RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAMSTR (Homo sapiens)

Ensembl gene IDs: ENSG00000176909

Ensembl transcript IDs: ENST00000318083.11, ENST00000356751.8, ENST00000594582.1, ENST00000595591.1, ENST00000599703.1

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTaGGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTCCCACAAG +
Preference number: 1 (lower is better)
Translates to: LQEAGGVGGCLRSCV*GRRGSAGSSLSSHK
Trigger: CTTGTGGGAGGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
3UTR-3UTR CCA 90 bp AACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCCACTCTGGAGGCAGGTGGGGTTaGAGGTTGTCTCCGATCCTG +
Preference number: 2 (lower is better)
Translates to: NQNPGRSGSGSPILPLHSGGRWG*RLSPIL
Trigger: CAGGATCGGAGACAACCTCCAACCCCACCTGCCTCC...AGAGTGGAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318083.11
3UTR GCA 72 bp GCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTaGGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: AGGVGGCLRSCV*GRRGSAGSSLS
Trigger: GGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
3UTR-3UTR CAA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTAGGAGGCAGGTGGGGTaGGAGGTTGTCTCCGATCCT +
Preference number: 3 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSRRQVG*EVVSDP
Trigger: AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCT...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
3UTR-3UTR CAA 90 bp TTTCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCGAAGCAGCAAGCAGCTaGTTTGCCGTGGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: FHLQPEPREVRVRLPHSPEAASS*FAVASS
Trigger: GCTGCTGGCCACGGCAAACAAGCTGCTTGCTGCTTC...GGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318083.11
3UTR CCA 72 bp AGGCAGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTaGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGG +
Preference number: 3 (lower is better)
Translates to: RQLHVSSTSGGR*GWRLSPILCLR
Trigger: CCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
3UTR-3UTR CAA 90 bp TCTCCTGCATCCAAAAGGCATAACCACCTTCCAGGCTCCCCAAACAACAGGGAGAGGAGGCAGGTGGGGTaGGAGGTTGTCTCCGATCCT +
Preference number: 3 (lower is better)
Translates to: SPASKRHNHLPGSPNNRERRQVG*EVVSDP
Trigger: AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCT...CTCCCTGTTGTTTGGGGAGCCTGGAAGGTGGTTATGCCTTTTGGATGCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR GCA 90 bp CTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTCCCTGACGCCGGGCGGCTaGCAGGGCCTTGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LRSCVCGRRGSAGSSLSSLTPGG*QGLGLE
Trigger: CTCAAGCCCAAGGCCCTGGCAGCCGCCCGGCGTCAG...GGAGGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR CCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGCCAGCGTGCAGGCTaGAGGCAGCCCTGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGSQRAG*RQPCPR
Trigger: CCGGGGGCAGGGCTGCCTCCAGCCTGCACGCTGGCT...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS-3UTR GCA 90 bp TTTCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCCCCCGCAGGCGCAGCTaGTGCCGGAGCTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: FHLQPEPREVRVRLPHSPPRRRS*CRSSET
Trigger: GGTCTCAGAGCTCCGGCAGCAGCTGCGCCTGCGGGG...GGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGAAA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR GCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGCCCCGCAGGCGCAGCTaGTGCCGGAGCTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRPRRRS*CRSSET
Trigger: GGTCTCAGAGCTCCGGCAGCAGCTGCGCCTGCGGGG...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR GCA 90 bp ATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCGGTCAGGGCTGGAGCTaGAGCAGGAGCCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ISNQNPGRSGSGSPILPLGQGWS*SRSRSG
Trigger: CCCACTCCGGCTCCTGCTGCAGCTCCAGCCCTGACC...GAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR TCA 90 bp GGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCGCAGGACCCCAGGGCTaGAGAGGAAAGGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: GCLRSCVCGRRGSAGSSLAGPQG*RGKGPC
Trigger: GCACGGCCCCTTTCCTCTTCAGCCCTGGGGTCCTGC...GAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTCGCAGGCGCAGCTGCTaGCGGAGCTCTGAGACCGTC +
Preference number: 4 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSRRRSC*RSSETV
Trigger: GACGGTCTCAGAGCTCCGGCAGCAGCTGCGCCTGCG...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR GCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGACGCCGGGCGGCTaGCAGGGCCTTGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCLTPGG*QGLGLE
Trigger: CTCAAGCCCAAGGCCCTGGCAGCCGCCCGGCGTCAG...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR GCA 90 bp GGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCGGTCAGGGCTGGAGCTaGAGCAGGAGCCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GCLRSCVCGRRGSAGSSLGQGWS*SRSRSG
Trigger: CCCACTCCGGCTCCTGCTGCAGCTCCAGCCCTGACC...GAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGGGTCAGGGCTGGAGCTaGAGCAGGAGCCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRGQGWS*SRSRSG
Trigger: CCCACTCCGGCTCCTGCTGCAGCTCCAGCCCTGACC...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp ACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCCACTCTTGGGATGGGGACCAGGTaGGCTCGGCGAAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TRTQGGQGPAPPFSLSTLGMGTR*ARRSCA
Trigger: AGCACAGCTTCGCCGAGCCCACCTGGTCCCCATCCC...AAGAGTGGAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp TGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTTGCCAAGGCCGGGATaGGGACCAGGTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: CLRSCVCGRRGSAGSSLSLPRPG*GPGGLG
Trigger: GCCGAGCCCACCTGGTCCCCATCCCGGCCTTGGCAA...GGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp AACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCCACTCTCTTGGGGGTCCGCCCTaGATCCCTGTCTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: NQNPGRSGSGSPILPLHSLGGPP*IPVSAL
Trigger: CAGAGCCGAGACAGGGATCCAGGGCGGACCCCCAAG...AGAGTGGAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGCAGCAGGAGCCGGAGTaGGAGTTGGAGCCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRQQEPE*ELEPEP
Trigger: CGGCTCCGGCTCCAACTCCCACTCCGGCTCCTGCTG...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TTTCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCGGAAGGGGTCAGGGCTaGAGCTGCAGCAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: FHLQPEPREVRVRLPHSPGRGQG*SCSRSR
Trigger: CCGGCTCCTGCTGCAGCTCCAGCCCTGACCCCTTCC...GGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTGGAAGGGGTCAGGGCTaGAGCTGCAGCAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSGRGQG*SCSRSR
Trigger: CCGGCTCCTGCTGCAGCTCCAGCCCTGACCCCTTCC...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCCCTTACACAGCCTGTaGAGGCGGGTGGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCPLHSL*RRVGGQ
Trigger: CTGCCCGCCCACCCGCCTGCACAGGCTGTGTAAGGG...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTCTTGGGGGTCCGCCCTaGATCCCTGTCTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGLGGPP*IPVSAL
Trigger: CAGAGCCGAGACAGGGATCCAGGGCGGACCCCCAAG...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCTTGGTCCCCGACACTaGGAGGCCCCGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDLGPRH*EAPQAQ
Trigger: CTGCGCCTGCGGGGCCTCCCAGTGTCGGGGACCAAG...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR CCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTCTTGGTCCCCGACACTaGGAGGCCCCGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCLGPRH*EAPQAQ
Trigger: CTGCGCCTGCGGGGCCTCCCAGTGTCGGGGACCAAG...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR CCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCAGCAGGAGCCGGAGTaGGAGTTGGAGCCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCQQEPE*ELEPEP
Trigger: CGGCTCCGGCTCCAACTCCCACTCCGGCTCCTGCTG...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATGCAGGACCCCAGGGCTaGAGAGGAAAGGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDAGPQG*RGKGPC
