Pregenerated sensors for MAN1B1-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000268996

Ensembl transcript IDs: ENST00000596585.3

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGGTTAGAAGGGTTTGCCGCAGGCGCTCCGTTGCTAATGTTTTTGTaGGGGCTTCTTCAGGGCCTCTTGTTAGAGTGTGACATAAACGAC	+
Preference number: 5 (lower is better) Translates to: RLEGFAAGAPLLMFL*GLLQGLLLECDIND Trigger: GTCGTTTATGTCACACTCTAACAAGAGGCCCTGAAGAAGCCCTCACAAAAACATTAGCAACGGAGCGCCTGCGGCAAACCCTTCTAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596585.3
CDS CCA 90 bp	CTTCTTCAGGGCCTCTTGTTAGAGTGTGACATAAACGACTTCATTTaGGTACCAGCAAGTGTCACAGGGGGCAGAGACCAGCAGAAACCT	+
Preference number: 5 (lower is better) Translates to: LLQGLLLECDINDFI*VPASVTGGRDQQKP Trigger: AGGTTTCTGCTGGTCTCTGCCCCCTGTGACACTTGCTGGTACCCAAATGAAGTCGTTTATGTCACACTCTAACAAGAGGCCCTGAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596585.3
CDS TCA 90 bp	GCTAATGTTTTTGTGAGGGCTTCTTCAGGGCCTCTTGTTAGAGTGTaGCATAAACGACTTCATTTGGGTACCAGCAAGTGTCACAGGGGG	+
Preference number: 5 (lower is better) Translates to: ANVFVRASSGPLVRV*HKRLHLGTSKCHRG Trigger: CCCCCTGTGACACTTGCTGGTACCCAAATGAAGTCGTTTATGTCACACTCTAACAAGAGGCCCTGAAGAAGCCCTCACAAAAACATTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596585.3
CDS TCA 72 bp	GGGTTTGCCGCAGGCGCTCCGTTGCTAATGTTTTTGTaGGGGCTTCTTCAGGGCCTCTTGTTAGAGTGTGAC	+
Preference number: 6 (lower is better) Translates to: GFAAGAPLLMFL*GLLQGLLLECD Trigger: GTCACACTCTAACAAGAGGCCCTGAAGAAGCCCTCACAAAAACATTAGCAACGGAGCGCCTGCGGCAAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000596585.3
CDS CCA 72 bp	GGCCTCTTGTTAGAGTGTGACATAAACGACTTCATTTaGGTACCAGCAAGTGTCACAGGGGGCAGAGACCAG	+
Preference number: 6 (lower is better) Translates to: GLLLECDINDFI*VPASVTGGRDQ Trigger: CTGGTCTCTGCCCCCTGTGACACTTGCTGGTACCCAAATGAAGTCGTTTATGTCACACTCTAACAAGAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000596585.3
CDS TCA 72 bp	TTTGTGAGGGCTTCTTCAGGGCCTCTTGTTAGAGTGTaGCATAAACGACTTCATTTGGGTACCAGCAAGTGT	+
Preference number: 6 (lower is better) Translates to: FVRASSGPLVRV*HKRLHLGTSKC Trigger: ACACTTGCTGGTACCCAAATGAAGTCGTTTATGTCACACTCTAACAAGAGGCCCTGAAGAAGCCCTCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596585.3

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