RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAMLD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000013619

Ensembl transcript IDs: ENST00000262858.7, ENST00000262858.8, ENST00000358892.7, ENST00000370401.6, ENST00000370401.7, ENST00000426613.4, ENST00000426613.5, ENST00000432680.7, ENST00000464149.1, ENST00000468306.1, ENST00000682016.1, ENST00000682253.1, ENST00000683453.1, ENST00000683696.1

Found 640 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGCTACAGGCACCGGGCCCTGTACCGGGCTCTGCCTGAGGCTCTaGCTGCCCAGCAGGCTGAAGCTGGGGTTGTTGGCCAGGGGCACT +
Preference number: 1 (lower is better)
Translates to: FATGTGPCTGLCLRL*LPSRLKLGLLARGT
Trigger: AGTGCCCCTGGCCAACAACCCCAGCTTCAGCCTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTAGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 90 bp AACTTGGTGGTGTTTGCTACAGGCACCGGGCCCTGTACCGGGCTCTaGCTGAGGCTCTGGCTGCCCAGCAGGCTGAAGCTGGGGTTGTTG +
Preference number: 1 (lower is better)
Translates to: NLVVFATGTGPCTGL*LRLWLPSRLKLGLL
Trigger: CAACAACCCCAGCTTCAGCCTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTAGCAAACACCACCAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp GACCTGGGAACTGGCTGGCAGCAACGGCAGAAGCAGCAGCAGCGGTaGCAGCAGCAGCCACATAGCTTGGTGGCTCGATGCCCTGTATGG +
Preference number: 1 (lower is better)
Translates to: DLGTGWQQRQKQQQR*QQQPHSLVARCPVW
Trigger: CCATACAGGGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCTGCCGTTGCTGCCAGCCAGTTCCCAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp GCTCAGGGGGAATATCCGTTCTGTCGAACGGACCTGGGAACTGGCTaGCAGCAACGGCAGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: AQGEYPFCRTDLGTG*QQRQKQQQRWQQQP
Trigger: TGGCTGCTGCTGCCACCGCTGCTGCTGCTTCTGCCGTTGCTGCCAGCCAGTTCCCAGGTCCGTTCGACAGAACGGATATTCCCCCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp GGCAGCTCAGGGGGAATATCCGTTCTGTCGAACGGACCTGGGAACTaGCTGGCAGCAACGGCAGAAGCAGCAGCAGCGGTGGCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: GSSGGISVLSNGPGN*LAATAEAAAAVAAA
Trigger: TGCTGCTGCCACCGCTGCTGCTGCTTCTGCCGTTGCTGCCAGCCAGTTCCCAGGTCCGTTCGACAGAACGGATATTCCCCCTGAGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 90 bp GTTGTTGGCCAGGGGCACTTGTGTTCCCATCGCAGCGGGCACTTGTaGCTCCCAATCAGATGGCCTCTGAAGGCAGGCCTGGCCAGAAGG +
Preference number: 1 (lower is better)
Translates to: VVGQGHLCSHRSGHL*LPIRWPLKAGLARR
Trigger: CCTTCTGGCCAGGCCTGCCTTCAGAGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAAGTGCCCCTGGCCAACAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 90 bp GGGACTAAAGCTGGCCATACCCTGCTGGAGGAACTTGGTGGTGTTTaGTACAGGCACCGGGCCCTGTACCGGGCTCTGCCTGAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: GTKAGHTLLEELGGV*YRHRALYRALPEAL
Trigger: CAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTTTAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp GGCAGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTGGTaGCTCGATGCCCTGTATGGGGCTCAGGGGACTAAAGCTGGCCAT +
Preference number: 1 (lower is better)
Translates to: GRSSSSGGSSSHIAW*LDALYGAQGTKAGH
Trigger: ATGGCCAGCTTTAGTCCCCTGAGCCCCATACAGGGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp AACGGCAGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTaGTGGCTCGATGCCCTGTATGGGGCTCAGGGGACTAAAGCTGGC +
Preference number: 1 (lower is better)
Translates to: NGRSSSSGGSSSHIA*WLDALYGAQGTKAG
Trigger: GCCAGCTTTAGTCCCCTGAGCCCCATACAGGGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCTGCCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 90 bp TCGATGCCCTGTATGGGGCTCAGGGGACTAAAGCTGGCCATACCCTaGTGGAGGAACTTGGTGGTGTTTGCTACAGGCACCGGGCCCTGT +
Preference number: 1 (lower is better)
Translates to: SMPCMGLRGLKLAIP*WRNLVVFATGTGPC
Trigger: ACAGGGCCCGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTTTAGTCCCCTGAGCCCCATACAGGGCATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp TTGTTGAACGCAGTGGGCATTCTTGGCACACTAGGCCGTCTGAGCTaGTGGGGACTCAAGGACTGGGTGCCCAGGGAGCTGGGACAGAAC +
Preference number: 1 (lower is better)
Translates to: LLNAVGILGTLGRLS*WGLKDWVPRELGQN
Trigger: GTTCTGTCCCAGCTCCCTGGGCACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp ATGCCCTGTATGGGGCTCAGGGGACTAAAGCTGGCCATACCCTGCTaGAGGAACTTGGTGGTGTTTGCTACAGGCACCGGGCCCTGTACC +
Preference number: 1 (lower is better)
Translates to: MPCMGLRGLKLAIPC*RNLVVFATGTGPCT
Trigger: GGTACAGGGCCCGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTTTAGTCCCCTGAGCCCCATACAGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp TGCCGCTGTGACCCATGCAGCATTGTTGAACGCAGTGGGCATTCTTaGCACACTAGGCCGTCTGAGCTGGTGGGGACTCAAGGACTGGGT +
Preference number: 1 (lower is better)
Translates to: CRCDPCSIVERSGHS*HTRPSELVGTQGLG
Trigger: ACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 90 bp TTTCCCCGAAACTGCTGTGGTCACAGCTGCTGCCGCTGTGACCCATaGAGCATTGTTGAACGCAGTGGGCATTCTTGGCACACTAGGCCG +
Preference number: 1 (lower is better)
Translates to: FPRNCCGHSCCRCDP*SIVERSGHSWHTRP
Trigger: CGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCAGCAGCTGTGACCACAGCAGTTTCGGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR TCA 90 bp GAGTTGGTGAGATCACTCCCATGCCCTCGCAGCTCTGGTGCCTGGTaGGTGGGATCATTCCTGGACTCAGATTGTTCTGAAGAAGCCCAG +
Preference number: 1 (lower is better)
Translates to: ELVRSLPCPRSSGAW*VGSFLDSDCSEEAQ
Trigger: CTGGGCTTCTTCAGAACAATCTGAGTCCAGGAATGATCCCACTCACCAGGCACCAGAGCTGCGAGGGCATGGGAGTGATCTCACCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR TCA 90 bp TGCCTCCCAATCAGATGGCCTCTGAAGGCAGGCCTGGCCAGAAGGTaGGTGCTGCTGAACGCTATTATCCACTTGGCTGAGGGGTGTTTT +
Preference number: 1 (lower is better)
Translates to: CLPIRWPLKAGLARR*VLLNAIIHLAEGCF
Trigger: AAAACACCCCTCAGCCAAGTGGATAATAGCGTTCAGCAGCACTCACCTTCTGGCCAGGCCTGCCTTCAGAGGCCATCTGATTGGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp TCCCATGCCCTCGCAGCTCTGGTGCCTGGTGAGTGGGATCATTCCTaGACTCAGATTGTTCTGAAGAAGCCCAGTTCTGGGTGGCATCAA +
Preference number: 1 (lower is better)
Translates to: SHALAALVPGEWDHS*TQIVLKKPSSGWHQ
Trigger: TTGATGCCACCCAGAACTGGGCTTCTTCAGAACAATCTGAGTCCAGGAATGATCCCACTCACCAGGCACCAGAGCTGCGAGGGCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 90 bp ATGTCACCATGGGGGTTTCTATGGGCATCCTGCTCAGATTTAAAGTaGCCCAGCATCCTGGGTGACTTGCCCAGAATTCTGGGCTGTGGC +
Preference number: 1 (lower is better)
Translates to: MSPWGFLWASCSDLK*PSILGDLPRILGCG
Trigger: GCCACAGCCCAGAATTCTGGGCAAGTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCAGGATGCCCATAGAAACCCCCATGGTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp GTTCTGAAGAAGCCCAGTTCTGGGTGGCATCAAGTGCTTGCTAGATaGGGGGCTTGCCTTGATCCGGCTACACTTGGAGGTGACTTGTTC +
Preference number: 1 (lower is better)
Translates to: VLKKPSSGWHQVLAR*GACLDPATLGGDLF
Trigger: GAACAAGTCACCTCCAAGTGTAGCCGGATCAAGGCAAGCCCCCCATCTAGCAAGCACTTGATGCCACCCAGAACTGGGCTTCTTCAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 90 bp CCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGGCATCCTaGTCAGATTTAAAGTGCCCCAGCATCCTGGGTGACTTGCCCAGA +
Preference number: 1 (lower is better)
Translates to: PLPRVMSPWGFLWAS*SDLKCPSILGDLPR
Trigger: TCTGGGCAAGTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCAGGATGCCCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp GGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATaGGCATCCTGCTCAGATTTAAAGTGCCCCAGCATCCTGGGTGAC +
Preference number: 1 (lower is better)
Translates to: GSTPLPRVMSPWGFL*ASCSDLKCPSILGD
Trigger: GTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCAGGATGCCCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp AAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTaGGCTTTTTCTCTCGGTCTGAATGGTAAAGGGAGGAGGATACTC +
Preference number: 1 (lower is better)
Translates to: KPGTARLNPTRVHTS*AFSLGLNGKGRRIL
Trigger: GAGTATCCTCCTCCCTTTACCATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR TCA 90 bp TCTATGGGCATCCTGCTCAGATTTAAAGTGCCCCAGCATCCTGGGTaGCTTGCCCAGAATTCTGGGCTGTGGCATTTTGAGCAGCAGCAT +
Preference number: 1 (lower is better)
Translates to: SMGILLRFKVPQHPG*LAQNSGLWHFEQQH
Trigger: ATGCTGCTGCTCAAAATGCCACAGCCCAGAATTCTGGGCAAGTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCAGGATGCCCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 90 bp GAGCAGCAGCATGCTGTTCCAAAATGTCGTCGATCAGCCTCAAGTTaGACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTTTCAAGA +
Preference number: 1 (lower is better)
Translates to: EQQHAVPKCRRSASS*TPSLHLGSHRSLSR
Trigger: TCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGACGACATTTTGGAACAGCATGCTGCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp AACTGCGGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATaGGGGTTTCTATGGGCATCCTGCTCAGATTTAAAGTGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: NCGYGSTPLPRVMSP*GFLWASCSDLKCPS
Trigger: GCTGGGGCACTTTAAATCTGAGCAGGATGCCCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCCGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 90 bp CAAAATGTCGTCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTaGGCTCACACAGGAGCCTTTCAAGAGAGCTTCAATGAAATCTAC +
Preference number: 1 (lower is better)
Translates to: QNVVDQPQVAHPVFI*AHTGAFQESFNEIY
Trigger: GTAGATTTCATTGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGACGACATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR TCA 90 bp AGTCTTCATCTGGGCTCACACAGGAGCCTTTCAAGAGAGCTTCAATaGAATCTACCTCATTGCAGTCAGGTGACGAAATCAGATCATTTA +
Preference number: 1 (lower is better)
Translates to: SLHLGSHRSLSRELQ*NLPHCSQVTKSDHL
Trigger: TAAATGATCTGATTTCGTCACCTGACTGCAATGAGGTAGATTTCATTGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TACAGGCACCGGGCCCTGTACCGGGCTCTGCCTGAGGCTCTGGCTGCCCAGCAGGACTCAAGGACTGGGTaGCCAGGGAGCTGGGACAGA +
Preference number: 2 (lower is better)
Translates to: YRHRALYRALPEALAAQQDSRTG*PGSWDR
Trigger: TCTGTCCCAGCTCCCTGGGCACCCAGTCCTTGAGTC...CTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TACAGGCACCGGGCCCTGTACCGGGCTCTGCCTGAGGCTCTGGCTGCCCAGCAGTGCTGTGGTCACAGCTaGTGCCGCTGTGACCCATGC +
Preference number: 2 (lower is better)
Translates to: YRHRALYRALPEALAAQQCCGHS*CRCDPC
Trigger: GCATGGGTCACAGCGGCAGCAGCTGTGACCACAGCA...CTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TACAGGCACCGGGCCCTGTACCGGGCTCTGCCTGAGGCTCTGGCTGCCCAGCAGCTAGGCCGTCTGAGCTaGTGGGGACTCAAGGACTGG +
Preference number: 2 (lower is better)
Translates to: YRHRALYRALPEALAAQQLGRLS*WGLKDW
Trigger: CCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAG...CTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TACAGGCACCGGGCCCTGTACCGGGCTCTGCCTGAGGCTCTGGCTGCCCAGCAGTCCCCGAAACTGCTGTaGTCACAGCTGCTGCCGCTG +
Preference number: 2 (lower is better)
Translates to: YRHRALYRALPEALAAQQSPKLL*SQLLPL
Trigger: CAGCGGCAGCAGCTGTGACCACAGCAGTTTCGGGGA...CTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 90 bp GGGCTCTGCCTGAGGCTCTGGCTGCCCAGCAGGCTGAAGCTGGGGTaGTTGGCCAGGGGCACTTGTGTTCCCATCGCAGCGGGCACTTGT +
Preference number: 2 (lower is better)
Translates to: GLCLRLWLPSRLKLG*LARGTCVPIAAGTC
Trigger: ACAAGTGCCCGCTGCGATGGGAACACAAGTGCCCCTGGCCAACAACCCCAGCTTCAGCCTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 90 bp GGGGTTGTTGGCCAGGGGCACTTGTGTTCCCATCGCAGCGGGCACTaGTGCCTCCCAATCAGATGGCCTCTGAAGGCAGGCCTGGCCAGA +
Preference number: 2 (lower is better)
Translates to: GVVGQGHLCSHRSGH*CLPIRWPLKAGLAR
Trigger: TCTGGCCAGGCCTGCCTTCAGAGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAAGTGCCCCTGGCCAACAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 90 bp CTGGCTGCCCAGCAGGCTGAAGCTGGGGTTGTTGGCCAGGGGCACTaGTGTTCCCATCGCAGCGGGCACTTGTGCCTCCCAATCAGATGG +
Preference number: 2 (lower is better)
Translates to: LAAQQAEAGVVGQGH*CSHRSGHLCLPIRW
Trigger: CCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAAGTGCCCCTGGCCAACAACCCCAGCTTCAGCCTGCTGGGCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TACAGGCACCGGGCCCTGTACCGGGCTCTGCCTGAGGCTCTGGCTGCCCAGCAGGAAGAAGCCCAGTTCTaGGTGGCATCAAGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: YRHRALYRALPEALAAQQEEAQF*VASSAC
Trigger: GCAAGCACTTGATGCCACCCAGAACTGGGCTTCTTC...CTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 90 bp ATGGGGCTCAGGGGACTAAAGCTGGCCATACCCTGCTGGAGGAACTaGGTGGTGTTTGCTACAGGCACCGGGCCCTGTACCGGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: MGLRGLKLAIPCWRN*VVFATGTGPCTGLC
Trigger: GCAGAGCCCGGTACAGGGCCCGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTTTAGTCCCCTGAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp AGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTGGTGGCTCGATGCCTGTGGTCACAGCTGCTaGCGCTGTGACCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: RSSSSGGSSSHIAWWLDACGHSC*RCDPCS
Trigger: GCTGCATGGGTCACAGCGGCAGCAGCTGTGACCACA...GGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCATGCCCTCGCAGCTCTaGTGCCTGGTGAGTGGGATC +
Preference number: 2 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSMPSQL*CLVSGI
Trigger: GATCCCACTCACCAGGCACCAGAGCTGCGAGGGCAT...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CCCAGCAGGCTGAAGCTGGGGTTGTTGGCCAGGGGCACTTGTGTTCCCATCGCACTGAGTGTGAGAGGATaGGACACTGGGGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PSRLKLGLLARGTCVPIALSVRG*DTGGWR
Trigger: CCTCCAGCCCCCAGTGTCCCATCCTCTCACACTCAG...TGCGATGGGAACACAAGTGCCCCTGGCCAACAACCCCAGCTTCAGCCTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GGGGAATATCCGTTCTGTCGAACGGACCTGGGAACTGGCTGGCAGCAACGGCAGCAGGGGCACTTCTGGTaGGGTGGCCTTGGGACTCTG +
Preference number: 2 (lower is better)
Translates to: GEYPFCRTDLGTGWQQRQQGHFW*GGLGTL
Trigger: CAGAGTCCCAAGGCCACCCCACCAGAAGTGCCCCTG...CTGCCGTTGCTGCCAGCCAGTTCCCAGGTCCGTTCGACAGAACGGATATTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp ATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGACTCAAGGACTGGGTGCCCCAGGGGCACTTCTGGTaGGGTGGCCTTGGGACTCTG +
Preference number: 2 (lower is better)
Translates to: ILGTLGRLSWWGLKDWVPQGHFW*GGLGTL
Trigger: CAGAGTCCCAAGGCCACCCCACCAGAAGTGCCCCTG...GGGCACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TACAGGCACCGGGCCCTGTACCGGGCTCTGCCTGAGGCTCTGGCTGCCCAGCAGACGCTATTATCCACTTaGCTGAGGGGTGTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: YRHRALYRALPEALAAQQTLLST*LRGVFP
Trigger: GGGGAAAACACCCCTCAGCCAAGTGGATAATAGCGT...CTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp AGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTGGTGGCTCGATGCCGGCCTGGCCAGAAGGTaGGTGCTGCTGAACGCTATT +
Preference number: 2 (lower is better)
Translates to: RSSSSGGSSSHIAWWLDAGLARR*VLLNAI
Trigger: AATAGCGTTCAGCAGCACTCACCTTCTGGCCAGGCC...GGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TACAGGCACCGGGCCCTGTACCGGGCTCTGCCTGAGGCTCTGGCTGCCCAGCAGTTGGGACTCTGCATATaGTGGCAGACAGAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: YRHRALYRALPEALAAQQLGLCI*WQTESS
Trigger: ACTTGACTCTGTCTGCCAGCATATGCAGAGTCCCAA...CTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp ATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGACTCAAGGACTGGGTGCCCCTGGTGGGGTGGCCTTaGGACTCTGCATATGCTGGC +
Preference number: 2 (lower is better)
Translates to: ILGTLGRLSWWGLKDWVPLVGWP*DSAYAG
Trigger: GCCAGCATATGCAGAGTCCCAAGGCCACCCCACCAG...GGGCACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GAACGCAGTGGGCATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGACTCAACAGGGGCACTTCTGGTaGGGTGGCCTTGGGACTCTG +
Preference number: 2 (lower is better)
Translates to: ERSGHSWHTRPSELVGTQQGHFW*GGLGTL
Trigger: CAGAGTCCCAAGGCCACCCCACCAGAAGTGCCCCTG...TTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGGGTGCCCAGGGAGCTaGGACAGAACCCAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNGCPGS*DRTQAG
Trigger: CCCTGCCTGGGTTCTGTCCCAGCTCCCTGGGCACCC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TGCCGCTGTGACCCATGCAGCATTGTTGAACGCAGTGGGCATTCTTGGCACACTGGGTGCCCAGGGAGCTaGGACAGAACCCAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: CRCDPCSIVERSGHSWHTGCPGS*DRTQAG
Trigger: CCCTGCCTGGGTTCTGTCCCAGCTCCCTGGGCACCC...AGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTGGGTGCCCAGGGAGCTaGGACAGAACCCAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: SISLKLHTQSSSGLTQEPGCPGS*DRTQAG
Trigger: CCCTGCCTGGGTTCTGTCCCAGCTCCCTGGGCACCC...AGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGTGGGGACTCAAGGACTaGGTGCCCAGGGAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWWGLKD*VPRELG
Trigger: TCCCAGCTCCCTGGGCACCCAGTCCTTGAGTCCCCA...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp ATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGACTCAAGGACTGGGTGCCCCTTCCCCAGAGTTGGTaGGATCACTCCCATGCCCTC +
Preference number: 2 (lower is better)
Translates to: ILGTLGRLSWWGLKDWVPLPQSW*DHSHAL
Trigger: GAGGGCATGGGAGTGATCTCACCAACTCTGGGGAAG...GGGCACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCAATCAGATGGCCTCTaGAGGCAGGCCTGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLQSDGL*RQAWPE
Trigger: TTCTGGCCAGGCCTGCCTTCAGAGGCCATCTGATTG...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp AGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTGGTGGCTCGATGCCGTGGCCTTGGGACTCTaGATATGCTGGCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: RSSSSGGSSSHIAWWLDAVALGL*ICWQTE
Trigger: CTCTGTCTGCCAGCATATGCAGAGTCCCAAGGCCAC...GGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGCTGAGTGTGAGAGGATaGGACACTGGGGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWLSVRG*DTGGWR