Trigger: GCACGGCCCCTTTCCTCTTCAGCCCTGGGGTCCTGC...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTGGAAGAGGTGGCCTGTaGGATGCTGCGCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGGRGGL*DAALGL
Trigger: CAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCC...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGGGAAGAGGTGGCCTGTaGGATGCTGCGCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRGRGGL*DAALGL
Trigger: CAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCC...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTGACGGTGAAGGACCCTaGGAGGCCTGCAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSDGEGP*EACRQQ
Trigger: TTGCTGCCTGCAGGCCTCTCAGGGTCCTTCACCGTC...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp CTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTCCAGGTGGCCTGTGAGATaGTGCGCTGGGCTTGACCGA +
Preference number: 4 (lower is better)
Translates to: LRSCVCGRRGSAGSSLSSRWPVR*CAGLDR
Trigger: TCGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCT...GGAGGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR GCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAACGAGCCAGCCAGCGTaGAGGCTGGAGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRTSQPA*RLEAAL
Trigger: CAGGGCTGCCTCCAGCCTGCACGCTGGCTGGCTCGT...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS-3UTR CCA 90 bp TTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGACCCTTCCCACAGAGATaGCCCAGGAGGACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FRRQVGLEVVSDPVSAVGPFPQR*PRRTQG
Trigger: GCCCTGGGTCCTCCTGGGCCATCTCTGTGGGAAGGG...TCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTGCTAGGGACTCCTGGTaGGCAGGGAGTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSARDSW*AGSEGR
Trigger: TCTCCCCTCACTCCCTGCCCACCAGGAGTCCCTAGC...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCGCTAGGGACTCCTGGTaGGCAGGGAGTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CLRSCVCGRRGSAGSSLSARDSW*AGSEGR
Trigger: TCTCCCCTCACTCCCTGCCCACCAGGAGTCCCTAGC...GGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTCCGGTATCCGCGGCACGTaGAAGAGGTGGCCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LRSCVCGRRGSAGSSLSSGIRGT*KRWPVR
Trigger: TCTCACAGGCCACCTCTTCCACGTGCCGCGGATACC...GGAGGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGGAAGGGGTCAGGGCTaGAGCTGCAGCAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCGRGQG*SCSRSR
Trigger: CCGGCTCCTGCTGCAGCTCCAGCCCTGACCCCTTCC...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGCCTGGCAGGCTGGTaGGAGCTGCAGTTGTTGGCG +
Preference number: 4 (lower is better)
Translates to: FRRQVGLEVVSDPVSAVGGLAGW*ELQLLA
Trigger: CGCCAACAACTGCAGCTCCCACCAGCCTGCCAGGCC...TCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTCCAGGAGCAAGGCTGTGTaGAAAGCGGGGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRSCVCGRRGSAGSSLSSRSKAV*KAGLQG
Trigger: ACCCTGGAGCCCCGCTTTCCACACAGCCTTGCTCCT...GGAGGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGGGCCAGCGCCATTCTaGGGCTACGAGCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCGPAPF*GYEPAS
Trigger: GCTGGCTGGCTCGTAGCCCCAGAATGGCGCTGGCCC...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS-3UTR TCA 90 bp ATCCATGAGGTCTCTGAAGGAAGCAGCAAGCAGCTTGTTTGCCGTGGCCAGCAGGCAGGACCCCAGGGCTaGAGAGGAAAGGGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: IHEVSEGSSKQLVCRGQQAGPQG*RGKGPC
Trigger: GCACGGCCCCTTTCCTCTTCAGCCCTGGGGTCCTGC...CTGCTGGCCACGGCAAACAAGCTGCTTGCTGCTTCCTTCAGAGACCTCATGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR GCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAAGCCGCCAGGGTCATTaGCAAGGCCGGGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRSRQGH*QGRDGD
Trigger: GTCCCCATCCCGGCCTTGGCAATGACCCTGGCGGCT...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR GCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTCTCCGATCCTGTGTCTaGGGTAGGAGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGLRSCV*GRRGSA
Trigger: AGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTTTGGCGGGATATGCGTaGCCAGCCCCCTTACACAGC +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGLAGYA*PAPLHS
Trigger: GCTGTGTAAGGGGGCTGGGCACGCATATCCCGCCAA...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGTTGGCGGGATATGCGTaGCCAGCCCCCTTACACAGC +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRLAGYA*PAPLHS
Trigger: GCTGTGTAAGGGGGCTGGGCACGCATATCCCGCCAA...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp TGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCAGGTGGCCTGTGAGATaGTGCGCTGGGCTTGACCGT +
Preference number: 4 (lower is better)
Translates to: CLRSCVCGRRGSAGSSLSRWPVR*CAGLDR
Trigger: ACGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCT...GGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS-3UTR CCA 90 bp AACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCCACTCTATGATTTGGGAACGCTaGGAGGAAGCCGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NQNPGRSGSGSPILPLHSMIWER*EEAARV
Trigger: GACCCTGGCGGCTTCCTCCCAGCGTTCCCAAATCAT...AGAGTGGAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGTTCCCCCTGGGCTTaGACTCCCTCCAACGTTGGG +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGSSPWA*TPSNVG
Trigger: CCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACT...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCCCTGTCTCGGCTCTaGGGGCATGTACTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SSPTRTQGGQGPAPPFSLSLSRL*GHVLVV
Trigger: TACCACCAGTACATGCCCCCAGAGCCGAGACAGGGA...GAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGACTTGGGGGTCCGCCCTaGATCCCTGTCTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRLGGPP*IPVSAL
Trigger: CAGAGCCGAGACAGGGATCCAGGGCGGACCCCCAAG...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTCCCTTCCCACAGAGATaGCCCAGGAGGACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCPFPQR*PRRTQG
Trigger: GCCCTGGGTCCTCCTGGGCCATCTCTGTGGGAAGGG...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGACCCTTCCCACAGAGATaGCCCAGGAGGACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRPFPQR*PRRTQG
Trigger: GCCCTGGGTCCTCCTGGGCCATCTCTGTGGGAAGGG...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGCTAGGGACTCCTGGTaGGCAGGGAGTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ACQQHFRRQVGLEVVSDPARDSW*AGSEGR
Trigger: TCTCCCCTCACTCCCTGCCCACCAGGAGTCCCTAGC...AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGGGGAGGAGGAGTTCGTaGGAGACGGGAGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRGRRSS*ETGVKR
Trigger: CCTCTTCACTCCCGTCTCCCACGAACTCCTCCTCCC...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTAGTCCGTGGGGTCCCTaGGAGAAGGGGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ACQQHFRRQVGLEVVSDPSPWGP*EKGRRS
Trigger: ACTCCTCCTCCCCTTCTCCCAGGGACCCCACGGACT...AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTAGTCCGTGGGGTCCCTaGGAGAAGGGGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCSPWGP*EKGRRS
Trigger: ACTCCTCCTCCCCTTCTCCCAGGGACCCCACGGACT...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTGGAGGCAGGTGGGGTTaGAGGTTGTCTCCGATCCTG +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGGGRWG*RLSPIL
Trigger: CAGGATCGGAGACAACCTCCAACCCCACCTGCCTCC...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCGGGAGCTGCAGTTGTTaGCGGGATATGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GCLRSCVCGRRGSAGSSLGSCSC*RDMRAQ
Trigger: CTGGGCACGCATATCCCGCCAACAACTGCAGCTCCC...GAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATGGCCTGGCAGGCTGGTaGGAGCTGCAGTTGTTGGCG +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDGLAGW*ELQLLA
Trigger: CGCCAACAACTGCAGCTCCCACCAGCCTGCCAGGCC...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGAGCAAGGCTGTGTaGAAAGCGGGGCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRRSKAV*KAGLQG
