCTGAACTTC...AGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CAA 72 bp CTTTCGGCTGCTCCTTTTTATCTTCTGGGTCTTGGCTaGAAGGTCACCTGCCCAGAGAGGCCCTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: LSAAPFYLLGLG*KVTCPERPSLT
Trigger: GGTCAGGGAGGGCCTCTCTGGGCAGGTGACCTTCAAGCCAAGACCCAGAAGATAAAAAGGAGCAGCCGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACCGCTGTGTCTCCTTaGTTTTCTCCCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGTAVSP*FSPAGL
Trigger: GAGCCCAGCGGGAGAAAATCAAGGAGACACAGCGGT...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS-3UTR TCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGGCTTCTCTCCCAGCCTaGTGGCCTTTATTCGGAACA +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGASLPA*WPLFGT
Trigger: TGTTCCGAATAAAGGCCATCAGGCTGGGAGAGAAGC...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp GCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTACAGGGGCTACTCCCCAGGCTTCTCTCCCAGCCTaGTGGCCTTTATTCGGAACA +
Preference number: 4 (lower is better)
Translates to: ALMLPVKSMVLATGATPQASLPA*WPLFGT
Trigger: TGTTCCGAATAAAGGCCATCAGGCTGGGAGAGAAGC...CTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGTTCCCGTGGGGGTGTTaGACGCCGGCAGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARFPWGC*TPAGAS
Trigger: AGAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAA...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGCCTTGCGGATGTTCCTaGCCTTTTCAGCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPPCGCS*PFQRRP
Trigger: AGGTCTTCGCTGAAAAGGTCAGGAACATCCGCAAGG...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
CDS-3UTR TCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTCCCACTCACTGGGCTaGGGAAGTTGGGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVSHSLG*GSWGRG
Trigger: GCCTCTACCCCAACTTCCTCAGCCCAGTGAGTGGGA...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACCCGAGTCCTCCAACTaGGACATGGTGTTGCACCCA +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAPESSN*DMVLHP
Trigger: TGGGTGCAACACCATGTCTCAGTTGGAGGACTCGGG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCCCCGAGTCCTCCAACTaGGACATGGTGTTGCACCCA +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGPESSN*DMVLHP
Trigger: TGGGTGCAACACCATGTCTCAGTTGGAGGACTCGGG...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTCCCTGGAATGGCAAGTaGGTGGGCTTCATAGAAATT +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFPWNGK*VGFIEI
Trigger: AATTTCTATGAAGCCCACTCACTTGCCATTCCAGGG...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp GGTGTTGAACACCCAGTCTTCCAGGGAGAGCAAGTCATCTTCAGAGAACAGAAGCAGGGTTGCCAACCCTaGGAGTTTCGCCGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GVEHPVFQGEQVIFREQKQGCQP*EFRRFG
Trigger: CCCGAAGCGGCGAAACTCTCAGGGTTGGCAACCCTG...CTTCTGTTCTCTGAAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGACTGCATCATCTCCTTaGTTTTCTCCCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGTASSP*FSPAGL
Trigger: GAGCCCAGCGGGAGAAAATCAAGGAGATGATGCAGT...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GAAAATATAACAGTATTCACCCCAGAGAGTGGGATGGCCAATGAGTCTTCTTTCGCCTGGAGGCCGGGATaGTATTGCCCCGGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ENITVFTPESGMANESSFAWRPG*YCPGPP
Trigger: CGGCGGCCCGGGGCAATAGCATCCCGGCCTCCAGGC...GAAAGAAGACTCATTGGCCATCCCACTCTCTGGGGTGAATACTGTTATATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGGAGACGGCTCCGGAATaGGTTGAAGTCAAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPETAPE*VEVKAE
Trigger: TTCCGCTTTGACTTCAACGCATTCCGGAGCCGTCTC...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCGGAGTCAATGACTGTTaGCCCGCTGAGGCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCGVNDC*PAEASE
Trigger: TTCGGAGGCCTCAGCGGGGCAACAGTCATTGACTCC...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACACCTCAAACAAGGATaGTTCTCCGCTCACGTTCAG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTHLKQG*FSAHVQ
Trigger: CTGAACGTGAGCGGAGAAGCATCCTTGTTTGAGGTG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTCCTCCATATCTGTCTTaGCCGACATCAACCAGGATT +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFPPYLS*PTSTRI
Trigger: AATCCTGGTTGATGTCGGGCAAGACAGATATGGAGG...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGTGTCGTGGTTGGGGGTaGTACTGTACACGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGCRGWG*YCTRLG
Trigger: TCCAAGACGTGTACAGTAGCACCCCCAACCACGACA...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACTTGTCCGACACATCTaGTGGGGGTCTGCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMALVRHI*WGSARD
Trigger: ATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTAACAAGCACTTCCTGTaGCCAGGGAACCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLNKHFL*PGNQQL
Trigger: AAGCTGCTGGTTCCCTGGGCACAGGAAGTGCTTGTT...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGGGGTCAGATGCCTCATaGATCGGTATAACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGGSDAS*IGITAW
Trigger: CCAGGCTGTTATACCGATCCATGAGGCATCTGACCC...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS-3UTR CCA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCCGCTCACGTTCAGGTaGAAGCTCTCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGPLTFR*KLSPTQ
Trigger: CTGGGTGGGAGAGAGCTTCCACCTGAACGTGAGCGG...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTTTTTCAGCGAAGACCTaGTTGCCAGAGAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFFSAKT*LPESSV
Trigger: CACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAA...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCCCCTCTTTTCTTCCTTaGCATCCTCGGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGPSFLP*HPRRQG
Trigger: CCCTTGGCGCCGAGGATGCCAAGGAAGAAAAGAGGG...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGGCTTGTTGTCGTGGTTaGGGGTGCTACTGTACACGT +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGACCRG*GCYCTR
Trigger: ACGTGTACAGTAGCACCCCCAACCACGACAACAAGC...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGGGGTCTGCCCGAGATaGGGCCTTCGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARGVCPR*GLRSQS
Trigger: GGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTTGGCCCTGGAATaGCAAGTGAGTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGPLALE*QVSGLH
Trigger: ATGAAGCCCACTCACTTGCCATTCCAGGGCCAAAGG...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAAGGGGGCTGGGTTATaGGAAGTTCATTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSKGAGL*EVHSSA
Trigger: GGCAGAAGAATGAACTTCCCATAACCCAGCCCCCTT...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTTGTCAGGTAGAAGGCTaGGAGGAGTCCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPCQVEG*EESPDV
Trigger: TACATCGGGGGACTCCTCTCAGCCTTCTACCTGACA...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCTGTCAGGTAGAAGGCTaGGAGGAGTCCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGCQVEG*EESPDV
Trigger: TACATCGGGGGACTCCTCTCAGCCTTCTACCTGACA...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCCCCAGTTCCCACTTTTaGAGCTCACCACGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGPSSHF*SSPRPL
Trigger: CAAAGGGCGTGGTGAGCTTCAAAAGTGGGAACTGGG...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCCGGGCGTATGACTCGTaGCACGTCTTGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVRAYDS*HVLVIW
Trigger: CCAGATCACCAAGACGTGTCACGAGTCATACGCCCG...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAAACAGTCTCAAATCCTaGAAAGGCAAGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTNSLKS*KGKASL
Trigger: CAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGTT...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACGTTCCCAATCCCTTTaGGAACAGTCTCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTRSQSL*EQSQIL
Trigger: CAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TTCTCCCGTGATTTCCGCTGTGTTGACAAGCTGCAAATGTGCCAGGAAAGGACTCGCTTTCTCCCCTCTTaGCCCCTTGACTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FSRDFRCVDKLQMCQERTRFLPS*PLDCRA
Trigger: AGCCCTGCAGTCAAGGGGTCAAGAGGGGAGAAAGCG...AGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGTTCGTTTTTCCCCATTaGATAACGCTTATAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAFVFPH*ITLIAL
Trigger: CAGAGCTATAAGCGTTATGCAATGGGGAAAAACGAA...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGCACCTCAAACAAGGATaGTTCTCCGCTCACGTTCAG +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPHLKQG*FSAHVQ
Trigger: CTGAACGTGAGCGGAGAAGCATCCTTGTTTGAGGTG...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACCTCCATATCTGTCTTaGCCGACATCAACCAGGATT +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTPPYLS*PTSTRI
Trigger: AATCCTGGTTGATGTCGGGCAAGACAGATATGGAGG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTGCTAGAAAGAAGCTCTaGTGCTTGTTGTCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSARKKL*CLLSWL
Trigger: CAACCACGACAACAAGCAGCAGAGCTTCTTTCTAGC...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCGTCTGCCCCAGGCTCTaGCGGAGCTGTCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPVCPRL*RSCLSG
Trigger: ACCACTCAGACAGCTCCGGCAGAGCCTGGGGCAGAC...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCCTTGTCCGACACATCTaGTGGGGGTCTGCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVLVRHI*WGSARD
Trigger: ATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAG...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTACTCCCCAGCAGCTCTaGTTAAGAAGATTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSTPQQL*LRRFWE
Trigger: TTCCCAGAATCTTCTTAAGCAGAGCTGCTGGGGAGT...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp TTTGAGCACAGGTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCAGTCACGCTCTCATGCTaGCTGTCAAGAGCATGGTAC +
Preference number: 4 (lower is better)
Translates to: FEHRWVMGVTLSCCLSRAVTLSC*LSRAWY
Trigger: GTACCATGCTCTTGACAGGCAGCATGAGAGCGTGAC...TGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCACCTGTGCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp GGTGTTGAACACCCAGTCTTCCAGGGAGAGCAAGTCATCTTCAGAGAACAGAAGCCGCTCACGTTCAGGTaGAAGCTCTCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: GVEHPVFQGEQVIFREQKPLTFR*KLSPTQ
Trigger: CTGGGTGGGAGAGAGCTTCCACCTGAACGTGAGCGG...CTTCTGTTCTCTGAAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGCTCACCACGCCCTTTaGGATTCCCGTGGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARAHHAL*DSRGGV
Trigger: AACACCCCCACGGGAATCCCAAAGGGCGTGGTGAGC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACATTTTCAGCGAAGACCTaGTTGCCAGAGAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTFSAKT*LPESSV
Trigger: CACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAA...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCATTTTCAGCGAAGACCTaGTTGCCAGAGAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSFSAKT*LPESSV
Trigger: CACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAA...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCCCAGTTCCCACTCACTaGGCTGAGGAAGTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGPVPTH*AEEVGV
Trigger: TACCCCAACTTCCTCAGCCCAGTGAGTGGGAACTGG...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGTGGTTCACCGGGAGTaGGTGGGCCTCGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARVVHRE*VGLGVE
Trigger: TTCAACACCGAGGCCCACCCACTCCCGGTGAACCAC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCCGGAGCTGTCTGAGTaGTTCACCGGGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPPELSE*FTGSGW
Trigger: CCACCCACTCCCGGTGAACCACTCAGACAGCTCCGG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTCTCCCGTGATTTCCGCTGTGTTGACAAGCTGCAAATGTGCCAGGAAAGGACTGTGTGGCCATGGCCCTaGCCTGACATCGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: FSRDFRCVDKLQMCQERTVWPWP*PDIAES
Trigger: AGACTCAGCGATGTCAGGCCAGGGCCATGGCCACAC...AGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGTCTCAGCGGTGTCCCTaGCCTCTAGCCCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARSQRCP*PLAQCL
Trigger: CAGACACTGGGCTAGAGGCCAGGGACACCGCTGAGA...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CAA 72 bp GTCTCCAAGTCTTGTCTCCTCACAGAGGAAAAGAAGTaGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: VSKSCLLTEEKK*LVRHICWGSAR
Trigger: TCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAGACTTGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR CAA 72 bp CATGGCCCTGGCCTGACATCGCTGAGTCTCCAAGTCTaGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: HGPGLTSLSLQV*SPHRGKEVACP
Trigger: CGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAGACTTGGAGACTCAGCGATGTCAGGCCAGGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACATGCCAGAGAGTTCAGTaGGGTGTAAGAATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTCQRVQ*GVRIPS
Trigger: ACTTGGAATTCTTACACCTCACTGAACTCTCTGGCA...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGCTTTTCGATCTTCCTaGGGACCTTGCGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPAFRSS*GPCGCS
Trigger: GGAACATCCGCAAGGTCCTCAGGAAGATCGAAAAGC...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCGTGACACGTCTTGGTaGTCTGGGCTGCGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPRDTSW*SGLRAL
Trigger: GAGAGCTCGCAGCCCAGATCACCAAGACGTGTCACG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTAACAGTCTCAAATCCTaGAAAGGCAAGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLNSLKS*KGKASL