Trigger: CCTCCAGCCCCCAGTGTCCCATCCTCTCACACTCAG...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 90 bp ACTGCTGTGGTCACAGCTGCTGCCGCTGTGACCCATGCAGCATTGTaGAACGCAGTGGGCATTCTTGGCACACTAGGCCGTCTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: TAVVTAAAAVTHAAL*NAVGILGTLGRLSW
Trigger: CCAGCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCAGCAGCTGTGACCACAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp AGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTGGTGGCTCGATGCCGGCTACACTTGGAGGTaGCTTGTTCTTGGACGGCTT +
Preference number: 2 (lower is better)
Translates to: RSSSSGGSSSHIAWWLDAGYTWR*LVLGRL
Trigger: AAGCCGTCCAAGAACAAGTCACCTCCAAGTGTAGCC...GGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp AGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTGGTGGCTCGATGCCCCCATGCAGCATTGTTaGACGCAGTGGGCATTCTTG +
Preference number: 2 (lower is better)
Translates to: RSSSSGGSSSHIAWWLDAPMQHC*TQWAFL
Trigger: CAAGAATGCCCACTGCGTTCAACAATGCTGCATGGG...GGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp ATTGTTGAACGCAGTGGGCATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGGTGAGATCACTCCCATaGCCTCGCAGCTCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: IVERSGHSWHTRPSELVGVRSLP*PRSSGA
Trigger: GGCACCAGAGCTGCGAGGGCATGGGAGTGATCTCAC...CCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGCCCTGTACCGGGCTCTaGCTGAGGCTCTGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWPCTGL*LRLWLP
Trigger: GGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGG...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTTTCAAGAGAGCTTCACCCTGTACCGGGCTCTaGCTGAGGCTCTGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LHTQSSSGLTQEPFKRASPCTGL*LRLWLP
Trigger: GGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGG...TGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp AGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTGGTGGCTCGATGCCGAAGAAGCCCAGTTCTaGGTGGCATCAAGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: RSSSSGGSSSHIAWWLDAEEAQF*VASSAC
Trigger: GCAAGCACTTGATGCCACCCAGAACTGGGCTTCTTC...GGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 90 bp GAAACTGCTGTGGTCACAGCTGCTGCCGCTGTGACCCATGCAGCATaGTTGAACGCAGTGGGCATTCTTGGCACACTAGGCCGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: ETAVVTAAAAVTHAA*LNAVGILGTLGRLS
Trigger: GCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCAGCAGCTGTGACCACAGCAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp ATTGTTGAACGCAGTGGGCATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGAGCTCTGGTGCCTGGTaGGTGGGATCATTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: IVERSGHSWHTRPSELVGSSGAW*VGSFLD
Trigger: GTCCAGGAATGATCCCACTCACCAGGCACCAGAGCT...CCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp GGGGAATATCCGTTCTGTCGAACGGACCTGGGAACTGGCTGGCAGCAACGGCAGCCCATGCAGCATTGTTaGACGCAGTGGGCATTCTTG +
Preference number: 2 (lower is better)
Translates to: GEYPFCRTDLGTGWQQRQPMQHC*TQWAFL
Trigger: CAAGAATGCCCACTGCGTTCAACAATGCTGCATGGG...CTGCCGTTGCTGCCAGCCAGTTCCCAGGTCCGTTCGACAGAACGGATATTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGTGAGATCACTCCCATaGCCTCGCAGCTCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNVRSLP*PRSSGA
Trigger: GGCACCAGAGCTGCGAGGGCATGGGAGTGATCTCAC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp AGAAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTGGTGGCTCGATGCCGAGGTGAAAATTCCTTaGCGCTTCCCCAGAGTTGGT +
Preference number: 2 (lower is better)
Translates to: RSSSSGGSSSHIAWWLDAEVKIP*RFPRVG
Trigger: ACCAACTCTGGGGAAGCGGCAAGGAATTTTCACCTC...GGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATTGTGGTCACAGCTGCTaGCGCTGTGACCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNCGHSC*RCDPCS
Trigger: GCTGCATGGGTCACAGCGGCAGCAGCTGTGACCACA...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp GGGGAATATCCGTTCTGTCGAACGGACCTGGGAACTGGCTGGCAGCAACGGCAGTGTTTTCCCCGAAACTaGTGTGGTCACAGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: GEYPFCRTDLGTGWQQRQCFPRN*CGHSCC
Trigger: GCAGCAGCTGTGACCACAGCAGTTTCGGGGAAAACA...CTGCCGTTGCTGCCAGCCAGTTCCCAGGTCCGTTCGACAGAACGGATATTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGCTGGTGGGGTGGCCTTaGGACTCTGCATATGCTGGC +
Preference number: 2 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWLVGWP*DSAYAG
Trigger: GCCAGCATATGCAGAGTCCCAAGGCCACCCCACCAG...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp TGCCGCTGTGACCCATGCAGCATTGTTGAACGCAGTGGGCATTCTTGGCACACTAGCTCTGGTGCCTGGTaGGTGGGATCATTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: CRCDPCSIVERSGHSWHTSSGAW*VGSFLD
Trigger: GTCCAGGAATGATCCCACTCACCAGGCACCAGAGCT...AGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp TCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTCTTCCCCAGAGTTGGTaGGATCACTCCCATGCCCTC +
Preference number: 2 (lower is better)
Translates to: SISLKLHTQSSSGLTQEPLPQSW*DHSHAL
Trigger: GAGGGCATGGGAGTGATCTCACCAACTCTGGGGAAG...AGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGGCATCCTGGGTGACTTaGCCAGAATTCTGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGASWVT*PEFWAV
Trigger: CACAGCCCAGAATTCTGGGCAAGTCACCCAGGATGC...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGGTAACGGGAGACAACTaGGGGTATGGATCGACACCA +
Preference number: 2 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWVTGDN*GYGSTP
Trigger: TGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTAC...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR-3UTR CCA 90 bp TTGTGTTCCCATCGCAGCGGGCACTTGTGCCTCCCAATCAGATGGCCTCTGAAGCAAGTGCTTGCTAGATaGGGGGCTTGCCTTGATCCG +
Preference number: 2 (lower is better)
Translates to: LCSHRSGHLCLPIRWPLKQVLAR*GACLDP
Trigger: CGGATCAAGGCAAGCCCCCCATCTAGCAAGCACTTG...CTTCAGAGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTAAGCTGGCCATACCCTaGTGGAGGAACTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: SISLKLHTQSSSGLTQEPKLAIP*WRNLVV
Trigger: CACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTT...AGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCGAGTGGGATCATTCCTaGACTCAGATTGTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSEWDHS*TQIVLK
Trigger: CTTCAGAACAATCTGAGTCCAGGAATGATCCCACTC...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGGAGAGGATGGGACACTaGGGGCTGGAGGTGAAAATT +
Preference number: 2 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGERMGH*GLEVKI
Trigger: AATTTTCACCTCCAGCCCCCAGTGTCCCATCCTCTC...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGGGACTCTGCATATGCTaGCAGACAGAGTCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWGLCIC*QTESSL
Trigger: CAGACTTGACTCTGTCTGCCAGCATATGCAGAGTCC...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGCACTTCTGGTGGGGTaGCCTTGGGACTCTGCATAT +
Preference number: 2 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNALLVG*PWDSAY
Trigger: ATATGCAGAGTCCCAAGGCCACCCCACCAGAAGTGC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTGCACTTCTGGTGGGGTaGCCTTGGGACTCTGCATAT +
Preference number: 2 (lower is better)
Translates to: SISLKLHTQSSSGLTQEPALLVG*PWDSAY
Trigger: ATATGCAGAGTCCCAAGGCCACCCCACCAGAAGTGC...AGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTGCACTTCTGGTGGGGTaGCCTTGGGACTCTGCATAT +
Preference number: 2 (lower is better)
Translates to: FKPGTARLNPTRVHTSWAALLVG*PWDSAY
Trigger: ATATGCAGAGTCCCAAGGCCACCCCACCAGAAGTGC...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGCACTTAACGATAAAAGGCAGGGGCACTTCTaGTGGGGTGGCCTTGGGACT +
Preference number: 2 (lower is better)
Translates to: ENSPSLLVKCLCGALNDKRQGHF*WGGLGT
Trigger: AGTCCCAAGGCCACCCCACCAGAAGTGCCCCTGCCT...TTTATCGTTAAGTGCCCCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 90 bp TGGGCATCCTGCTCAGATTTAAAGTGCCCCAGCATCCTGGGTGACTaGCCCAGAATTCTGGGCTGTGGCATTTTGAGCAGCAGCATGCTG +
Preference number: 2 (lower is better)
Translates to: WASCSDLKCPSILGD*PRILGCGILSSSML
Trigger: CAGCATGCTGCTGCTCAAAATGCCACAGCCCAGAATTCTGGGCAAGTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCAGGATGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp GAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGCACTTAACGATAAAGTGAGATCACTCCCATaGCCTCGCAGCTCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: ENSPSLLVKCLCGALNDKVRSLP*PRSSGA
Trigger: GGCACCAGAGCTGCGAGGGCATGGGAGTGATCTCAC...TTTATCGTTAAGTGCCCCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp GAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGCACTTAACGATAAACGCAGCGGGCACTTGTaGCTCCCAATCAGATGGCCT +
Preference number: 2 (lower is better)
Translates to: ENSPSLLVKCLCGALNDKRSGHL*LPIRWP
Trigger: AGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCG...TTTATCGTTAAGTGCCCCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGAAGCCCAGTTCTGGGTaGCATCAAGTGCTTGCTAGA +
Preference number: 2 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGKPSSG*HQVLAR
Trigger: TCTAGCAAGCACTTGATGCCACCCAGAACTGGGCTT...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CACCCAGTCTTCATCTGGGCTCACACAGGAGCCTTTCAAGAGAGCTTCAATGAACTGCCCAGGGGAGTCTaGCCTGAGTGTGAGAGGATG +
Preference number: 2 (lower is better)
Translates to: HPVFIWAHTGAFQESFNELPRGV*PECERM
Trigger: CATCCTCTCACACTCAGGCCAGACTCCCCTGGGCAG...TTCATTGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTGTGTTCCCATCGCAGCGGGCACTTGTGCCTCCCAATCAGATGGCCTCTGAAGGGACTCTGCATATGCTaGCAGACAGAGTCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: LCSHRSGHLCLPIRWPLKGLCIC*QTESSL
Trigger: CAGACTTGACTCTGTCTGCCAGCATATGCAGAGTCC...CTTCAGAGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTCCTGCTGGAGGAACTTaGTGGTGTTTGCTACAGGCA +
Preference number: 2 (lower is better)
Translates to: FKPGTARLNPTRVHTSWAPAGGT*WCLLQA
Trigger: TGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGG...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 90 bp CCCAGCATCCTGGGTGACTTGCCCAGAATTCTGGGCTGTGGCATTTaGAGCAGCAGCATGCTGTTCCAAAATGTCGTCGATCAGCCTCAA +
Preference number: 2 (lower is better)
Translates to: PSILGDLPRILGCGI*SSSMLFQNVVDQPQ
Trigger: TTGAGGCTGATCGACGACATTTTGGAACAGCATGCTGCTGCTCAAAATGCCACAGCCCAGAATTCTGGGCAAGTCACCCAGGATGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGACTCAGATTGTTCTaGAGAAGCCCAGTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWGLRLF*RSPVLG
Trigger: ACCCAGAACTGGGCTTCTTCAGAACAATCTGAGTCC...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp TGCCGCTGTGACCCATGCAGCATTGTTGAACGCAGTGGGCATTCTTGGCACACTGGACTCAGATTGTTCTaGAGAAGCCCAGTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: CRCDPCSIVERSGHSWHTGLRLF*RSPVLG
Trigger: ACCCAGAACTGGGCTTCTTCAGAACAATCTGAGTCC...AGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp ATTGTTGAACGCAGTGGGCATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGTTGGGACTCTGCATATaGTGGCAGACAGAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: IVERSGHSWHTRPSELVGLGLCI*WQTESS
Trigger: ACTTGACTCTGTCTGCCAGCATATGCAGAGTCCCAA...CCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGTTTCTATGGGCATCCTaGTCAGATTTAAAGTGCCCC +
Preference number: 2 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWFLWAS*SDLKCP
Trigger: GGGGCACTTTAAATCTGAGCAGGATGCCCATAGAAA...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATAAGCCCAGTTCTGGGTaGCATCAAGTGCTTGCTAGA +
Preference number: 2 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNKPSSG*HQVLAR
Trigger: TCTAGCAAGCACTTGATGCCACCCAGAACTGGGCTT...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GAGGTGAAAATTCCTTGCCGCTTCCCCAGAGTTGGTGAGATCACTCCCATGCCCAAGCCCAGTTCTGGGTaGCATCAAGTGCTTGCTAGA +
Preference number: 2 (lower is better)
Translates to: EVKIPCRFPRVGEITPMPKPSSG*HQVLAR
Trigger: TCTAGCAAGCACTTGATGCCACCCAGAACTGGGCTT...GGGCATGGGAGTGATCTCACCAACTCTGGGGAAGCGGCAAGGAATTTTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CATGCTGTTCCAAAATGTCGTCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTGCCCAGGGGAGTCTaGCCTGAGTGTGAGAGGATG +
Preference number: 2 (lower is better)
Translates to: HAVPKCRRSASSCTPSLHLPRGV*PECERM
Trigger: CATCCTCTCACACTCAGGCCAGACTCCCCTGGGCAG...ATGAAGACTGGGTGTGCAACTTGAGGCTGATCGACGACATTTTGGAACAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTCTAGGCCGTCTGAGCTaGTGGGGACTCAAGGACTGG +
Preference number: 2 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLLGRLS*WGLKDW
Trigger: CCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAG...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGGCTGGAGGAACTTGGTaGTGTTTGCTACAGGCACCG +
Preference number: 2 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWAGGTW*CLLQAP
Trigger: CGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGC...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTGGCCTGGCCAGAAGGTaGGTGCTGCTGAACGCTATT +
Preference number: 2 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLGLARR*VLLNAI
Trigger: AATAGCGTTCAGCAGCACTCACCTTCTGGCCAGGCC...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp CACCCAGTCTTCATCTGGGCTCACACAGGAGCCTTTCAAGAGAGCTTCAATGAAGTGGCCTTGGGACTCTaGATATGCTGGCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: HPVFIWAHTGAFQESFNEVALGL*ICWQTE
Trigger: CTCTGTCTGCCAGCATATGCAGAGTCCCAAGGCCAC...TTCATTGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGTTTCTATGGGCATCCTaGTCAGATTTAAAGTGCCCC +
Preference number: 2 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGFLWAS*SDLKCP
Trigger: GGGGCACTTTAAATCTGAGCAGGATGCCCATAGAAA...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTGTGTTCCCATCGCAGCGGGCACTTGTGCCTCCCAATCAGATGGCCTCTGAAGTTGGACGGCTTCAAATaGACTCATCTGTTGGGAGAT +
Preference number: 2 (lower is better)
Translates to: LCSHRSGHLCLPIRWPLKLDGFK*THLLGD
Trigger: ATCTCCCAACAGATGAGTCCATTTGAAGCCGTCCAA...CTTCAGAGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGAGGTGACTTGTTCTTaGACGGCTTCAAATGGACTC +
Preference number: 2 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNEVTCS*TASNGL
Trigger: GAGTCCATTTGAAGCCGTCCAAGAACAAGTCACCTC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTTTCAAGAGAGCTTCAGAGAGGATGGGACACTaGGGGCTGGAGGTGAAAATT +
Preference number: 2 (lower is better)
Translates to: LHTQSSSGLTQEPFKRASERMGH*GLEVKI
Trigger: AATTTTCACCTCCAGCCCCCAGTGTCCCATCCTCTC...TGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTTTCAAGAGAGCTTCACTGGCCATACCCTGCTaGAGGAACTTGGTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: LHTQSSSGLTQEPFKRASLAIPC*RNLVVF
Trigger: AAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAG...TGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp CACCCAGTCTTCATCTGGGCTCACACAGGAGCCTTTCAAGAGAGCTTCAATGAAGGCTACACTTGGAGGTaGCTTGTTCTTGGACGGCTT +
Preference number: 2 (lower is better)
Translates to: HPVFIWAHTGAFQESFNEGYTWR*LVLGRL
Trigger: AAGCCGTCCAAGAACAAGTCACCTCCAAGTGTAGCC...TTCATTGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp GAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGCACTTAACGATAAAGGCTACACTTGGAGGTaGCTTGTTCTTGGACGGCTT +
Preference number: 2 (lower is better)
Translates to: ENSPSLLVKCLCGALNDKGYTWR*LVLGRL
Trigger: AAGCCGTCCAAGAACAAGTCACCTCCAAGTGTAGCC...TTTATCGTTAAGTGCCCCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp CATGCTGTTCCAAAATGTCGTCGATCAGCCTCAAGTTGCACACCCAGTCTTCATAAGCTGGCCATACCCTaGTGGAGGAACTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: HAVPKCRRSASSCTPSLHKLAIP*WRNLVV
Trigger: CACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTT...ATGAAGACTGGGTGTGCAACTTGAGGCTGATCGACGACATTTTGGAACAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGTGGCATTTGTCAACTTaGACAACAACTCTTGGTCAT +
Preference number: 2 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWWHLST*TTTLGH
Trigger: ATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCA...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR-3UTR CCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGTTGGACGGCTTCAAATaGACTCATCTGTTGGGAGAT +
Preference number: 2 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWLDGFK*THLLGD
Trigger: ATCTCCCAACAGATGAGTCCATTTGAAGCCGTCCAA...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GAGGTGAAAATTCCTTGCCGCTTCCCCAGAGTTGGTGAGATCACTCCCATGCCCGAGTGGGATCATTCCTaGACTCAGATTGTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: EVKIPCRFPRVGEITPMPEWDHS*TQIVLK
Trigger: CTTCAGAACAATCTGAGTCCAGGAATGATCCCACTC...GGGCATGGGAGTGATCTCACCAACTCTGGGGAAGCGGCAAGGAATTTTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCTGGGGACTCAAGGACTaGGTGCCCAGGGAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVWGLKD*VPRELG
Trigger: TCCCAGCTCCCTGGGCACCCAGTCCTTGAGTCCCCA...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAACTAGGCCGTCTGAGCTaGTGGGGACTCAAGGACTGG +
Preference number: 2 (lower is better)
Translates to: SAVKLIRKELAETERFAKLGRLS*WGLKDW
Trigger: CCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAG...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTGCTGGAGGAACTTGGTaGTGTTTGCTACAGGCACCG +
Preference number: 2 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLAGGTW*CLLQAP
Trigger: CGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGC...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CACCCAGTCTTCATCTGGGCTCACACAGGAGCCTTTCAAGAGAGCTTCAATGAACAAAAAGTCGGCAGGTaGCAGCTCAGGGGGAATATC +
Preference number: 2 (lower is better)
Translates to: HPVFIWAHTGAFQESFNEQKVGR*QLRGNI
Trigger: GATATTCCCCCTGAGCTGCCACCTGCCGACTTTTTG...TTCATTGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCCTGTACCGGGCTCTaGCTGAGGCTCTGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYPCTGL*LRLWLP