Trigger: ACCCTGGAGCCCCGCTTTCCACACAGCCTTGCTCCT...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTGTCCGGATCCGAGACTaGAGAGACGGTGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSVRIRD*RDGEGP
Trigger: GGGTCCTTCACCGTCTCTCCAGTCTCGGATCCGGAC...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGGAAGAGGTGGCCTGTaGGATGCTGCGCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCGRGGL*DAALGL
Trigger: CAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCC...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp GCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTCCAGGGAGCAAGACTTaGTTGCTGGGAGATGGGCGC +
Preference number: 4 (lower is better)
Translates to: ACQQHFRRQVGLEVVSDPPGSKT*LLGDGR
Trigger: GCGCCCATCTCCCAGCAATCAAGTCTTGCTCCCTGG...AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATGACGGTGAAGGACCCTaGGAGGCCTGCAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDDGEGP*EACRQQ
Trigger: TTGCTGCCTGCAGGCCTCTCAGGGTCCTTCACCGTC...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTCCCACAGCCGGCTGCTaGTGGAGTCAGATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGPTAGC*WSQISQ
Trigger: CTGACTTATCTGACTCCAGCAGCAGCCGGCTGTGGG...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTCCCACAGCCGGCTGCTaGTGGAGTCAGATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSPTAGC*WSQISQ
Trigger: CTGACTTATCTGACTCCAGCAGCAGCCGGCTGTGGG...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCGGTCCCACAGCCGGCTaGTGCTGGAGTCAGATAAGT +
Preference number: 4 (lower is better)
Translates to: GCLRSCVCGRRGSAGSSLGPTAG*CWSQIS
Trigger: ACTTATCTGACTCCAGCAGCAGCCGGCTGTGGGACC...GAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTGGTCCCACAGCCGGCTaGTGCTGGAGTCAGATAAGT +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGGPTAG*CWSQIS
Trigger: ACTTATCTGACTCCAGCAGCAGCCGGCTGTGGGACC...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp TTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGACTCCGATCCTGTGTCTaGGGTAGGAGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FRRQVGLEVVSDPVSAVGLRSCV*GRRGSA
Trigger: AGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG...TCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCGTTGTTGGCGGGATATaGGTGCCCAGCCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: GCLRSCVCGRRGSAGSSLVVGGI*VPSPLT
Trigger: TGTAAGGGGGCTGGGCACGCATATCCCGCCAACAAC...GAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGCAGGCTGGTGGGAGCTaGAGTTGTTGGCGGGATATG +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRQAGGS*SCWRDM
Trigger: CATATCCCGCCAACAACTGCAGCTCCCACCAGCCTG...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTAGGAGGACAATATTCTaGCTCGGGGAGCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSRRTIF*LGEQDP
Trigger: GGGGTCCTGCTCCCCGAGCCAGAATATTGTCCTCCT...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGACAATATTCTaGCTCGGGGAGCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGRRTIF*LGEQDP
Trigger: GGGGTCCTGCTCCCCGAGCCAGAATATTGTCCTCCT...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTCCGGGAGACTCCTTCTTTaGGGACCTCCAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LRSCVCGRRGSAGSSLSSGRLLL*GPPRRT
Trigger: TGTCCTCCTTGGAGGTCCCCAAAGAAGGAGTCTCCC...GGAGGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp ATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCGACTCCCTCCAACGTTaGGAGATCTTGGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: ISNQNPGRSGSGSPILPLDSLQR*EILGDS
Trigger: GGAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTC...GAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp GCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTAGTTCCCCCTGGGCTTaGACTCCCTCCAACGTTGGG +
Preference number: 4 (lower is better)
Translates to: ACQQHFRRQVGLEVVSDPSSPWA*TPSNVG
Trigger: CCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACT...AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp AACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCCACTCTATGTCAAGTTCCCCCTaGGCTTGGACTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: NQNPGRSGSGSPILPLHSMSSSP*AWTPSN
Trigger: GTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACAT...AGAGTGGAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTTCCCTGTCTCGGCTCTaGGGGCATGTACTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGSLSRL*GHVLVV
Trigger: TACCACCAGTACATGCCCCCAGAGCCGAGACAGGGA...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCCTTCATCCTAGGATGTaGCTGCTGCGAGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSPTRTQGGQGPAPPFSLLHPRM*LLRVCP
Trigger: GGGACAGACTCGCAGCAGCCACATCCTAGGATGAAG...GAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTAGTCCGTGGGGTCCCTaGGAGAAGGGGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCSPWGP*EKGRRS
Trigger: ACTCCTCCTCCCCTTCTCCCAGGGACCCCACGGACT...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGACAGCCGGCTGCTGCTaGAGTCAGATAAGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRTAGCC*SQISQR
Trigger: CCGCTGACTTATCTGACTCCAGCAGCAGCCGGCTGT...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGGAGGCAGGTGGGGTTaGAGGTTGTCTCCGATCCTG +
Preference number: 4 (lower is better)
Translates to: ACQQHFRRQVGLEVVSDPGGRWG*RLSPIL
Trigger: CAGGATCGGAGACAACCTCCAACCCCACCTGCCTCC...AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGTCCGGATCCGAGACTaGAGAGACGGTGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: FRRQVGLEVVSDPVSAVGVRIRD*RDGEGP
Trigger: GGGTCCTTCACCGTCTCTCCAGTCTCGGATCCGGAC...TCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp ACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCCACTCTTAGAGGAGAAAACAGATaGGAGGCCTTCAGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: TRTQGGQGPAPPFSLSTLRGENR*EAFRVR
Trigger: CCGGACTCTGAAGGCCTCTCATCTGTTTTCTCCTCT...AAGAGTGGAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR TCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTAGACTGGAGAGACGGTaGAGGACCCTGAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCRLERR*RTLRGL
Trigger: CAGGCCTCTCAGGGTCCTTCACCGTCTCTCCAGTCT...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAAGACTGGAGAGACGGTaGAGGACCCTGAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRRLERR*RTLRGL
Trigger: CAGGCCTCTCAGGGTCCTTCACCGTCTCTCCAGTCT...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp TGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGCTAGGATGTGGCTGCTaGGAGTCTGTCCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CQQHFRRQVGLEVVSDPVLGCGC*ESVPSH
Trigger: GTGGGAAGGGACAGACTCGCAGCAGCCACATCCTAG...CACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTAGGATGTGGCTGCTaGGAGTCTGTCCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCLGCGC*ESVPSH
Trigger: GTGGGAAGGGACAGACTCGCAGCAGCCACATCCTAG...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAAGGTGGCCTGTGAGATaGTGCGCTGGGCTTGACCGA +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRRWPVR*CAGLDR
Trigger: TCGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCT...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR GCA 90 bp TGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGCAGGCTGGTGGGAGCTaGAGTTGTTGGCGGGATATG +
Preference number: 4 (lower is better)
Translates to: CQQHFRRQVGLEVVSDPVQAGGS*SCWRDM
Trigger: CATATCCCGCCAACAACTGCAGCTCCCACCAGCCTG...CACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATTGGCCTGTGAGATGCTaGGCTGGGCTTGACCGTCAG +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDWPVRC*AGLDRQ
Trigger: CTGACGGTCAAGCCCAGCGCAGCATCTCACAGGCCA...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS-3UTR CCA 90 bp TTTTTCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCGGCGAAGCTGTGCTCTaGGGCGGGTTGAGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: FFISNQNPGRSGSGSPILGEAVL*GGLSLE
Trigger: CTCTAGACTCAACCCGCCCCAGAGCACAGCTTCGCC...GAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp GCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTAGGAGGACAATATTCTaGCTCGGGGAGCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: ACQQHFRRQVGLEVVSDPRRTIF*LGEQDP