Trigger: CAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGTT...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAACAGTCTCAAATCCTaGAAAGGCAAGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPNSLKS*KGKASL
Trigger: CAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGTT...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCCCTGGAATGGCAAGTaGGTGGGCTTCATAGAAATT +
Preference number: 4 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLPWNGK*VGFIEI
Trigger: AATTTCTATGAAGCCCACTCACTTGCCATTCCAGGG...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCCTGGAATGGCAAGTaGGTGGGCTTCATAGAAATT +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGPWNGK*VGFIEI
Trigger: AATTTCTATGAAGCCCACTCACTTGCCATTCCAGGG...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGGGTTTTCTGTCTGCTTaGTGGAAAAGAAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPGFLSA*WKRRAQ
Trigger: CTGGGCTCTTCTTTTCCATCAAGCAGACAGAAAACC...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp AGAGAGGGGAGGTACCTGCCTAAGTTCACACAGCAGGGATTTAAAGCCGGGTCATGTCGTGGTTGGGGGTaGTACTGTACACGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: REGRYLPKFTQQGFKAGSCRGWG*YCTRLG
Trigger: TCCAAGACGTGTACAGTAGCACCCCCAACCACGACA...TGACCCGGCTTTAAATCCCTGCTGTGTGAACTTAGGCAGGTACCTCCCCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCATACAAGGGGCGGATATaGAAACCTCCGGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAYKGRI*KPPVLW
Trigger: CCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTA...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp ACTGCAGGGCTTATGACTGTCTCACTCTCAGCGGTGTCCCTGGCCTCTAGCCCAGGAAGTTCATTCTTCTaGCAGATAGTCTTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: TAGLMTVSLSAVSLASSPGSSFF*QIVFRL
Trigger: CAGCCGAAAGACTATCTGGCAGAAGAATGAACTTCC...TGGGCTAGAGGCCAGGGACACCGCTGAGAGTGAGACAGTCATAAGCCCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp GTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTGACAAGCTGCAAATGTaGCAGGAAAGGACTGGGTGT +
Preference number: 4 (lower is better)
Translates to: VGHGSHALMLPVKSMVLADKLQM*QERTGC
Trigger: ACACCCAGTCCTTTCCTGGCACATTTGCAGCTTGTC...AGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCCCAGTTCCCACTCACTaGGCTGAGGAAGTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVPVPTH*AEEVGV
Trigger: TACCCCAACTTCCTCAGCCCAGTGAGTGGGAACTGG...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGCTCTCCACCACCTCTaGCCGGAGGATGTAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARALHHL*PEDVVA
Trigger: AGCTACTACATCCTCCGGCCAGAGGTGGTGGAGAGC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCCCACTCCCTGTAGATaGGGTTGTGGGTCTGTCGCC +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPPTPCR*GCGSVA
Trigger: GGCGACAGACCCACAACCCCATCTACAGGGAGTGGG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACCTTTGGCCCTGGAATaGCAAGTGAGTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAPLALE*QVSGLH
Trigger: ATGAAGCCCACTCACTTGCCATTCCAGGGCCAAAGG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGTTGCTGCTCCTCCCTaGGCCTCTTCCCAATCTAAA +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPVAAPP*ASSQSK
Trigger: TTTAGATTGGGAAGAGGCCCAGGGAGGAGCAGCAAC...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
3UTR CAA 72 bp CAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTaGGCCCTGGAATGGCAAGTGAGTGGGCTTCATAGA +
Preference number: 4 (lower is better)
Translates to: QIQGADMQTSGP*ALEWQVSGLHR
Trigger: TCTATGAAGCCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
3UTR CAA 72 bp GGAAGGGCTCAACATTCTCCCGTGATTTCCGCTGTGTaGACAAGCTGCAAATGTGCCAGGAAAGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: GRAQHSPVISAV*TSCKCARKGLG
Trigger: ACCCAGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAATGTTGAGCCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGGCTCCGGAATGCGTTaGAGTCAAAGCGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARGSGMR*SQSGKG
Trigger: TCCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTTGGCTCTGGGGCTCCTaGCTCTCATCGGCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RRFWECLESPEQGTSTSCWLWGS*LSSALV
Trigger: AACGAGGGCCGATGAGAGTCAGGAGCCCCAGAGCCA...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGTGCCAGAGAGTTCAGTaGGGTGTAAGAATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPCQRVQ*GVRIPS
Trigger: ACTTGGAATTCTTACACCTCACTGAACTCTCTGGCA...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCGGGCGTATGACTCGTaGCACGTCTTGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPRAYDS*HVLVIW
Trigger: CCAGATCACCAAGACGTGTCACGAGTCATACGCCCG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp GCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTACAGGGGCTACTCCCCAGTTTTCTAGGAGTCACTaGTGTGCAATGAGCCCAATC +
Preference number: 4 (lower is better)
Translates to: ALMLPVKSMVLATGATPQFSRSH*CAMSPI
Trigger: GATTGGGCTCATTGCACATCAGTGACTCCTAGAAAA...CTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTGAGACGGCTCCGGAATaGGTTGAAGTCAAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGETAPE*VEVKAE
Trigger: TTCCGCTTTGACTTCAACGCATTCCGGAGCCGTCTC...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCGGAGTCAATGACTGTTaGCCCGCTGAGGCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPGVNDC*PAEASE
Trigger: TTCGGAGGCCTCAGCGGGGCAACAGTCATTGACTCC...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACACCTCAAACAAGGATaGTTCTCCGCTCACGTTCAG +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAHLKQG*FSAHVQ
Trigger: CTGAACGTGAGCGGAGAAGCATCCTTGTTTGAGGTG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTCACCTCAAACAAGGATaGTTCTCCGCTCACGTTCAG +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPHLKQG*FSAHVQ
Trigger: CTGAACGTGAGCGGAGAAGCATCCTTGTTTGAGGTG...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTAGAAAGAAGCTCTGCTaGTTGTTGTCGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPRKKLC*LLSWLG
Trigger: CCCCAACCACGACAACAAGCAGCAGAGCTTCTTTCT...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp AGAGAGGGGAGGTACCTGCCTAAGTTCACACAGCAGGGATTTAAAGCCGGGTCAAGAAAGAAGCTCTGCTaGTTGTTGTCGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: REGRYLPKFTQQGFKAGSRKKLC*LLSWLG
Trigger: CCCCAACCACGACAACAAGCAGCAGAGCTTCTTTCT...TGACCCGGCTTTAAATCCCTGCTGTGTGAACTTAGGCAGGTACCTCCCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp GTGGGTCATGGGAGTCACGCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTGCTAGAAAGAAGCTCTaGTGCTTGTTGTCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: VGHGSHALMLPVKSMVLAARKKL*CLLSWL
Trigger: CAACCACGACAACAAGCAGCAGAGCTTCTTTCTAGC...AGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGCGTGACTCCCATGACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCAGAGGAAAAGAAGTTaGTTGTCCGACACATCTGCT +
Preference number: 4 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGQRKRS*LSDTSA
Trigger: AGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTG...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTCTCCCGTGATTTCCGCTGTGTTGACAAGCTGCAAATGTGCCAGGAAAGGACTTTGATTTTCTCCCGCTaGGCTCGCACTTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSRDFRCVDKLQMCQERTLIFSR*ARTWLW
Trigger: CCAGAGCCAAGTGCGAGCCCAGCGGGAGAAAATCAA...AGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCCAGTTCCCACTCACTaGGCTGAGGAAGTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARPVPTH*AEEVGV
Trigger: TACCCCAACTTCCTCAGCCCAGTGAGTGGGAACTGG...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCCTCAGGCCCAAGTTTaGTGTCTGAGCGGGCGTATG +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPPQAQV*CLSGRM
Trigger: CATACGCCCGCTCAGACACCAAACTTGGGCCTGAGG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCTACTGTACACGTCTTaGATCCCAGAGAAACCGGCT +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCLLYTS*IPEKPA
Trigger: AGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAG...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCTGCTTGTTGTCGTaGTTGGGGGTGCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVCCLLS*LGVLLY
Trigger: GTACAGTAGCACCCCCAACCACGACAACAAGCAGCA...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTGGGGTCTGCCCGAGATaGGGCCTTCGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: RRFWECLESPEQGTSTSCGVCPR*GLRSQS
Trigger: GGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCC...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTTGTGTGTGCAAACACTaGGTTTTGTTTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RHICWGSARDGAFVPNPFCVCKH*VLFFRM
Trigger: CATCCTGAAAAACAAAACCCAGTGTTTGCACACACA...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTAATACAAAAATTAGCTaGGCGTGGTTGCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPNTKIS*AWLRAP
Trigger: AGGCGCCCGCAACCACGCCCAGCTAATTTTTGTATT...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR CCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTTTATCTTCTGGGTCTTaGCTTGAAGGTCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPLSSGS*LEGHLP
Trigger: GGGCAGGTGACCTTCAAGCCAAGACCCAGAAGATAA...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTGGTGGGAAAGGGGGCTaGGTTATGGGAAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGGGKGG*VMGSSF
Trigger: GAATGAACTTCCCATAACCCAGCCCCCTTTCCCACC...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCCCAGTTCCCACTTTTaGAGCTCACCACGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPPSSHF*SSPRPL
Trigger: CAAAGGGCGTGGTGAGCTTCAAAAGTGGGAACTGGG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCGTTCCCAATCCCTTTaGGAACAGTCTCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCRSQSL*EQSQIL
Trigger: CAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACG...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTCGTTCCCAATCCCTTTaGGAACAGTCTCAAATCCTG +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPRSQSL*EQSQIL
Trigger: CAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACG...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTGTCACTGATGTGCAATaGGCCCAATCATATTTCTTA +
Preference number: 4 (lower is better)
Translates to: CWGSARDGAFVPNPFENSVTDVQ*AQSYFL
Trigger: TAAGAAATATGATTGGGCTCATTGCACATCAGTGAC...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGAGACGGCTCCGGAATaGGTTGAAGTCAAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARETAPE*VEVKAE
Trigger: TTCCGCTTTGACTTCAACGCATTCCGGAGCCGTCTC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCTTGGAAGGGGTCAGATaGCTCATGGATCGGTATAAC +
Preference number: 4 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCLEGVR*LMDRYN
Trigger: GTTATACCGATCCATGAGGCATCTGACCCCTTCCAA...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS-3UTR GCA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACATTCGTTTTTCCCCATTaGATAACGCTTATAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTFVFPH*ITLIAL
Trigger: CAGAGCTATAAGCGTTATGCAATGGGGAAAAACGAA...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACCTCCATATCTGTCTTaGCCGACATCAACCAGGATT +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAPPYLS*PTSTRI
Trigger: AATCCTGGTTGATGTCGGGCAAGACAGATATGGAGG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCGCTAGAAAGAAGCTCTaGTGCTTGTTGTCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGARKKL*CLLSWL
Trigger: CAACCACGACAACAAGCAGCAGAGCTTCTTTCTAGC...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGCTAGAAAGAAGCTCTaGTGCTTGTTGTCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPARKKL*CLLSWL
Trigger: CAACCACGACAACAAGCAGCAGAGCTTCTTTCTAGC...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCTGAGCTCCTTGCTCTaGACAACAGCCCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARLSSLL*TTAPVF
Trigger: AAACACTGGGGCTGTTGTGCAGAGCAAGGAGCTCAG...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCCTACTGTACACGTCTTaGATCCCAGAGAAACCGGCT +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVLLYTS*IPEKPA
Trigger: AGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAG...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTACTGTACACGTCTTaGATCCCAGAGAAACCGGCT +
Preference number: 4 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGLLYTS*IPEKPA
Trigger: AGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAG...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGCTTGTTGTCGTGGTTaGGGGTGCTACTGTACACGT +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARACCRG*GCYCTR
Trigger: ACGTGTACAGTAGCACCCCCAACCACGACAACAAGC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCGTAGAAAGGAATGTGTaGGCCAGTGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPVERNV*ASVAMA
Trigger: GGCCATGGCCACACTGGCCCACACATTCCTTTCTAC...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTATAGTGTTTCCAGCTaGGCTCAGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVYSVSS*AQWLMP
Trigger: AGGCATGAGCCACTGAGCCCAGCTGGAAACACTATA...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR CCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCAGCACAGGTGGGTCATaGGAGTCACGCTCTCATGCT +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPSTGGS*ESRSHA