Trigger: GGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGG...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTGTGTTCCCATCGCAGCGGGCACTTGTGCCTCCCAATCAGATGGCCTCTGAAGAATGGACTCATCTGTTaGGAGATATATGCATTCTGC +
Preference number: 2 (lower is better)
Translates to: LCSHRSGHLCLPIRWPLKNGLIC*EIYAFC
Trigger: GCAGAATGCATATATCTCCCAACAGATGAGTCCATT...CTTCAGAGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCCTGAGTGTGAGAGGATaGGACACTGGGGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVLSVRG*DTGGWR
Trigger: CCTCCAGCCCCCAGTGTCCCATCCTCTCACACTCAG...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGCACTTAACGATAAAGGACTCTGCATATGCTaGCAGACAGAGTCAAGTCTG +
Preference number: 2 (lower is better)
Translates to: ENSPSLLVKCLCGALNDKGLCIC*QTESSL
Trigger: CAGACTTGACTCTGTCTGCCAGCATATGCAGAGTCC...TTTATCGTTAAGTGCCCCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTTCATTTAGTGGGGGTTaGGGCTGGCGCAAAAAGTCG +
Preference number: 2 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLSFSGG*GWRKKS
Trigger: CGACTTTTTGCGCCAGCCCCAACCCCCACTAAATGA...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTTGCTCAGATTTAAAGTaGCCCAGCATCCTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLCSDLK*PSILGD
Trigger: GTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCA...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTAATGGACTCATCTGTTaGGAGATATATGCATTCTGC +
Preference number: 2 (lower is better)
Translates to: SISLKLHTQSSSGLTQEPNGLIC*EIYAFC
Trigger: GCAGAATGCATATATCTCCCAACAGATGAGTCCATT...AGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTAATGGACTCATCTGTTaGGAGATATATGCATTCTGC +
Preference number: 2 (lower is better)
Translates to: FKPGTARLNPTRVHTSWANGLIC*EIYAFC
Trigger: GCAGAATGCATATATCTCCCAACAGATGAGTCCATT...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGGGCCGTCTGAGCTGGTaGGGACTCAAGGACTGGGTG +
Preference number: 2 (lower is better)
Translates to: ICTRSLKNHQLSILSQVEGRLSW*GLKDWV
Trigger: CACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCC...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 90 bp CTCACACAGGAGCCTTTCAAGAGAGCTTCAATGAAATCTACCTCATaGCAGTCAGGTGACGAAATCAGATCATTTAGTGGGGGTTGGGGC +
Preference number: 2 (lower is better)
Translates to: LTQEPFKRASMKSTS*QSGDEIRSFSGGWG
Trigger: GCCCCAACCCCCACTAAATGATCTGATTTCGTCACCTGACTGCAATGAGGTAGATTTCATTGAAGCTCTCTTGAAAGGCTCCTGTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGCGCAGCGGGCACTTGTaGCTCCCAATCAGATGGCCT +
Preference number: 2 (lower is better)
Translates to: ICTRSLKNHQLSILSQVERSGHL*LPIRWP
Trigger: AGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCG...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATATGCCCTCGCAGCTCTaGTGCCTGGTGAGTGGGATC +
Preference number: 2 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHMPSQL*CLVSGI
Trigger: GATCCCACTCACCAGGCACCAGAGCTGCGAGGGCAT...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATCTGGTGGGGTGGCCTTaGGACTCTGCATATGCTGGC +
Preference number: 2 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHLVGWP*DSAYAG
Trigger: GCCAGCATATGCAGAGTCCCAAGGCCACCCCACCAG...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATAGGCAGGGGCACTTCTaGTGGGGTGGCCTTGGGACT +
Preference number: 2 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYRQGHF*WGGLGT
Trigger: AGTCCCAAGGCCACCCCACCAGAAGTGCCCCTGCCT...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTCAGAATTCTGGGCTGTaGCATTTTGAGCAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLQNSGL*HFEQQH
Trigger: ATGCTGCTGCTCAAAATGCCACAGCCCAGAATTCTG...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGCAATCAGATGGCCTCTaGAGGCAGGCCTGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: ICTRSLKNHQLSILSQVEQSDGL*RQAWPE
Trigger: TTCTGGCCAGGCCTGCCTTCAGAGGCCATCTGATTG...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAAACGCTATTATCCACTTaGCTGAGGGGTGTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: SAVKLIRKELAETERFAKTLLST*LRGVFP
Trigger: GGGGAAAACACCCCTCAGCCAAGTGGATAATAGCGT...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGAGCTCTGGTGCCTGGTaGGTGGGATCATTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: FLFGICQLAQQLLVISTLSSGAW*VGSFLD
Trigger: GTCCAGGAATGATCCCACTCACCAGGCACCAGAGCT...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAACTTCCCCAGAGTTGGTaGGATCACTCCCATGCCCTC +
Preference number: 2 (lower is better)
Translates to: CQLAQQLLVISTLLIALKLPQSW*DHSHAL
Trigger: GAGGGCATGGGAGTGATCTCACCAACTCTGGGGAAG...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATGGCCTGGCCAGAAGGTaGGTGCTGCTGAACGCTATT +
Preference number: 2 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHGLARR*VLLNAI
Trigger: AATAGCGTTCAGCAGCACTCACCTTCTGGCCAGGCC...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCAATCAGATGGCCTCTaGAGGCAGGCCTGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYQSDGL*RQAWPE
Trigger: TTCTGGCCAGGCCTGCCTTCAGAGGCCATCTGATTG...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCGAGGTGAAAATTCCTTaGCGCTTCCCCAGAGTTGGT +
Preference number: 2 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVEVKIP*RFPRVG
Trigger: ACCAACTCTGGGGAAGCGGCAAGGAATTTTCACCTC...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TCACACAAGGCAATAGGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTGACTCAAGGACTGGGTaGCCAGGGAGCTGGGACAGA +
Preference number: 2 (lower is better)
Translates to: SHKAIGFLVNIEINGQVVDSRTG*PGSWDR
Trigger: TCTGTCCCAGCTCCCTGGGCACCCAGTCCTTGAGTC...AACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCCTATTGCCTTGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCGCAGTGGGCATTCTTaGCACACTAGGCCGTCTGAG +
Preference number: 2 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYRSGHS*HTRPSE
Trigger: CTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCG...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCCGCTGTGACCCATaGAGCATTGTTGAACGCAGT +
Preference number: 2 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHCRCDP*SIVERS
Trigger: ACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCA...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCAAGTGCTTGCTAGATaGGGGGCTTGCCTTGATCCG +
Preference number: 2 (lower is better)
Translates to: FLFGICQLAQQLLVISTLQVLAR*GACLDP
Trigger: CGGATCAAGGCAAGCCCCCCATCTAGCAAGCACTTG...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATCCTGCTGGAGGAACTTaGTGGTGTTTGCTACAGGCA +
Preference number: 2 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHPAGGT*WCLLQA
Trigger: TGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGG...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATGAAGGTGAGTGCTGCTaGACGCTATTATCCACTTGG +
Preference number: 2 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHEGECC*TLLSTW
Trigger: CCAAGTGGATAATAGCGTTCAGCAGCACTCACCTTC...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR TCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCACCACTTCCTAGAGTaGTGTCACCATGGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYHHFLE*CHHGGF
Trigger: GAAACCCCCATGGTGACATCACTCTAGGAAGTGGTG...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR-3UTR CCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATCCTGCTGGAGGAACTTaGTGGTGTTTGCTACAGGCA +
Preference number: 2 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHPAGGT*WCLLQA
Trigger: TGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGG...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATTCATTTAGTGGGGGTTaGGGCTGGCGCAAAAAGTCG +
Preference number: 2 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYSFSGG*GWRKKS
Trigger: CGACTTTTTGCGCCAGCCCCAACCCCCACTAAATGA...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATCACCCAGTCTTCATCTaGGCTCACACAGGAGCCTTT +
Preference number: 2 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHHPVFI*AHTGAF
Trigger: AAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTG...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR GCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAAGCAAACAACACGGTCTaGATATTTGTAACATTGTAT +
Preference number: 2 (lower is better)
Translates to: SAVKLIRKELAETERFAKANNTV*IFVTLY
Trigger: ATACAATGTTACAAATATGCAGACCGTGTTGTTTGC...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR-3UTR CCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGAGGTGACTTGTTCTTaGACGGCTTCAAATGGACTC +
Preference number: 2 (lower is better)
Translates to: FQICTRSLKNHQLSILSQEVTCS*TASNGL
Trigger: GAGTCCATTTGAAGCCGTCCAAGAACAAGTCACCTC...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATTTAACAAGGTATCACTaGAGCAAACAACACGGTCTG +
Preference number: 2 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYLTRYH*SKQHGL
Trigger: CAGACCGTGTTGTTTGCTCCAGTGATACCTTGTTAA...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR-3UTR TCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATTATGTACACGTAGCTTaGAAAATCACCAGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYYVHVA*KITSFP
Trigger: TGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATA...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR CAA 90 bp GGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTTTCTATTaGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACAT +
Preference number: 2 (lower is better)
Translates to: GFLVNIEINGQVVFY*AFVNLHNNSWSYPH
Trigger: ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR GCA 72 bp GTGTTTGCTACAGGCACCGGGCCCTGTACCGGGCTCTaGCTGAGGCTCTGGCTGCCCAGCAGGCTGAAGCTG +
Preference number: 3 (lower is better)
Translates to: VFATGTGPCTGL*LRLWLPSRLKL
Trigger: CAGCTTCAGCCTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTAGCAAACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 72 bp GCTGGCCATACCCTGCTGGAGGAACTTGGTGGTGTTTaGTACAGGCACCGGGCCCTGTACCGGGCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: AGHTLLEELGGV*YRHRALYRALP
Trigger: AGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 72 bp GCAGTGGGCATTCTTGGCACACTAGGCCGTCTGAGCTaGTGGGGACTCAAGGACTGGGTGCCCAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: AVGILGTLGRLS*WGLKDWVPREL
Trigger: CAGCTCCCTGGGCACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 72 bp AGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTTaGTGGCTCGATGCCCTGTATGGGGCTCAGGGGACT +
Preference number: 3 (lower is better)
Translates to: SSSSGGSSSHIA*WLDALYGAQGT
Trigger: AGTCCCCTGAGCCCCATACAGGGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 72 bp ACTGGCTGGCAGCAACGGCAGAAGCAGCAGCAGCGGTaGCAGCAGCAGCCACATAGCTTGGTGGCTCGATGC +
Preference number: 3 (lower is better)
Translates to: TGWQQRQKQQQR*QQQPHSLVARC
Trigger: GCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCTGCCGTTGCTGCCAGCCAGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 72 bp CAGGGGCACTTGTGTTCCCATCGCAGCGGGCACTTGTaGCTCCCAATCAGATGGCCTCTGAAGGCAGGCCTG +
Preference number: 3 (lower is better)
Translates to: QGHLCSHRSGHL*LPIRWPLKAGL
Trigger: CAGGCCTGCCTTCAGAGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAAGTGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp ATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGACTCAAGGACTGGGTGCCCGCCGCTTCCCCAGAGTaGGTGAGATCACTCCCATGC +
Preference number: 3 (lower is better)
Translates to: ILGTLGRLSWWGLKDWVPAASPE*VRSLPC
Trigger: GCATGGGAGTGATCTCACCAACTCTGGGGAAGCGGC...GGGCACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 72 bp GGCACTTCTGGTGGGGTGGCCTTGGGACTCTGCATATaGTGGCAGACAGAGTCAAGTCTGCCCAGGGGAGTC +
Preference number: 3 (lower is better)
Translates to: GTSGGVALGLCI*WQTESSLPRGV
Trigger: GACTCCCCTGGGCAGACTTGACTCTGTCTGCCAGCATATGCAGAGTCCCAAGGCCACCCCACCAGAAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGCATCGCAGCGGGCACTaGTGCCTCCCAATCAGATGG +
Preference number: 3 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWHRSGH*CLPIRW
Trigger: CCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATG...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCTGAAGCTGGGGTTGTaGGCCAGGGGCACTTGTGTT +
Preference number: 3 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLLKLGL*ARGTCV
Trigger: AACACAAGTGCCCCTGGCCAACAACCCCAGCTTCAG...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp GGGGAATATCCGTTCTGTCGAACGGACCTGGGAACTGGCTGGCAGCAACGGCAGCAGCAGCCACATAGCTaGGTGGCTCGATGCCCTGTA +
Preference number: 3 (lower is better)
Translates to: GEYPFCRTDLGTGWQQRQQQPHS*VARCPV
Trigger: TACAGGGCATCGAGCCACCAAGCTATGTGGCTGCTG...CTGCCGTTGCTGCCAGCCAGTTCCCAGGTCCGTTCGACAGAACGGATATTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGCTGAAGCTGGGGTTGTaGGCCAGGGGCACTTGTGTT +
Preference number: 3 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWLKLGL*ARGTCV
Trigger: AACACAAGTGCCCCTGGCCAACAACCCCAGCTTCAG...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTGCCGCTTCCCCAGAGTaGGTGAGATCACTCCCATGC +
Preference number: 3 (lower is better)
Translates to: FKPGTARLNPTRVHTSWAAASPE*VRSLPC
Trigger: GCATGGGAGTGATCTCACCAACTCTGGGGAAGCGGC...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp GGGGAATATCCGTTCTGTCGAACGGACCTGGGAACTGGCTGGCAGCAACGGCAGGTGACCCATGCAGCATaGTTGAACGCAGTGGGCATT +
Preference number: 3 (lower is better)
Translates to: GEYPFCRTDLGTGWQQRQVTHAA*LNAVGI
Trigger: AATGCCCACTGCGTTCAACAATGCTGCATGGGTCAC...CTGCCGTTGCTGCCAGCCAGTTCCCAGGTCCGTTCGACAGAACGGATATTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATCATCGCAGCGGGCACTaGTGCCTCCCAATCAGATGG +
Preference number: 3 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNHRSGH*CLPIRW
Trigger: CCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATG...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTAGGCTGAAGCTGGGGTaGTTGGCCAGGGGCACTTGT +
Preference number: 3 (lower is better)
Translates to: SISLKLHTQSSSGLTQEPRLKLG*LARGTC
Trigger: ACAAGTGCCCCTGGCCAACAACCCCAGCTTCAGCCT...AGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR TCA 72 bp GGAGGTGAAAATTCCTTGCCGCTTCCCCAGAGTTGGTaGGATCACTCCCATGCCCTCGCAGCTCTGGTGCCT +
Preference number: 3 (lower is better)
Translates to: GGENSLPLPQSW*DHSHALAALVP
Trigger: AGGCACCAGAGCTGCGAGGGCATGGGAGTGATCTCACCAACTCTGGGGAAGCGGCAAGGAATTTTCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp CATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGACTCAAGGACTGGGTGCCTTGATCCGGCTACACTaGGAGGTGACTTGTTCTTGG +
Preference number: 3 (lower is better)
Translates to: HSWHTRPSELVGTQGLGALIRLH*EVTCSW
Trigger: CCAAGAACAAGTCACCTCCAAGTGTAGCCGGATCAA...GGCACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTCAGCAGCCACATAGCTaGGTGGCTCGATGCCCTGTA +
Preference number: 3 (lower is better)
Translates to: SISLKLHTQSSSGLTQEPQQPHS*VARCPV
Trigger: TACAGGGCATCGAGCCACCAAGCTATGTGGCTGCTG...AGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 72 bp GGGTGTTTTCCCCGAAACTGCTGTGGTCACAGCTGCTaGCGCTGTGACCCATGCAGCATTGTTGAACGCAGT +
Preference number: 3 (lower is better)
Translates to: GCFPRNCCGHSC*RCDPCSIVERS
Trigger: ACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCAGCAGCTGTGACCACAGCAGTTTCGGGGAAAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 72 bp AAGCCCAGTTCTGGGTGGCATCAAGTGCTTGCTAGATaGGGGGCTTGCCTTGATCCGGCTACACTTGGAGGT +
Preference number: 3 (lower is better)
Translates to: KPSSGWHQVLAR*GACLDPATLGG
Trigger: ACCTCCAAGTGTAGCCGGATCAAGGCAAGCCCCCCATCTAGCAAGCACTTGATGCCACCCAGAACTGGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 72 bp GACCCATGCAGCATTGTTGAACGCAGTGGGCATTCTTaGCACACTAGGCCGTCTGAGCTGGTGGGGACTCAA +
Preference number: 3 (lower is better)
Translates to: DPCSIVERSGHS*HTRPSELVGTQ
Trigger: TTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGGGAGGTGACTTGTTCTaGGACGGCTTCAAATGGACT +
Preference number: 3 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWGGDLF*DGFKWT
Trigger: AGTCCATTTGAAGCCGTCCAAGAACAAGTCACCTCC...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCACACTTGGAGGTGACTaGTTCTTGGACGGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLTLGGD*FLDGFK
Trigger: TTTGAAGCCGTCCAAGAACAAGTCACCTCCAAGTGT...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp GGGCTCAGGGGACTAAAGCTGGCCATACCCTGCTGGAGGAACTTGGTGGTGTTTGTGACCCATGCAGCATaGTTGAACGCAGTGGGCATT +
Preference number: 3 (lower is better)
Translates to: GLRGLKLAIPCWRNLVVFVTHAA*LNAVGI
Trigger: AATGCCCACTGCGTTCAACAATGCTGCATGGGTCAC...AAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTTTAGTCCCCTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGAACGCTATTATCCACTaGGCTGAGGGGTGTTTTCCC +
Preference number: 3 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWNAIIH*AEGCFP
Trigger: GGGAAAACACCCCTCAGCCAAGTGGATAATAGCGTT...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR TCA 72 bp ATCAGATGGCCTCTGAAGGCAGGCCTGGCCAGAAGGTaGGTGCTGCTGAACGCTATTATCCACTTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: IRWPLKAGLARR*VLLNAIIHLAE
Trigger: CTCAGCCAAGTGGATAATAGCGTTCAGCAGCACTCACCTTCTGGCCAGGCCTGCCTTCAGAGGCCATCTGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 72 bp CAGTCAGGTGACGAAATCAGATCATTTAGTGGGGGTTaGGGCTGGCGCAAAAAGTCGGCAGGTGGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: QSGDEIRSFSGG*GWRKKSAGGSS
Trigger: TGAGCTGCCACCTGCCGACTTTTTGCGCCAGCCCCAACCCCCACTAAATGATCTGATTTCGTCACCTGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 72 bp ATGGTAAAGGGAGGAGGATACTCTAGCTCCTCCAGGTaGATTGCTGAGACAGGGCTCGGCTCACACACTGTC +
Preference number: 3 (lower is better)
Translates to: MVKGGGYSSSSR*IAETGLGSHTV