Trigger: GGGGTCCTGCTCCCCGAGCCAGAATATTGTCCTCCT...AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTATGTCAAGTTCCCCCTaGGCTTGGACTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGMSSSP*AWTPSN
Trigger: GTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACAT...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGATGTCAAGTTCCCCCTaGGCTTGGACTCCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRMSSSP*AWTPSN
Trigger: GTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACAT...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp ACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCCACTCTTTCTGGGGGCATGTACTaGTGGTATGTCAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: TRTQGGQGPAPPFSLSTLSGGMY*WYVKFP
Trigger: GGGGAACTTGACATACCACCAGTACATGCCCCCAGA...AAGAGTGGAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp TTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGATCCCTGTCTCGGCTCTaGGGGCATGTACTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: FRRQVGLEVVSDPVSAVGSLSRL*GHVLVV
Trigger: TACCACCAGTACATGCCCCCAGAGCCGAGACAGGGA...TCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCCTTCATCCTAGGATGTaGCTGCTGCGAGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: CLRSCVCGRRGSAGSSLSLHPRM*LLRVCP
Trigger: GGGACAGACTCGCAGCAGCCACATCCTAGGATGAAG...GGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAGGTATCCGCGGCACGTaGAAGAGGTGGCCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRGIRGT*KRWPVR
Trigger: TCTCACAGGCCACCTCTTCCACGTGCCGCGGATACC...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGGTATCCGCGGCACGTaGAAGAGGTGGCCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCGIRGT*KRWPVR
Trigger: TCTCACAGGCCACCTCTTCCACGTGCCGCGGATACC...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TTTTTCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCGGGAGGAGGAGTTCGTaGGAGACGGGAGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FFISNQNPGRSGSGSPILGRRSS*ETGVKR
Trigger: CCTCTTCACTCCCGTCTCCCACGAACTCCTCCTCCC...GAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATGGGAGGAGGAGTTCGTaGGAGACGGGAGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDGRRSS*ETGVKR
Trigger: CCTCTTCACTCCCGTCTCCCACGAACTCCTCCTCCC...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTACAGCCGGCTGCTGCTaGAGTCAGATAAGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCTAGCC*SQISQR
Trigger: CCGCTGACTTATCTGACTCCAGCAGCAGCCGGCTGT...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAGGAGGCAGGTGGGGTTaGAGGTTGTCTCCGATCCTG +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRGGRWG*RLSPIL
Trigger: CAGGATCGGAGACAACCTCCAACCCCACCTGCCTCC...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAGGGAGCTGCAGTTGTTaGCGGGATATGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRGSCSC*RDMRAQ
Trigger: CTGGGCACGCATATCCCGCCAACAACTGCAGCTCCC...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGCTGTGGATCCGAAGCTaGAGGACTGTGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CQQHFRRQVGLEVVSDPVLWIRS*RTVEGG
Trigger: TCCTCCCTCCACAGTCCTCCAGCTTCGGATCCACAG...CACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTGGAACTTGGAGCGAATaGTTTGGGAACGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCGTWSE*FGNAGR
Trigger: CCTCCCAGCGTTCCCAAATCATTCGCTCCAAGTTCC...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR TCA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTACTGGATTCTGCTCCTaGTTCCGTCTGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSTGFCS*FRLWIR
Trigger: TCGGATCCACAGACGGAATCAGGAGCAGAATCCAGT...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTCCCACAGCCGGCTGCTaGTGGAGTCAGATAAGTCAG +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCPTAGC*WSQISQ
Trigger: CTGACTTATCTGACTCCAGCAGCAGCCGGCTGTGGG...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTTGTTGGCGGGATATaGGTGCCCAGCCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCVVGGI*VPSPLT
Trigger: TGTAAGGGGGCTGGGCACGCATATCCCGCCAACAAC...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGTTGGAGCGAATGATTTaGGAACGCTGGGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRLERMI*ERWEEA
Trigger: GGCTTCCTCCCAGCGTTCCCAAATCATTCGCTCCAA...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTGGGAGACTCCTTCTTTaGGGACCTCCAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCGRLLL*GPPRRT
Trigger: TGTCCTCCTTGGAGGTCCCCAAAGAAGGAGTCTCCC...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCAACGTTGGGAGATCTTaGGAGACTCCTTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SSPTRTQGGQGPAPPFSLNVGRS*ETPSLG
Trigger: CCCCAAAGAAGGAGTCTCCCAAGATCTCCCAACGTT...GAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTGACTCCCTCCAACGTTaGGAGATCTTGGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCDSLQR*EILGDS
Trigger: GGAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTC...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGGCATGTACTGGTaGTATGTCAAGTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: FRRQVGLEVVSDPVSAVGGGMYW*YVKFPL
Trigger: CAGGGGGAACTTGACATACCACCAGTACATGCCCCC...TCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTCTGGGGGCATGTACTaGTGGTATGTCAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: CLRSCVCGRRGSAGSSLSSGGMY*WYVKFP
Trigger: GGGGAACTTGACATACCACCAGTACATGCCCCCAGA...GGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGACTTCATCCTAGGATGTaGCTGCTGCGAGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FRRQVGLEVVSDPVSAVGLHPRM*LLRVCP
Trigger: GGGACAGACTCGCAGCAGCCACATCCTAGGATGAAG...TCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCTGTGGATCCGAAGCTaGAGGACTGTGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDLWIRS*RTVEGG
Trigger: TCCTCCCTCCACAGTCCTCCAGCTTCGGATCCACAG...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp TGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGACTGGATTCTGCTCCTaGTTCCGTCTGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: CQQHFRRQVGLEVVSDPVTGFCS*FRLWIR
Trigger: TCGGATCCACAGACGGAATCAGGAGCAGAATCCAGT...CACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAATCCTAGGATGTGGCTaGTGCGAGTCTGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRILGCG*CESVPS
Trigger: GGAAGGGACAGACTCGCAGCAGCCACATCCTAGGAT...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTAGCAAGCAGCTTGTTTaGCGTGGCCAGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCSKQLV*RGQQQK
Trigger: CTTTTGCTGCTGGCCACGGCAAACAAGCTGCTTGCT...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp TCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCTTGTCTCAGGCTCTaGTTCCAAGAGAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: SSPTRTQGGQGPAPPFSLSCLRL*FQEKLI
Trigger: GATCAGCTTCTCTTGGAAGCAGAGCCTGAGACAAGA...GAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATGGGAGACTCCTTCTTTaGGGACCTCCAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDGRLLL*GPPRRT
Trigger: TGTCCTCCTTGGAGGTCCCCAAAGAAGGAGTCTCCC...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCAACGTTGGGAGATCTTaGGAGACTCCTTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GCLRSCVCGRRGSAGSSLNVGRS*ETPSLG
Trigger: CCCCAAAGAAGGAGTCTCCCAAGATCTCCCAACGTT...GAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATGACTCCCTCCAACGTTaGGAGATCTTGGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDDSLQR*EILGDS
Trigger: GGAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTC...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp ATCCATGAGGTCTCTGAAGGAAGCAGCAAGCAGCTTGTTTGCCGTGGCCAGCAGTCCGAGATCTGCTCCTaGTTCCGTCTGTGGATCCGA +
Preference number: 4 (lower is better)
Translates to: IHEVSEGSSKQLVCRGQQSEICS*FRLWIR
Trigger: TCGGATCCACAGACGGAATCAGGAGCAGATCTCGGA...CTGCTGGCCACGGCAAACAAGCTGCTTGCTGCTTCCTTCAGAGACCTCATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR TCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTAGAGGAGAAAACAGATaGGAGGCCTTCAGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCRGENR*EAFRVR