Trigger: AGCATGAGAGCGTGACTCCCATGACCCACCTGTGCT...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCCTTGCGGATGTTCCTaGCCTTTTCAGCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPPCGCS*PFQRRP
Trigger: AGGTCTTCGCTGAAAAGGTCAGGAACATCCGCAAGG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
CDS-3UTR TCA 90 bp AGCATGGTACTTGCTACAGGGGCTACTCCCCAGCAGCTCTGCTTAAGAAGATTCAACAGTCTCAAATCCTaGAAAGGCAAGGCATCCCTG +
Preference number: 4 (lower is better)
Translates to: SMVLATGATPQQLCLRRFNSLKS*KGKASL
Trigger: CAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGTT...GAATCTTCTTAAGCAGAGCTGCTGGGGAGTAGCCCCTGTAGCAAGTACCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp AGAGAGGGGAGGTACCTGCCTAAGTTCACACAGCAGGGATTTAAAGCCGGGTCAATTCTGGGAATGTCTTaGGTCTCCAGAACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: REGRYLPKFTQQGFKAGSILGMS*VSRTRN
Trigger: GTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAAT...TGACCCGGCTTTAAATCCCTGCTGTGTGAACTTAGGCAGGTACCTCCCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCTCTGCCAAGCAAACTaGATCATCCTTTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARLCQAN*IILWKG
Trigger: CCCCTTCCAAAGGATGATGCAGTTTGCTTGGCAGAG...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS-3UTR GCA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTTGTAAGAATTCCAAGTaGAGGGATCCAAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGCKNSK*RDPNSA
Trigger: GGCGGAGTTTGGATCCCTGCACTTGGAATTCTTACA...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTACAAGGGGCGGATATaGAAACCTCCGGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPYKGRI*KPPVLW
Trigger: CCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTA...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTAACTGCATCATCCTTTaGAAGGGGTCAGATGCCTCA +
Preference number: 4 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGNCIIL*KGSDAS
Trigger: TGAGGCATCTGACCCCTTCCAAAGGATGATGCAGTT...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS-3UTR CCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCGCTTGTTGTCGTGGTTaGGGGTGCTACTGTACACGT +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPACCRG*GCYCTR
Trigger: ACGTGTACAGTAGCACCCCCAACCACGACAACAAGC...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGTGCCTGTCAAGAGCATaGTACTTGCTACAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARCLSRA*YLLQGL
Trigger: TAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCA...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp GGTGTTGAACACCCAGTCTTCCAGGGAGAGCAAGTCATCTTCAGAGAACAGAAGATAAACAACTGCATCTaGAGGGCTGGCCTCATGCTT +
Preference number: 4 (lower is better)
Translates to: GVEHPVFQGEQVIFREQKINNCI*RAGLML
Trigger: AAGCATGAGGCCAGCCCTTCAGATGCAGTTGTTTAT...CTTCTGTTCTCTGAAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGTGTAAGAATTCCAAGTaGAGGGATCCAAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARCKNSK*RDPNSA
Trigger: GGCGGAGTTTGGATCCCTGCACTTGGAATTCTTACA...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACTCTGCCAAGCAAACTaGATCATCTCCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: SNTRGGYANLRSFGPGMALCQAN*IISLIF
Trigger: GAAAATCAAGGAGATGATGCAGTTTGCTTGGCAGAG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCCCCAGAGAGTGGGATaGCCAATGAGTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPPQRVG*PMSLLS
Trigger: AGAAAGAAGACTCATTGGCCATCCCACTCTCTGGGG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGTGCCAGAGAGTTCAGTaGGGTGTAAGAATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARCQRVQ*GVRIPS
Trigger: ACTTGGAATTCTTACACCTCACTGAACTCTCTGGCA...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCAGAGGAAAAGAAGTTaGTTGTCCGACACATCTGCT +
Preference number: 4 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARQRKRS*LSDTSA
Trigger: AGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTG...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCCTCTGCCAAGCAAACTaGATCATCTCCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVLCQAN*IISLIF
Trigger: GAAAATCAAGGAGATGATGCAGTTTGCTTGGCAGAG...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTGCTTGTTGTCGTGGTTaGGGGTGCTACTGTACACGT +
Preference number: 4 (lower is better)
Translates to: RRFWECLESPEQGTSTSCACCRG*GCYCTR
Trigger: ACGTGTACAGTAGCACCCCCAACCACGACAACAAGC...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCTGTGTGTGCAAACACTaGGTTTTGTTTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGCVCKH*VLFFRM
Trigger: CATCCTGAAAAACAAAACCCAGTGTTTGCACACACA...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCTGCTTAAGAAGATTCTaGGAATGTCTTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGCLRRF*ECLESP
Trigger: TGGAGACTCAAGACATTCCCAGAATCTTCTTAAGCA...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR TCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCCAGAGAGTTCAGTaGGGTGTAAGAATTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPCQRVQ*GVRIPS
Trigger: ACTTGGAATTCTTACACCTCACTGAACTCTCTGGCA...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTTTCAGTGTTAGGACCTaGGCTCCTTGCTCTGCACAA +
Preference number: 4 (lower is better)
Translates to: RRFWECLESPEQGTSTSCFSVRT*APCSAQ
Trigger: TTGTGCAGAGCAAGGAGCTCAGGTCCTAACACTGAA...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp AGCATGGTACTTGCTACAGGGGCTACTCCCCAGCAGCTCTGCTTAAGAAGATTCTTCGTTTTTCCCCATTaGATAACGCTTATAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SMVLATGATPQQLCLRRFFVFPH*ITLIAL
Trigger: CAGAGCTATAAGCGTTATGCAATGGGGAAAAACGAA...GAATCTTCTTAAGCAGAGCTGCTGGGGAGTAGCCCCTGTAGCAAGTACCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCCAGAGGAAAAGAAGTTaGTTGTCCGACACATCTGCT +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPQRKRS*LSDTSA
Trigger: AGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTG...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGTGTGTGCAAACACTaGGTTTTGTTTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVCVCKH*VLFFRM
Trigger: CATCCTGAAAAACAAAACCCAGTGTTTGCACACACA...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR TCA 90 bp GAAAATATAACAGTATTCACCCCAGAGAGTGGGATGGCCAATGAGTCTTCTTTCCAAGCATCTGCTGAATaGTGGAACAGACGGACACTC +
Preference number: 4 (lower is better)
Translates to: ENITVFTPESGMANESSFQASAE*WNRRTL
Trigger: GAGTGTCCGTCTGTTCCATCATTCAGCAGATGCTTG...GAAAGAAGACTCATTGGCCATCCCACTCTCTGGGGTGAATACTGTTATATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR GCA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTATAAGAAAACAGTGTaGATAGTAGGATACCACGGT +
Preference number: 4 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVYKKTV*IVGYHG
Trigger: ACCGTGGTATCCTACTATGCACACTGTTTTCTTATA...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTTTTTCAGCGAAGACCTaGTTGCCAGAGAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RRFWECLESPEQGTSTSCFSAKT*LPESSV
Trigger: CACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAA...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CCA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTGTGCTTAGCAGAGTATaGATTGAACAAAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGVLSRV*IEQKCR
Trigger: TCTGCATTTTTGTTCAATCCATACTCTGCTAAGCAC...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS-3UTR CCA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGTGTGTGCAAACACTaGGTTTTGTTTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPCVCKH*VLFFRM
Trigger: CATCCTGAAAAACAAAACCCAGTGTTTGCACACACA...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR GCA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTTTGAGGTTTTCTGTCTaGTTGATGGAAAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RRFWECLESPEQGTSTSCLRFSV*LMEKKS
Trigger: GCTCTTCTTTTCCATCAAGCAGACAGAAAACCTCAA...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS GCA 90 bp GCGCAGGGATGCCTGGGTCCGGAGCCGCGGCTGGGCGGCTGCAGATaGGCCCGGGAGCGCGGGCTCCCGCCCCTCGAACTCGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: AQGCLGPEPRLGGCR*ARERGLPPLELGRA
Trigger: CGCCCTGCCGAGTTCGAGGGGCGGGAGCCCGCGCTCCCGGGCGCATCTGCAGCCGCCCAGCCGCGGCTCCGGACCCAGGCATCCCTGCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374332.9
CDS CCA 90 bp GCGGGGGCCGGGTTGGGAGGCGGCTCCTGCTCGCGGGCCGGGGCATaGCCGGCGATTTCAGCCACCACTTCCAGACCAGGCTGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: AGAGLGGGSCSRAGA*PAISATTSRPGCWV
Trigger: GACCCAGCAGCCTGGTCTGGAAGTGGTGGCTGAAATCGCCGGCCATGCCCCGGCCCGCGAGCAGGAGCCGCCTCCCAACCCGGCCCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS CCA 90 bp AACTTTCTCCGCCGCGGAGAGGGCGCCGGGAGCTGGGAGCCGGAGTaGCCAGGGAGCAGGAGCAGGCACTTCCGAGCCTGCGGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: NFLRRGEGAGSWEPE*PGSRSRHFRACGGR
Trigger: CCTGCCCCCGCAGGCTCGGAAGTGCCTGCTCCTGCTCCCTGGCCACTCCGGCTCCCAGCTCCCGGCGCCCTCTCCGCGGCGGAGAAAGTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374332.9
CDS TCA 90 bp GCAGCCCCCACGGGGAGGCCGGGACGAAGCCGGGCACTTTCCTCATaGGCATCGTGGCCCGGCCGGTGGCTCCAGAAGCCCTCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: AAPTGRPGRSRALSS*ASWPGRWLQKPSES
Trigger: GGACTCCGAGGGCTTCTGGAGCCACCGGCCGGGCCACGATGCTCATGAGGAAAGTGCCCGGCTTCGTCCCGGCCTCCCCGTGGGGGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS TCA 90 bp CCCTCGTTCCCAGGACCGGGTGGCGGAGACGGCTCCGGAATGCGTTaGAGTCAAAGCGGAAAGGGACGCCCTCGTCCCCGGGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PSFPGPGGGDGSGMR*SQSGKGRPRPRAWR
Trigger: CCTCCAGGCCCGGGGACGAGGGCGTCCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCCGTCTCCGCCACCCGGTCCTGGGAACGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS GCA 90 bp ATCGGCCCTCGTTCCCAGGACCGGGTGGCGGAGACGGCTCCGGAATaGGTTGAAGTCAAAGCGGAAAGGGACGCCCTCGTCCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: IGPRSQDRVAETAPE*VEVKAERDALVPGP
Trigger: AGGCCCGGGGACGAGGGCGTCCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCCGTCTCCGCCACCCGGTCCTGGGAACGAGGGCCGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS TCA 90 bp TCCTTGATTTTCTCCCGCTGGGCTCGCACTTGGCTCTGGGGCTCCTaGCTCTCATCGGCCCTCGTTCCCAGGACCGGGTGGCGGAGACGG +
Preference number: 5 (lower is better)
Translates to: SLIFSRWARTWLWGS*LSSALVPRTGWRRR
Trigger: CCGTCTCCGCCACCCGGTCCTGGGAACGAGGGCCGATGAGAGTCAGGAGCCCCAGAGCCAAGTGCGAGCCCAGCGGGAGAAAATCAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS TCA 90 bp CCCACTGCCCTCCTGCTGATCCATGAGGGAGGACCCACTCGCCTCTaGAAACCCTGTGGCAGCCGCACGCTCATCCCTCTGCTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: PTALLLIHEGGPTRL*KPCGSRTLIPLLRR
Trigger: CCTGCGGAGCAGAGGGATGAGCGTGCGGCTGCCACAGGGTTTTCAGAGGCGAGTGGGTCCTCCCTCATGGATCAGCAGGAGGGCAGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 90 bp CCTGCCCAACACAGGGCAGCACTGGGCCAACACAGATCAGGGCCGTaGCCATGGAGCACAGCCTGCCCCAGCTGGAGCAGAAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PAQHRAALGQHRSGP*PWSTACPSWSRKRL
Trigger: CAGCCTCTTTCTGCTCCAGCTGGGGCAGGCTGTGCTCCATGGTCACGGCCCTGATCTGTGTTGGCCCAGTGCTGCCCTGTGTTGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 90 bp GGGGTGCCCCTGCCTGGACTGCTGTGTAAGGCTGCACCGGGCAGATaGACAGCTTCCCTCTTGGCCTGGGCTGGACAGAACAAGACCCTC +
Preference number: 5 (lower is better)
Translates to: GVPLPGLLCKAAPGR*TASLLAWAGQNKTL
Trigger: GAGGGTCTTGTTCTGTCCAGCCCAGGCCAAGAGGGAAGCTGTGCATCTGCCCGGTGCAGCCTTACACAGCAGTCCAGGCAGGGGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487493.1
CDS-3UTR CAA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCTCTCCCACCCAGGCCTaGGCCTCCTGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLVRHICWGSARDGAFVPSPTQA*ASWNSS
Trigger: GGAGGAGTTCCAGGAGGCCAAGGCCTGGGTGGGAGA...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCGAGGCCGGGATGCTATaGCCCCGGGCCGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGEAGML*PRAAVA
Trigger: GGCCACGGCGGCCCGGGGCAATAGCATCCCGGCCTC...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGTCTCCCACCCAGGCCTaGGCCTCCTGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: GADMQTSGPLALEWQVSGSPTQA*ASWNSS
Trigger: GGAGGAGTTCCAGGAGGCCAAGGCCTGGGTGGGAGA...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS CCA 90 bp GTTGTGGGTCTGTCGCCACAGGTACATGTAGCTCTCCACCACCTCTaGCCGGAGGATGTAGTAGCTCTCGCTCAGCTGGGTGGCCACGGC +
Preference number: 5 (lower is better)
Translates to: VVGLSPQVHVALHHL*PEDVVALAQLGGHG
Trigger: GCCGTGGCCACCCAGCTGAGCGAGAGCTACTACATCCTCCGGCCAGAGGTGGTGGAGAGCTACATGTACCTGTGGCGACAGACCCACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000487493.1
ENST00000611903.4
CDS-3UTR CAA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCGAGGCCGGGATGCTATaGCCCCGGGCCGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVEAGML*PRAAVA
Trigger: GGCCACGGCGGCCCGGGGCAATAGCATCCCGGCCTC...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTGAGGCCGGGATGCTATaGCCCCGGGCCGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGEAGML*PRAAVA
Trigger: GGCCACGGCGGCCCGGGGCAATAGCATCCCGGCCTC...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTATTCCCGTGGGGGTGTaGAACGCCGGCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: RHICWGSARDGAFVPNPFIPVGV*NAGRSF
Trigger: GAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAAT...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS GCA 90 bp GGGGAAACAGCCAAGCAGAGGGCCCAGGTCAGACCTCCCACCTCCTaGTTTTCGGGATCCAGGAGAGATGTCAGTTGCCTTGAACCCGCG +