Trigger: GACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGAGGAGCTAGAGTATCCTCCTCCCTTTACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR CCA 72 bp ACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTaGGCTTTTTCTCTCGGTCTGAATGGTAAAGGGAGG +
Preference number: 3 (lower is better)
Translates to: TARLNPTRVHTS*AFSLGLNGKGR
Trigger: CCTCCCTTTACCATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR-3UTR CAA 90 bp TCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTGGGCTCACACAGGAGCCTTTGATCCGGCTACACTaGGAGGTGACTTGTTCTTGG +
Preference number: 3 (lower is better)
Translates to: SISLKLHTQSSSGLTQEPLIRLH*EVTCSW
Trigger: CCAAGAACAAGTCACCTCCAAGTGTAGCCGGATCAA...AGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp GAGGTGAAAATTCCTTGCCGCTTCCCCAGAGTTGGTGAGATCACTCCCATGCCCTTGATCCGGCTACACTaGGAGGTGACTTGTTCTTGG +
Preference number: 3 (lower is better)
Translates to: EVKIPCRFPRVGEITPMPLIRLH*EVTCSW
Trigger: CCAAGAACAAGTCACCTCCAAGTGTAGCCGGATCAA...GGGCATGGGAGTGATCTCACCAACTCTGGGGAAGCGGCAAGGAATTTTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGAACGCTATTATCCACTaGGCTGAGGGGTGTTTTCCC +
Preference number: 3 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWNAIIH*AEGCFP
Trigger: GGGAAAACACCCCTCAGCCAAGTGGATAATAGCGTT...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR TCA 72 bp ACAACTGCGGGTATGGATCGACACCACTTCCTAGAGTaGTGTCACCATGGGGGTTTCTATGGGCATCCTGCT +
Preference number: 3 (lower is better)
Translates to: TTAGMDRHHFLE*CHHGGFYGHPA
Trigger: AGCAGGATGCCCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCCGCAGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR GCA 72 bp CATGCTGTTCCAAAATGTCGTCGATCAGCCTCAAGTTaGACACCCAGTCTTCATCTGGGCTCACACAGGAGC +
Preference number: 3 (lower is better)
Translates to: HAVPKCRRSASS*TPSLHLGSHRS
Trigger: GCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGACGACATTTTGGAACAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR GCA 72 bp AGAGTGATGTCACCATGGGGGTTTCTATGGGCATCCTaGTCAGATTTAAAGTGCCCCAGCATCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: RVMSPWGFLWAS*SDLKCPSILGD
Trigger: GTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCAGGATGCCCATAGAAACCCCCATGGTGACATCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp GGGGAATATCCGTTCTGTCGAACGGACCTGGGAACTGGCTGGCAGCAACGGCAGAAATGGACTCATCTGTaGGGAGATATATGCATTCTG +
Preference number: 3 (lower is better)
Translates to: GEYPFCRTDLGTGWQQRQKWTHL*GDICIL
Trigger: CAGAATGCATATATCTCCCAACAGATGAGTCCATTT...CTGCCGTTGCTGCCAGCCAGTTCCCAGGTCCGTTCGACAGAACGGATATTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp ATTCTTGGCACACTAGGCCGTCTGAGCTGGTGGGGACTCAAGGACTGGGTGCCCAAATGGACTCATCTGTaGGGAGATATATGCATTCTG +
Preference number: 3 (lower is better)
Translates to: ILGTLGRLSWWGLKDWVPKWTHL*GDICIL
Trigger: CAGAATGCATATATCTCCCAACAGATGAGTCCATTT...GGGCACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGTTGGCATTTGTCAACTaGCACAACAACTCTTGGTCA +
Preference number: 3 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWLAFVN*HNNSWS
Trigger: TGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAA...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR TCA 72 bp ATCCTGCTCAGATTTAAAGTGCCCCAGCATCCTGGGTaGCTTGCCCAGAATTCTGGGCTGTGGCATTTTGAG +
Preference number: 3 (lower is better)
Translates to: ILLRFKVPQHPG*LAQNSGLWHFE
Trigger: CTCAAAATGCCACAGCCCAGAATTCTGGGCAAGTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 72 bp GTCGATCAGCCTCAAGTTGCACACCCAGTCTTCATCTaGGCTCACACAGGAGCCTTTCAAGAGAGCTTCAAT +
Preference number: 3 (lower is better)
Translates to: VDQPQVAHPVFI*AHTGAFQESFN
Trigger: ATTGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CCA 72 bp CCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATaGGCATCCTGCTCAGATTTAAAGTGCCCCAGCATC +
Preference number: 3 (lower is better)
Translates to: PLPRVMSPWGFL*ASCSDLKCPSI
Trigger: GATGCTGGGGCACTTTAAATCTGAGCAGGATGCCCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGTTGGTCATATCCACATaGCTCATTGCATTAAAACCA +
Preference number: 3 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWLVIST*LIALKP
Trigger: TGGTTTTAATGCAATGAGCAATGTGGATATGACCAA...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR GCA 72 bp GCTGACAACACCACTCAAATTGTAACGGGAGACAACTaGGGGTATGGATCGACACCACTTCCTAGAGTGATG +
Preference number: 3 (lower is better)
Translates to: ADNTTQIVTGDN*GYGSTPLPRVM
Trigger: CATCACTCTAGGAAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTTGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR-3UTR CAA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTGGAGGTGACTTGTTCTaGGACGGCTTCAAATGGACT +
Preference number: 3 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLGGDLF*DGFKWT
Trigger: AGTCCATTTGAAGCCGTCCAAGAACAAGTCACCTCC...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATGCCGCTTCCCCAGAGTaGGTGAGATCACTCCCATGC +
Preference number: 3 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYAASPE*VRSLPC
Trigger: GCATGGGAGTGATCTCACCAACTCTGGGGAAGCGGC...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAAACCCATGCAGCATTGTaGAACGCAGTGGGCATTCTT +
Preference number: 3 (lower is better)
Translates to: SAVKLIRKELAETERFAKTHAAL*NAVGIL
Trigger: AAGAATGCCCACTGCGTTCAACAATGCTGCATGGGT...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAATCGATCAGCCTCAAGTaGCACACCCAGTCTTCATCT +
Preference number: 3 (lower is better)
Translates to: SAVKLIRKELAETERFAKSISLK*HTQSSS
Trigger: AGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR TCA 72 bp CTGGGCTCACACAGGAGCCTTTCAAGAGAGCTTCAATaGAATCTACCTCATTGCAGTCAGGTGACGAAATCA +
Preference number: 3 (lower is better)
Translates to: LGSHRSLSRELQ*NLPHCSQVTKS
Trigger: TGATTTCGTCACCTGACTGCAATGAGGTAGATTTCATTGAAGCTCTCTTGAAAGGCTCCTGTGTGAGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR TCA 72 bp ATTTTGTCACAGGTAGAGAGAGGGATAAGCATGGGCTaGCAACACCACTCAAATTGTAACGGGAGACAACTG +
Preference number: 3 (lower is better)
Translates to: ILSQVERGISMG*QHHSNCNGRQL
Trigger: CAGTTGTCTCCCGTTACAATTTGAGTGGTGTTGTCAGCCCATGCTTATCCCTCTCTCTACCTGTGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR TCA 72 bp CCCCCAAACCACAGAGCCTTACATCAAAACAAATACTaGAAGGCTTTAAACCAGGAACAGCTCGCCTTAACC +
Preference number: 3 (lower is better)
Translates to: PPNHRALHQNKY*KALNQEQLALT
Trigger: GGTTAAGGCGAGCTGTTCCTGGTTTAAAGCCTTTCAGTATTTGTTTTGATGTAAGGCTCTGTGGTTTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR-3UTR CAA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAAATATGTACACGTAGCTaGAAAAATCACCAGCTTTCC +
Preference number: 3 (lower is better)
Translates to: SAVKLIRKELAETERFAKICTRS*KNHQLS
Trigger: GGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
ENST00000432680.7
3UTR-3UTR CAA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGACACTTGGAGGTGACTaGTTCTTGGACGGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: FLFGICQLAQQLLVISTLTLGGD*FLDGFK
Trigger: TTTGAAGCCGTCCAAGAACAAGTCACCTCCAAGTGT...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATACACTTGGAGGTGACTaGTTCTTGGACGGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHTLGGD*FLDGFK
Trigger: TTTGAAGCCGTCCAAGAACAAGTCACCTCCAAGTGT...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR-3UTR CAA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGAAATGGACTCATCTGTaGGGAGATATATGCATTCTG +
Preference number: 3 (lower is better)
Translates to: FLFGICQLAQQLLVISTLKWTHL*GDICIL
Trigger: CAGAATGCATATATCTCCCAACAGATGAGTCCATTT...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
CDS-3UTR CCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCGCTGCAGCTGCAAGGTaGCAGTGGCCGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSAAAAR*QWPWRR
Trigger: CCTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGC...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
3UTR CAA 72 bp GGCCAGGGGCACTTGTGTTCCCATCGCAGCGGGCACTaGTGCCTCCCAATCAGATGGCCTCTGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GQGHLCSHRSGH*CLPIRWPLKAG
Trigger: GCCTGCCTTCAGAGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAAGTGCCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 72 bp CAGCAGGCTGAAGCTGGGGTTGTTGGCCAGGGGCACTaGTGTTCCCATCGCAGCGGGCACTTGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QQAEAGVVGQGH*CSHRSGHLCLP
Trigger: TGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAAGTGCCCCTGGCCAACAACCCCAGCTTCAGCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 72 bp AGCTGGCCATACCCTGCTGGAGGAACTTGGTGGTGTTaGCTACAGGCACCGGGCCCTGTACCGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SWPYPAGGTWWC*LQAPGPVPGSA
Trigger: GGCAGAGCCCGGTACAGGGCCCGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 72 bp AAGCAGCAGCAGCGGTGGCAGCAGCAGCCACATAGCTaGGTGGCTCGATGCCCTGTATGGGGCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: KQQQRWQQQPHS*VARCPVWGSGD
Trigger: GTCCCCTGAGCCCCATACAGGGCATCGAGCCACCAAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
CDS-3UTR GCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCTCGCGGCCAAGTTCATaGTGGCGGCGCTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLSRPSS*WRRCSG
Trigger: GCCACTGCAGCGCCGCCAGCATGAACTTGGCCGCGA...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCTGGGGACTCAAGGACTaGGTGCCCAGGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSWGLKD*VPRELG
Trigger: TCCCAGCTCCCTGGGCACCCAGTCCTTGAGTCCCCA...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCCCTGCTTGCTGGCTaGCAACGCCTTCAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLPLLAG*QRLQLV
Trigger: CACCAGCTGAAGGCGTTGGCAGCCAGCAAGCAGGGG...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCAGCTTGGTGGCTCGATaGCCTGTATGGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSSLVAR*PVWGSG
Trigger: CCCTGAGCCCCATACAGGGCATCGAGCCACCAAGCT...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCTGCCCAGGGGAGTCTaGCCTGAGTGTGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSLPRGV*PECERM
Trigger: CATCCTCTCACACTCAGGCCAGACTCCCCTGGGCAG...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCAGGGGCACTTCTGGTaGGGTGGCCTTGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLQGHFW*GGLGTL
Trigger: CAGAGTCCCAAGGCCACCCCACCAGAAGTGCCCCTG...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCGGTGGTGGGTGTGGTaGTGGCACTGGGCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGRWWVW*WHWAVR
Trigger: CCTTACCGCCCAGTGCCATCACCACACCCACCACCG...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTCTGGGCGATAGGGTaGGGACGGCCCAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGLWAIG*GRPRVA
Trigger: AGCAACCCTGGGCCGTCCCCACCCTATCGCCCAGAG...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCTCCTCTAGCAGCTCTTaGAGCTCCTGGTCTACAGCC +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSSSSSS*SSWSTA
Trigger: GGCTGTAGACCAGGAGCTTCAAGAGCTGCTAGAGGA...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGTGGCTGAGGAGGCCTaGGTTGGTGTCGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNVAEEA*VGVGCC
Trigger: GCAGCAGCCGACACCAACGCAGGCCTCCTCAGCCAC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCGAACTTGGTGGTGTTTaGTACAGGCACCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLELGGV*YRHRAL
Trigger: CAGGGCCCGGTGCCTGTAGCAAACACCACCAAGTTC...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCACAGGGAGCATGGCCTaGACCTGGCTCTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLTGSMA*TWLLDC
Trigger: ACAGTCCAAGAGCCAGGTCCAGGCCATGCTCCCTGT...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGCTCTGGGGGCTGAATaGGGGTGGTGGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNALGAE*GWWWWQ
Trigger: CTGCCACCACCACCACCCCCATTCAGCCCCCAGAGC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000432680.7
3UTR CAA 72 bp AGGGGACTAAAGCTGGCCATACCCTGCTGGAGGAACTaGGTGGTGTTTGCTACAGGCACCGGGCCCTGTACC +
Preference number: 4 (lower is better)
Translates to: RGLKLAIPCWRN*VVFATGTGPCT
Trigger: GGTACAGGGCCCGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTTTAGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
CDS-3UTR TCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGGCAAGAATGGAGCTCTaGGGGCCGAACTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGARMEL*GPNCGC
Trigger: ACAGCCGCAGTTCGGCCCTCAGAGCTCCATTCTTGC...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCAGCACCTGGGCCCATTaGAAGGGTGACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSSTWAH*KGDIFK
Trigger: CTTGAAGATGTCACCCTTGCAATGGGCCCAGGTGCT...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGTGTTGCTGCTGCTGCTaGTGCAGCTGCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWCCCCC*CSCKVA
Trigger: TGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACA...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCTGTTTTCCCCGAAACTaGTGTGGTCACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSCFPRN*CGHSCC
Trigger: GCAGCAGCTGTGACCACAGCAGTTTCGGGGAAAACA...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGGGGTGCCCAGGGAGCTaGGACAGAACCCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWGCPGS*DRTQAG
Trigger: CCCTGCCTGGGTTCTGTCCCAGCTCCCTGGGCACCC...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTAGGCCGTCTGAGCTaGTGGGGACTCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGLGRLS*WGLKDW
Trigger: CCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAG...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTGAGGCCACTGATCGCTaGAAACGCTGGGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKPGTARLNPTRVHTSWAEATDR*KRWGCC
Trigger: GCAGCAACCCCAGCGTTTTCAGCGATCAGTGGCCTC...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTGCTGTGGTCACAGCTaGTGCCGCTGTGACCCATGC +
Preference number: 4 (lower is better)
Translates to: FKPGTARLNPTRVHTSWACCGHS*CRCDPC
Trigger: GCATGGGTCACAGCGGCAGCAGCTGTGACCACAGCA...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCTCTGAACCGAAGGCTTaGGAGTTGTGCTTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSSEPKA*ELCLGL
Trigger: CAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGA...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGACACCATGAGGCTCTaGGGGCTGAATGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNDTMRL*GLNGGG
Trigger: ACCACCCCCATTCAGCCCCCAGAGCCTCATGGTGTC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGACGGCCCAGGGTTGCTaGCAGGCAGAGCAGACATCA +
Preference number: 4 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWTAQGC*QAEQTS
Trigger: TGATGTCTGCTCTGCCTGCCAGCAACCCTGGGCCGT...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGAGGTGGCAGTGGCCGTaGAGGAGGCAGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWRWQWP*RRQWLR
Trigger: CCTCAGCCACTGCCTCCTCCACGGCCACTGCCACCT...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATCTGGTGGGGTGGCCTTaGGACTCTGCATATGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNLVGWP*DSAYAG
Trigger: GCCAGCATATGCAGAGTCCCAAGGCCACCCCACCAG...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCACCCAGTCTTCATCTaGGCTCACACAGGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLHPVFI*AHTGAF
Trigger: AAAGGCTCCTGTGTGAGCCCAGATGAAGACTGGGTG...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
3UTR CAA 72 bp GTCACAGCTGCTGCCGCTGTGACCCATGCAGCATTGTaGAACGCAGTGGGCATTCTTGGCACACTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: VTAAAAVTHAAL*NAVGILGTLGR
Trigger: ACGGCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCAGCAGCTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 72 bp GTGGTCACAGCTGCTGCCGCTGTGACCCATGCAGCATaGTTGAACGCAGTGGGCATTCTTGGCACACTAGGC +
Preference number: 4 (lower is better)
Translates to: VVTAAAAVTHAA*LNAVGILGTLG
Trigger: GCCTAGTGTGCCAAGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCAGCAGCTGTGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
CDS-3UTR TCA 90 bp GAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGCACTTAACGATAAAGGAGGAGGCAGTGGCTaGGGAGGCCTGCGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ENSPSLLVKCLCGALNDKGGGSG*GGLRWC
Trigger: ACACCAACGCAGGCCTCCTCAGCCACTGCCTCCTCC...TTTATCGTTAAGTGCCCCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGGGCTACACTTGGAGGTaGCTTGTTCTTGGACGGCTT +
Preference number: 4 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWGYTWR*LVLGRL
Trigger: AAGCCGTCCAAGAACAAGTCACCTCCAAGTGTAGCC...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGGCCTGGCCAGAAGGTaGGTGCTGCTGAACGCTATT +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNGLARR*VLLNAI
Trigger: AATAGCGTTCAGCAGCACTCACCTTCTGGCCAGGCC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATCAATCAGATGGCCTCTaGAGGCAGGCCTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNQSDGL*RQAWPE
Trigger: TTCTGGCCAGGCCTGCCTTCAGAGGCCATCTGATTG...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCGGGATAAGCATGGGCTaGCAACACCACTCAAATTGT +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSGISMG*QHHSNC
Trigger: ACAATTTGAGTGGTGTTGTCAGCCCATGCTTATCCC...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCTCGGTGACACTATCTaGTTACTGGTGGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSLGDTI*LLVEGI
Trigger: GATTCCTTCCACCAGTAAGCAGATAGTGTCACCGAG...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGTGCCGCTGTGACCCATaGAGCATTGTTGAACGCAGT +
Preference number: 4 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWCRCDP*SIVERS
Trigger: ACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCA...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGAAGCTGGCCATACCCTaGTGGAGGAACTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGKLAIP*WRNLVV