Trigger: CCGGACTCTGAAGGCCTCTCATCTGTTTTCTCCTCT...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR TCA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAAGAGGAGAAAACAGATaGGAGGCCTTCAGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRRGENR*EAFRVR
Trigger: CCGGACTCTGAAGGCCTCTCATCTGTTTTCTCCTCT...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTAGCAAGCAGCTTGTTTaGCGTGGCCAGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCSKQLV*RGQQQK
Trigger: CTTTTGCTGCTGGCCACGGCAAACAAGCTGCTTGCT...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATAGCAAGCAGCTTGTTTaGCGTGGCCAGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDSKQLV*RGQQQK
Trigger: CTTTTGCTGCTGGCCACGGCAAACAAGCTGCTTGCT...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTAACGTTGGGAGATCTTaGGAGACTCCTTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ACQQHFRRQVGLEVVSDPNVGRS*ETPSLG
Trigger: CCCCAAAGAAGGAGTCTCCCAAGATCTCCCAACGTT...AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATTCTGGGGGCATGTACTaGTGGTATGTCAAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDSGGMY*WYVKFP
Trigger: GGGGAACTTGACATACCACCAGTACATGCCCCCAGA...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTTTGATTGCTGGGAGATaGGCGCCTGAACTGGATTCT +
Preference number: 4 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCLIAGR*APELDS
Trigger: AGAATCCAGTTCAGGCGCCCATCTCCCAGCAATCAA...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CCA 90 bp TGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTTGATTGCTGGGAGATaGGCGCCTGAACTGGATTCT +
Preference number: 4 (lower is better)
Translates to: CQQHFRRQVGLEVVSDPVLIAGR*APELDS
Trigger: AGAATCCAGTTCAGGCGCCCATCTCCCAGCAATCAA...CACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR GCA 90 bp CTGGCATTTATATCTTGTCTCAGGCTCTGCTTCCAAGAGAAGCTGATCTTAGACCGCAGGCGCAGCTGCTaGCGGAGCTCTGAGACCGTC +
Preference number: 4 (lower is better)
Translates to: LAFISCLRLCFQEKLILDRRRSC*RSSETV
Trigger: GACGGTCTCAGAGCTCCGGCAGCAGCTGCGCCTGCG...GTCTAAGATCAGCTTCTCTTGGAAGCAGAGCCTGAGACAAGATATAAATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp CATCCAAAAGGCATAACCACCTTCCAGGCTCCCCAAACAACAGGGAGCCATCTAACAGCCGGCTGCTGCTaGAGTCAGATAAGTCAGCGG +
Preference number: 4 (lower is better)
Translates to: HPKGITTFQAPQTTGSHLTAGCC*SQISQR
Trigger: CCGCTGACTTATCTGACTCCAGCAGCAGCCGGCTGT...TAGATGGCTCCCTGTTGTTTGGGGAGCCTGGAAGGTGGTTATGCCTTTTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp CATCCAAAAGGCATAACCACCTTCCAGGCTCCCCAAACAACAGGGAGCCATCTAGGGGGCATGTACTGGTaGTATGTCAAGTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: HPKGITTFQAPQTTGSHLGGMYW*YVKFPL
Trigger: CAGGGGGAACTTGACATACCACCAGTACATGCCCCC...TAGATGGCTCCCTGTTGTTTGGGGAGCCTGGAAGGTGGTTATGCCTTTTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR GCA 90 bp CTGGCATTTATATCTTGTCTCAGGCTCTGCTTCCAAGAGAAGCTGATCTTAGACCTCCGATCCTGTGTCTaGGGTAGGAGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LAFISCLRLCFQEKLILDLRSCV*GRRGSA
Trigger: AGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG...GTCTAAGATCAGCTTCTCTTGGAAGCAGAGCCTGAGACAAGATATAAATGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CCA 90 bp CTGGCATTTATATCTTGTCTCAGGCTCTGCTTCCAAGAGAAGCTGATCTTAGACAGTTCCCCCTGGGCTTaGACTCCCTCCAACGTTGGG +
Preference number: 4 (lower is better)
Translates to: LAFISCLRLCFQEKLILDSSPWA*TPSNVG
Trigger: CCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACT...GTCTAAGATCAGCTTCTCTTGGAAGCAGAGCCTGAGACAAGATATAAATGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR GCA 90 bp ATTTATATCTTGTCTCAGGCTCTGCTTCCAAGAGAAGCTGATCTTAGACCTGATCTAGGATGTGGCTGCTaGGAGTCTGTCCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: IYILSQALLPREADLRPDLGCGC*ESVPSH
Trigger: GTGGGAAGGGACAGACTCGCAGCAGCCACATCCTAG...ATCAGGTCTAAGATCAGCTTCTCTTGGAAGCAGAGCCTGAGACAAGATATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR GCA 90 bp ATTTATATCTTGTCTCAGGCTCTGCTTCCAAGAGAAGCTGATCTTAGACCTGATGGTCCCACAGCCGGCTaGTGCTGGAGTCAGATAAGT +
Preference number: 4 (lower is better)
Translates to: IYILSQALLPREADLRPDGPTAG*CWSQIS
Trigger: ACTTATCTGACTCCAGCAGCAGCCGGCTGTGGGACC...ATCAGGTCTAAGATCAGCTTCTCTTGGAAGCAGAGCCTGAGACAAGATATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS GCA 90 bp AGGCGGGTGGGCGGGCAGCAGGCTCCCTTCCTCGGGCCTCCCGCCTaGTCCCTGCCAGCGCAGCGCCGCGGGCCAGCGCCATTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: RRVGGQQAPFLGPPA*SLPAQRRGPAPFWG
Trigger: GCCCCAGAATGGCGCTGGCCCGCGGCGCTGCGCTGGCAGGGAGCAGGCGGGAGGCCCGAGGAAGGGAGCCTGCTGCCCGCCCACCCGCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS CCA 90 bp CGGGATATGCGTGCCCAGCCCCCTTACACAGCCTGTGCAGGCGGGTaGGCGGGCAGCAGGCTCCCTTCCTCGGGCCTCCCGCCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: RDMRAQPPYTACAGG*AGSRLPSSGLPPAP
Trigger: GGGAGCAGGCGGGAGGCCCGAGGAAGGGAGCCTGCTGCCCGCCCACCCGCCTGCACAGGCTGTGTAAGGGGGCTGGGCACGCATATCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS CCA 90 bp TGGAGCCGGAGCCGTCCCCGGGGTATCCGCGGCACGTGGAAGAGGTaGCCTGTGAGATGCTGCGCTGGGCTTGACCGAGCCCTGACGCCG +
Preference number: 5 (lower is better)
Translates to: WSRSRPRGIRGTWKR*PVRCCAGLDRALTP
Trigger: CGGCGTCAGGGCTCGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGATACCCCGGGGACGGCTCCGGCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS GCA 90 bp CAGTTGTTGGCGGGATATGCGTGCCCAGCCCCCTTACACAGCCTGTaGAGGCGGGTGGGCGGGCAGCAGGCTCCCTTCCTCGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: QLLAGYACPAPLHSL*RRVGGQQAPFLGPP
Trigger: GGGAGGCCCGAGGAAGGGAGCCTGCTGCCCGCCCACCCGCCTGCACAGGCTGTGTAAGGGGGCTGGGCACGCATATCCCGCCAACAACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS GCA 90 bp GGCCTGGCAGGCTGGTGGGAGCTGCAGTTGTTGGCGGGATATGCGTaGCCAGCCCCCTTACACAGCCTGTGCAGGCGGGTGGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLAGWWELQLLAGYA*PAPLHSLCRRVGGQ
Trigger: CTGCCCGCCCACCCGCCTGCACAGGCTGTGTAAGGGGGCTGGGCACGCATATCCCGCCAACAACTGCAGCTCCCACCAGCCTGCCAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS GCA 90 bp GCCTGGCCTGGCAGGCTGGTGGGAGCTGCAGTTGTTGGCGGGATATaGGTGCCCAGCCCCCTTACACAGCCTGTGCAGGCGGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: AWPGRLVGAAVVGGI*VPSPLTQPVQAGGR
Trigger: CCGCCCACCCGCCTGCACAGGCTGTGTAAGGGGGCTGGGCACGCATATCCCGCCAACAACTGCAGCTCCCACCAGCCTGCCAGGCCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS CCA 90 bp AGTGGGAGTTGGAGCCGGAGCCGTCCCCGGGGTATCCGCGGCACGTaGAAGAGGTGGCCTGTGAGATGCTGCGCTGGGCTTGACCGAGCC +
Preference number: 5 (lower is better)
Translates to: SGSWSRSRPRGIRGT*KRWPVRCCAGLDRA
Trigger: GGCTCGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGATACCCCGGGGACGGCTCCGGCTCCAACTCCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS CCA 90 bp TGGAGCCGGAGCCGTCCCCGGGGTATCCGCGGCACGTGGAAGAGGTaGCCTGTGAGATGCTGCGCTGGGCTTGACCGTCAGCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: WSRSRPRGIRGTWKR*PVRCCAGLDRQLLQ
Trigger: CTGGAGGAGCTGACGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGATACCCCGGGGACGGCTCCGGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS CCA 90 bp CATCCTAGGATGTGGCTGCTGCGAGTCTGTCCCTTCCCACAGAGATaGCCCAGGAGGACCCAGGGCGGACCCCTCGGCTTGGGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: HPRMWLLRVCPFPQR*PRRTQGGPLGLGVR
Trigger: GCGGACCCCCAAGCCGAGGGGTCCGCCCTGGGTCCTCCTGGGCCATCTCTGTGGGAAGGGACAGACTCGCAGCAGCCACATCCTAGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000599703.1
CDS CCA 90 bp AGTGGGAGTTGGAGCCGGAGCCGTCCCCGGGGTATCCGCGGCACGTaGAAGAGGTGGCCTGTGAGATGCTGCGCTGGGCTTGACCGTCAG +
Preference number: 5 (lower is better)
Translates to: SGSWSRSRPRGIRGT*KRWPVRCCAGLDRQ
Trigger: CTGACGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGATACCCCGGGGACGGCTCCGGCTCCAACTCCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS-3UTR CAA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGGGCGGACCCCTCGGCTaGGGGGTCCGCCCTGGATCC +
Preference number: 5 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRGGPLG*GVRPGS