Preference number: 5 (lower is better)
Translates to: GETAKQRAQVRPPTS*FSGSRRDVSCLEPA
Trigger: CGCGGGTTCAAGGCAACTGACATCTCTCCTGGATCCCGAAAAGCAGGAGGTGGGAGGTCTGACCTGGGCCCTCTGCTTGGCTGTTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487493.1
CDS CCA 90 bp CTGTGGCAGCCGCACGCTCATCCCTCTGCTCCGCAGGAAGAAGGGTaGGGAGGAGACTTGCCTTTTCAGCGAAGACCTGGTTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: LWQPHAHPSAPQEEG*GGDLPFQRRPGCQR
Trigger: TCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAAGTCTCCTCCCCACCCTTCTTCCTGCGGAGCAGAGGGATGAGCGTGCGGCTGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCCGGCTCCGGAATGCGTaGAAGTCAAAGCGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LLVRHICWGSARDGAFVPRLRNA*KSKRKG
Trigger: CCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCCG...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAATTCCCGTGGGGGTGTaGAACGCCGGCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSIPVGV*NAGRSF
Trigger: GAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAAT...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGCCCCAGTTCCCACTTTaGAAGCTCACCACGCCCTTT +
Preference number: 5 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAPQFPL*KLTTPF
Trigger: AAAGGGCGTGGTGAGCTTCAAAAGTGGGAACTGGGG...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGCCTCAGGCCCAAGTTaGGTGTCTGAGCGGGCGTAT +
Preference number: 5 (lower is better)
Translates to: RHICWGSARDGAFVPNPFASGPS*VSERAY
Trigger: ATACGCCCGCTCAGACACCAAACTTGGGCCTGAGGC...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTGGGTGGGCCTCGGTGTaGAACACCCAGTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CWGSARDGAFVPNPFENSGWASV*NTQSSR
Trigger: CCTGGAAGACTGGGTGTTCAACACCGAGGCCCACCC...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAGGGTGGGCCTCGGTGTaGAACACCCAGTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSGWASV*NTQSSR
Trigger: CCTGGAAGACTGGGTGTTCAACACCGAGGCCCACCC...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS CCA 90 bp TCTGCCGGAGTTAAACCAGAAGGCCTCAGGCCCAAGTTTGGTGTCTaGGGAAACAGCCAAGCAGAGGGCCCAGGTCAGACCTCCCACCTC +
Preference number: 5 (lower is better)
Translates to: SAGVKPEGLRPKFGV*GNSQAEGPGQTSHL
Trigger: GAGGTGGGAGGTCTGACCTGGGCCCTCTGCTTGGCTGTTTCCCCAGACACCAAACTTGGGCCTGAGGCCTTCTGGTTTAACTCCGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487493.1
CDS-3UTR CAA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGATTCCCGTGGGGGTGTaGAACGCCGGCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGIPVGV*NAGRSF
Trigger: GAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAAT...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTCAAACCTCCGGTCCTTaGGCCCTGGAATGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: RHICWGSARDGAFVPNPFQTSGP*ALEWQV
Trigger: CACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTG...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGGGTCCCTGGGCAGGGTaGCCAACCCTGAGAGTTTCG +
Preference number: 5 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPGPWAG*PTLRVS
Trigger: CGAAACTCTCAGGGTTGGCAACCCTGCCCAGGGACC...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS CCA 90 bp TGGCAGCCACCCTTGGGGGTGCCAGCCCACAGTCTAGCTGCACTCTaGGCTCTGATACATCAGCCAAAGCATAGACACCAAGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: WQPPLGVPAHSLAAL*ALIHQPKHRHQAGG
Trigger: ACCACCTGCTTGGTGTCTATGCTTTGGCTGATGTATCAGAGCCCAGAGTGCAGCTAGACTGTGGGCTGGCACCCCCAAGGGTGGCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496532.5
CDS-3UTR CAA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTTCAGCGAAGACCTGGTaGCCAGAGAGTTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: RHICWGSARDGAFVPNPFSAKTW*PESSVR
Trigger: CCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGA...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCGCCTCCATATCTGTCTaGCCCGACATCAACCAGGAT +
Preference number: 5 (lower is better)
Translates to: LLVRHICWGSARDGAFVPASISV*PDINQD
Trigger: ATCCTGGTTGATGTCGGGCAAGACAGATATGGAGGC...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGGCTACTGTACACGTCTaGGATCCCAGAGAAACCGGC +
Preference number: 5 (lower is better)
Translates to: GADMQTSGPLALEWQVSGATVHV*DPRETG
Trigger: GCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAGC...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGAGGAAAAGAAGTTGCTaGTCCGACACATCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TVSNPEKARHPCGGPRAARKRSC*SDTSAG
Trigger: CCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GCTCTCATGCTGCCTGTCAAGAGCATGGTACTTGCTACAGGGGCTACTCCCCAGCGAAGTTCAGGGAGTTaGGAGCGAGTCCTCCCGCGA +
Preference number: 5 (lower is better)
Translates to: ALMLPVKSMVLATGATPQRSSGS*ERVLPR
Trigger: TCGCGGGAGGACTCGCTCCAAACTCCCTGAACTTCG...CTGGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGACAGGCAGCATGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS TCA 90 bp TTTCTCCAAGGCCTGAGCGGGCGTATGACTCGTGACACGTCTTGGTaGTCTGGGCTGCGAGCTCTCGGTAGTGGGCCCTCTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: FLQGLSGRMTRDTSW*SGLRALGSGPSFLP
Trigger: AGGAAGAAAAGAGGGCCCACTACCGAGAGCTCGCAGCCCAGATCACCAAGACGTGTCACGAGTCATACGCCCGCTCAGGCCTTGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496532.5
CDS GCA 90 bp ACGCTCATCCCTCTGCTCCGCAGGAAGAAGGGTGGGGAGGAGACTTaGCTTTTCAGCGAAGACCTGGTTGCCAGAGAGTTCAGTGAGGTG +
Preference number: 5 (lower is better)
Translates to: TLIPLLRRKKGGEET*LFSEDLVAREFSEV
Trigger: CACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAAGTCTCCTCCCCACCCTTCTTCCTGCGGAGCAGAGGGATGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp GGGTGCTCAGGCAGGGGTAGCTATTACTCCAGAATAACCAGGGACTaGAGTGAGCTCCCTGTCCCACTCCATTCGGAGCTGGTCAGAACC +
Preference number: 5 (lower is better)
Translates to: GCSGRGSYYSRITRD*SELPVPLHSELVRT
Trigger: GGTTCTGACCAGCTCCGAATGGAGTGGGACAGGGAGCTCACTCCAGTCCCTGGTTATTCTGGAGTAATAGCTACCCCTGCCTGAGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTTCTCCCACCCAGGCCTaGGCCTCCTGGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGSPTQA*ASWNSS
Trigger: GGAGGAGTTCCAGGAGGCCAAGGCCTGGGTGGGAGA...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACACCCCAGTTCCCACTTTaGAAGCTCACCACGCCCTTT +
Preference number: 5 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTPQFPL*KLTTPF
Trigger: AAAGGGCGTGGTGAGCTTCAAAAGTGGGAACTGGGG...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGCCTCCATATCTGTCTaGCCCGACATCAACCAGGAT +
Preference number: 5 (lower is better)
Translates to: RHICWGSARDGAFVPNPFASISV*PDINQD
Trigger: ATCCTGGTTGATGTCGGGCAAGACAGATATGGAGGC...AAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGCTACTGTACACGTCTaGGATCCCAGAGAAACCGGC +
Preference number: 5 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTATVHV*DPRETG
Trigger: GCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAGC...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTGCTACTGTACACGTCTaGGATCCCAGAGAAACCGGC +
Preference number: 5 (lower is better)
Translates to: CWGSARDGAFVPNPFENSATVHV*DPRETG
Trigger: GCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAGC...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACATGCTTGTTGTCGTGGTaGGGGGTGCTACTGTACACG +
Preference number: 5 (lower is better)
Translates to: SAGGLPEMGPSFPIPLRTCLLSW*GVLLYT
Trigger: CGTGTACAGTAGCACCCCCAACCACGACAACAAGCA...TGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AGAGAGGGGAGGTACCTGCCTAAGTTCACACAGCAGGGATTTAAAGCCGGGTCAGGGTGGGCCTCGGTGTaGAACACCCAGTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: REGRYLPKFTQQGFKAGSGWASV*NTQSSR
Trigger: CCTGGAAGACTGGGTGTTCAACACCGAGGCCCACCC...TGACCCGGCTTTAAATCCCTGCTGTGTGAACTTAGGCAGGTACCTCCCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAGGAAAAGAAGTTGCTaGTCCGACACATCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LLVRHICWGSARDGAFVPRKRSC*SDTSAG
Trigger: CCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCAAACCTCCGGTCCTTaGGCCCTGGAATGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGQTSGP*ALEWQV
Trigger: CACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTG...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGGTCCCTGGGCAGGGTaGCCAACCCTGAGAGTTTCG +
Preference number: 5 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPGPWAG*PTLRVS
Trigger: CGAAACTCTCAGGGTTGGCAACCCTGCCCAGGGACC...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS TCA 90 bp CAAGTTTGGTGTCTGAGCGGGCGTATGACTCGTGACACGTCTTGGTaGTCTGGGCTGCGAGCTCTCGGTAGTGGGCCCTCTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QVWCLSGRMTRDTSW*SGLRALGSGPSFLP
Trigger: AGGAAGAAAAGAGGGCCCACTACCGAGAGCTCGCAGCCCAGATCACCAAGACGTGTCACGAGTCATACGCCCGCTCAGACACCAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000611903.4
CDS TCA 90 bp CAGCCCTCAGGGAGGGACTGTAGCTGCTGGAGCCTGAGTGCCATATaGGGGAGGTGTGAGCACTTCCCTTCTTTGGATTTGAGGTCAGAC +
Preference number: 5 (lower is better)
Translates to: QPSGRDCSCWSLSAI*GRCEHFPSLDLRSD
Trigger: GTCTGACCTCAAATCCAAAGAAGGGAAGTGCTCACACCTCCCTCATATGGCACTCAGGCTCCAGCAGCTACAGTCCCTCCCTGAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGCCTCGTAGCCATCTTTaGTTAGTGGACGGAGTTCGT +
Preference number: 5 (lower is better)
Translates to: GADMQTSGPLALEWQVSGPRSHL*LVDGVR
Trigger: ACGAACTCCGTCCACTAACAAAAGATGGCTACGAGG...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCATTCCCGTGGGGGTGTaGAACGCCGGCAGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVIPVGV*NAGRSF
Trigger: GAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAAT...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGCCCCAGTTCCCACTTTaGAAGCTCACCACGCCCTTT +
Preference number: 5 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPPQFPL*KLTTPF
Trigger: AAAGGGCGTGGTGAGCTTCAAAAGTGGGAACTGGGG...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTTCAGCGAAGACCTGGTaGCCAGAGAGTTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLSAKTW*PESSVR
Trigger: CCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGA...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAGCCTCCATATCTGTCTaGCCCGACATCAACCAGGAT +
Preference number: 5 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSASISV*PDINQD
Trigger: ATCCTGGTTGATGTCGGGCAAGACAGATATGGAGGC...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGTGCTTGTTGTCGTGGTaGGGGGTGCTACTGTACACG +
Preference number: 5 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGCLLSW*GVLLYT
Trigger: CGTGTACAGTAGCACCCCCAACCACGACAACAAGCA...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTTGCTTGTTGTCGTGGTaGGGGGTGCTACTGTACACG +
Preference number: 5 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLCLLSW*GVLLYT
Trigger: CGTGTACAGTAGCACCCCCAACCACGACAACAAGCA...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTAAGAAGCTCTGCTGCTaGTTGTCGTGGTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLKKLCC*LSWLGV
Trigger: CACCCCCAACCACGACAACAAGCAGCAGAGCTTCTT...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTGGGTGGGCCTCGGTGTaGAACACCCAGTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGGWASV*NTQSSR
Trigger: CCTGGAAGACTGGGTGTTCAACACCGAGGCCCACCC...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGAGGAAAAGAAGTTGCTaGTCCGACACATCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GADMQTSGPLALEWQVSGRKRSC*SDTSAG
Trigger: CCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CTTGCTCTGCACAACAGCCCCAGTGTTTCAGGCCCCCTCCCAGGGAGGGCATCACTGAGTCTCCAAGTCTaGTCTCCTCACAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LALHNSPSVSGPLPGRASLSLQV*SPHRGK
Trigger: TTTTCCTCTGTGAGGAGACAAGACTTGGAGACTCAG...TGATGCCCTCCCTGGGAGGGGGCCTGAAACACTGGGGCTGTTGTGCAGAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCCGAAGTTCAGGGAGTTaGGAGCGAGTCCTCCCGCGA +
Preference number: 5 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGRSSGS*ERVLPR
Trigger: TCGCGGGAGGACTCGCTCCAAACTCCCTGAACTTCG...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGAACTGCATCATCTCCTaGATTTTCTCCCGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GADMQTSGPLALEWQVSGNCIIS*IFSRWA
Trigger: AGCCCAGCGGGAGAAAATCAAGGAGATGATGCAGTT...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS TCA 90 bp TGGAAGGAGCCAGCACATCCTGGGCTTGAATCACGGCTTTATCACTaGCCAGCTGGAAGGCCCAGGGCAAGTGACTTGACCTCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: WKEPAHPGLESRLYH*PAGRPRASDLTSLS
Trigger: ACTCAGAGAGGTCAAGTCACTTGCCCTGGGCCTTCCAGCTGGTCAGTGATAAAGCCGTGATTCAAGCCCAGGATGTGCTGGCTCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 90 bp CTGCTCTATCAATCTGGTCTGGAAGGAGCCAGCACATCCTGGGCTTaGATCACGGCTTTATCACTGACCAGCTGGAAGGCCCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: LLYQSGLEGASTSWA*ITALSLTSWKAQGK
Trigger: CTTGCCCTGGGCCTTCCAGCTGGTCAGTGATAAAGCCGTGATTCAAGCCCAGGATGTGCTGGCTCCTTCCAGACCAGATTGATAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 90 bp ACACTGTCTCATGTTGATAGAGTTATGTGTGTACGGGGCCGGGAGTaGGGGAGAGCCACCTTTCTGCAGGCAGACCTTCCTTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TLSHVDRVMCVRGRE*GRATFLQADLPFQV