Trigger: CACCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTT...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGGACGATTTCCCACCATaGCGAAATGGGGAAGCATGC +
Preference number: 4 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWDDFPP*RNGEAC
Trigger: GCATGCTTCCCCATTTCGCCATGGTGGGAAATCGTC...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCTACCCGACAAGGTATTaGACGACATGCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLYPTRY*TTCRTP
Trigger: TGGTGTCCTGCATGTCGTCCAATACCTTGTCGGGTA...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCTTTGGAGAAGGGTCTTaGATTTTGGTGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSFGEGS*ILVSSS
Trigger: AGAGGAGCTCACCAAAATTCAAGACCCTTCTCCAAA...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTGATTACTGGTGGGAGTaGGGCTTCGGATCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: FKPGTARLNPTRVHTSWADYWWE*GFGSGN
Trigger: GTTCCCTGATCCGAAGCCTCACTCCCACCAGTAATC...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGAAGAATGGTCAGGCTaGTGCTGCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWEEWSG*CCCCCC
Trigger: GCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTC...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGTGTGGTCACAGCTGCTaGCGCTGTGACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWCGHSC*RCDPCS
Trigger: GCTGCATGGGTCACAGCGGCAGCAGCTGTGACCACA...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGCGCAGCGGGCACTTGTaGCTCCCAATCAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWRSGHL*LPIRWP
Trigger: AGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCG...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGTGCTCAGATTTAAAGTaGCCCAGCATCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWCSDLK*PSILGD
Trigger: GTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCA...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATAGCATGGCCTGGACCTaGCTCTTGGACTGTGCCATT +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNSMAWT*LLDCAI
Trigger: AATGGCACAGTCCAAGAGCCAGGTCCAGGCCATGCT...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGGCTAGAGAGCTTCTCTaGGCGATAGGGTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWARELL*AIGWGR
Trigger: CCGTCCCCACCCTATCGCCCAGAGAAGCTCTCTAGC...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCGGCTCAGAAACAAAATaGGACAAGGGCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLGSETK*DKGLVL
Trigger: CAACACCAAGCCCTTGTCCCATTTTGTTTCTGAGCC...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGATGGAGGGCATCTTCTaGGGACCCGGCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWMEGIF*GPGSET
Trigger: TGTTTCTGAGCCGGGTCCCCAGAAGATGCCCTCCAT...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGAACCAGTGGCTCTTCTaGCTTCGTCCCCAGTATCTT +
Preference number: 4 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGNQWLF*LRPQYL
Trigger: AAGATACTGGGGACGAAGCCAGAAGAGCCACTGGTT...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGCCTGGACCTGGCTCTTaGACTGTGCCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWPGPGS*TVPLKN
Trigger: GTTCTTCAATGGCACAGTCCAAGAGCCAGGTCCAGG...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGAAGAAGCCCAGTTCTaGGTGGCATCAAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNEEAQF*VASSAC
Trigger: GCAAGCACTTGATGCCACCCAGAACTGGGCTTCTTC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTAGCAGCCACATAGCTTaGTGGCTCGATGCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: FKPGTARLNPTRVHTSWASSHIA*WLDALY
Trigger: ATACAGGGCATCGAGCCACCAAGCTATGTGGCTGCT...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGGGAAGCATGCTCTTaGTTACAAGCCGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWGEACS*LQADFS
Trigger: GGAAAAGTCGGCTTGTAATCAAGAGCATGCTTCCCC...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGTCCAAGTGTGACATCTaGACCGAAGGCTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWSKCDI*TEGLGV
Trigger: AACTCCCAAGCCTTCGGTTCAGATGTCACACTTGGA...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGGACTCAGATTGTTCTaGAGAAGCCCAGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNGLRLF*RSPVLG
Trigger: ACCCAGAACTGGGCTTCTTCAGAACAATCTGAGTCC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAAGGCTGCCCAGCAGGCTaGAGCTGGGGTTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SAVKLIRKELAETERFAKGCPAG*SWGCWP
Trigger: TGGCCAACAACCCCAGCTTCAGCCTGCTGGGCAGCC...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCTATGTACACGTAGCTTaGAAAATCACCAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSYVHVA*KITSFP
Trigger: TGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATA...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGCTTAAAGATCACATTTaGTTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWLKDHI*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAG...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATGAGGTGAAAATTCCTTaGCGCTTCCCCAGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNEVKIP*RFPRVG
Trigger: ACCAACTCTGGGGAAGCGGCAAGGAATTTTCACCTC...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCAATGGACTCATCTGTTaGGAGATATATGCATTCTGC +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSNGLIC*EIYAFC
Trigger: GCAGAATGCATATATCTCCCAACAGATGAGTCCATT...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGACGCTATTATCCACTTaGCTGAGGGGTGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWTLLST*LRGVFP
Trigger: GGGGAAAACACCCCTCAGCCAAGTGGATAATAGCGT...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCTTAACAAGGTATCACTaGAGCAAACAACACGGTCTG +
Preference number: 4 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLLTRYH*SKQHGL
Trigger: CAGACCGTGTTGTTTGCTCCAGTGATACCTTGTTAA...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
3UTR CAA 72 bp GGGGCTTGCCTTGATCCGGCTACACTTGGAGGTGACTaGTTCTTGGACGGCTTCAAATGGACTCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: GACLDPATLGGD*FLDGFKWTHLL
Trigger: CAACAGATGAGTCCATTTGAAGCCGTCCAAGAACAAGTCACCTCCAAGTGTAGCCGGATCAAGGCAAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 72 bp GCATGCTGTTCCAAAATGTCGTCGATCAGCCTCAAGTaGCACACCCAGTCTTCATCTGGGCTCACACAGGAG +
Preference number: 4 (lower is better)
Translates to: ACCSKMSSISLK*HTQSSSGLTQE
Trigger: CTCCTGTGTGAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGACGACATTTTGGAACAGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
3UTR CAA 72 bp TGCTCAGATTTAAAGTGCCCCAGCATCCTGGGTGACTaGCCCAGAATTCTGGGCTGTGGCATTTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSDLKCPSILGD*PRILGCGILSS
Trigger: GCTGCTCAAAATGCCACAGCCCAGAATTCTGGGCAAGTCACCCAGGATGCTGGGGCACTTTAAATCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262858.7
ENST00000370401.6
ENST00000426613.4
CDS-3UTR TCA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGCAGCCGGCACGCTGTTaGTTTTCTCATAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWQPARC*FSHSKE
Trigger: TTCCTTACTATGAGAAAATCAACAGCGTGCCGGCTG...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp AACTGCGGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTGCTGCAGAAGGAATaGAGAATGGTCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NCGYGSTPLPRVMSPWGFLLQKE*RMVRLL
Trigger: CAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCAG...AAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCCGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGCACTTAACGATAAAGAGAGCCTCGGAGAGTaGTACCCGACAAGGTATTGG +
Preference number: 4 (lower is better)
Translates to: ENSPSLLVKCLCGALNDKESLGE*YPTRYW
Trigger: CCAATACCTTGTCGGGTAGCACTCTCCGAGGCTCTC...TTTATCGTTAAGTGCCCCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGGACATGCCAGTAACTTaGCTGCAACTAGAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGDMPVT*LQLEAN
Trigger: GTTTGCTTCTAGTTGCAGCCAAGTTACTGGCATGTC...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGCACTTAACGATAAACAAGTGCTTGCTAGATaGGGGGCTTGCCTTGATCCG +
Preference number: 4 (lower is better)
Translates to: ENSPSLLVKCLCGALNDKQVLAR*GACLDP
Trigger: CGGATCAAGGCAAGCCCCCCATCTAGCAAGCACTTG...TTTATCGTTAAGTGCCCCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATTGGTACTACAAATGGTaGGCCCATGATGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNWYYKW*AHDVAI
Trigger: AATGGCAACATCATGGGCTCACCATTTGTAGTACCA...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp AACTGCGGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTGACATCAGGTGTCCTTaGGGGGTTTTGATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: NCGYGSTPLPRVMSPWGFDIRCP*GVLMVE
Trigger: CTCTACCATCAAAACCCCTCAAGGACACCTGATGTC...AAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCCGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp AACTGCGGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTGCTCAGGGTTTTGGATaGGTTGCTGCTTATGGGCTT +
Preference number: 4 (lower is better)
Translates to: NCGYGSTPLPRVMSPWGFAQGFG*VAAYGL
Trigger: AAGCCCATAAGCAGCAACTCATCCAAAACCCTGAGC...AAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCCGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGAGAAAGTCTGGACACTaGGAAAAGTTTACAGGACAG +
Preference number: 4 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGRKSGH*EKFTGQ
Trigger: CTGTCCTGTAAACTTTTCTCAGTGTCCAGACTTTCT...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTCCAGGGCAGCATTGCTaGTGGACGTCATGCTTGACA +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLPGQHC*WTSCLT
Trigger: TGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGG...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCGCAAACAACACGGTCTaGATATTTGTAACATTGTAT +
Preference number: 4 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSANNTV*IFVTLY
Trigger: ATACAATGTTACAAATATGCAGACCGTGTTGTTTGC...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGTTAACCCCACGAGGGTaGACACAAGCTGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWLTPRG*TQAGLF
Trigger: AAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAA...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGAGACACAGGGCGTGCTaGAGAGCTCCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLRHRAC*RAPAAA
Trigger: CGCCGCCGCCGGAGCTCTGCAGCACGCCCTGTGTCT...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCGAGCGACAGGGAGCATaGCCTGGACCTGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVERQGA*PGPGSW
Trigger: CCAAGAGCCAGGTCCAGGCCATGCTCCCTGTCGCTC...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCGCAGACCAGACCAACTaGGGGTGGGCCCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVADQTN*GWALAA
Trigger: AGCAGCAAGGGCCCACCCCCAGTTGGTCTGGTCTGC...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTGCACTTCTGGTGGGGTaGCCTTGGGACTCTGCATAT +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLALLVG*PWDSAY
Trigger: ATATGCAGAGTCCCAAGGCCACCCCACCAGAAGTGC...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTAAGGCTTGGGAGTTGTaGTTAGGGTTGCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLKAWEL*LGLPGD
Trigger: ATCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTT...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAATGGAGCAGGGAAGGCTaGCTAGAGGTGGTAGGCATG +
Preference number: 4 (lower is better)
Translates to: SAVKLIRKELAETERFAKWSREG*LEVVGM
Trigger: CATGCCTACCACCTCTAGGCAGCCTTCCCTGCTCCA...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTGTAACGGGAGACAACTaGGGGTATGGATCGACACCA +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLVTGDN*GYGSTP
Trigger: TGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTAC...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTGTTGCCAAAAGTAAATaGCTCCGTGGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLVAKSK*LRGSWA
Trigger: AGCCCAGGAGCCACGGAGCCATTTACTTTTGGCAAC...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp AACTGCGGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCCATGGGGGTTTCTATaGGCATCCTGCTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: NCGYGSTPLPRVMSPWGFPWGFL*ASCSDL
Trigger: TAAATCTGAGCAGGATGCCCATAGAAACCCCCATGG...AAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCCGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATCGGCCAAGTTCATGCTaGCGGCGCTGCAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHRPSSC*RRCSGG
Trigger: GCCGCCACTGCAGCGCCGCCAGCATGAACTTGGCCG...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCGGCCCATTGCAAGGGTaGCATCTTCAAGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVGPLQG*HLQGKA
Trigger: GGCCTTGCCTTGAAGATGTCACCCTTGCAATGGGCC...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTTGCTGCTGGACGTCATaGTTGACAGTAAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLCCWTS*LTVRHW
Trigger: CCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCA...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAGAGCCCCAGGGCAGCATTaGTGCTGGACGTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: CTRSLKNHQLSILSQVERAPGQH*CWTSCL
Trigger: CAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGC...TCTCTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGGGGACGGCCCAGGGTTaGTGGCAGGCAGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLGTAQG*WQAEQT
Trigger: TGTCTGCTCTGCCTGCCAGCAACCCTGGGCCGTCCC...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAAGTGGCCTTGGGACTCTaGATATGCTGGCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: SAVKLIRKELAETERFAKVALGL*ICWQTE
Trigger: CTCTGTCTGCCAGCATATGCAGAGTCCCAAGGCCAC...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGCCCTGTACCGGGCTCTaGCTGAGGCTCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQPCTGL*LRLWLP
Trigger: GGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGG...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTCGATCAGCCTCAAGTTaGACACCCAGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLRSASS*TPSLHL
Trigger: CAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCG...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGCCTAGACACAGGGCGTaGTGCAGAGCTCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQPRHRA*CRAPAA
Trigger: CGCCGCCGGAGCTCTGCAGCACGCCCTGTGTCTAGG...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTCCCATCAGCCATGTCTaGAAACTGGAAGTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLPISHV*KLEVVF
Trigger: GAAGACCACTTCCAGTTTCCAGACATGGCTGATGGG...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCCTGCTGTGGCAAGCCTaGGCTAGAGAGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVLLWQA*ARELLW
Trigger: CCAGAGAAGCTCTCTAGCCCAGGCTTGCCACAGCAG...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp AACTGCGGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTTCATGCTCAGGGTTTTaGATGAGTTGCTGCTTATGG +
Preference number: 4 (lower is better)
Translates to: NCGYGSTPLPRVMSPWGFSCSGF*MSCCLW
Trigger: CCATAAGCAGCAACTCATCCAAAACCCTGAGCATGA...AAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCCGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGTGGCTCCGTGGCTCCTaGGCTGGAGCTTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLWLRGS*AGACHP
Trigger: GGGATGGCAAGCTCCAGCCCAGGAGCCACGGAGCCA...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGTTGCAGATCACCCCCTaGCTAGCGGCCGGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQLQITP*LAAGAP
Trigger: GGGGGCACCGGCCGCTAGCCAGGGGGTGATCTGCAA...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATCCCCAGCATCCTGGGTaGCTTGCCCAGAATTCTGGG +
Preference number: 4 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHPQHPG*LAQNSG
Trigger: CCCAGAATTCTGGGCAAGTCACCCAGGATGCTGGGG...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATGGGGTGGGCCCTTGCTaGTTTGTAGCAGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHGVGPC*FVADPC
Trigger: GCAGGGGTCTGCTACAAAGCAGCAAGGGCCCACCCC...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTGGGGGTGGGCCCTTaGTGCTTTGTAGCAGACCCC +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLLGVGP*CFVADP
Trigger: GGGGTCTGCTACAAAGCAGCAAGGGCCCACCCCCAG...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAATGCTGCTGCTGCAGCTaGAAGGTGGCAGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: CQLAQQLLVISTLLIALKCCCCS*KVAVAV
Trigger: CACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCA...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGCAGGAGCATAGGGCATaGCGGGCCCCAGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQQEHRA*RAPGQH
Trigger: ATGCTGCCCTGGGGCCCGCCATGCCCTATGCTCCTG...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCGATCAGGGAACACTGTaGGGTGAAGGACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVDQGTL*GEGLLW
Trigger: CCACAGCAGTCCTTCACCCCACAGTGTTCCCTGATC...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAAGGCCGTCTGAGCTGGTaGGGACTCAAGGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: CQLAQQLLVISTLLIALKGRLSW*GLKDWV
Trigger: CACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCC...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGTCCCCGAAACTGCTGTaGTCACAGCTGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: ICTRSLKNHQLSILSQVESPKLL*SQLLPL
Trigger: CAGCGGCAGCAGCTGTGACCACAGCAGTTTCGGGGA...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAGACCATCCCCTGCTGCATaGTCATGCTCAGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: CTRSLKNHQLSILSQVERPSPAA*SCSGFW
Trigger: CCAAAACCCTGAGCATGATCATGCAGCAGGGGATGG...TCTCTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCCACCACTTCCTAGAGTaGTGTCACCATGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVHHFLE*CHHGGF
Trigger: GAAACCCCCATGGTGACATCACTCTAGGAAGTGGTG...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGTTTGTAGCAGACCCCTaGTTGCTGGCTGCCAACGCC +