Trigger: GGATCCAGGGCGGACCCCCAAGCCGAGGGGTCCGCC...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp CCCCCAACCATACCACGCCGGAGGGGGATCATAAGGAGGCCAGGTAGGCAAAGTGCGGCTGCCAGGGCCTaGGGCTTGAGGCGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: PPTIPRRRGIIRRPGRQSAAARA*GLRRGQ
Trigger: CTGGCCGCGCCTCAAGCCCAAGGCCCTGGCAGCCGC...ACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGCGTGGTATGGTTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS TCA 90 bp CTGAGGCTGAGATCCACGGGTCCGGATCCGAGACTGGAGAGACGGTaGAGGACCCTGAGAGGCCTGCAGGCAGCAAGCCAGGCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: LRLRSTGPDPRLERR*RTLRGLQAASQAGR
Trigger: CCTCCCGGCCTGGCTTGCTGCCTGCAGGCCTCTCAGGGTCCTTCACCGTCTCTCCAGTCTCGGATCCGGACCCGTGGATCTCAGCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356751.8
ENST00000594582.1
ENST00000599703.1
CDS GCA 90 bp CCAGGCCGGGAGGAGCAAGGCTGTGTGGAAAGCGGGGCTCCAGGGTaGCGGAGGGCAGGCCAGGGAGCAAGACTTGATTGCTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: PGREEQGCVESGAPG*RRAGQGARLDCWEM
Trigger: CATCTCCCAGCAATCAAGTCTTGCTCCCTGGCCTGCCCTCCGGCACCCTGGAGCCCCGCTTTCCACACAGCCTTGCTCCTCCCGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356751.8
ENST00000594582.1
ENST00000599703.1
CDS-3UTR CAA 90 bp TGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGGGCGGACCCCTCGGCTaGGGGGTCCGCCCTGGATCC +
Preference number: 5 (lower is better)
Translates to: CQQHFRRQVGLEVVSDPVGGPLG*GVRPGS
Trigger: GGATCCAGGGCGGACCCCCAAGCCGAGGGGTCCGCC...CACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp TTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGCGGCTGCCAGGGCCTaGGGCTTGAGGCGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: FRRQVGLEVVSDPVSAVGAAARA*GLRRGQ
Trigger: CTGGCCGCGCCTCAAGCCCAAGGCCCTGGCAGCCGC...TCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR CAA 90 bp GGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCGAGCCGGAGTGGGAGTaGGAGCCGGAGCCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: GCLRSCVCGRRGSAGSSLEPEWE*EPEPSP
Trigger: CGGGGACGGCTCCGGCTCCAACTCCCACTCCGGCTC...GAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATGGCGGACCCCTCGGCTaGGGGGTCCGCCCTGGATCC +
Preference number: 5 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDGGPLG*GVRPGS
Trigger: GGATCCAGGGCGGACCCCCAAGCCGAGGGGTCCGCC...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTGAGCCGGAGTGGGAGTaGGAGCCGGAGCCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCEPEWE*EPEPSP
Trigger: CGGGGACGGCTCCGGCTCCAACTCCCACTCCGGCTC...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS CCA 90 bp GGGTCCGCCCTGGATCCCTGTCTCGGCTCTGGGGGCATGTACTGGTaGTATGTCAAGTTCCCCCTGGGCTTGGACTCCCTCCAACGTTGG +
Preference number: 5 (lower is better)
Translates to: GSALDPCLGSGGMYW*YVKFPLGLDSLQRW
Trigger: CCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACATACCACCAGTACATGCCCCCAGAGCCGAGACAGGGATCCAGGGCGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000599703.1
CDS CCA 90 bp GGCTCTGCTCCTGATTCCGTCTGTGGATCCGAAGCTGGAGGACTGTaGAGGGAGGAGGGAGGTGGGAGGAGGAAGGCGGGAAGGGAGTGT +
Preference number: 5 (lower is better)
Translates to: GSAPDSVCGSEAGGL*REEGGGRRKAGREC
Trigger: ACACTCCCTTCCCGCCTTCCTCCTCCCACCTCCCTCCTCCCTCCACAGTCCTCCAGCTTCGGATCCACAGACGGAATCAGGAGCAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595591.1
CDS-3UTR CAA 90 bp TTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGAAAGCCGCCAGGGTCATaGCCAAGGCCGGGATGGGGA +
Preference number: 5 (lower is better)
Translates to: FRRQVGLEVVSDPVSAVGKPPGS*PRPGWG
Trigger: TCCCCATCCCGGCCTTGGCAATGACCCTGGCGGCTT...TCCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CAA 90 bp CTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTCCAAGTTCCCCCTGGGCTaGGACTCCCTCCAACGTTGG +
Preference number: 5 (lower is better)
Translates to: LRSCVCGRRGSAGSSLSSKFPLG*DSLQRW
Trigger: CCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTT...GGAGGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp AACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCTCCACTCTTCCAGGAGCATAGACTaGGTCCCCGACACTGGGAGG +
Preference number: 5 (lower is better)
Translates to: NQNPGRSGSGSPILPLHSSRSID*VPDTGR
Trigger: CCTCCCAGTGTCGGGGACCAAGTCTATGCTCCTGGA...AGAGTGGAGAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CAA 90 bp TCATCTCCAACCAGAACCCAGGGAGGTCAGGGTCCGGCTCCCCCATTCTCCCTCGAAGCAGCAAGCAGCTaGTTTGCCGTGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSPTRTQGGQGPAPPFSLEAASS*FAVASS
Trigger: GCTGCTGGCCACGGCAAACAAGCTGCTTGCTGCTTC...GAGGGAGAATGGGGGAGCCGGACCCTGACCTCCCTGGGTTCTGGTTGGAGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CAA 90 bp CTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCTCCTGGTGGGAGCTGCAGTaGTTGGCGGGATATGCGTGC +
Preference number: 5 (lower is better)
Translates to: LRSCVCGRRGSAGSSLSSWWELQ*LAGYAC
Trigger: GCACGCATATCCCGCCAACAACTGCAGCTCCCACCA...GGAGGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS CCA 90 bp GATTCTGCTCCTGATTCCGTCTGTGGATCCGAAGCTGGAGGACTGTaGAGGGAGGAGGGAGGTGGGAGGAGGAAGGCGGGAAGGGAGTGT +
Preference number: 5 (lower is better)
Translates to: DSAPDSVCGSEAGGL*REEGGGRRKAGREC
Trigger: ACACTCCCTTCCCGCCTTCCTCCTCCCACCTCCCTCCTCCCTCCACAGTCCTCCAGCTTCGGATCCACAGACGGAATCAGGAGCAGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAAGTTCCCCCTGGGCTaGGACTCCCTCCAACGTTGG +
Preference number: 5 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGKFPLG*DSLQRW
Trigger: CCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTT...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTTCCAGGAGCATAGACTaGGTCCCCGACACTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGSRSID*VPDTGR
Trigger: CCTCCCAGTGTCGGGGACCAAGTCTATGCTCCTGGA...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS-3UTR CAA 90 bp GGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCAGGAGGCAGGTGGGGTaGGAGGTTGTCTCCGATCCT +
Preference number: 5 (lower is better)
Translates to: GCLRSCVCGRRGSAGSSLRRQVG*EVVSDP
Trigger: AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCT...GAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGGAAGCAGCAAGCAGCTaGTTTGCCGTGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGREAASS*FAVASS
Trigger: GCTGCTGGCCACGGCAAACAAGCTGCTTGCTGCTTC...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp CTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTAGGTGGGAGCTGCAGTTGTaGGCGGGATATGCGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LQEAGGVGGCLRSCVCGRWELQL*AGYACP
Trigger: TGGGCACGCATATCCCGCCAACAACTGCAGCTCCCA...CCTACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GGTTGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTGGTGGGAGCTGCAGTaGTTGGCGGGATATGCGTGC +
Preference number: 5 (lower is better)
Translates to: GCLRSCVCGRRGSAGSSLWWELQ*LAGYAC
Trigger: GCACGCATATCCCGCCAACAACTGCAGCTCCCACCA...GAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp TGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCGGACTCCCTCCAACGTaGGGAGATCTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: CLRSCVCGRRGSAGSSLSGLPPT*GDLGRL
Trigger: GAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCC...GGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTGAAGCAGCAAGCAGCTaGTTTGCCGTGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCEAASS*FAVASS
Trigger: GCTGCTGGCCACGGCAAACAAGCTGCTTGCTGCTTC...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp TGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGGCCAGGGAGCAAGACTaGATTGCTGGGAGATGGGCG +
Preference number: 5 (lower is better)
Translates to: CQQHFRRQVGLEVVSDPVAREQD*IAGRWA
Trigger: CGCCCATCTCCCAGCAATCAAGTCTTGCTCCCTGGC...CACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS TCA 90 bp GGGTCTGAGGCTGAGATCCACGGGTCCGGATCCGAGATCTGCTCCTaGTTCCGTCTGTGGATCCGAAGCTGGAGGACAGATCGGAACTTG +
Preference number: 5 (lower is better)
Translates to: GSEAEIHGSGSEICS*FRLWIRSWRTDRNL