Trigger: CACCTGGAAAGGAAGGTCTGCCTGCAGAAAGGTGGCTCTCCCGCACTCCCGGCCCCGTACACACATAACTCTATCAACATGAGACAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 90 bp CATGGAGCACAGCCTGCCCCAGCTGGAGCAGAAAGAGGCTGGGTTTaGAACCTTTGGGGCTATGAAGGTGAGAAGTGGAATTCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: HGAQPAPAGAERGWV*NLWGYEGEKWNSRG
Trigger: CCCTCTTGAATTCCACTTCTCACCTTCATAGCCCCAAAGGTTGCAAACCCAGCCTCTTTCTGCTCCAGCTGGGGCAGGCTGTGCTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAGACCGCTGTGTCTCCTaGATTTTCTCCCGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SNTRGGYANLRSFGPGMADRCVS*IFSRWA
Trigger: AGCCCAGCGGGAGAAAATCAAGGAGACACAGCGGTC...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS-3UTR CAA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTAAACTGCATCATCCTTaGGAAGGGGTCAGATGCCTC +
Preference number: 5 (lower is better)
Translates to: CWGSARDGAFVPNPFENSKLHHP*EGVRCL
Trigger: GAGGCATCTGACCCCTTCCAAAGGATGATGCAGTTT...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS-3UTR CAA 90 bp ACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCTGCGGCGGCCCCAGGGCGGCGGTTCGTTTTTCCCCATaGCATAACGCTTATAGCTCT +
Preference number: 5 (lower is better)
Translates to: TVSNPEKARHPCGGPRAAVRFSP*HNAYSS
Trigger: AGAGCTATAAGCGTTATGCAATGGGGAAAAACGAAC...CGCCGCCCTGGGGCCGCCGCAGGGATGCCTTGCCTTTTCAGGATTTGAGACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAATCTTCCTGAGGACCTaGCGGATGTTCCTGACCTTT +
Preference number: 5 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSIFLRT*RMFLTF
Trigger: AAAGGTCAGGAACATCCGCAAGGTCCTCAGGAAGAT...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
CDS-3UTR CAA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTGCCTCAGGCCCAAGTTaGGTGTCTGAGCGGGCGTAT +
Preference number: 5 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGASGPS*VSERAY
Trigger: ATACGCCCGCTCAGACACCAAACTTGGGCCTGAGGC...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTCAAACCTCCGGTCCTTaGGCCCTGGAATGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPQTSGP*ALEWQV
Trigger: CACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTG...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGTGTTGAACACCCAGTCTTCCAGGGAGAGCAAGTCATCTTCAGAGAACAGAAGGTGACCTCAGGCAAGTaGCTGCTCCTCCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GVEHPVFQGEQVIFREQKVTSGK*LLLPGP
Trigger: AGGCCCAGGGAGGAGCAGCAACTTGCCTGAGGTCAC...CTTCTGTTCTCTGAAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTCTTCTGGGTCTTGGCTaGAAGGTCACCTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPLLGLG*KVTCPE
Trigger: CTCTGGGCAGGTGACCTTCAAGCCAAGACCCAGAAG...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS GCA 90 bp AAGACCTGGTTGCCAGAGAGTTCAGTGAGGTGTAAGAATTCCAAGTaGAGGGATCCAAACTCCGCCAAGATGCTGCTGCTGCCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KTWLPESSVRCKNSK*RDPNSAKMLLLPAV
Trigger: CACAGCCGGCAGCAGCAGCATCTTGGCGGAGTTTGGATCCCTGCACTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000473891.1
ENST00000611903.4
CDS GCA 90 bp GAGACAGAGATAGACGGATGGACTCCAGAGCAAAAGCCTGCAGCCTaGTCTATCAATCTGGTCTGGAAGGAGCCAGCACATCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: ETEIDGWTPEQKPAA*SINLVWKEPAHPGL
Trigger: AAGCCCAGGATGTGCTGGCTCCTTCCAGACCAGATTGATAGAGCAGGCTGCAGGCTTTTGCTCTGGAGTCCATCCGTCTATCTCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp GTAGCTGTGGGAATCTATCATCTCCCAGTTGCCTGCTGGGAGCCGTaGCATAGAGGTGGGAATCTATCAGTCATCTCCCAGCTCCCATAC +
Preference number: 5 (lower is better)
Translates to: VAVGIYHLPVACWEP*HRGGNLSVISQLPY
Trigger: GTATGGGAGCTGGGAGATGACTGATAGATTCCCACCTCTATGCCACGGCTCCCAGCAGGCAACTGGGAGATGATAGATTCCCACAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp ACGGATGGACTCCAGAGCAAAAGCCTGCAGCCTGCTCTATCAATCTaGTCTGGAAGGAGCCAGCACATCCTGGGCTTGAATCACGGCTTT +
Preference number: 5 (lower is better)
Translates to: TDGLQSKSLQPALSI*SGRSQHILGLNHGF
Trigger: AAAGCCGTGATTCAAGCCCAGGATGTGCTGGCTCCTTCCAGACCAGATTGATAGAGCAGGCTGCAGGCTTTTGCTCTGGAGTCCATCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCGGCTCCGGAATGCGTaGAAGTCAAAGCGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGRLRNA*KSKRKG
Trigger: CCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCCG...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACCCCAGTTCCCACTTTaGAAGCTCACCACGCCCTTT +
Preference number: 5 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAPQFPL*KLTTPF
Trigger: AAAGGGCGTGGTGAGCTTCAAAAGTGGGAACTGGGG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTATCTTCCTGAGGACCTaGCGGATGTTCCTGACCTTT +
Preference number: 5 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLIFLRT*RMFLTF
Trigger: AAAGGTCAGGAACATCCGCAAGGTCCTCAGGAAGAT...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
CDS-3UTR CAA 90 bp AGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGATCTTCCTGAGGACCTaGCGGATGTTCCTGACCTTT +
Preference number: 5 (lower is better)
Translates to: RKRSCLSDTSAGGLPEMGIFLRT*RMFLTF
Trigger: AAAGGTCAGGAACATCCGCAAGGTCCTCAGGAAGAT...CCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
CDS-3UTR CAA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGGCCTCAGGCCCAAGTTaGGTGTCTGAGCGGGCGTAT +
Preference number: 5 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARASGPS*VSERAY
Trigger: ATACGCCCGCTCAGACACCAAACTTGGGCCTGAGGC...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TTCTCCCGTGATTTCCGCTGTGTTGACAAGCTGCAAATGTGCCAGGAAAGGACTGCCTCAGGCCCAAGTTaGGTGTCTGAGCGGGCGTAT +
Preference number: 5 (lower is better)
Translates to: FSRDFRCVDKLQMCQERTASGPS*VSERAY
Trigger: ATACGCCCGCTCAGACACCAAACTTGGGCCTGAGGC...AGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCTGCTTGTTGTCGTGGTaGGGGGTGCTACTGTACACG +
Preference number: 5 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGCLLSW*GVLLYT
Trigger: CGTGTACAGTAGCACCCCCAACCACGACAACAAGCA...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGAAGCTCTGCTGCTaGTTGTCGTGGTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGKKLCC*LSWLGV
Trigger: CACCCCCAACCACGACAACAAGCAGCAGAGCTTCTT...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAAGTGAGTGGGTCGTTCCCAATCCCTTaGAGAACAGTCTCAAATCCT +
Preference number: 5 (lower is better)
Translates to: GADMQTSGPLALEWQVSGSFPIP*RTVSNP
Trigger: AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA...CCCACTCACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCACTGAGTCTCCAAGTCTaGTCTCCTCACAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: GGLPEMGPSFPIPLRTVSLSLQV*SPHRGK
Trigger: TTTTCCTCTGTGAGGAGACAAGACTTGGAGACTCAG...TGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCCAAACCTCCGGTCCTTaGGCCCTGGAATGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LSPHRGKEVACPTHLLGVQTSGP*ALEWQV
Trigger: CACTTGCCATTCCAGGGCCAAAGGACCGGAGGTTTG...GACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGGTGATTTCCGCTGTGTaGACAAGCTGCAAATGTGCC +
Preference number: 5 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPVISAV*TSCKCA
Trigger: GGCACATTTGCAGCTTGTCAACACAGCGGAAATCAC...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS TCA 90 bp CTGATTGGTGTTCTAAGCTCCCCATGTGGCCTTAAACAGCAGGAATaGACAGTCAGGGCATCTGCCATGGCAGGGTATTGCCATGCCAGC +
Preference number: 5 (lower is better)
Translates to: LIGVLSSPCGLKQQE*TVRASAMAGYCHAS
Trigger: GCTGGCATGGCAATACCCTGCCATGGCAGATGCCCTGACTGTTCATTCCTGCTGTTTAAGGCCACATGGGGAGCTTAGAACACCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 90 bp GACCCACCTCATAGGGTTGTTGGGAAGAGTAGAGCCATTATAAAGTaGCCAGCACATAGCGGGTGCTCAGGCAGGGGTAGCTATTACTCC +
Preference number: 5 (lower is better)
Translates to: DPPHRVVGKSRAIIK*PAHSGCSGRGSYYS
Trigger: GGAGTAATAGCTACCCCTGCCTGAGCACCCGCTATGTGCTGGGCACTTTATAATGGCTCTACTCTTCCCAACAACCCTATGAGGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp GCAGGAAGAAGGGTGGGGAGGAGACTTGCCTTTTCAGCGAAGACCTaGTTGCCAGAGAGTTCAGTGAGGTGTAAGAATTCCAAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: AGRRVGRRLAFSAKT*LPESSVRCKNSKCR
Trigger: CCTGCACTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAAGTCTCCTCCCCACCCTTCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp TGGACTCCAGAGCAAAAGCCTGCAGCCTGCTCTATCAATCTGGTCTaGAAGGAGCCAGCACATCCTGGGCTTGAATCACGGCTTTATCAC +
Preference number: 5 (lower is better)
Translates to: WTPEQKPAACSINLV*KEPAHPGLESRLYH
Trigger: GTGATAAAGCCGTGATTCAAGCCCAGGATGTGCTGGCTCCTTCCAGACCAGATTGATAGAGCAGGCTGCAGGCTTTTGCTCTGGAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTTCAGCGAAGACCTGGTaGCCAGAGAGTTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGSAKTW*PESSVR
Trigger: CCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGA...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AGCATGGTACTTGCTACAGGGGCTACTCCCCAGCAGCTCTGCTTAAGAAGATTCTCAGCGAAGACCTGGTaGCCAGAGAGTTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: SMVLATGATPQQLCLRRFSAKTW*PESSVR
Trigger: CCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGA...GAATCTTCTTAAGCAGAGCTGCTGGGGAGTAGCCCCTGTAGCAAGTACCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp TGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTTCGTTCCCAATCCCTTaGAGAACAGTCTCAAATCCT +
Preference number: 5 (lower is better)
Translates to: CWGSARDGAFVPNPFENSSFPIP*RTVSNP
Trigger: AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA...ACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTACAGAGGAAAAGAAGTaGCTTGTCCGACACATCTGC +
Preference number: 5 (lower is better)
Translates to: KEVACPTHLLGVCPRWGLTEEKK*LVRHIC
Trigger: GCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGT...AAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAACGGGGTCAAGATTTaGTGTGTGTGCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: PHRGKEVACPTHLLGVCPNGVKI*CVCKHW
Trigger: CCAGTGTTTGCACACACACAAAATCTTGACCCCGTT...CGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TTGCTTGTCCGACACATCTGCTGGGGGTCTGCCCGAGATGGGGCCTTCGTTCCCGTAAATGACACAAAGTaGAACATAGGGTCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: LLVRHICWGSARDGAFVPVNDTK*NIGSVL
Trigger: CAACACTGACCCTATGTTCAACTTTGTGTCATTTAC...GGGAACGAAGGCCCCATCTCGGGCAGACCCCCAGCAGATGTGTCGGACAAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGTGTTGAACACCCAGTCTTCCAGGGAGAGCAAGTCATCTTCAGAGAACAGAAGCCAGTGTCTGGTCCGTaGCAGGCACTCACCAAGCAT +
Preference number: 5 (lower is better)
Translates to: GVEHPVFQGEQVIFREQKPVSGP*QALTKH
Trigger: ATGCTTGGTGAGTGCCTGCAACGGACCAGACACTGG...CTTCTGTTCTCTGAAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS CCA 90 bp TTAGTGTCTCCGCTAGAAAGAAGCTCTGCTGCTTGTTGTCGTGGTTaGGGGTGCTACTGTACACGTCTTGGATCCCAGAGAAACCGGCTT +
Preference number: 5 (lower is better)
Translates to: LVSPLERSSAACCRG*GCYCTRLGSQRNRL
Trigger: AAGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAGCACCCCCAACCACGACAACAAGCAGCAGAGCTTCTTTCTAGCGGAGACACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000487493.1
ENST00000496532.5
ENST00000611903.4
CDS CCA 90 bp GTGGTTAAATCCTACTCAGCACGTCCTAGCCAGCACAAGACCCCTTaGGAGAGAAAGGCCCTTGGGACCACACTGTCTCATGTTGATAGA +
Preference number: 5 (lower is better)
Translates to: VVKSYSARPSQHKTP*ERKALGTTLSHVDR
Trigger: TCTATCAACATGAGACAGTGTGGTCCCAAGGGCCTTTCTCTCCCAAGGGGTCTTGTGCTGGCTAGGACGTGCTGAGTAGGATTTAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp CAGCCTGCCCCAGCTGGAGCAGAAAGAGGCTGGGTTTGCAACCTTTaGGGCTATGAAGGTGAGAAGTGGAATTCAAGAGGGCTTTATCTA +
Preference number: 5 (lower is better)
Translates to: QPAPAGAERGWVCNL*GYEGEKWNSRGLYL
Trigger: TAGATAAAGCCCTCTTGAATTCCACTTCTCACCTTCATAGCCCCAAAGGTTGCAAACCCAGCCTCTTTCTGCTCCAGCTGGGGCAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACCTCGTAGCCATCTTTaGTTAGTGGACGGAGTTCGT +
Preference number: 5 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAPRSHL*LVDGVR
Trigger: ACGAACTCCGTCCACTAACAAAAGATGGCTACGAGG...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGAAGAAGCTCTGCTGCTaGTTGTCGTGGTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARKKLCC*LSWLGV
Trigger: CACCCCCAACCACGACAACAAGCAGCAGAGCTTCTT...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TTCTCCCGTGATTTCCGCTGTGTTGACAAGCTGCAAATGTGCCAGGAAAGGACTAAGAAGCTCTGCTGCTaGTTGTCGTGGTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: FSRDFRCVDKLQMCQERTKKLCC*LSWLGV
Trigger: CACCCCCAACCACGACAACAAGCAGCAGAGCTTCTT...AGTCCTTTCCTGGCACATTTGCAGCTTGTCAACACAGCGGAAATCACGGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS TCA 90 bp GGAGACTTGCCTTTTCAGCGAAGACCTGGTTGCCAGAGAGTTCAGTaGGGTGTAAGAATTCCAAGTGCAGGGATCCAAACTCCGCCAAGA +
Preference number: 5 (lower is better)
Translates to: GDLPFQRRPGCQRVQ*GVRIPSAGIQTPPR
Trigger: TCTTGGCGGAGTTTGGATCCCTGCACTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAAGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 90 bp AGTGCGGGAGAGCCACCTTTCTGCAGGCAGACCTTCCTTTCCAGGTaGCAGCACTTGGCTTTGCCACGTCAGATTTCATATCCATTTATG +
Preference number: 5 (lower is better)
Translates to: SAGEPPFCRQTFLSR*QHLALPRQISYPFM
Trigger: CATAAATGGATATGAAATCTGACGTGGCAAAGCCAAGTGCTGTCACCTGGAAAGGAAGGTCTGCCTGCAGAAAGGTGGCTCTCCCGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 90 bp GGCCACCTGGTCCTTAAGTGGCAGAGCCAGGACGTGAATGAATTCTaGCAACATAAACCATACATATTCCTGCCCAACACAGGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GHLVLKWQSQDVNEF*QHKPYIFLPNTGQH