Preference number: 4 (lower is better)
Translates to: ICTRSLKNHQLSILSQVEFVADP*LLAANA
Trigger: GGCGTTGGCAGCCAGCAAGCAGGGGTCTGCTACAAA...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGTCCTGGGCTGGAGCTTaGCATCCCCTGCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: ICTRSLKNHQLSILSQVESWAGA*HPLLHD
Trigger: ATCATGCAGCAGGGGATGGCAAGCTCCAGCCCAGGA...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATTGCTGCTGCTGCTGCTaGAGCTGCAAGGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYCCCCC*SCKVAV
Trigger: CACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCA...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTGGTTGCTGCATCATCTaGTGCAGAAGGAATGAAGAA +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLGCCII*CRRNEE
Trigger: TTCTTCATTCCTTCTGCAGCAGATGATGCAGCAACC...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGGTGAGATCACTCCCATaGCCTCGCAGCTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLVRSLP*PRSSGA
Trigger: GGCACCAGAGCTGCGAGGGCATGGGAGTGATCTCAC...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCCTCACACACTGTCTCTaGGCCTCTCCCAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVLTHCL*ASPKSG
Trigger: TCCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAG...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAGATCCAGCAGTAATGACTaGCCAGCCACTCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: CTRSLKNHQLSILSQVERSSSND*PATPIA
Trigger: GGCTATGGGAGTGGCTGGCCAGTCATTACTGCTGGA...TCTCTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAAAAGCAAACTCCTTGCTaGAAGCCAGGCTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SAVKLIRKELAETERFAKKQTPC*KPGSPS
Trigger: ACTTGGAGAGCCTGGCTTCCAGCAAGGAGTTTGCTT...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATCACTGGGCGGTAAGGTaGAGAGAGTCCTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHHWAVR*RESWRR
Trigger: CCTCCTCCAGGACTCTCTCCACCTTACCGCCCAGTG...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAGAGCTGGAGGAACTTGGTaGTGTTTGCTACAGGCACCG +
Preference number: 4 (lower is better)
Translates to: CTRSLKNHQLSILSQVERAGGTW*CLLQAP
Trigger: CGGTGCCTGTAGCAAACACCACCAAGTTCCTCCAGC...TCTCTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTACAGGACAGTGGGTGTaGGTTTTCTATAACAGACAC +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLTGQWV*VFYNRH
Trigger: GTGTCTGTTATAGAAAACCCACACCCACTGTCCTGT...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCGGATGGGATCTGAAGTaGCATGCCAGTAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVGWDLK*HASNLA
Trigger: AGCCAAGTTACTGGCATGTCACTTCAGATCCCATCC...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATAGCTCTGGTGCCTGGTaGGTGGGATCATTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYSSGAW*VGSFLD
Trigger: GTCCAGGAATGATCCCACTCACCAGGCACCAGAGCT...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCGAAGGTGAGTGCTGCTaGACGCTATTATCCACTTGG +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVEGECC*TLLSTW
Trigger: CCAAGTGGATAATAGCGTTCAGCAGCACTCACCTTC...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TCACACAAGGCAATAGGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTCTCCAGGTGGATTGCTaGGACAGGGCTCGGCTCACA +
Preference number: 4 (lower is better)
Translates to: SHKAIGFLVNIEINGQVVLQVDC*DRARLT
Trigger: TGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGAG...AACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCCTATTGCCTTGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGTGGGGTGAAGGACTaGTGTGGCAAGCCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHCGVKD*CGKPGL
Trigger: TAGCCCAGGCTTGCCACAGCAGTCCTTCACCCCACA...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATGAGCTTGCCATCCCCTaGTGCATGATCATGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHELAIP*CMIMLR
Trigger: CCTGAGCATGATCATGCAGCAGGGGATGGCAAGCTC...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGTGCTGTTGCTGCTGCTaGTGCTGCAGCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLCCCCC*CCSCKV
Trigger: CACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCA...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAAGAGATATATGCATTCTaGCGTTCAGGGGTCATTGCC +
Preference number: 4 (lower is better)
Translates to: SAVKLIRKELAETERFAKEIYAF*RSGVIA
Trigger: GGCAATGACCCCTGAACGGCAGAATGCATATATCTC...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATGCATCCTGGGTGACTTaGCCAGAATTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHASWVT*PEFWAV
Trigger: CACAGCCCAGAATTCTGGGCAAGTCACCCAGGATGC...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCCCCACCATGGCGAAATaGGGAAGCATGCTCTTGATT +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVPTMAK*GSMLLI
Trigger: AATCAAGAGCATGCTTCCCCATTTCGCCATGGTGGG...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAACATAGTAAGGAACAGTaGGCCCTTTCAGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: SAVKLIRKELAETERFAKHSKEQ*ALSVPL
Trigger: AAGTGGGACTGAAAGGGCCCACTGTTCCTTACTATG...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGATGCCCTCGCAGCTCTaGTGCCTGGTGAGTGGGATC +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQMPSQL*CLVSGI
Trigger: GATCCCACTCACCAGGCACCAGAGCTGCGAGGGCAT...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGCTGAGTGTGAGAGGATaGGACACTGGGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQLSVRG*DTGGWR
Trigger: CCTCCAGCCCCCAGTGTCCCATCCTCTCACACTCAG...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCGCAGTGGGCATTCTTaGCACACTAGGCCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLRSGHS*HTRPSE
Trigger: CTCAGACGGCCTAGTGTGCCAAGAATGCCCACTGCG...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAACAAGCAGTACTAGGATaGGCACCTGGGCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: CQLAQQLLVISTLLIALKQAVLG*APGPIA
Trigger: TGCAATGGGCCCAGGTGCTCATCCTAGTACTGCTTG...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAGAGAGGAGGATGGGATCTaGAGTGACATGCCAGTAACT +
Preference number: 4 (lower is better)
Translates to: CTRSLKNHQLSILSQVEREEDGI*SDMPVT
Trigger: AGTTACTGGCATGTCACTTCAGATCCCATCCTCCTC...TCTCTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TCACACAAGGCAATAGGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTCTTCCCCAGAGTTGGTaGGATCACTCCCATGCCCTC +
Preference number: 4 (lower is better)
Translates to: SHKAIGFLVNIEINGQVVLPQSW*DHSHAL
Trigger: GAGGGCATGGGAGTGATCTCACCAACTCTGGGGAAG...AACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCCTATTGCCTTGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGCCCATGCAGCATTGTTaGACGCAGTGGGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: ICTRSLKNHQLSILSQVEPMQHC*TQWAFL
Trigger: CAAGAATGCCCACTGCGTTCAACAATGCTGCATGGG...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCTGCTGCTGCTGCTGTTaGTGGCTTAGAAGATTACTG +
Preference number: 4 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVCCCCC*WLRRLL
Trigger: CAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCA...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGTGCTGCTGCTGCTGCTaGTGTTGCTGGCTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: ICTRSLKNHQLSILSQVECCCCC*CCWLRR
Trigger: TCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCA...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGAATGGTCAGGCTGCTaGTGCTGTTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQEWSGC*CCCCCC
Trigger: GCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTC...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp AACACCACTCAAATTGTAACGGGAGACAACTGCGGGTATGGATCGACACCACTTTGGCATTTGTCAACTTaGACAACAACTCTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: NTTQIVTGDNCGYGSTPLWHLST*TTTLGH
Trigger: ATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCA...AAGTGGTGTCGATCCATACCCGCAGTTGTCTCCCGTTACAATTTGAGTGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGGATCTCTGTTCCTCTTaGTGTCTGGGCAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLDLCSS*CLGRAG
Trigger: GCCTGCTCTGCCCAGACAGCAAGAGGAACAGAGATC...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGTTGACAGTAAGGCATTaGGAGAGCCTCGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ICTRSLKNHQLSILSQVELTVRH*ESLGEC
Trigger: GCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAA...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAGAAAGCCCAGTTCTGGGTaGCATCAAGTGCTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: CTRSLKNHQLSILSQVERKPSSG*HQVLAR
Trigger: TCTAGCAAGCACTTGATGCCACCCAGAACTGGGCTT...TCTCTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATAGCCACATAGCTTGGTaGCTCGATGCCCTGTATGGG +
Preference number: 4 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYSHIAW*LDALYG
Trigger: CCCATACAGGGCATCGAGCCACCAAGCTATGTGGCT...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATAGGGTGCACACAAGCTaGGCTTTTTCTCTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHRVHTS*AFSLGL
Trigger: CAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCT...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATAGGGTTGCCTGGGGATaGTCTAAAACCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHRVAWG*SKTSGS
Trigger: AGAGCCACTGGTTTTAGATCATCCCCAGGCAACCCT...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCAGGCTCTCCAAGTGTaGCATCTGAACCGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYQALQV*HLNRRL
Trigger: AAGCCTTCGGTTCAGATGTCACACTTGGAGAGCCTG...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAAGGAATCGAATAGCTaGTCCCTGTGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: ICTRSLKNHQLSILSQVEKESNS*SLWRRM
Trigger: CATCCTCCTCCACAGGGATCAGCTATTCGATTCCTT...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAACTTGCCATCCCCTGCTaGATGATCATGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: CQLAQQLLVISTLLIALKLAIPC*MIMLRV
Trigger: AACCCTGAGCATGATCATGCAGCAGGGGATGGCAAG...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATAAACGCTGGGGTTGCTaGATCATCTGCTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHKRWGC*IICCRR
Trigger: CCTTCTGCAGCAGATGATGCAGCAACCCCAGCGTTT...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAACCTGCTGGAGGAACTTaGTGGTGTTTGCTACAGGCA +
Preference number: 4 (lower is better)
Translates to: CQLAQQLLVISTLLIALKPAGGT*WCLLQA
Trigger: TGCCTGTAGCAAACACCACCAAGTTCCTCCAGCAGG...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTGGCCATACCCTGCTaGAGGAACTTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLLAIPC*RNLVVF
Trigger: AAACACCACCAAGTTCCTCCAGCAGGGTATGGCCAG...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATCAAAAAGTCGGCAGGTaGCAGCTCAGGGGGAATATC +
Preference number: 4 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHQKVGR*QLRGNI
Trigger: GATATTCCCCCTGAGCTGCCACCTGCCGACTTTTTG...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGTCATTTAGTGGGGGTTaGGGCTGGCGCAAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLSFSGG*GWRKKS
Trigger: CGACTTTTTGCGCCAGCCCCAACCCCCACTAAATGA...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGTCTAGCTCCTCCAGGTaGATTGCTGAGACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQSSSSR*IAETGL
Trigger: GAGCCCTGTCTCAGCAATCCACCTGGAGGAGCTAGA...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGGGTCTTGAATTTTGGTaGGCTCCTCTAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ICTRSLKNHQLSILSQVEGLEFW*APLAAL
Trigger: AAGAGCTGCTAGAGGAGCTCACCAAAATTCAAGACC...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATCATTGCCATAAGACCTaGTCTCTGTTCCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHHCHKT*SLFLLL
Trigger: CAGCAAGAGGAACAGAGATCAGGTCTTATGGCAATG...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGCTTTTTCTCTCGGTCTaGATGGTAAAGGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ICTRSLKNHQLSILSQVELFLSV*MVKGGG
Trigger: TCCTCCTCCCTTTACCATTCAGACCGAGAGAAAAAG...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATAGGGACCTGCAGTTCTaGACAAGCAGTACTAGGATG +
Preference number: 4 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYRDLQF*TSSTRM
Trigger: CATCCTAGTACTGCTTGTGCAGAACTGCAGGTCCCT...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATGTCAATGGAGGGACCTaGAGTTCTGCACAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHVNGGT*SSAQAV
Trigger: TACTGCTTGTGCAGAACTGCAGGTCCCTCCATTGAC...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATATTCCTGGAGCTTTCTaGGCTCCTGACGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHIPGAF*APDDFP
Trigger: TGGGAAATCGTCAGGAGCCCAGAAAGCTCCAGGAAT...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGAGAGGATGGGACACTaGGGGCTGGAGGTGAAAATT +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQERMGH*GLEVKI
Trigger: AATTTTCACCTCCAGCCCCCAGTGTCCCATCCTCTC...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGAGAGTGATGTCACCATaGGGGTTTCTATGGGCATCC +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLRVMSP*GFLWAS
Trigger: GGATGCCCATAGAAACCCCCATGGTGACATCACTCT...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAAAGAGCTAGCGGAGACTaGAAGGTTCGCAAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: CQLAQQLLVISTLLIALKRASGD*KVRKRD
Trigger: ATCTCTTTTGCGAACCTTTCAGTCTCCGCTAGCTCT...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTGTTGGGAGATATATaGATTCTGCCGTTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLLLGDI*ILPFRG
Trigger: ACCCCTGAACGGCAGAATGCATATATCTCCCAACAG...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TCTGCTGTAAAGCTCATTAGGAAAGAGCTAGCGGAGACTGAAAGGTTCGCAAAAATCCACATTGCTCATTaGATTAAAACCATAAGCGAC +
Preference number: 4 (lower is better)
Translates to: SAVKLIRKELAETERFAKIHIAH*IKTISD
Trigger: GTCGCTTATGGTTTTAATGCAATGAGCAATGTGGAT...TTTTGCGAACCTTTCAGTCTCCGCTAGCTCTTTCCTAATGAGCTTTACAGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATTGCTGCTGCTGTTGCTaGCTTAGAAGATTACTGGTG +
Preference number: 4 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYCCCCC*LRRLLV
Trigger: CACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCA...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGGACTCTGCATATGCTaGCAGACAGAGTCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FQICTRSLKNHQLSILSQGLCIC*QTESSL
Trigger: CAGACTTGACTCTGTCTGCCAGCATATGCAGAGTCC...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCAGAATTCTGGGCTGTaGCATTTTGAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FLFGICQLAQQLLVISTLQNSGL*HFEQQH
Trigger: ATGCTGCTGCTCAAAATGCCACAGCCCAGAATTCTG...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp TCACACAAGGCAATAGGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTTTGGGACTCTGCATATaGTGGCAGACAGAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: SHKAIGFLVNIEINGQVVLGLCI*WQTESS
Trigger: ACTTGACTCTGTCTGCCAGCATATGCAGAGTCCCAA...AACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCCTATTGCCTTGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR GCA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATTTTCTATGGGCATCCTaGTCAGATTTAAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYFLWAS*SDLKCP
Trigger: GGGGCACTTTAAATCTGAGCAGGATGCCCATAGAAA...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATACACTATCTGCTTACTaGTGGAAGGAATCGAATAGC +
Preference number: 4 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHTLSAY*WKESNS
Trigger: GCTATTCGATTCCTTCCACCAGTAAGCAGATAGTGT...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAAGAGTGGGATCATTCCTaGACTCAGATTGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CQLAQQLLVISTLLIALKEWDHS*TQIVLK
Trigger: CTTCAGAACAATCTGAGTCCAGGAATGATCCCACTC...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp TCACACAAGGCAATAGGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTAGGATTTATTGTCAATaGAGGGACCTGCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SHKAIGFLVNIEINGQVVRIYCQ*RDLQFC
Trigger: GCAGAACTGCAGGTCCCTCCATTGACAATAAATCCT...AACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCCTATTGCCTTGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CCA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTTGCACAACAACTCTTaGTCATATCCACATTGCTCA +
Preference number: 4 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHLHNNS*SYPHCS
Trigger: TGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAA...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAATCAAGAGAGCTTCAATaGAATCTACCTCATTGCAGT +
Preference number: 4 (lower is better)
Translates to: CQLAQQLLVISTLLIALKSRELQ*NLPHCS
Trigger: ACTGCAATGAGGTAGATTTCATTGAAGCTCTCTTGA...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAAGTGGCAATTAAAATGTaGTTACAGAAAGTCTGGACA +
Preference number: 4 (lower is better)
Translates to: CQLAQQLLVISTLLIALKVAIKM*LQKVWT
Trigger: TGTCCAGACTTTCTGTAATCACATTTTAATTGCCAC...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR TCA 90 bp TCACACAAGGCAATAGGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTCAGTCATCCATTGTTTaGCCTGCAAATTTATTCTTG +
Preference number: 4 (lower is better)
Translates to: SHKAIGFLVNIEINGQVVQSSIV*PANLFL
Trigger: CAAGAATAAATTTGCAGGTCAAACAATGGATGACTG...AACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCCTATTGCCTTGTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS GCA 90 bp AAGGAACCCAGCCCTGTTGCAGATCACCCCCTGGCTAGCGGCCGGTaGCCCCGCGCCCGCCCGCCGCCGGCCGCTTCAGCTCGCGGCCAA +
Preference number: 5 (lower is better)
Translates to: KEPSPVADHPLASGR*PRARPPPAASARGQ
Trigger: TTGGCCGCGAGCTGAAGCGGCCGGCGGCGGGCGGGCGCGGGGGCACCGGCCGCTAGCCAGGGGGTGATCTGCAACAGGGCTGGGTTCCTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370401.7
ENST00000432680.7
ENST00000683696.1