Trigger: CAAGTTCCGATCTGTCCTCCAGCTTCGGATCCACAGACGGAATCAGGAGCAGATCTCGGATCCGGACCCGTGGATCTCAGCCTCAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS CCA 90 bp GTCTCGGCTCTGGGGGCATGTACTGGTGGTATGTCAAGTTCCCCCTaGGCTTGGACTCCCTCCAACGTTGGGAGATCTTGGGAGACTCCT +
Preference number: 5 (lower is better)
Translates to: VSALGACTGGMSSSP*AWTPSNVGRSWETP
Trigger: AGGAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACATACCACCAGTACATGCCCCCAGAGCCGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
ENST00000599703.1
CDS-3UTR CAA 90 bp TGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGGGACTCCCTCCAACGTaGGGAGATCTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: CQQHFRRQVGLEVVSDPVGLPPT*GDLGRL
Trigger: GAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCC...CACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTAAGTTCCCCCTGGGCTaGGACTCCCTCCAACGTTGG +
Preference number: 5 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCKFPLG*DSLQRW
Trigger: CCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTT...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTAGGTGGGGTTGGAGGTaGTCTCCGATCCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: ACQQHFRRQVGLEVVSDPRWGWR*SPILCL
Trigger: CAGACACAGGATCGGAGACAACCTCCAACCCCACCT...AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAAGGAGGCAGGTGGGGTaGGAGGTTGTCTCCGATCCT +
Preference number: 5 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRRRQVG*EVVSDP
Trigger: AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCT...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp TGTCTCCGATCCTGTGTCTGCGGTAGGAGGGGCTCTGCTGGTAGTTCCCTCTCCCAGCAAGCAGCTTGTTaGCCGTGGCCAGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: CLRSCVCGRRGSAGSSLSQQAAC*PWPAAK
Trigger: TTTTGCTGCTGGCCACGGCAAACAAGCTGCTTGCTG...GGAGAGGGAACTACCAGCAGAGCCCCTCCTACCGCAGACACAGGATCGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTTGGGAGCTGCAGTTGTaGGCGGGATATGCGTGCCCA +
Preference number: 5 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCWELQL*AGYACP
Trigger: TGGGCACGCATATCCCGCCAACAACTGCAGCTCCCA...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAGCCAGGGAGCAAGACTaGATTGCTGGGAGATGGGCG +
Preference number: 5 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRAREQD*IAGRWA
Trigger: CGCCCATCTCCCAGCAATCAAGTCTTGCTCCCTGGC...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS TCA 90 bp GTCTGTGGATCCGAAGCTGGAGGACAGATCGGAACTTGGAGCGAATaGTTTGGGAACGCTGGGAGGAAGCCGCCAGGGTCATTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: VCGSEAGGQIGTWSE*FGNAGRKPPGSLPR
Trigger: CCTTGGCAATGACCCTGGCGGCTTCCTCCCAGCGTTCCCAAATCATTCGCTCCAAGTTCCGATCTGTCCTCCAGCTTCGGATCCACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000599703.1
CDS-3UTR CAA 90 bp GCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCTGCGGTCAACGTTGGGAGATCTaGGGAGACTCCTTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: ALQEAGGVGGCLRSCVCGQRWEI*GDSFFG
Trigger: CCCAAAGAAGGAGTCTCCCAAGATCTCCCAACGTTG...ACCGCAGACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGGACTCCCTCCAACGTaGGGAGATCTTGGGAGACTC +
Preference number: 5 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCGLPPT*GDLGRL
Trigger: GAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCC...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTAGGTGGGGTTGGAGGTaGTCTCCGATCCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCRWGWR*SPILCL
Trigger: CAGACACAGGATCGGAGACAACCTCCAACCCCACCT...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTCAGCAAGCAGCTTGTTaGCCGTGGCCAGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: ACQQHFRRQVGLEVVSDPQQAAC*PWPAAK
Trigger: TTTTGCTGCTGGCCACGGCAAACAAGCTGCTTGCTG...AGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS CCA 90 bp GCTCTGGGGGCATGTACTGGTGGTATGTCAAGTTCCCCCTGGGCTTaGACTCCCTCCAACGTTGGGAGATCTTGGGAGACTCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: ALGACTGGMSSSPWA*TPSNVGRSWETPSL
Trigger: CAAAGAAGGAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACATACCACCAGTACATGCCCCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
ENST00000599703.1
CDS-3UTR CAA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTCAACGTTGGGAGATCTaGGGAGACTCCTTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCQRWEI*GDSFFG
Trigger: CCCAAAGAAGGAGTCTCCCAAGATCTCCCAACGTTG...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCAGCAAGCAGCTTGTTaGCCGTGGCCAGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDQQAAC*PWPAAK
Trigger: TTTTGCTGCTGGCCACGGCAAACAAGCTGCTTGCTG...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTAGGACAGATCGGAACTaGGAGCGAATGATTTGGGAA +
Preference number: 5 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCRTDRN*ERMIWE
Trigger: TTCCCAAATCATTCGCTCCAAGTTCCGATCTGTCCT...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CAA 90 bp AGTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGAGCAAAGTTAAGGCAGTaGCATGTCAGCAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: SCMSAALQEAGGVGGCLRAKLRQ*HVSSTS
Trigger: TGAAGTGCTGCTGACATGCAACTGCCTTAACTTTGC...TCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp ATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGCAAAGTTAAGGCAGTaGCATGTCAGCAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: MSAALQEAGGVGGCLRSCAKLRQ*HVSSTS
Trigger: TGAAGTGCTGCTGACATGCAACTGCCTTAACTTTGC...ACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GTTGCATGTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATGCAAAGTTAAGGCAGTaGCATGTCAGCAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: VACQQHFRRQVGLEVVSDAKLRQ*HVSSTS
Trigger: TGAAGTGCTGCTGACATGCAACTGCCTTAACTTTGC...ATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGACATGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS-3UTR CAA 90 bp GTCAGCAGCACTTCAGGAGGCAGGTGGGGTTGGAGGTTGTCTCCGATCCTGTGTACTGGCATTTATATCTaGTCTCAGGCTCTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: VSSTSGGRWGWRLSPILCTGIYI*SQALLP
Trigger: TGGAAGCAGAGCCTGAGACAAGATATAAATGCCAGT...ACACAGGATCGGAGACAACCTCCAACCCCACCTGCCTCCTGAAGTGCTGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS-3UTR CAA 90 bp ATTTATATCTTGTCTCAGGCTCTGCTTCCAAGAGAAGCTGATCTTAGACCTGATCTTGGAGCGAATGATTaGGGAACGCTGGGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: IYILSQALLPREADLRPDLGAND*GTLGGS
Trigger: GCTTCCTCCCAGCGTTCCCAAATCATTCGCTCCAAG...ATCAGGTCTAAGATCAGCTTCTCTTGGAAGCAGAGCCTGAGACAAGATATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS GCA 72 bp TGCGCTGGGCTTGACCGAGCCCTGACGCCGGGCGGCTaGCAGGGCCTTGGGCTTGAGGCGCGGCCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: CAGLDRALTPGG*QGLGLEARPGS
Trigger: GCTCCCTGGCCGCGCCTCAAGCCCAAGGCCCTGGCAGCCGCCCGGCGTCAGGGCTCGGTCAAGCCCAGCGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS CCA 72 bp TCCCTGCCAGCGCAGCGCCGCGGGCCAGCGCCATTCTaGGGCTACGAGCCAGCCAGCGTGCAGGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: SLPAQRRGPAPF*GYEPASVQAGG
Trigger: GCCTCCAGCCTGCACGCTGGCTGGCTCGTAGCCCCAGAATGGCGCTGGCCCGCGGCGCTGCGCTGGCAGGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS CAA 72 bp GGCGCGCCGCCGCGCATGCGCTCCAGGAGCATAGACTaGGTCCCCGACACTGGGAGGCCCCGCAGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: GAPPRMRSRSID*VPDTGRPRRRS
Trigger: GCTGCGCCTGCGGGGCCTCCCAGTGTCGGGGACCAAGTCTATGCTCCTGGAGCGCATGCGCGGCGGCGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS GCA 72 bp ATCCGCGGCACGTGGAAGAGGTGGCCTGTGAGATGCTaGGCTGGGCTTGACCGAGCCCTGACGCCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: IRGTWKRWPVRC*AGLDRALTPGG
Trigger: GCCGCCCGGCGTCAGGGCTCGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS GCA 72 bp GCGGGATATGCGTGCCCAGCCCCCTTACACAGCCTGTaGAGGCGGGTGGGCGGGCAGCAGGCTCCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: AGYACPAPLHSL*RRVGGQQAPFL
Trigger: GAGGAAGGGAGCCTGCTGCCCGCCCACCCGCCTGCACAGGCTGTGTAAGGGGGCTGGGCACGCATATCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS GCA 72 bp TTGGTCCCCGACACTGGGAGGCCCCGCAGGCGCAGCTaGTGCCGGAGCTCTGAGACCGTCAGCTCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: LVPDTGRPRRRS*CRSSETVSSSS