Trigger: GTGCTGCCCTGTGTTGGGCAGGAATATGTATGGTTTATGTTGTCAGAATTCATTCACGTCCTGGCTCTGCCACTTAAGGACCAGGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 90 bp GGGTGGCCAATTCCTGCCAATGCAAGGTGGTGCCTAGATTTCAGTTaGACTTTCTCCAGATTTCACATATGGGTGGTTGCCACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GWPIPANARWCLDFS*TFSRFHIWVVATEL
Trigger: GAGCTCAGTGGCAACCACCCATATGTGAAATCTGGAGAAAGTGCAACTGAAATCTAGGCACCACCTTGCATTGGCAGGAATTGGCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 90 bp GGGGACTTCTGCAGTGGGTGGCCAATTCCTGCCAATGCAAGGTGGTaGCTAGATTTCAGTTGCACTTTCTCCAGATTTCACATATGGGTG +
Preference number: 5 (lower is better)
Translates to: GDFCSGWPIPANARW*LDFSCTFSRFHIWV
Trigger: CACCCATATGTGAAATCTGGAGAAAGTGCAACTGAAATCTAGGCACCACCTTGCATTGGCAGGAATTGGCCACCCACTGCAGAAGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp TGCCAAGCAAACTGCATCATCCTTTGGAAGGGGTCAGATGCCTCATaGATCGGTATAACAGCCTGGGGTCCTCTAGGACCACATACACAA +
Preference number: 5 (lower is better)
Translates to: CQANCIILWKGSDAS*IGITAWGPLGPHTQ
Trigger: TTGTGTATGTGGTCCTAGAGGACCCCAGGCTGTTATACCGATCCATGAGGCATCTGACCCCTTCCAAAGGATGATGCAGTTTGCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS CCA 90 bp AGGACCTTGCGGATGTTCCTGACTGTTGCCTTTTCAGCGAAGACCTaGTTGCCAGAGAGTTCAGTGAGGTGTAAGAATTCCAAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RTLRMFLTVAFSAKT*LPESSVRCKNSKCR
Trigger: CCTGCACTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAACAGTCAGGAACATCCGCAAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp GGTGTTGAACACCCAGTCTTCCAGGGAGAGCAAGTCATCTTCAGAGAACAGAAGGCCTCCATATCTGTCTaGCCCGACATCAACCAGGAT +
Preference number: 5 (lower is better)
Translates to: GVEHPVFQGEQVIFREQKASISV*PDINQD
Trigger: ATCCTGGTTGATGTCGGGCAAGACAGATATGGAGGC...CTTCTGTTCTCTGAAGATGACTTGCTCTCCCTGGAAGACTGGGTGTTCAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAACAGAGGAAAAGAAGTaGCTTGTCCGACACATCTGC +
Preference number: 5 (lower is better)
Translates to: SNTRGGYANLRSFGPGMATEEKK*LVRHIC
Trigger: GCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGT...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTACAGAGGAAAAGAAGTaGCTTGTCCGACACATCTGC +
Preference number: 5 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPTEEKK*LVRHIC
Trigger: GCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGT...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCACAGAGGAAAAGAAGTaGCTTGTCCGACACATCTGC +
Preference number: 5 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGTEEKK*LVRHIC
Trigger: GCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGT...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCCTGAGTCTCCAAGTCTaGTCTCCTCACAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCLSLQV*SPHRGK
Trigger: TTTTCCTCTGTGAGGAGACAAGACTTGGAGACTCAG...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp CTGCCCGAGATGGGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTCTGAGTCTCCAAGTCTaGTCTCCTCACAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LPEMGPSFPIPLRTVSNPLSLQV*SPHRGK
Trigger: TTTTCCTCTGTGAGGAGACAAGACTTGGAGACTCAG...AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCCCATCTCGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTCTGCAACGGGGTCAAGATTTaGTGTGTGTGCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: SPHRGKEVACPTHLLGVCNGVKI*CVCKHW
Trigger: CCAGTGTTTGCACACACACAAAATCTTGACCCCGTT...GCAGACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp AGCATGGTACTTGCTACAGGGGCTACTCCCCAGCAGCTCTGCTTAAGAAGATTCATCTTCCTGAGGACCTaGCGGATGTTCCTGACTGTT +
Preference number: 5 (lower is better)
Translates to: SMVLATGATPQQLCLRRFIFLRT*RMFLTV
Trigger: AACAGTCAGGAACATCCGCAAGGTCCTCAGGAAGAT...GAATCTTCTTAAGCAGAGCTGCTGGGGAGTAGCCCCTGTAGCAAGTACCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS GCA 90 bp TCTCTGGAAAGGGGACTTCTGCAGTGGGTGGCCAATTCCTGCCAATaGAAGGTGGTGCCTAGATTTCAGTTGCACTTTCTCCAGATTTCA +
Preference number: 5 (lower is better)
Translates to: SLERGLLQWVANSCQ*KVVPRFQLHFLQIS
Trigger: TGAAATCTGGAGAAAGTGCAACTGAAATCTAGGCACCACCTTGCATTGGCAGGAATTGGCCACCCACTGCAGAAGTCCCCTTTCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp CATGGAAAAGCTAAATGTCTCTGGAAAGGGGACTTCTGCAGTGGGTaGCCAATTCCTGCCAATGCAAGGTGGTGCCTAGATTTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: HGKAKCLWKGDFCSG*PIPANARWCLDFSC
Trigger: GCAACTGAAATCTAGGCACCACCTTGCATTGGCAGGAATTGGCCACCCACTGCAGAAGTCCCCTTTCCAGAGACATTTAGCTTTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp GTGGAATTCAAGAGGGCTTTATCTATAGTGCCTGCTCTCCGACAGTaGTTAAATCCTACTCAGCACGTCCTAGCCAGCACAAGACCCCTT +
Preference number: 5 (lower is better)
Translates to: VEFKRALSIVPALRQ*LNPTQHVLASTRPL
Trigger: AAGGGGTCTTGTGCTGGCTAGGACGTGCTGAGTAGGATTTAACCACTGTCGGAGAGCAGGCACTATAGATAAAGCCCTCTTGAATTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCTCGTTCCCAATCCCTTaGAGAACAGTCTCAAATCCT +
Preference number: 5 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGSFPIP*RTVSNP
Trigger: AGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCGATTCTGGGAATGTCTaGAGTCTCCAGAACAAGGAA +
Preference number: 5 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGDSGNV*SLQNKE
Trigger: TTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATC...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS GCA 90 bp GCGGGCGCTTCTAGAATTTGGGCCAATTTGTTGACTGCCAATAATTaGCTCTGTGGGAGGCATGATTGGGGGATGAAAATAGCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: AGASRIWANLLTANN*LCGRHDWGMKIARV
Trigger: TACTCTGGCTATTTTCATCCCCCAATCATGCCTCCCACAGAGGCAATTATTGGCAGTCAACAAATTGGCCCAAATTCTAGAAGCGCCCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp AGGTGGTGCCTAGATTTCAGTTGCACTTTCTCCAGATTTCACATATaGGTGGTTGCCACTGAGCTCACGCAGACCAGTGAGAACCTTTTC +
Preference number: 5 (lower is better)
Translates to: RWCLDFSCTFSRFHI*VVATELTQTSENLF
Trigger: GAAAAGGTTCTCACTGGTCTGCGTGAGCTCAGTGGCAACCACCCATATGTGAAATCTGGAGAAAGTGCAACTGAAATCTAGGCACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 90 bp AAAGGGGACTTCTGCAGTGGGTGGCCAATTCCTGCCAATGCAAGGTaGTGCCTAGATTTCAGTTGCACTTTCTCCAGATTTCACATATGG +
Preference number: 5 (lower is better)
Translates to: KGDFCSGWPIPANAR*CLDFSCTFSRFHIW
Trigger: CCATATGTGAAATCTGGAGAAAGTGCAACTGAAATCTAGGCACCACCTTGCATTGGCAGGAATTGGCCACCCACTGCAGAAGTCCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCAGGAAAAGAAGTTGCTaGTCCGACACATCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPRKRSC*SDTSAG
Trigger: CCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCT...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GGGCCTTCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGAACGGGGTCAAGATTTaGTGTGTGTGCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: GPSFPIPLRTVSNPEKARNGVKI*CVCKHW
Trigger: CCAGTGTTTGCACACACACAAAATCTTGACCCCGTT...CCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCAGCAACCTTGTGGGGTaGAGGTTTTCTGTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPSNLVG*RFSVCL
Trigger: CAAGCAGACAGAAAACCTCAACCCCACAAGGTTGCT...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTTCAAGAGCATGGTACTaGCTACAGGGGCTACTCCCC +
Preference number: 5 (lower is better)
Translates to: RRFWECLESPEQGTSTSCSRAWY*LQGLLP
Trigger: GGGGAGTAGCCCCTGTAGCAAGTACCATGCTCTTGA...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS TCA 90 bp GACTTGCTGATGGCCACCTGGTCCTTAAGTGGCAGAGCCAGGACGTaGATGAATTCTGACAACATAAACCATACATATTCCTGCCCAACA +
Preference number: 5 (lower is better)
Translates to: DLLMATWSLSGRART*MNSDNINHTYSCPT
Trigger: TGTTGGGCAGGAATATGTATGGTTTATGTTGTCAGAATTCATTCACGTCCTGGCTCTGCCACTTAAGGACCAGGTGGCCATCAGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 90 bp ATGAAGGTGAGAAGTGGAATTCAAGAGGGCTTTATCTATAGTGCCTaGTCTCCGACAGTGGTTAAATCCTACTCAGCACGTCCTAGCCAG +
Preference number: 5 (lower is better)
Translates to: MKVRSGIQEGFIYSA*SPTVVKSYSARPSQ
Trigger: CTGGCTAGGACGTGCTGAGTAGGATTTAACCACTGTCGGAGAGCAGGCACTATAGATAAAGCCCTCTTGAATTCCACTTCTCACCTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp ATCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCGTAAATGACACAAAGTaGAACATAGGGTCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: IKYKGRICKPPVLWPWNGVNDTK*NIGSVL
Trigger: CAACACTGACCCTATGTTCAACTTTGTGTCATTTAC...GCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS CCA 90 bp ATCCTTTGGAAGGGGTCAGATGCCTCATGGATCGGTATAACAGCCTaGGGTCCTCTAGGACCACATACACAAGACTTCAAATCTTTGATA +
Preference number: 5 (lower is better)
Translates to: ILWKGSDASWIGITA*GPLGPHTQDFKSLI
Trigger: TATCAAAGATTTGAAGTCTTGTGTATGTGGTCCTAGAGGACCCCAGGCTGTTATACCGATCCATGAGGCATCTGACCCCTTCCAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS-3UTR CAA 90 bp AGAAGATTCTGGGAATGTCTTGAGTCTCCAGAACAAGGAACAAGCACTTCCTGTCCTCGTAGCCATCTTTaGTTAGTGGACGGAGTTCGT +
Preference number: 5 (lower is better)
Translates to: RRFWECLESPEQGTSTSCPRSHL*LVDGVR
Trigger: ACGAACTCCGTCCACTAACAAAAGATGGCTACGAGG...ACAGGAAGTGCTTGTTCCTTGTTCTGGAGACTCAAGACATTCCCAGAATCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp CTTGTCTCCTCACAGAGGAAAAGAAGTTGCTTGTCCGACACATCTGCTGGGGGTGTAAATGACACAAAGTaGAACATAGGGTCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: LVSSQRKRSCLSDTSAGGVNDTK*NIGSVL
Trigger: CAACACTGACCCTATGTTCAACTTTGTGTCATTTAC...ACCCCCAGCAGATGTGTCGGACAAGCAACTTCTTTTCCTCTGTGAGGAGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS-3UTR CAA 90 bp GAAAATATAACAGTATTCACCCCAGAGAGTGGGATGGCCAATGAGTCTTCTTTCTCTCCTTTGCCTTTTTaGGGCTGTGTGACCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ENITVFTPESGMANESSFSPLPF*GCVTSG
Trigger: GCCTGAGGTCACACAGCCCAAAAAAGGCAAAGGAGA...GAAAGAAGACTCATTGGCCATCCCACTCTCTGGGGTGAATACTGTTATATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp TCAAATACAAGGGGCGGATATGCAAACCTCCGGTCCTTTGGCCCTGGAATGGCAATCTTTCTACAATGTTaGTGTAGTCAGTTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SNTRGGYANLRSFGPGMAIFLQC*CSQFSW
Trigger: CCAGGAAAACTGACTACACAAACATTGTAGAAAGAT...TGCCATTCCAGGGCCAAAGGACCGGAGGTTTGCATATCCGCCCCTTGTATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS-3UTR CAA 90 bp GAAAATATAACAGTATTCACCCCAGAGAGTGGGATGGCCAATGAGTCTTCTTTCAACTGCATCATCTCCTaGATTTTCTCCCGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: ENITVFTPESGMANESSFNCIIS*IFSRWA
Trigger: AGCCCAGCGGGAGAAAATCAAGGAGATGATGCAGTT...GAAAGAAGACTCATTGGCCATCCCACTCTCTGGGGTGAATACTGTTATATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS CCA 90 bp GCCAATTTGTTGACTGCCAATAATTGCCTCTGTGGGAGGCATGATTaGGGGATGAAAATAGCCAGAGTATGTAAATGTAGAGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: ANLLTANNCLCGRHD*GMKIARVCKCRGDR
Trigger: TCTGTCTCCTCTACATTTACATACTCTGGCTATTTTCATCCCCCAATCATGCCTCCCACAGAGGCAATTATTGGCAGTCAACAAATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp TCGTTCCCAATCCCTTTGAGAACAGTCTCAAATCCTGAAAAGGCAAGGCATCCCGTAAATGACACAAAGTaGAACATAGGGTCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: SFPIPLRTVSNPEKARHPVNDTK*NIGSVL
Trigger: CAACACTGACCCTATGTTCAACTTTGTGTCATTTAC...GGGATGCCTTGCCTTTTCAGGATTTGAGACTGTTCTCAAAGGGATTGGGAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000611903.4
CDS TCA 90 bp ATTGGCAGTTTCATATGGCCCAATCTAGTAATATGCTATTTTATCTaGTGCCCTGGAATTATTTCGGGGGAGAGGCTTGGGCTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: IGSFIWPNLVICYFI*CPGIISGERLGLLN
Trigger: ATTCAGGAGCCCAAGCCTCTCCCCCGAAATAATTCCAGGGCATCAGATAAAATAGCATATTACTAGATTGGGCCATATGAAACTGCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS-3UTR CAA 90 bp GAAAATATAACAGTATTCACCCCAGAGAGTGGGATGGCCAATGAGTCTTCTTTCGTTCGTTTTTCCCCATaGCATAACGCTTATAGCTCT +
Preference number: 5 (lower is better)
Translates to: ENITVFTPESGMANESSFVRFSP*HNAYSS
Trigger: AGAGCTATAAGCGTTATGCAATGGGGAAAAACGAAC...GAAAGAAGACTCATTGGCCATCCCACTCTCTGGGGTGAATACTGTTATATTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS GCA 72 bp CCGCGGAGCGCGCAGCCCTGGCCGCGCCTCCCCCGCTaGAGCTGTCTTCCTCGCAGCGGCCGCTCCAGACCG +
Preference number: 6 (lower is better)
Translates to: PRSAQPWPRLPR*SCLPRSGRSRP
Trigger: CGGTCTGGAGCGGCCGCTGCGAGGAAGACAGCTGCAGCGGGGGAGGCGCGGCCAGGGCTGCGCGCTCCGCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374332.9
CDS GCA 72 bp AAGGGACGCCCTCGTCCCCGGGCCTGGAGGCCGGGATaGTATTGCCCCGGGCCGCCGTGGCCTCCTCGCGGG +
Preference number: 6 (lower is better)
Translates to: KGRPRPRAWRPG*YCPGPPWPPRG
Trigger: CCCGCGAGGAGGCCACGGCGGCCCGGGGCAATAGCATCCCGGCCTCCAGGCCCGGGGACGAGGGCGTCCCTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS CCA 72 bp GGGCTTCCCCCGGGCCCCAGACAGCGCAGGGATGCCTaGGTCCGGAGCCGCGGCTGGGCGGCTGCAGATGCG +
Preference number: 6 (lower is better)
Translates to: GLPPGPRQRRDA*VRSRGWAAADA
Trigger: CGCATCTGCAGCCGCCCAGCCGCGGCTCCGGACCCAGGCATCCCTGCGCTGTCTGGGGCCCGGGGGAAGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374332.9
CDS CCA 72 bp GGGTTGGGAGGCGGCTCCTGCTCGCGGGCCGGGGCATaGCCGGCGATTTCAGCCACCACTTCCAGACCAGGC +
Preference number: 6 (lower is better)
Translates to: GLGGGSCSRAGA*PAISATTSRPG
Trigger: GCCTGGTCTGGAAGTGGTGGCTGAAATCGCCGGCCATGCCCCGGCCCGCGAGCAGGAGCCGCCTCCCAACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS CCA 72 bp AGTCAAAGCGGAAAGGGACGCCCTCGTCCCCGGGCCTaGAGGCCGGGATGCTATTGCCCCGGGCCGCCGTGG +