CDS GCA 90 bp CCGCGCCCGCCCGCCGCCGGCCGCTTCAGCTCGCGGCCAAGTTCATaGTGGCGGCGCTGCAGTGGCGGCCTCAATCTGCTCGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: PRPPAAGRFSSRPSS*WRRCSGGLNLLAPF
Trigger: GAATGGAGCGAGCAGATTGAGGCCGCCACTGCAGCGCCGCCAGCATGAACTTGGCCGCGAGCTGAAGCGGCCGGCGGCGGGCGGGCGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683696.1
CDS TCA 90 bp AGCGCCAGTCCCTCCGCCCACGCATCCGCTCACCAGCTCGCGCCCTaGCTGCCAAACAGACCCGCTGTGGCGGCAGCGGGGACCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SASPSAHASAHQLAP*LPNRPAVAAAGTRA
Trigger: AGCCCTGGTCCCCGCTGCCGCCACAGCGGGTCTGTTTGGCAGTCAGGGCGCGAGCTGGTGAGCGGATGCGTGGGCGGAGGGACTGGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426613.5
ENST00000683453.1
CDS GCA 90 bp GCCGCCGGCCGCTTCAGCTCGCGGCCAAGTTCATGCTGGCGGCGCTaGAGTGGCGGCCTCAATCTGCTCGCTCCATTCCCACCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: AAGRFSSRPSSCWRR*SGGLNLLAPFPPPG
Trigger: GCCGGGCGGTGGGAATGGAGCGAGCAGATTGAGGCCGCCACTGCAGCGCCGCCAGCATGAACTTGGCCGCGAGCTGAAGCGGCCGGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683696.1
CDS CCA 90 bp CGCCCGCCCGCCGCCGGCCGCTTCAGCTCGCGGCCAAGTTCATGCTaGCGGCGCTGCAGTGGCGGCCTCAATCTGCTCGCTCCATTCCCA +
Preference number: 5 (lower is better)
Translates to: RPPAAGRFSSRPSSC*RRCSGGLNLLAPFP
Trigger: TGGGAATGGAGCGAGCAGATTGAGGCCGCCACTGCAGCGCCGCCAGCATGAACTTGGCCGCGAGCTGAAGCGGCCGGCGGCGGGCGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683696.1
CDS GCA 90 bp CCAGTCCCTCCGCCCACGCATCCGCTCACCAGCTCGCGCCCTGACTaGCAAACAGACCCGCTGTGGCGGCAGCGGGGACCAGGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: PVPPPTHPLTSSRPD*QTDPLWRQRGPGLS
Trigger: TGAGAGCCCTGGTCCCCGCTGCCGCCACAGCGGGTCTGTTTGGCAGTCAGGGCGCGAGCTGGTGAGCGGATGCGTGGGCGGAGGGACTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426613.5
ENST00000683453.1
CDS CCA 90 bp CGGCCGCTTCAGCTCGCGGCCAAGTTCATGCTGGCGGCGCTGCAGTaGCGGCCTCAATCTGCTCGCTCCATTCCCACCGCCCGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RPLQLAAKFMLAALQ*RPQSARSIPTARLR
Trigger: GCGGAGCCGGGCGGTGGGAATGGAGCGAGCAGATTGAGGCCGCCACTGCAGCGCCGCCAGCATGAACTTGGCCGCGAGCTGAAGCGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683696.1
CDS CCA 90 bp ACATCTGGTCACGCTCAGCGGAGCCGCAGGCCACGAATAAAGGGGTaGGCCCGCCGCCCACTAGGCCCCTCCTTCCCTCCACGCCCACGC +
Preference number: 5 (lower is better)
Translates to: TSGHAQRSRRPRIKG*ARRPLGPSFPPRPR
Trigger: GCGTGGGCGTGGAGGGAAGGAGGGGCCTAGTGGGCGGCGGGCCCACCCCTTTATTCGTGGCCTGCGGCTCCGCTGAGCGTGACCAGATGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468306.1
CDS GCA 90 bp CCTCTTGCTGTGGCGTCGCAGCTAGGCAGTAGTGGAGCGGGCACCTaGCTCCAGGCCTTCGGATCCCAGCTGCCCCAGGGCGCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: PLAVASQLGSSGAGT*LQAFGSQLPQGAAS
Trigger: AGAGGCAGCGCCCTGGGGCAGCTGGGATCCGAAGGCCTGGAGGCAGGTGCCCGCTCCACTACTGCCTAGCTGCGACGCCACAGCAAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp CGATGGCAGCTGCAGGGGCTGAGCACAACCCGGGAACGCCGCGTCTaGTCCGACAGCAGCAGCGCTCAGCTCCTGTCCGCACCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: RWQLQGLSTTRERRV*SDSSSAQLLSAPLS
Trigger: ACTCAGAGGTGCGGACAGGAGCTGAGCGCTGCTGCTGTCGGAGCAGACGCGGCGTTCCCGGGTTGTGCTCAGCCCCTGCAGCTGCCATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262858.8
ENST00000468306.1
CDS GCA 90 bp CCGCACTCAGTGGAGGGTGGTCTGTGCCCCCGGCGTCAGCTGGCTTaGCTAGGCGGTGCGCTGGTGGAAAGAGGCGACAGCAGGGTTAGC +
Preference number: 5 (lower is better)
Translates to: PHSVEGGLCPRRQLA*LGGALVERGDSRVS
Trigger: GCTAACCCTGCTGTCGCCTCTTTCCACCAGCGCACCGCCTAGGCAAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCACTGAGTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS TCA 90 bp CTGCTGCAGCTGCAAGGTGGCAGTGGCCGTGGAGGAGGCAGTGGCTaGGGAGGCCTGCGTTGGTGTCGGCTGCTGCAGGTAGTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LLQLQGGSGRGGGSG*GGLRWCRLLQVVEQ
Trigger: CTGCTCCACTACCTGCAGCAGCCGACACCAACGCAGGCCTCCTCAGCCACTGCCTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp AACGACCTAGACACAGGGCTTGGCTGCTCCGCACTCAGTGGAGGGTaGTCTGTGCCCCCGGCGTCAGCTGGCTTGCCTAGGCGGTGCGCT +
Preference number: 5 (lower is better)
Translates to: NDLDTGLGCSALSGG*SVPPASAGLPRRCA
Trigger: AGCGCACCGCCTAGGCAAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCACTGAGTGCGGAGCAGCCAAGCCCTGTGTCTAGGTCGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262858.8
ENST00000426613.5
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
CDS CCA 90 bp GCTGTTGCTGCTGCTGCTGCTGCAGCTGCAAGGTGGCAGTGGCCGTaGAGGAGGCAGTGGCTGAGGAGGCCTGCGTTGGTGTCGGCTGCT +
Preference number: 5 (lower is better)
Translates to: AVAAAAAAAARWQWP*RRQWLRRPALVSAA
Trigger: AGCAGCCGACACCAACGCAGGCCTCCTCAGCCACTGCCTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 90 bp GAATGGGGGTGGTGGTGGTGGCAGTGGCAGCGGTGGTGGGTGTGGTaGTGGCACTGGGCGGTAAGGTGGAGAGAGTCCTGGAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: EWGWWWWQWQRWWVW*WHWAVRWRESWRRQ
Trigger: CTGCCTCCTCCAGGACTCTCTCCACCTTACCGCCCAGTGCCATCACCACACCCACCACCGCTGCCACTGCCACCACCACCACCCCCATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 90 bp CTGCCTCCAGGCCTTCGGATCCCAGCTGCCCCAGGGCGCTGCCTCTaGGGTGCTGTACGAGGAGGTGACTCGGGCCAGCTCATGAGCAAA +
Preference number: 5 (lower is better)
Translates to: LPPGLRIPAAPGRCL*GAVRGGDSGQLMSK
Trigger: TTTGCTCATGAGCTGGCCCGAGTCACCTCCTCGTACAGCACCTCAGAGGCAGCGCCCTGGGGCAGCTGGGATCCGAAGGCCTGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 90 bp CGCACGCCGAAGGTAGACTTTCCGCGTCTGGGGAAAACGAGCTGGTaGGCCGTGCGTGGCCGGGACACACGAAGAGCGAGCACGGAGAGC +
Preference number: 5 (lower is better)
Translates to: RTPKVDFPRLGKTSW*AVRGRDTRRASTES
Trigger: GCTCTCCGTGCTCGCTCTTCGTGTGTCCCGGCCACGCACGGCTCACCAGCTCGTTTTCCCCAGACGCGGAAAGTCTACCTTCGGCGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS GCA 90 bp GGGGGTGGGCCCTTGCTGCTTTGTAGCAGACCCCTGCTTGCTGGCTaGCAACGCCTTCAGCTGGTGGGCGTGATGCCACTGAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: GGGPLLLCSRPLLAG*QRLQLVGVMPLRHW
Trigger: CCAGTGCCTCAGTGGCATCACGCCCACCAGCTGAAGGCGTTGGCAGCCAGCAAGCAGGGGTCTGCTACAAAGCAGCAAGGGCCCACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp GCCCACGGAGTCTCGCTGATTGCTAGCACAGCAGTCAGATCAAACTaGAAGGCAGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCC +
Preference number: 5 (lower is better)
Translates to: AHGVSLIASTAVRSN*KAAARLGEGRPPLP
Trigger: GGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCTGCCTTGCAGTTTGATCTGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358892.7
CDS CCA 90 bp CCAAACAGACCCGCTGTGGCGGCAGCGGGGACCAGGGCTCTCAGGTaGCAGTTAGTGAACTGCATTCTCTCCATCCCGGCCGAGTGCCCC +
Preference number: 5 (lower is better)
Translates to: PNRPAVAAAGTRALR*QLVNCILSIPAECP
Trigger: GGGGCACTCGGCCGGGATGGAGAGAATGCAGTTCACTAACTGCCACCTGAGAGCCCTGGTCCCCGCTGCCGCCACAGCGGGTCTGTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426613.5
ENST00000683453.1
CDS GCA 90 bp TTAACAGTTCCCTTGGCTGCTCCGCACTCAGTGGAGGGTGGTCTGTaGCCCCGGCGTCAGCTGGCTTGCCTAGGCGGTGCGCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: LTVPLAAPHSVEGGL*PRRQLACLGGALDF
Trigger: GAAGTCCAGCGCACCGCCTAGGCAAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCACTGAGTGCGGAGCAGCCAAGGGAACTGTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468306.1
CDS CCA 90 bp CTGCTGTGGCAAGCCTGGGCTAGAGAGCTTCTCTGGGCGATAGGGTaGGGACGGCCCAGGGTTGCTGGCAGGCAGAGCAGACATCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLWQAWARELLWAIG*GRPRVAGRQSRHQV
Trigger: CACCTGATGTCTGCTCTGCCTGCCAGCAACCCTGGGCCGTCCCCACCCTATCGCCCAGAGAAGCTCTCTAGCCCAGGCTTGCCACAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp TCTCCTCTTAACAGTTCCCTTGGCTGCTCCGCACTCAGTGGAGGGTaGTCTGTGCCCCCGGCGTCAGCTGGCTTGCCTAGGCGGTGCGCT +
Preference number: 5 (lower is better)
Translates to: SPLNSSLGCSALSGG*SVPPASAGLPRRCA
Trigger: AGCGCACCGCCTAGGCAAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCACTGAGTGCGGAGCAGCCAAGGGAACTGTTAAGAGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468306.1
CDS CCA 90 bp TCGGATCAGGGAACACTGTGGGGTGAAGGACTGCTGTGGCAAGCCTaGGCTAGAGAGCTTCTCTGGGCGATAGGGTGGGGACGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SDQGTLWGEGLLWQA*ARELLWAIGWGRPR
Trigger: CCTGGGCCGTCCCCACCCTATCGCCCAGAGAAGCTCTCTAGCCCAGGCTTGCCACAGCAGTCCTTCACCCCACAGTGTTCCCTGATCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 90 bp GGTTGGCAAGAATGGAGCTCTGAGGGCCGAACTGCGGCTGTTGAGTaGGAGCAGGGCTGGGGAGCTTCTCAGGAGCATAGGGCATGGCGG +
Preference number: 5 (lower is better)
Translates to: GWQEWSSEGRTAAVE*EQGWGASQEHRAWR
Trigger: CCGCCATGCCCTATGCTCCTGAGAAGCTCCCCAGCCCTGCTCTCACTCAACAGCCGCAGTTCGGCCCTCAGAGCTCCATTCTTGCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 90 bp GCGTCTGCTCCGACAGCAGCAGCGCTCAGCTCCTGTCCGCACCTCTaGGTAGCAACCTGTCACCAACACATCTGGTCACGCTCAGCGGAG +
Preference number: 5 (lower is better)
Translates to: ASAPTAAALSSCPHL*VATCHQHIWSRSAE
Trigger: CTCCGCTGAGCGTGACCAGATGTGTTGGTGACAGGTTGCTACTCAGAGGTGCGGACAGGAGCTGAGCGCTGCTGCTGTCGGAGCAGACGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468306.1
CDS GCA 90 bp CATAGGGCATGGCGGGCCCCAGGGCAGCATTGCTGCTGGACGTCATaGTTGACAGTAAGGCATTGGGAGAGCCTCGGAGAGTGCTACCCG +
Preference number: 5 (lower is better)
Translates to: HRAWRAPGQHCCWTS*LTVRHWESLGECYP
Trigger: CGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCATGCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTGGGGACGGCCCAGGGTaGCTGGCAGGCAGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: FKPGTARLNPTRVHTSWAGDGPG*LAGRAD
Trigger: GTCTGCTCTGCCTGCCAGCAACCCTGGGCCGTCCCC...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS GCA 90 bp GCTTCTCAGGAGCATAGGGCATGGCGGGCCCCAGGGCAGCATTGCTaGTGGACGTCATGCTTGACAGTAAGGCATTGGGAGAGCCTCGGA +
Preference number: 5 (lower is better)
Translates to: ASQEHRAWRAPGQHC*WTSCLTVRHWESLG
Trigger: TCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCATGCCCTATGCTCCTGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp GGAGCTTCTCAGGAGCATAGGGCATGGCGGGCCCCAGGGCAGCATTaGTGCTGGACGTCATGCTTGACAGTAAGGCATTGGGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GASQEHRAWRAPGQH*CWTSCLTVRHWESL
Trigger: GAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCATGCCCTATGCTCCTGAGAAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp AATGAAGAATGGTCAGGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTaGAGCTGCAAGGTGGCAGTGGCCGTGGAGGAGGCAGTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: NEEWSGCCCCCCCCC*SCKVAVAVEEAVAE
Trigger: CTCAGCCACTGCCTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp AGGAATGAAGAATGGTCAGGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGCAGCTGCAAGGTGGCAGTGGCCGTGGAGGAGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RNEEWSGCCCCCCCC*CSCKVAVAVEEAVA
Trigger: AGCCACTGCCTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp TCTCAGGAGCATAGGGCATGGCGGGCCCCAGGGCAGCATTGCTGCTaGACGTCATGCTTGACAGTAAGGCATTGGGAGAGCCTCGGAGAG +
Preference number: 5 (lower is better)
Translates to: SQEHRAWRAPGQHCC*TSCLTVRHWESLGE
Trigger: CTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCATGCCCTATGCTCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp TCCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCGCCGCTTCCCCAGAGTaGGTGAGATCACTCCCATGC +
Preference number: 5 (lower is better)
Translates to: SRWIAETGLGSHTVSAPLAASPE*VRSLPC
Trigger: GCATGGGAGTGATCTCACCAACTCTGGGGAAGCGGC...GAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS GCA 90 bp AGAAGGAATGAAGAATGGTCAGGCTGCTGCTGCTGTTGCTGCTGCTaGTGCTGCAGCTGCAAGGTGGCAGTGGCCGTGGAGGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RRNEEWSGCCCCCCC*CCSCKVAVAVEEAV
Trigger: CACTGCCTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp AGTGAGGCTTCGGATCAGGGAACACTGTGGGGTGAAGGACTGCTGTaGCAAGCCTGGGCTAGAGAGCTTCTCTGGGCGATAGGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: SEASDQGTLWGEGLL*QAWARELLWAIGWG
Trigger: TCCCCACCCTATCGCCCAGAGAAGCTCTCTAGCCCAGGCTTGCCACAGCAGTCCTTCACCCCACAGTGTTCCCTGATCCGAAGCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCGCCTGGACCTGGCTCTaGGACTGTGCCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSAWTWL*DCAIEE
Trigger: TTCTTCAATGGCACAGTCCAAGAGCCAGGTCCAGGC...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS TCA 90 bp CACACGAAGAGCGAGCACGGAGAGCCAAAAGCCAGCGGTCATCAGTaGCAGGGCGAGAGAGCGCTCAGGACCGAGAGACCAAGAAAGACA +
Preference number: 5 (lower is better)
Translates to: HTKSEHGEPKASGHQ*QGERALRTERPRKT
Trigger: TGTCTTTCTTGGTCTCTCGGTCCTGAGCGCTCTCTCGCCCTGTCACTGATGACCGCTGGCTTTTGGCTCTCCGTGCTCGCTCTTCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS-3UTR CAA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCATCGCAGCGGGCACTaGTGCCTCCCAATCAGATGG +
Preference number: 5 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGHRSGH*CLPIRW
Trigger: CCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATG...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGAGGAACCCAGCCCTGTaGCAGATCACCCCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGRNPAL*QITPWL
Trigger: TAGCCAGGGGGTGATCTGCAACAGGGCTGGGTTCCT...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS GCA 90 bp TGCATCATCTGCTGCAGAAGGAATGAAGAATGGTCAGGCTGCTGCTaGTGTTGCTGCTGCTGCTGCTGCAGCTGCAAGGTGGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: CIICCRRNEEWSGCC*CCCCCCCSCKVAVA
Trigger: GGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCAGATGATGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp AGCAGGGAAGGCTGCCTAGAGGTGGTAGGCATGGAGGGCATCTTCTaGGGACCCGGCTCAGAAACAAAATGGGACAAGGGCTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SREGCLEVVGMEGIF*GPGSETKWDKGLVL
Trigger: CAACACCAAGCCCTTGTCCCATTTTGTTTCTGAGCCGGGTCCCCAGAAGATGCCCTCCATGCCTACCACCTCTAGGCAGCCTTCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp GCCTCTCCCAAATCTGGAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGCCGAAGGCTTGGGAGTaGTGCTTAGGGTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: ASPKSGELSQPPGKVSLWPKAWE*CLGLPG
Trigger: CCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGG...CCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTCCAGATTTGGGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS TCA 90 bp GACGGCCCAGGGTTGCTGGCAGGCAGAGCAGACATCAGGTGTCCTTaGGGGGTTTTGATGGTAGAGGACATGAGGTTGGCAAGAATGGAG +
Preference number: 5 (lower is better)
Translates to: DGPGLLAGRADIRCP*GVLMVEDMRLARME
Trigger: CTCCATTCTTGCCAACCTCATGTCCTCTACCATCAAAACCCCTCAAGGACACCTGATGTCTGCTCTGCCTGCCAGCAACCCTGGGCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp GTAAATGGCTCCGTGGCTCCTGGGCTGGAGCTTGCCATCCCCTGCTaGATGATCATGCTCAGGGTTTTGGATGAGTTGCTGCTTATGGGC +
Preference number: 5 (lower is better)
Translates to: VNGSVAPGLELAIPC*MIMLRVLDELLLMG
Trigger: GCCCATAAGCAGCAACTCATCCAAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAGCTCCAGCCCAGGAGCCACGGAGCCATTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp TGCTGCATCATCTGCTGCAGAAGGAATGAAGAATGGTCAGGCTGCTaGTGCTGTTGCTGCTGCTGCTGCTGCAGCTGCAAGGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: CCIICCRRNEEWSGC*CCCCCCCCSCKVAV
Trigger: CACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCAGATGATGCAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp GGTTGCTGCATCATCTGCTGCAGAAGGAATGAAGAATGGTCAGGCTaGTGCTGCTGTTGCTGCTGCTGCTGCTGCAGCTGCAAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GCCIICCRRNEEWSG*CCCCCCCCCSCKVA
Trigger: TGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCAGATGATGCAGCAACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp CCAGGGCAGCATTGCTGCTGGACGTCATGCTTGACAGTAAGGCATTaGGAGAGCCTCGGAGAGTGCTACCCGACAAGGTATTGGACGACA +
Preference number: 5 (lower is better)
Translates to: PGQHCCWTSCLTVRH*ESLGECYPTRYWTT
Trigger: TGTCGTCCAATACCTTGTCGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp AAACGCTGGGGTTGCTGCATCATCTGCTGCAGAAGGAATGAAGAATaGTCAGGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KRWGCCIICCRRNEE*SGCCCCCCCCCCSC
Trigger: GCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCAGATGATGCAGCAACCCCAGCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp CCAGGTGGATTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCTGGGGAAGCATGCTCTaGATTACAAGCCGACTTTTC +
Preference number: 5 (lower is better)
Translates to: PGGLLRQGSAHTLSLRLSWGSML*ITSRLF
Trigger: GAAAAGTCGGCTTGTAATCAAGAGCATGCTTCCCCA...GGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAATCCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp GAGAACTCTCCCAGCCTCCTGGTAAAGTGTCTCTGTGGGGCACTTAACGATAAAGCCGAACTGCGGCTGTaGAGTGAGAGCAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ENSPSLLVKCLCGALNDKAELRL*SESRAG
Trigger: CCCAGCCCTGCTCTCACTCAACAGCCGCAGTTCGGC...TTTATCGTTAAGTGCCCCACAGAGACACTTTACCAGGAGGCTGGGAGAGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTCTGAAGCTGGGGTTGTaGGCCAGGGGCACTTGTGTT +
Preference number: 5 (lower is better)
Translates to: FKPGTARLNPTRVHTSWALKLGL*ARGTCV
Trigger: AACACAAGTGCCCCTGGCCAACAACCCCAGCTTCAG...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS TCA 90 bp TCGCTGAAAACGCTGGGGTTGCTGCATCATCTGCTGCAGAAGGAATaGAGAATGGTCAGGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLKTLGLLHHLLQKE*RMVRLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCAGATGATGCAGCAACCCCAGCGTTTTCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp AGTGAAAGAGTTCCCGTGTTGATGCTGGGGCTTCACCGAGCTAGCTaGAGAAGTCCATGCAAACAGATGGCAACAGCCCTGTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SERVPVLMLGLHRAS*RSPCKQMATALSGQ
Trigger: CTGCCCAGACAGGGCTGTTGCCATCTGTTTGCATGGACTTCTGCAGCTAGCTCGGTGAAGCCCCAGCATCAACACGGGAACTCTTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683696.1