Trigger: ACTGGAGGAGCTGACGGTCTCAGAGCTCCGGCAGCAGCTGCGCCTGCGGGGCCTCCCAGTGTCGGGGACCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS GCA 72 bp GGTATCCGCGGCACGTGGAAGAGGTGGCCTGTGAGATaGTGCGCTGGGCTTGACCGAGCCCTGACGCCGGGC +
Preference number: 6 (lower is better)
Translates to: GIRGTWKRWPVR*CAGLDRALTPG
Trigger: GCCCGGCGTCAGGGCTCGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGATACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000356751.8
CDS CCA 72 bp TGGAGCCGGAGCCGTCCCCGGGGTATCCGCGGCACGTaGAAGAGGTGGCCTGTGAGATGCTGCGCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: WSRSRPRGIRGT*KRWPVRCCAGL
Trigger: AAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGATACCCCGGGGACGGCTCCGGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS CCA 72 bp GGGCCTCCAGCCAGTCCAGGGAGTCCGTGGGGTCCCTaGGAGAAGGGGAGGAGGAGTTCGTGGGAGACGGGA +
Preference number: 6 (lower is better)
Translates to: GPPASPGSPWGP*EKGRRSSWETG
Trigger: TCCCGTCTCCCACGAACTCCTCCTCCCCTTCTCCCAGGGACCCCACGGACTCCCTGGACTGGCTGGAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
CDS TCA 72 bp CCCGGGGTATCCGCGGCACGTGGAAGAGGTGGCCTGTaGGATGCTGCGCTGGGCTTGACCGTCAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: PGVSAARGRGGL*DAALGLTVSSS
Trigger: GGAGGAGCTGACGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGATACCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS GCA 72 bp GGCTGGTGGGAGCTGCAGTTGTTGGCGGGATATGCGTaGCCAGCCCCCTTACACAGCCTGTGCAGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: GWWELQLLAGYA*PAPLHSLCRRV
Trigger: CACCCGCCTGCACAGGCTGTGTAAGGGGGCTGGGCACGCATATCCCGCCAACAACTGCAGCTCCCACCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS GCA 72 bp GGCAGGCTGGTGGGAGCTGCAGTTGTTGGCGGGATATaGGTGCCCAGCCCCCTTACACAGCCTGTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: GRLVGAAVVGGI*VPSPLTQPVQA
Trigger: CGCCTGCACAGGCTGTGTAAGGGGGCTGGGCACGCATATCCCGCCAACAACTGCAGCTCCCACCAGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356751.8
ENST00000594582.1
CDS TCA 72 bp AGATCCACGGGTCCGGATCCGAGACTGGAGAGACGGTaGAGGACCCTGAGAGGCCTGCAGGCAGCAAGCCAG +
Preference number: 6 (lower is better)
Translates to: RSTGPDPRLERR*RTLRGLQAASQ
Trigger: CTGGCTTGCTGCCTGCAGGCCTCTCAGGGTCCTTCACCGTCTCTCCAGTCTCGGATCCGGACCCGTGGATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356751.8
ENST00000594582.1
ENST00000599703.1
CDS CCA 72 bp CCTGATTCCGTCTGTGGATCCGAAGCTGGAGGACTGTaGAGGGAGGAGGGAGGTGGGAGGAGGAAGGCGGGA +
Preference number: 6 (lower is better)
Translates to: PDSVCGSEAGGL*REEGGGRRKAG
Trigger: TCCCGCCTTCCTCCTCCCACCTCCCTCCTCCCTCCACAGTCCTCCAGCTTCGGATCCACAGACGGAATCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
CDS GCA 72 bp GGTATCCGCGGCACGTGGAAGAGGTGGCCTGTGAGATaGTGCGCTGGGCTTGACCGTCAGCTCCTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: GIRGTWKRWPVR*CAGLDRQLLQF
Trigger: AAACTGGAGGAGCTGACGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGATACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS TCA 72 bp AGATCCACGGGTCCGGATCCGAGACTGGAGAGACGGTaGAGGACCCTGAGAGGCTCTGCTCCTGATTCCGTC +
Preference number: 6 (lower is better)
Translates to: RSTGPDPRLERR*RTLRGSAPDSV
Trigger: GACGGAATCAGGAGCAGAGCCTCTCAGGGTCCTTCACCGTCTCTCCAGTCTCGGATCCGGACCCGTGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595591.1
CDS GCA 72 bp ATCCGCGGCACGTGGAAGAGGTGGCCTGTGAGATGCTaGGCTGGGCTTGACCGTCAGCTCCTCCAGTTTAAG +
Preference number: 6 (lower is better)
Translates to: IRGTWKRWPVRC*AGLDRQLLQFK
Trigger: CTTAAACTGGAGGAGCTGACGGTCAAGCCCAGCGCAGCATCTCACAGGCCACCTCTTCCACGTGCCGCGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594582.1
CDS CCA 72 bp CTGGATCCCTGTCTCGGCTCTGGGGGCATGTACTGGTaGTATGTCAAGTTCCCCCTGGGCTTGGACTCCCTC +
Preference number: 6 (lower is better)
Translates to: LDPCLGSGGMYW*YVKFPLGLDSL
Trigger: GAGGGAGTCCAAGCCCAGGGGGAACTTGACATACCACCAGTACATGCCCCCAGAGCCGAGACAGGGATCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
ENST00000599703.1
CDS CCA 72 bp GGGCAGGCCAGGGAGCAAGACTTGATTGCTGGGAGATaGGCGCCTGAACTGGATTCTGCTCCTGATTCCGTC +
Preference number: 6 (lower is better)
Translates to: GQAREQDLIAGR*APELDSAPDSV
Trigger: GACGGAATCAGGAGCAGAATCCAGTTCAGGCGCCCATCTCCCAGCAATCAAGTCTTGCTCCCTGGCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356751.8
ENST00000594582.1
ENST00000599703.1
CDS TCA 72 bp TCCGAAGCTGGAGGACAGATCGGAACTTGGAGCGAATaGTTTGGGAACGCTGGGAGGAAGCCGCCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: SEAGGQIGTWSE*FGNAGRKPPGS
Trigger: TGACCCTGGCGGCTTCCTCCCAGCGTTCCCAAATCATTCGCTCCAAGTTCCGATCTGTCCTCCAGCTTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000599703.1
CDS TCA 72 bp GCTGAGATCCACGGGTCCGGATCCGAGATCTGCTCCTaGTTCCGTCTGTGGATCCGAAGCTGGAGGACAGAT +
Preference number: 6 (lower is better)
Translates to: AEIHGSGSEICS*FRLWIRSWRTD
Trigger: ATCTGTCCTCCAGCTTCGGATCCACAGACGGAATCAGGAGCAGATCTCGGATCCGGACCCGTGGATCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318083.11
CDS CCA 72 bp AGCTGGAGGACAGATCGGAACTTGGAGCGAATGATTTaGGAACGCTGGGAGGAAGCCGCCAGGGTCATTGCC +
Preference number: 6 (lower is better)
Translates to: SWRTDRNLERMI*ERWEEAARVIA
Trigger: GGCAATGACCCTGGCGGCTTCCTCCCAGCGTTCCCAAATCATTCGCTCCAAGTTCCGATCTGTCCTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000599703.1
CDS CCA 72 bp GTCAAGTTCCCCCTGGGCTTGGACTCCCTCCAACGTTaGGAGATCTTGGGAGACTCCTTCTTTGGGGACCTC +
Preference number: 6 (lower is better)
Translates to: VKFPLGLDSLQR*EILGDSFFGDL
Trigger: GAGGTCCCCAAAGAAGGAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
ENST00000599703.1
CDS CCA 72 bp CTGGGGGCATGTACTGGTGGTATGTCAAGTTCCCCCTaGGCTTGGACTCCCTCCAACGTTGGGAGATCTTGG +
Preference number: 6 (lower is better)
Translates to: LGACTGGMSSSP*AWTPSNVGRSW
Trigger: CCAAGATCTCCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACATACCACCAGTACATGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
ENST00000599703.1
CDS CAA 90 bp GGCTCTGGGGGCATGTACTGGTGGTATGTCAAGTTCCCCCTGGGCTaGGACTCCCTCCAACGTTGGGAGATCTTGGGAGACTCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: GSGGMYWWYVKFPLG*DSLQRWEILGDSFF
Trigger: AAAGAAGGAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACATACCACCAGTACATGCCCCCAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
ENST00000599703.1
CDS CAA 72 bp AAGCTGGAGGACAGATCGGAACTTGGAGCGAATGATTaGGGAACGCTGGGAGGAAGCCGCCAGGGTCATTGC +
Preference number: 6 (lower is better)
Translates to: KLEDRSELGAND*GTLGGSRQGHC
Trigger: GCAATGACCCTGGCGGCTTCCTCCCAGCGTTCCCAAATCATTCGCTCCAAGTTCCGATCTGTCCTCCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000599703.1
CDS CAA 72 bp CGTCTGTGGATCCGAAGCTGGAGGACAGATCGGAACTaGGAGCGAATGATTTGGGAACGCTGGGAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: RLWIRSWRTDRN*ERMIWERWEEA
Trigger: GGCTTCCTCCCAGCGTTCCCAAATCATTCGCTCCAAGTTCCGATCTGTCCTCCAGCTTCGGATCCACAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318083.11
ENST00000599703.1
CDS CAA 72 bp TGTCAAGTTCCCCCTGGGCTTGGACTCCCTCCAACGTaGGGAGATCTTGGGAGACTCCTTCTTTGGGGACCT +
Preference number: 6 (lower is better)
Translates to: CQVPPGLGLPPT*GDLGRLLLWGP
Trigger: AGGTCCCCAAAGAAGGAGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
ENST00000599703.1
CDS CAA 72 bp GGCATGTACTGGTGGTATGTCAAGTTCCCCCTGGGCTaGGACTCCCTCCAACGTTGGGAGATCTTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: GMYWWYVKFPLG*DSLQRWEILGD
Trigger: GTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACATACCACCAGTACATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
ENST00000599703.1
CDS CCA 72 bp GCATGTACTGGTGGTATGTCAAGTTCCCCCTGGGCTTaGACTCCCTCCAACGTTGGGAGATCTTGGGAGACT +
Preference number: 6 (lower is better)
Translates to: ACTGGMSSSPWA*TPSNVGRSWET
Trigger: AGTCTCCCAAGATCTCCCAACGTTGGAGGGAGTCCAAGCCCAGGGGGAACTTGACATACCACCAGTACATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318083.11
ENST00000356751.8
ENST00000594582.1
ENST00000595591.1
ENST00000599703.1