Preference number: 6 (lower is better)
Translates to: SQSGKGRPRPRA*RPGCYCPGPPW
Trigger: CCACGGCGGCCCGGGGCAATAGCATCCCGGCCTCCAGGCCCGGGGACGAGGGCGTCCCTTTCCGCTTTGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS TCA 72 bp ACGGGGAGGCCGGGACGAAGCCGGGCACTTTCCTCATaGGCATCGTGGCCCGGCCGGTGGCTCCAGAAGCCC +
Preference number: 6 (lower is better)
Translates to: TGRPGRSRALSS*ASWPGRWLQKP
Trigger: GGGCTTCTGGAGCCACCGGCCGGGCCACGATGCTCATGAGGAAAGTGCCCGGCTTCGTCCCGGCCTCCCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374332.9
ENST00000611903.4
CDS CAA 90 bp GCCCTCGTTCCCAGGACCGGGTGGCGGAGACGGCTCCGGAATGCGTaGAAGTCAAAGCGGAAAGGGACGCCCTCGTCCCCGGGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: ALVPRTGWRRRLRNA*KSKRKGTPSSPGLE
Trigger: CTCCAGGCCCGGGGACGAGGGCGTCCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCCGTCTCCGCCACCCGGTCCTGGGAACGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS TCA 72 bp CCAGGACCGGGTGGCGGAGACGGCTCCGGAATGCGTTaGAGTCAAAGCGGAAAGGGACGCCCTCGTCCCCGG +
Preference number: 6 (lower is better)
Translates to: PGPGGGDGSGMR*SQSGKGRPRPR
Trigger: CCGGGGACGAGGGCGTCCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCCGTCTCCGCCACCCGGTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS CAA 72 bp CCCAGGACCGGGTGGCGGAGACGGCTCCGGAATGCGTaGAAGTCAAAGCGGAAAGGGACGCCCTCGTCCCCG +
Preference number: 6 (lower is better)
Translates to: PRTGWRRRLRNA*KSKRKGTPSSP
Trigger: CGGGGACGAGGGCGTCCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCCGTCTCCGCCACCCGGTCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS GCA 72 bp CGTTCCCAGGACCGGGTGGCGGAGACGGCTCCGGAATaGGTTGAAGTCAAAGCGGAAAGGGACGCCCTCGTC +
Preference number: 6 (lower is better)
Translates to: RSQDRVAETAPE*VEVKAERDALV
Trigger: GACGAGGGCGTCCCTTTCCGCTTTGACTTCAACGCATTCCGGAGCCGTCTCCGCCACCCGGTCCTGGGAACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000611903.4
CDS CCA 72 bp CTGCGAGCTCTCGGTAGTGGGCCCTCTTTTCTTCCTTaGCATCCTCGGCGCCAAGGGCGATCATGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: LRALGSGPSFLP*HPRRQGRSCPR
Trigger: CCGGGGGCATGATCGCCCTTGGCGCCGAGGATGCCAAGGAAGAAAAGAGGGCCCACTACCGAGAGCTCGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000496532.5
ENST00000611903.4
CDS TCA 72 bp GGCCTGAGCGGGCGTATGACTCGTGACACGTCTTGGTaGTCTGGGCTGCGAGCTCTCGGTAGTGGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: GLSGRMTRDTSW*SGLRALGSGPS
Trigger: AGAGGGCCCACTACCGAGAGCTCGCAGCCCAGATCACCAAGACGTGTCACGAGTCATACGCCCGCTCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496532.5
CDS TCA 72 bp CTCCTGCTGATCCATGAGGGAGGACCCACTCGCCTCTaGAAACCCTGTGGCAGCCGCACGCTCATCCCTCTG +
Preference number: 6 (lower is better)
Translates to: LLLIHEGGPTRL*KPCGSRTLIPL
Trigger: CAGAGGGATGAGCGTGCGGCTGCCACAGGGTTTTCAGAGGCGAGTGGGTCCTCCCTCATGGATCAGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp CTGCCTGGACTGCTGTGTAAGGCTGCACCGGGCAGATaGACAGCTTCCCTCTTGGCCTGGGCTGGACAGAAC +
Preference number: 6 (lower is better)
Translates to: LPGLLCKAAPGR*TASLLAWAGQN
Trigger: GTTCTGTCCAGCCCAGGCCAAGAGGGAAGCTGTGCATCTGCCCGGTGCAGCCTTACACAGCAGTCCAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487493.1
CDS CAA 72 bp AAGCTCACCACGCCCTTTGGGATTCCCGTGGGGGTGTaGAACGCCGGCAGGAGCTTCTCTCCCAGCCTGATG +
Preference number: 6 (lower is better)
Translates to: KLTTPFGIPVGV*NAGRSFSPSLM
Trigger: CATCAGGCTGGGAGAGAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAATCCCAAAGGGCGTGGTGAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000473891.1
ENST00000611903.4
CDS TCA 72 bp TGTCTGAGCGGGCGTATGACTCGTGACACGTCTTGGTaGTCTGGGCTGCGAGCTCTCGGTAGTGGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: CLSGRMTRDTSW*SGLRALGSGPS
Trigger: AGAGGGCCCACTACCGAGAGCTCGCAGCCCAGATCACCAAGACGTGTCACGAGTCATACGCCCGCTCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000611903.4
CDS TCA 72 bp GGCCCAAGTTTGGTGTCTGAGCGGGCGTATGACTCGTaGCACGTCTTGGTGATCTGGGCTGCGAGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: GPSLVSERAYDS*HVLVIWAASSR
Trigger: CCGAGAGCTCGCAGCCCAGATCACCAAGACGTGTCACGAGTCATACGCCCGCTCAGACACCAAACTTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000611903.4
CDS CAA 90 bp ACGGCCTCTCTGCCGGAGTTAAACCAGAAGGCCTCAGGCCCAAGTTaGGTGTCTGGGGAAACAGCCAAGCAGAGGGCCCAGGTCAGACCT +
Preference number: 6 (lower is better)
Translates to: TASLPELNQKASGPS*VSGETAKQRAQVRP
Trigger: AGGTCTGACCTGGGCCCTCTGCTTGGCTGTTTCCCCAGACACCAAACTTGGGCCTGAGGCCTTCTGGTTTAACTCCGGCAGAGAGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487493.1
CDS GCA 72 bp GCCAAGCAGAGGGCCCAGGTCAGACCTCCCACCTCCTaGTTTTCGGGATCCAGGAGAGATGTCAGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: AKQRAQVRPPTS*FSGSRRDVSCL
Trigger: AAGGCAACTGACATCTCTCCTGGATCCCGAAAAGCAGGAGGTGGGAGGTCTGACCTGGGCCCTCTGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487493.1
CDS CCA 72 bp CTGTCGCCACAGGTACATGTAGCTCTCCACCACCTCTaGCCGGAGGATGTAGTAGCTCTCGCTCAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LSPQVHVALHHL*PEDVVALAQLG
Trigger: ACCCAGCTGAGCGAGAGCTACTACATCCTCCGGCCAGAGGTGGTGGAGAGCTACATGTACCTGTGGCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000487493.1
ENST00000611903.4
CDS CAA 72 bp CTGCCGGAGTTAAACCAGAAGGCCTCAGGCCCAAGTTaGGTGTCTGGGGAAACAGCCAAGCAGAGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: LPELNQKASGPS*VSGETAKQRAQ
Trigger: CTGGGCCCTCTGCTTGGCTGTTTCCCCAGACACCAAACTTGGGCCTGAGGCCTTCTGGTTTAACTCCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487493.1
CDS CAA 90 bp CCACTTTTGAAGCTCACCACGCCCTTTGGGATTCCCGTGGGGGTGTaGAACGCCGGCAGGAGCTTCTCTCCCAGCCTGATGGCCTTTATT +
Preference number: 6 (lower is better)
Translates to: PLLKLTTPFGIPVGV*NAGRSFSPSLMAFI
Trigger: AATAAAGGCCATCAGGCTGGGAGAGAAGCTCCTGCCGGCGTTCAACACCCCCACGGGAATCCCAAAGGGCGTGGTGAGCTTCAAAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000473891.1
ENST00000611903.4
CDS CAA 90 bp AGACCCCTTGGGAGAGAAAGGCCCTTGGGACCACACTGTCTCATGTaGATAGAGTTATGTGTGTACGGGGCCGGGAGTGCGGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: RPLGRERPLGPHCLM*IELCVYGAGSAGEP
Trigger: TGGCTCTCCCGCACTCCCGGCCCCGTACACACATAACTCTATCAACATGAGACAGTGTGGTCCCAAGGGCCTTTCTCTCCCAAGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 72 bp AGTATTTCTCCAAGGCCTGAGCGGGCGTATGACTCGTaGCACGTCTTGGTGATCTGGGCTGCGAGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: SISPRPERAYDS*HVLVIWAASSR
Trigger: CCGAGAGCTCGCAGCCCAGATCACCAAGACGTGTCACGAGTCATACGCCCGCTCAGGCCTTGGAGAAATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496532.5
CDS GCA 72 bp CCTCTGCTCCGCAGGAAGAAGGGTGGGGAGGAGACTTaGCTTTTCAGCGAAGACCTGGTTGCCAGAGAGTTC +
Preference number: 6 (lower is better)
Translates to: PLLRRKKGGEET*LFSEDLVAREF
Trigger: GAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAAGTCTCCTCCCCACCCTTCTTCCTGCGGAGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp ACCTCCTGCTTTTCGGGATCCAGGAGAGATGTCAGTTaGCTTGAACCCGCGGCCAGGGTGATGTCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: TSCFSGSRRDVS*LEPAARVMSGV
Trigger: CACACCTGACATCACCCTGGCCGCGGGTTCAAGGCAACTGACATCTCTCCTGGATCCCGAAAAGCAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487493.1
CDS CCA 72 bp GTTAAACCAGAAGGCCTCAGGCCCAAGTTTGGTGTCTaGGGAAACAGCCAAGCAGAGGGCCCAGGTCAGACC +
Preference number: 6 (lower is better)
Translates to: VKPEGLRPKFGV*GNSQAEGPGQT
Trigger: GGTCTGACCTGGGCCCTCTGCTTGGCTGTTTCCCCAGACACCAAACTTGGGCCTGAGGCCTTCTGGTTTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487493.1
CDS CAA 72 bp CCCTCTGCTCCGCAGGAAGAAGGGTGGGGAGGAGACTaGCCTTTTCAGCGAAGACCTGGTTGCCAGAGAGTT +
Preference number: 6 (lower is better)
Translates to: PSAPQEEGWGGD*PFQRRPGCQRV
Trigger: AACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAAGTCTCCTCCCCACCCTTCTTCCTGCGGAGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 72 bp CCAGCACATCCTGGGCTTGAATCACGGCTTTATCACTaGCCAGCTGGAAGGCCCAGGGCAAGTGACTTGACC +
Preference number: 6 (lower is better)
Translates to: PAHPGLESRLYH*PAGRPRASDLT
Trigger: GGTCAAGTCACTTGCCCTGGGCCTTCCAGCTGGTCAGTGATAAAGCCGTGATTCAAGCCCAGGATGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp CATGTTGATAGAGTTATGTGTGTACGGGGCCGGGAGTaGGGGAGAGCCACCTTTCTGCAGGCAGACCTTCCT +
Preference number: 6 (lower is better)
Translates to: HVDRVMCVRGRE*GRATFLQADLP
Trigger: AGGAAGGTCTGCCTGCAGAAAGGTGGCTCTCCCGCACTCCCGGCCCCGTACACACATAACTCTATCAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 72 bp GGCAGGGGTAGCTATTACTCCAGAATAACCAGGGACTaGAGTGAGCTCCCTGTCCCACTCCATTCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GRGSYYSRITRD*SELPVPLHSEL
Trigger: CAGCTCCGAATGGAGTGGGACAGGGAGCTCACTCCAGTCCCTGGTTATTCTGGAGTAATAGCTACCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 72 bp TCCTACTCAGCACGTCCTAGCCAGCACAAGACCCCTTaGGAGAGAAAGGCCCTTGGGACCACACTGTCTCAT +
Preference number: 6 (lower is better)
Translates to: SYSARPSQHKTP*ERKALGTTLSH
Trigger: ATGAGACAGTGTGGTCCCAAGGGCCTTTCTCTCCCAAGGGGTCTTGTGCTGGCTAGGACGTGCTGAGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 90 bp GCTCCCCTGGAGGGTGCGGGCGCTTCTAGAATTTGGGCCAATTTGTaGACTGCCAATAATTGCCTCTGTGGGAGGCATGATTGGGGGATG +
Preference number: 6 (lower is better)
Translates to: APLEGAGASRIWANL*TANNCLCGRHDWGM
Trigger: CATCCCCCAATCATGCCTCCCACAGAGGCAATTATTGGCAGTCAACAAATTGGCCCAAATTCTAGAAGCGCCCGCACCCTCCAGGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 72 bp GGGAGGGACTGTAGCTGCTGGAGCCTGAGTGCCATATaGGGGAGGTGTGAGCACTTCCCTTCTTTGGATTTG +
Preference number: 6 (lower is better)
Translates to: GRDCSCWSLSAI*GRCEHFPSLDL
Trigger: CAAATCCAAAGAAGGGAAGTGCTCACACCTCCCTCATATGGCACTCAGGCTCCAGCAGCTACAGTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp CATGAGGTAGAGGGTATCGAGGGAGTCAATGACTGTTaGCCCGCTGAGGCCTCCGAACATGTTACCCTCGTA +
Preference number: 6 (lower is better)
Translates to: HEVEGIEGVNDC*PAEASEHVTLV
Trigger: TACGAGGGTAACATGTTCGGAGGCCTCAGCGGGGCAACAGTCATTGACTCCCTCGATACCCTCTACCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263979.7
ENST00000374332.9
ENST00000473891.1
ENST00000611903.4
CDS GCA 72 bp TCCCCCGATGTAGCGGATGTTCACCTCAAACAAGGATaGTTCTCCGCTCACGTTCAGGTGGAAGCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: SPDVADVHLKQG*FSAHVQVEALS
Trigger: GGAGAGAGCTTCCACCTGAACGTGAGCGGAGAAGCATCCTTGTTTGAGGTGAACATCCGCTACATCGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000473891.1
ENST00000611903.4
CDS GCA 72 bp CATGAGGTAGAGGGTATCGAGGGAGTCAATGACTGTTaGCCCGCTGAGGCCTCCTCTGTTTTCTCCAGTGCT +
Preference number: 6 (lower is better)
Translates to: HEVEGIEGVNDC*PAEASSVFSSA
Trigger: AGCACTGGAGAAAACAGAGGAGGCCTCAGCGGGGCAACAGTCATTGACTCCCTCGATACCCTCTACCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374329.1
CDS CCA 72 bp GGTGGGAATCTATCAGTCATCTCCCAGCTCCCATACTaGTCTAAGAGGCGGGCATTCCAGGGGGAAGACAAG +
Preference number: 6 (lower is better)
Translates to: GGNLSVISQLPY*SKRRAFQGEDK
Trigger: CTTGTCTTCCCCCTGGAATGCCCGCCTCTTAGACCAGTATGGGAGCTGGGAGATGACTGATAGATTCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 72 bp AAACCATACATATTCCTGCCCAACACAGGGCAGCACTaGGCCAACACAGATCAGGGCCGTGACCATGGAGCA +
Preference number: 6 (lower is better)
Translates to: KPYIFLPNTGQH*ANTDQGRDHGA
Trigger: TGCTCCATGGTCACGGCCCTGATCTGTGTTGGCCCAGTGCTGCCCTGTGTTGGGCAGGAATATGTATGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 90 bp CAGCACGTCCTAGCCAGCACAAGACCCCTTGGGAGAGAAAGGCCCTaGGGACCACACTGTCTCATGTTGATAGAGTTATGTGTGTACGGG +
Preference number: 6 (lower is better)
Translates to: QHVLASTRPLGRERP*GPHCLMLIELCVYG
Trigger: CCCGTACACACATAACTCTATCAACATGAGACAGTGTGGTCCCAAGGGCCTTTCTCTCCCAAGGGGTCTTGTGCTGGCTAGGACGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp CTGGAAAGGGGACTTCTGCAGTGGGTGGCCAATTCCTaGCAATGCAAGGTGGTGCCTAGATTTCAGTTGCAC +
Preference number: 6 (lower is better)
Translates to: LERGLLQWVANS*QCKVVPRFQLH
Trigger: GTGCAACTGAAATCTAGGCACCACCTTGCATTGGCAGGAATTGGCCACCCACTGCAGAAGTCCCCTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp CATAGGGTTGTTGGGAAGAGTAGAGCCATTATAAAGTaGCCAGCACATAGCGGGTGCTCAGGCAGGGGTAGC +
Preference number: 6 (lower is better)
Translates to: HRVVGKSRAIIK*PAHSGCSGRGS
Trigger: GCTACCCCTGCCTGAGCACCCGCTATGTGCTGGGCACTTTATAATGGCTCTACTCTTCCCAACAACCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp GACAGAGATAGACGGATGGACTCCAGAGCAAAAGCCTaGAGCCTGCTCTATCAATCTGGTCTGGAAGGAGCC +
Preference number: 6 (lower is better)
Translates to: DRDRRMDSRAKA*SLLYQSGLEGA
Trigger: GGCTCCTTCCAGACCAGATTGATAGAGCAGGCTGCAGGCTTTTGCTCTGGAGTCCATCCGTCTATCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 72 bp CCGCTAGAAAGAAGCTCTGCTGCTTGTTGTCGTGGTTaGGGGTGCTACTGTACACGTCTTGGATCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: PLERSSAACCRG*GCYCTRLGSQR
Trigger: TCTCTGGGATCCAAGACGTGTACAGTAGCACCCCCAACCACGACAACAAGCAGCAGAGCTTCTTTCTAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000487493.1
ENST00000496532.5
ENST00000611903.4
CDS CCA 72 bp GTAGCTGTGGGAATCTATCATCTCCCAGTTGCCTGCTaGGAGCCGTGGCATAGAGGTGGGAATCTATCAGTC +
Preference number: 6 (lower is better)
Translates to: VAVGIYHLPVAC*EPWHRGGNLSV
Trigger: GACTGATAGATTCCCACCTCTATGCCACGGCTCCCAGCAGGCAACTGGGAGATGATAGATTCCCACAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 72 bp CTTGTTGTCGTGGTTGGGGGTGCTACTGTACACGTCTaGGATCCCAGAGAAACCGGCTTCTGTCCGACAGTA +
Preference number: 6 (lower is better)
Translates to: LVVVVGGATVHV*DPRETGFCPTV
Trigger: TACTGTCGGACAGAAGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAGCACCCCCAACCACGACAACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000487493.1
ENST00000496532.5
ENST00000611903.4
CDS TCA 72 bp GCCCTGGAATTATTTCGGGGGAGAGGCTTGGGCTCCTaGATAACCCCATGTCCTAACAGGCGTTTCAGTGTT +
Preference number: 6 (lower is better)
Translates to: ALELFRGRGLGS*ITPCPNRRFSV
Trigger: AACACTGAAACGCCTGTTAGGACATGGGGTTATTCAGGAGCCCAAGCCTCTCCCCCGAAATAATTCCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp CCAAGCAAACTGCATCATCCTTTGGAAGGGGTCAGATaGCTCATGGATCGGTATAACAGCCTGGGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: PSKLHHPLEGVR*LMDRYNSLGSS
Trigger: AGAGGACCCCAGGCTGTTATACCGATCCATGAGGCATCTGACCCCTTCCAAAGGATGATGCAGTTTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS GCA 72 bp AGGGGACTTCTGCAGTGGGTGGCCAATTCCTGCCAATaGAAGGTGGTGCCTAGATTTCAGTTGCACTTTCTC +
Preference number: 6 (lower is better)
Translates to: RGLLQWVANSCQ*KVVPRFQLHFL
Trigger: GAGAAAGTGCAACTGAAATCTAGGCACCACCTTGCATTGGCAGGAATTGGCCACCCACTGCAGAAGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 72 bp AACTGCATCATCCTTTGGAAGGGGTCAGATGCCTCATaGATCGGTATAACAGCCTGGGGTCCTCTAGGACCA +
Preference number: 6 (lower is better)
Translates to: NCIILWKGSDAS*IGITAWGPLGP
Trigger: TGGTCCTAGAGGACCCCAGGCTGTTATACCGATCCATGAGGCATCTGACCCCTTCCAAAGGATGATGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS CCA 72 bp TTGTTGTCGTGGTTGGGGGTGCTACTGTACACGTCTTaGATCCCAGAGAAACCGGCTTCTGTCCGACAGTAT +
Preference number: 6 (lower is better)
Translates to: LLSWLGVLLYTS*IPEKPASVRQY
Trigger: ATACTGTCGGACAGAAGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAGCACCCCCAACCACGACAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000487493.1
ENST00000496532.5
ENST00000611903.4
CDS CCA 72 bp AGGGTGGGGAGGAGACTTGCCTTTTCAGCGAAGACCTaGTTGCCAGAGAGTTCAGTGAGGTGTAAGAATTCC +
Preference number: 6 (lower is better)
Translates to: RVGRRLAFSAKT*LPESSVRCKNS
Trigger: GGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAAGTCTCCTCCCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 90 bp GGAAGAAGGGTGGGGAGGAGACTTGCCTTTTCAGCGAAGACCTGGTaGCCAGAGAGTTCAGTGAGGTGTAAGAATTCCAAGTGCAGGGAT +
Preference number: 6 (lower is better)
Translates to: GRRVGRRLAFSAKTW*PESSVRCKNSKCRD
Trigger: ATCCCTGCACTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAAGTCTCCTCCCCACCCTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp TTGCCAGAGAGTTCAGTGAGGTGTAAGAATTCCAAGTaGAGGGATCCAAACTCCGCCAAGATGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LPESSVRCKNSK*RDPNSAKMLLL
Trigger: CAGCAGCAGCATCTTGGCGGAGTTTGGATCCCTGCACTTGGAATTCTTACACCTCACTGAACTCTCTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000473891.1
ENST00000611903.4
CDS CCA 72 bp GGCAGGCAGATCTCACATGGAAAAGCTAAATGTCTCTaGAAAGGGGACTTCTGCAGTGGGTGGCCAATTCCT +
Preference number: 6 (lower is better)
Translates to: GRQISHGKAKCL*KGDFCSGWPIP
Trigger: AGGAATTGGCCACCCACTGCAGAAGTCCCCTTTCCAGAGACATTTAGCTTTTCCATGTGAGATCTGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 72 bp GTGGGGAGGAGACTTGCCTTTTCAGCGAAGACCTGGTaGCCAGAGAGTTCAGTGAGGTGTAAGAATTCCAAG +
Preference number: 6 (lower is better)
Translates to: VGRRLAFSAKTW*PESSVRCKNSK
Trigger: CTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAAGTCTCCTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 72 bp GAAATCTGTTTCCTCACAGCTGTGCCAGGTAATGCTTaGAGGCTGGATGGCGACATGATACTGGGAGCCATG +
Preference number: 6 (lower is better)
Translates to: EICFLTAVPGNA*RLDGDMILGAM
Trigger: CATGGCTCCCAGTATCATGTCGCCATCCAGCCTCAAAGCATTACCTGGCACAGCTGTGAGGAAACAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 72 bp AGGACGGACTGTTTAAGGGTGGCGGCAGTGAGCTCCTaGTCAGAGAAAGTAATCAAGAAGAGGCTGAACAGC +
Preference number: 6 (lower is better)
Translates to: RTDCLRVAAVSS*SEKVIKKRLNS
Trigger: GCTGTTCAGCCTCTTCTTGATTACTTTCTCTGACAAGGAGCTCACTGCCGCCACCCTTAAACAGTCCGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 72 bp GAGGGTGCGGGCGCTTCTAGAATTTGGGCCAATTTGTaGACTGCCAATAATTGCCTCTGTGGGAGGCATGAT +
Preference number: 6 (lower is better)
Translates to: EGAGASRIWANL*TANNCLCGRHD
Trigger: ATCATGCCTCCCACAGAGGCAATTATTGGCAGTCAACAAATTGGCCCAAATTCTAGAAGCGCCCGCACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 90 bp GAAGGAGCAAAACTGGATGCTCCACTGAAGGAGGCCTCTTCCAGCTaGGACATACTTCTCATGTCACCTCTACTGTCCAAGGAAGACACA +
Preference number: 6 (lower is better)
Translates to: EGAKLDAPLKEASSS*DILLMSPLLSKEDT
Trigger: TGTGTCTTCCTTGGACAGTAGAGGTGACATGAGAAGTATGTCCAAGCTGGAAGAGGCCTCCTTCAGTGGAGCATCCAGTTTTGCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496532.5
CDS CAA 90 bp ACCTTGCGGATGTTCCTGACTGTTGCCTTTTCAGCGAAGACCTGGTaGCCAGAGAGTTCAGTGAGGTGTAAGAATTCCAAGTGCAGGGAT +
Preference number: 6 (lower is better)
Translates to: TLRMFLTVAFSAKTW*PESSVRCKNSKCRD
Trigger: ATCCCTGCACTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAACAGTCAGGAACATCCGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS TCA 72 bp AGGGTGCGGGCGCTTCTAGAATTTGGGCCAATTTGTTaGCTGCCAATAATTGCCTCTGTGGGAGGCATGATT +
Preference number: 6 (lower is better)
Translates to: RVRALLEFGPIC*LPIIASVGGMI
Trigger: AATCATGCCTCCCACAGAGGCAATTATTGGCAGTCAACAAATTGGCCCAAATTCTAGAAGCGCCCGCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 72 bp CCACACAAAGAGAAGGAGCAAAACTGGATGCTCCACTaGAGGAGGCCTCTTCCAGCTTGGACATACTTCTCA +
Preference number: 6 (lower is better)
Translates to: PHKEKEQNWMLH*RRPLPAWTYFS
Trigger: TGAGAAGTATGTCCAAGCTGGAAGAGGCCTCCTTCAGTGGAGCATCCAGTTTTGCTCCTTCTCTTTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496532.5
CDS GCA 72 bp AGATACTTTAGTGTCTCCGCTAGAAAGAAGCTCTGCTaGTTGTTGTCGTGGTTGGGGGTGCTACTGTACACG +
Preference number: 6 (lower is better)
Translates to: RYFSVSARKKLC*LLSWLGVLLYT
Trigger: CGTGTACAGTAGCACCCCCAACCACGACAACAAGCAGCAGAGCTTCTTTCTAGCGGAGACACTAAAGTATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000475314.5
ENST00000487493.1
ENST00000611903.4
CDS GCA 72 bp AGTAGAGCCATTATAAAGTGCCCAGCACATAGCGGGTaGTCAGGCAGGGGTAGCTATTACTCCAGAATAACC +
Preference number: 6 (lower is better)
Translates to: SRAIIKCPAHSG*SGRGSYYSRIT
Trigger: GGTTATTCTGGAGTAATAGCTACCCCTGCCTGAGCACCCGCTATGTGCTGGGCACTTTATAATGGCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 72 bp AAGGGGTCAGATGCCTCATGGATCGGTATAACAGCCTaGGGTCCTCTAGGACCACATACACAAGACTTCAAA +
Preference number: 6 (lower is better)
Translates to: KGSDASWIGITA*GPLGPHTQDFK
Trigger: TTTGAAGTCTTGTGTATGTGGTCCTAGAGGACCCCAGGCTGTTATACCGATCCATGAGGCATCTGACCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263979.7
CDS CCA 72 bp ACCTTGCGGATGTTCCTGACCTTTTCAGCGAAGACCTaGTTGCCAGAGAGTTCAGTGAGGTGTAAGAATTCC +
Preference number: 6 (lower is better)
Translates to: TLRMFLTFSAKT*LPESSVRCKNS
Trigger: GGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGTCAGGAACATCCGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
CDS CCA 72 bp AAGAGGGCTTTATCTATAGTGCCTGCTCTCCGACAGTaGTTAAATCCTACTCAGCACGTCCTAGCCAGCACA +
Preference number: 6 (lower is better)
Translates to: KRALSIVPALRQ*LNPTQHVLAST
Trigger: TGTGCTGGCTAGGACGTGCTGAGTAGGATTTAACCACTGTCGGAGAGCAGGCACTATAGATAAAGCCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 72 bp CGGATGTTCCTGACTGTTGCCTTTTCAGCGAAGACCTaGTTGCCAGAGAGTTCAGTGAGGTGTAAGAATTCC +
Preference number: 6 (lower is better)
Translates to: RMFLTVAFSAKT*LPESSVRCKNS
Trigger: GGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAACAGTCAGGAACATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS CAA 72 bp AAACTGGATGCTCCACTGAAGGAGGCCTCTTCCAGCTaGGACATACTTCTCATGTCACCTCTACTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: KLDAPLKEASSS*DILLMSPLLSK
Trigger: CTTGGACAGTAGAGGTGACATGAGAAGTATGTCCAAGCTGGAAGAGGCCTCCTTCAGTGGAGCATCCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496532.5
CDS TCA 72 bp CCTTTTCAGCGAAGACCTGGTTGCCAGAGAGTTCAGTaGGGTGTAAGAATTCCAAGTGCAGGGATCCAAACT +
Preference number: 6 (lower is better)
Translates to: PFQRRPGCQRVQ*GVRIPSAGIQT
Trigger: AGTTTGGATCCCTGCACTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
ENST00000473891.1
ENST00000611903.4
CDS GCA 72 bp TTTATGTTAACGAAGTCCATTACGGGGACAGGAATGTaGTTGTACCTGCGTTACTCTCGACTGTCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: FMLTKSITGTGM*LYLRYSRLSWW
Trigger: CCACCAGGACAGTCGAGAGTAACGCAGGTACAAGCACATTCCTGTCCCCGTAATGGACTTCGTTAACATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 72 bp TTCTGCAGTGGGTGGCCAATTCCTGCCAATGCAAGGTaGTGCCTAGATTTCAGTTGCACTTTCTCCAGATTT +
Preference number: 6 (lower is better)
Translates to: FCSGWPIPANAR*CLDFSCTFSRF
Trigger: AAATCTGGAGAAAGTGCAACTGAAATCTAGGCACCACCTTGCATTGGCAGGAATTGGCCACCCACTGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CCA 72 bp GAGTATGTAAATGTAGAGGAGACAGAGATAGACGGATaGACTCCAGAGCAAAAGCCTGCAGCCTGCTCTATC +
Preference number: 6 (lower is better)
Translates to: EYVNVEETEIDG*TPEQKPAACSI
Trigger: GATAGAGCAGGCTGCAGGCTTTTGCTCTGGAGTCCATCCGTCTATCTCTGTCTCCTCTACATTTACATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 72 bp TTGCGGATGTTCCTGACCTTTTCAGCGAAGACCTGGTaGCCAGAGAGTTCAGTGAGGTGTAAGAATTCCAAG +
Preference number: 6 (lower is better)
Translates to: LRMFLTFSAKTW*PESSVRCKNSK
Trigger: CTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGTCAGGAACATCCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263979.7
ENST00000374329.1
ENST00000374332.9
CDS CAA 72 bp TCAGTTGCACTTTCTCCAGATTTCACATATGGGTGGTaGCCACTGAGCTCACGCAGACCAGTGAGAACCTTT +
Preference number: 6 (lower is better)
Translates to: SVALSPDFTYGW*PLSSRRPVRTF
Trigger: AAAGGTTCTCACTGGTCTGCGTGAGCTCAGTGGCAACCACCCATATGTGAAATCTGGAGAAAGTGCAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 90 bp GGAGGTGGGAAAGGATCAGAAAATAAGAGCTACCAGGAAGTGAGGTaGAACTCATTCCACGAACTTTCAAATGGGGGAGTTTCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: GGGKGSENKSYQEVR*NSFHELSNGGVSGR
Trigger: CCTCCCTGAAACTCCCCCATTTGAAAGTTCGTGGAATGAGTTCAACCTCACTTCCTGGTAGCTCTTATTTTCTGATCCTTTCCCACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp ATTCCTGCCAATGCAAGGTGGTGCCTAGATTTCAGTTaGACTTTCTCCAGATTTCACATATGGGTGGTTGCC +
Preference number: 6 (lower is better)
Translates to: IPANARWCLDFS*TFSRFHIWVVA
Trigger: GGCAACCACCCATATGTGAAATCTGGAGAAAGTGCAACTGAAATCTAGGCACCACCTTGCATTGGCAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 72 bp ATGTTCCTGACTGTTGCCTTTTCAGCGAAGACCTGGTaGCCAGAGAGTTCAGTGAGGTGTAAGAATTCCAAG +
Preference number: 6 (lower is better)
Translates to: MFLTVAFSAKTW*PESSVRCKNSK
Trigger: CTTGGAATTCTTACACCTCACTGAACTCTCTGGCAACCAGGTCTTCGCTGAAAAGGCAACAGTCAGGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611903.4
CDS GCA 72 bp AGAAGTGGAATTCAAGAGGGCTTTATCTATAGTGCCTaGTCTCCGACAGTGGTTAAATCCTACTCAGCACGT +
Preference number: 6 (lower is better)
Translates to: RSGIQEGFIYSA*SPTVVKSYSAR
Trigger: ACGTGCTGAGTAGGATTTAACCACTGTCGGAGAGCAGGCACTATAGATAAAGCCCTCTTGAATTCCACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 90 bp CTCCTTGTCAGAGAAAGTAATCAAGAAGAGGCTGAACAGCTCTTCTaGAGCTTCTTAAGGACACTCAGGTGGACTCCTACATTGAGTAAG +
Preference number: 6 (lower is better)
Translates to: LLVRESNQEEAEQLF*SFLRTLRWTPTLSK
Trigger: CTTACTCAATGTAGGAGTCCACCTGAGTGTCCTTAAGAAGCTCAAGAAGAGCTGTTCAGCCTCTTCTTGATTACTTTCTCTGACAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 72 bp GTCCTTAAGTGGCAGAGCCAGGACGTGAATGAATTCTaGCAACATAAACCATACATATTCCTGCCCAACACA +
Preference number: 6 (lower is better)
Translates to: VLKWQSQDVNEF*QHKPYIFLPNT
Trigger: TGTGTTGGGCAGGAATATGTATGGTTTATGTTGTCAGAATTCATTCACGTCCTGGCTCTGCCACTTAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 72 bp TTCATATGGCCCAATCTAGTAATATGCTATTTTATCTaGTGCCCTGGAATTATTTCGGGGGAGAGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: FIWPNLVICYFI*CPGIISGERLG
Trigger: CCCAAGCCTCTCCCCCGAAATAATTCCAGGGCATCAGATAAAATAGCATATTACTAGATTGGGCCATATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS GCA 72 bp TCTAGAATTTGGGCCAATTTGTTGACTGCCAATAATTaGCTCTGTGGGAGGCATGATTGGGGGATGAAAATA +
Preference number: 6 (lower is better)
Translates to: SRIWANLLTANN*LCGRHDWGMKI
Trigger: TATTTTCATCCCCCAATCATGCCTCCCACAGAGGCAATTATTGGCAGTCAACAAATTGGCCCAAATTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS TCA 72 bp AAAGCAATAACAGTTGTTATCCTTTTTCAGTTCCTTTaGGCCAGATCCGTTATATACATTATCTCCAACCCT +
Preference number: 6 (lower is better)
Translates to: KAITVVILFQFL*ARSVIYIISNP
Trigger: AGGGTTGGAGATAATGTATATAACGGATCTGGCTCAAAGGAACTGAAAAAGGATAACAACTGTTATTGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473891.1
CDS CAA 72 bp AAAAGCAATAACAGTTGTTATCCTTTTTCAGTTCCTTaGAGCCAGATCCGTTATATACATTATCTCCAACCC +
Preference number: 6 (lower is better)
Translates to: KSNNSCYPFSVP*SQIRYIHYLQP
Trigger: GGGTTGGAGATAATGTATATAACGGATCTGGCTCAAAGGAACTGAAAAAGGATAACAACTGTTATTGCTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473891.1