CDS CCA 90 bp CTGGCCAGCCACTCCCATAGCCGCAGGGCTAGGATTTATTGTCAATaGAGGGACCTGCAGTTCTGCACAAGCAGTACTAGGATGAGCACC +
Preference number: 5 (lower is better)
Translates to: LASHSHSRRARIYCQ*RDLQFCTSSTRMST
Trigger: GGTGCTCATCCTAGTACTGCTTGTGCAGAACTGCAGGTCCCTCCATTGACAATAAATCCTAGCCCTGCGGCTATGGGAGTGGCTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATCTAGAAGCAAACTCCTaGCTGGAAGCCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNLEANS*LEARLS
Trigger: GGAGAGCCTGGCTTCCAGCAAGGAGTTTGCTTCTAG...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTCTACCCGACAAGGTATaGGACGACATGCAGGACACC +
Preference number: 5 (lower is better)
Translates to: FKPGTARLNPTRVHTSWALPDKV*DDMQDT
Trigger: GGTGTCCTGCATGTCGTCCAATACCTTGTCGGGTAG...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGACCCATGCAGCATTGTaGAACGCAGTGGGCATTCTT +
Preference number: 5 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWTHAAL*NAVGIL
Trigger: AAGAATGCCCACTGCGTTCAACAATGCTGCATGGGT...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTGCTGAGACAGGGCTCGGCTCACACACTGTCTCTGCGCCTCTCCCAAATCTGGTCGATCAGCCTCAAGTaGCACACCCAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: LLRQGSAHTLSLRLSQIWSISLK*HTQSSS
Trigger: AGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGA...CCAGATTTGGGAGAGGCGCAGAGACAGTGTGTGAGCCGAGCCCTGTCTCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS TCA 90 bp ATGAGAGTGGGGATTGGACTTCAAACTACCCAGACAAAGAATGGCTaGGCAAGCCAAGGATGCTGTGGCTGGGGCAGAGCAGACTGTGGG +
Preference number: 5 (lower is better)
Translates to: MRVGIGLQTTQTKNG*ASQGCCGWGRADCG
Trigger: CCCACAGTCTGCTCTGCCCCAGCCACAGCATCCTTGGCTTGCTCAGCCATTCTTTGTCTGGGTAGTTTGAAGTCCAATCCCCACTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS TCA 90 bp CCAAGAAAGACAGGAGACCGTACGAGACACAGAGAAGGCAGAGACTaGGAGACAGATACCGAGAGAGGCACCGGCGGAGATAGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: PRKTGDRTRHREGRD*ETDTERGTGGDRGR
Trigger: TCTACCTCTATCTCCGCCGGTGCCTCTCTCGGTATCTGTCTCTCAGTCTCTGCCTTCTCTGTGTCTCGTACGGTCTCCTGTCTTTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS GCA 90 bp AGCCGCAGGGCTAGGATTTATTGTCAATGGAGGGACCTGCAGTTCTaGACAAGCAGTACTAGGATGAGCACCTGGGCCCATTGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: SRRARIYCQWRDLQF*TSSTRMSTWAHCKG
Trigger: ACCCTTGCAATGGGCCCAGGTGCTCATCCTAGTACTGCTTGTGCAGAACTGCAGGTCCCTCCATTGACAATAAATCCTAGCCCTGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 90 bp ATCCACGAGGGCTTCTTTCCCGATTCCTGGAGCTTTCTGGGCTCCTaGCGATTTCCCACCATGGCGAAATGGGGAAGCATGCTCTTGATT +
Preference number: 5 (lower is better)
Translates to: IHEGFFPDSWSFLGS*RFPTMAKWGSMLLI
Trigger: AATCAAGAGCATGCTTCCCCATTTCGCCATGGTGGGAAATCGTCAGGAGCCCAGAAAGCTCCAGGAATCGGGAAAGAAGCCCTCGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000682016.1
ENST00000682253.1
CDS TCA 90 bp ATTGTCAATGGAGGGACCTGCAGTTCTGCACAAGCAGTACTAGGATaGGCACCTGGGCCCATTGCAAGGGTGACATCTTCAAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: IVNGGTCSSAQAVLG*APGPIARVTSSRQG
Trigger: GCCTTGCCTTGAAGATGTCACCCTTGCAATGGGCCCAGGTGCTCATCCTAGTACTGCTTGTGCAGAACTGCAGGTCCCTCCATTGACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp CCAGGCTCTCCAAGTGTGACATCTGAACCGAAGGCTTGGGAGTTGTaGTTAGGGTTGCCTGGGGATGATCTAAAACCAGTGGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: PGSPSVTSEPKAWEL*LGLPGDDLKPVALL
Trigger: CAGAAGAGCCACTGGTTTTAGATCATCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGTCACACTTGGAGAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp AAAGTAAATGGCTCCGTGGCTCCTGGGCTGGAGCTTGCCATCCCCTaGTGCATGATCATGCTCAGGGTTTTGGATGAGTTGCTGCTTATG +
Preference number: 5 (lower is better)
Translates to: KVNGSVAPGLELAIP*CMIMLRVLDELLLM
Trigger: CATAAGCAGCAACTCATCCAAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAGCTCCAGCCCAGGAGCCACGGAGCCATTTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp AGGAGTCTGGGCATGCCAGTCTCAGGGAGACCCAGACAGACTGGCTaGATTCAGAGGATGGTAAGTAATGAGAGTGGGGATTGGACTTCA +
Preference number: 5 (lower is better)
Translates to: RSLGMPVSGRPRQTG*IQRMVSNESGDWTS
Trigger: TGAAGTCCAATCCCCACTCTCATTACTTACCATCCTCTGAATGCAGCCAGTCTGTCTGGGTCTCCCTGAGACTGGCATGCCCAGACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS CCA 90 bp TGGAGGGACCTGCAGTTCTGCACAAGCAGTACTAGGATGAGCACCTaGGCCCATTGCAAGGGTGACATCTTCAAGGCAAGGCCTCTTAAT +
Preference number: 5 (lower is better)
Translates to: WRDLQFCTSSTRMST*AHCKGDIFKARPLN
Trigger: ATTAAGAGGCCTTGCCTTGAAGATGTCACCCTTGCAATGGGCCCAGGTGCTCATCCTAGTACTGCTTGTGCAGAACTGCAGGTCCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp TGCTGGAAGCCAGGCTCTCCAAGTGTGACATCTGAACCGAAGGCTTaGGAGTTGTGCTTAGGGTTGCCTGGGGATGATCTAAAACCAGTG +
Preference number: 5 (lower is better)
Translates to: CWKPGSPSVTSEPKA*ELCLGLPGDDLKPV
Trigger: CACTGGTTTTAGATCATCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGTCACACTTGGAGAGCCTGGCTTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp GCTTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGGAGTTGTGCTTAGGGTaGCCTGGGGATGATCTAAAA +
Preference number: 5 (lower is better)
Translates to: ALNQEQLALTPRGCTQAGELCLG*PGDDLK
Trigger: TTTTAGATCATCCCCAGGCAACCCTAAGCACAACTC...CCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS GCA 90 bp ATGGGCTTAAAGATCACATTTGCTTGCTGCTGCTGCTGCTGCTGCTaGTGTTGCTGGCTTAGAAGATTACTGGTGGGAGTGAGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: MGLKITFACCCCCCC*CCWLRRLLVGVRLR
Trigger: CCGAAGCCTCACTCCCACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp GAGGAAATAAGGAGAGGAGGAGAGGGACCAGAGAACAAGAGAGCTTaGAAGAGGAATGACAGATCCCCAGAGGACCCTGAAGTGTCACAG +
Preference number: 5 (lower is better)
Translates to: EEIRRGGEGPENKRA*KRNDRSPEDPEVSQ
Trigger: CTGTGACACTTCAGGGTCCTCTGGGGATCTGTCATTCCTCTTGCAAGCTCTCTTGTTCTCTGGTCCCTCTCCTCCTCTCCTTATTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS CCA 90 bp AAGATCACATTTGCTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTaGCTTAGAAGATTACTGGTGGGAGTGAGGCTTCGGATCAGGGAA +
Preference number: 5 (lower is better)
Translates to: KITFACCCCCCCCCC*LRRLLVGVRLRIRE
Trigger: TTCCCTGATCCGAAGCCTCACTCCCACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp AGTAATGAGAGTGGGGATTGGACTTCAAACTACCCAGACAAAGAATaGCTGAGCAAGCCAAGGATGCTGTGGCTGGGGCAGAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: SNESGDWTSNYPDKE*LSKPRMLWLGQSRL
Trigger: CAGTCTGCTCTGCCCCAGCCACAGCATCCTTGGCTTGCTCAGCCATTCTTTGTCTGGGTAGTTTGAAGTCCAATCCCCACTCTCATTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS TCA 90 bp TGTCTCCTCTTAACAGTTCCCGATTCCTGGAGCTTTCTGGGCTCCTaGCGATTTCCCACCATGGCGAAATGGGGAAGCATGCTCTTGATT +
Preference number: 5 (lower is better)
Translates to: CLLLTVPDSWSFLGS*RFPTMAKWGSMLLI
Trigger: AATCAAGAGCATGCTTCCCCATTTCGCCATGGTGGGAAATCGTCAGGAGCCCAGAAAGCTCCAGGAATCGGGAACTGTTAAGAGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426613.5
ENST00000432680.7
ENST00000683453.1
CDS GCA 90 bp TTAAAGATCACATTTGCTTGCTGCTGCTGCTGCTGCTGCTGCTGTTaGTGGCTTAGAAGATTACTGGTGGGAGTGAGGCTTCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: LKITFACCCCCCCCC*WLRRLLVGVRLRIR
Trigger: CCTGATCCGAAGCCTCACTCCCACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 90 bp GGAGCTTGCCATCCCCTGCTGCATGATCATGCTCAGGGTTTTGGATaGGTTGCTGCTTATGGGCTTAAAGATCACATTTGCTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GACHPLLHDHAQGFG*VAAYGLKDHICLLL
Trigger: CAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTCATCCAAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp GAGTTGCTGCTTATGGGCTTAAAGATCACATTTGCTTGCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGGCTTAGAAGATTACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: ELLLMGLKITFACCC*CCCCCCWLRRLLVG
Trigger: TCCCACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp CGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTTTTTCTCTCGGTCTGAATTTGGCATTTGTCAACTaGCACAACAACTCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: RLNPTRVHTSWAFSLGLNLAFVN*HNNSWS
Trigger: TGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAA...ATTCAGACCGAGAGAAAAAGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS TCA 90 bp GCTCCTGACGATTTCCCACCATGGCGAAATGGGGAAGCATGCTCTTaGTTACAAGCCGACTTTTCCAGTCATCCATTGTTTGACCTGCAA +
Preference number: 5 (lower is better)
Translates to: APDDFPPWRNGEACS*LQADFSSHPLFDLQ
Trigger: TTGCAGGTCAAACAATGGATGACTGGAAAAGTCGGCTTGTAATCAAGAGCATGCTTCCCCATTTCGCCATGGTGGGAAATCGTCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
CDS TCA 90 bp TCTTCTCAAGATCTAGCTCATTTGGAGAAGGGTCTTGAATTTTGGTaGGCTCCTCTAGCAGCTCTTGAAGCTCCTGGTCTACAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: SSQDLAHLEKGLEFW*APLAALEAPGLQPA
Trigger: TGCCGGCTGTAGACCAGGAGCTTCAAGAGCTGCTAGAGGAGCTCACCAAAATTCAAGACCCTTCTCCAAATGAGCTAGATCTTGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 90 bp AGGAATCGAATAGCTGATCCCTGTGGAGGAGGATGGGATCTGAAGTaGCATGCCAGTAACTTGGCTGCAACTAGAAGCAAACTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: RNRIADPCGGGWDLK*HASNLAATRSKLLA
Trigger: AGCAAGGAGTTTGCTTCTAGTTGCAGCCAAGTTACTGGCATGTCACTTCAGATCCCATCCTCCTCCACAGGGATCAGCTATTCGATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp CTGCAGTTCTGCACAAGCAGTACTAGGATGAGCACCTGGGCCCATTaGAAGGGTGACATCTTCAAGGCAAGGCCTCTTAATTTTATTAGG +
Preference number: 5 (lower is better)
Translates to: LQFCTSSTRMSTWAH*KGDIFKARPLNFIR
Trigger: CCTAATAAAATTAAGAGGCCTTGCCTTGAAGATGTCACCCTTGCAATGGGCCCAGGTGCTCATCCTAGTACTGCTTGTGCAGAACTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp GATGAGTTGCTGCTTATGGGCTTAAAGATCACATTTGCTTGCTGCTaGTGCTGCTGCTGCTGCTGTTGCTGGCTTAGAAGATTACTGGTG +
Preference number: 5 (lower is better)
Translates to: DELLLMGLKITFACC*CCCCCCCWLRRLLV
Trigger: CACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp CCCATGATGTTGCCATTCATAGGGTTATTCTCCAGCAGTAATGACTaGCCAGCCACTCCCATAGCCGCAGGGCTAGGATTTATTGTCAAT +
Preference number: 5 (lower is better)
Translates to: PMMLPFIGLFSSSND*PATPIAAGLGFIVN
Trigger: ATTGACAATAAATCCTAGCCCTGCGGCTATGGGAGTGGCTGGCCAGTCATTACTGCTGGAGAATAACCCTATGAATGGCAACATCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGCCTGCAAATTTATTCTaGACTCTCCAAGGCGTTTCC +
Preference number: 5 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWPANLF*TLQGVS
Trigger: GGAAACGCCTTGGAGAGTCAAGAATAAATTTGCAGG...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTTAAACCAGGAACAGCTCGCCTTAACCCCACGAGGGTGCACACAAGCTGGGCTCAAGATCTAGCTCATTaGGAGAAGGGTCTTGAATTT +
Preference number: 5 (lower is better)
Translates to: FKPGTARLNPTRVHTSWAQDLAH*EKGLEF
Trigger: AAATTCAAGACCCTTCTCCAAATGAGCTAGATCTTG...AGCCCAGCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATGTTGGCCAGGGGCACTaGTGTTCCCATCGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYVGQGH*CSHRSG
Trigger: CCCGCTGCGATGGGAACACAAGTGCCCCTGGCCAAC...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS GCA 90 bp TTGGATGAGTTGCTGCTTATGGGCTTAAAGATCACATTTGCTTGCTaGTGCTGCTGCTGCTGCTGCTGTTGCTGGCTTAGAAGATTACTG +
Preference number: 5 (lower is better)
Translates to: LDELLLMGLKITFAC*CCCCCCCCWLRRLL
Trigger: CAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTCATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 90 bp TGGACGGCTTCAAATGGACTCATCTGTTGGGAGATATATGCATTCTaGCGTTCAGGGGTCATTGCCATAAGACCTGATCTCTGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: WTASNGLICWEIYAF*RSGVIAIRPDLCSS
Trigger: AGAGGAACAGAGATCAGGTCTTATGGCAATGACCCCTGAACGGCAGAATGCATATATCTCCCAACAGATGAGTCCATTTGAAGCCGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000464149.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGGTAGCAGACCCCTGCTaGCTGGCTGCCAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: FLFGICQLAQQLLVISTLVADPC*LAANAF
Trigger: GAAGGCGTTGGCAGCCAGCAAGCAGGGGTCTGCTAC...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCCTTGACAGTAAGGCATaGGGAGAGCCTCGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVLDSKA*GEPRRV
Trigger: CACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAG...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATGCTCCTCCAGGTGGATaGCTGAGACAGGGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHAPPGG*LRQGSA
Trigger: AGCCGAGCCCTGTCTCAGCAATCCACCTGGAGGAGC...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS GCA 90 bp GTTTTGGATGAGTTGCTGCTTATGGGCTTAAAGATCACATTTGCTTaGTGCTGCTGCTGCTGCTGCTGCTGTTGCTGGCTTAGAAGATTA +
Preference number: 5 (lower is better)
Translates to: VLDELLLMGLKITFA*CCCCCCCCCWLRRL
Trigger: TAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTCATCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 90 bp GCAAGGCCTCTTAATTTTATTAGGGTAGCCCCCATCAGCCATGTCTaGAAACTGGAAGTGGTCTTCTTCTTGTCTCCTCTTAACAGTTCC +
Preference number: 5 (lower is better)
Translates to: ARPLNFIRVAPISHV*KLEVVFFLSPLNSS
Trigger: GGAACTGTTAAGAGGAGACAAGAAGAAGACCACTTCCAGTTTCCAGACATGGCTGATGGGGGCTACCCTAATAAAATTAAGAGGCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS-3UTR CAA 90 bp TCACACAAGGCAATAGGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTACTGGGGGTGGGCCCTaGCTGCTTTGTAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: SHKAIGFLVNIEINGQVVTGGGP*LLCSRP
Trigger: GGGTCTGCTACAAAGCAGCAAGGGCCCACCCCCAGT...AACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCCTATTGCCTTGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAGAGTGACCCATGCAGCATaGTTGAACGCAGTGGGCATT +
Preference number: 5 (lower is better)
Translates to: CTRSLKNHQLSILSQVERVTHAA*LNAVGI
Trigger: AATGCCCACTGCGTTCAACAATGCTGCATGGGTCAC...TCTCTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TCACACAAGGCAATAGGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTAGGCTGAAGCTGGGGTaGTTGGCCAGGGGCACTTGT +
Preference number: 5 (lower is better)
Translates to: SHKAIGFLVNIEINGQVVRLKLG*LARGTC
Trigger: ACAAGTGCCCCTGGCCAACAACCCCAGCTTCAGCCT...AACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCCTATTGCCTTGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGGAACTTGGTGGTGTTaGCTACAGGCACCGGGCCCT +
Preference number: 5 (lower is better)
Translates to: FQICTRSLKNHQLSILSQGTWWC*LQAPGP
Trigger: AGGGCCCGGTGCCTGTAGCAAACACCACCAAGTTCC...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAACAGCAGCCACATAGCTaGGTGGCTCGATGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: CQLAQQLLVISTLLIALKQQPHS*VARCPV
Trigger: TACAGGGCATCGAGCCACCAAGCTATGTGGCTGCTG...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp GGGTATGGATCGACACCACTTCCTAGAGTGATGTCACCATGGGGGTTTCTATGGTTGGTCATATCCACATaGCTCATTGCATTAAAACCA +
Preference number: 5 (lower is better)
Translates to: GYGSTPLPRVMSPWGFLWLVIST*LIALKP
Trigger: TGGTTTTAATGCAATGAGCAATGTGGATATGACCAA...CCATAGAAACCCCCATGGTGACATCACTCTAGGAAGTGGTGTCGATCCATACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCAGACATCAGGTGTCCTaGAGGGGTTTTGATGGTAGA +
Preference number: 5 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVRHQVS*RGFDGR
Trigger: TCTACCATCAAAACCCCTCAAGGACACCTGATGTCT...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAGAGACAAGGGCTTGGTGTaGCCAAAAGTAAATGGCTCC +
Preference number: 5 (lower is better)
Translates to: CTRSLKNHQLSILSQVERDKGLV*PKVNGS
Trigger: GGAGCCATTTACTTTTGGCAACACCAAGCCCTTGTC...TCTCTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTGAAAACGCTGGGGTaGCTGCATCATCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: FLFGICQLAQQLLVISTLLKTLG*LHHLLQ
Trigger: CTGCAGCAGATGATGCAGCAACCCCAGCGTTTTCAG...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS TCA 90 bp AGCATGCTCTTGATTACAAGCCGACTTTTCCAGTCATCCATTGTTTaGCCTGCAAATTTATTCTTGACTCTCCAAGGCGTTTCCCAAACG +
Preference number: 5 (lower is better)
Translates to: SMLLITSRLFQSSIV*PANLFLTLQGVSQT
Trigger: CGTTTGGGAAACGCCTTGGAGAGTCAAGAATAAATTTGCAGGTCAAACAATGGATGACTGGAAAAGTCGGCTTGTAATCAAGAGCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
CDS-3UTR CAA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGTGCTGGACGTCATGCTaGACAGTAAGGCATTGGGAG +
Preference number: 5 (lower is better)
Translates to: FLFGICQLAQQLLVISTLCWTSC*TVRHWE
Trigger: CTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCA...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGGGTGAGCCCATGATGTaGCCATTCATAGGGTTATTC +
Preference number: 5 (lower is better)
Translates to: ICTRSLKNHQLSILSQVEGEPMM*PFIGLF
Trigger: GAATAACCCTATGAATGGCAACATCATGGGCTCACC...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGTCTTGGACTGTGCCATaGAAGAACTCGGTGACACTA +
Preference number: 5 (lower is better)
Translates to: ICTRSLKNHQLSILSQVESWTVP*KNSVTL
Trigger: TAGTGTCACCGAGTTCTTCAATGGCACAGTCCAAGA...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGGGAGGTGACTTGTTCTaGGACGGCTTCAAATGGACT +
Preference number: 5 (lower is better)
Translates to: FLFGICQLAQQLLVISTLGGDLF*DGFKWT
Trigger: AGTCCATTTGAAGCCGTCCAAGAACAAGTCACCTCC...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTTGATCCGGCTACACTaGGAGGTGACTTGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHLIRLH*EVTCSW
Trigger: CCAAGAACAAGTCACCTCCAAGTGTAGCCGGATCAA...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGAACGCTATTATCCACTaGGCTGAGGGGTGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: FLFGICQLAQQLLVISTLNAIIH*AEGCFP
Trigger: GGGAAAACACCCCTCAGCCAAGTGGATAATAGCGTT...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp ATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGGTAGAGAGGGTTTTGGATGAGTaGCTGCTTATGGGCTTAAAG +
Preference number: 5 (lower is better)
Translates to: ICTRSLKNHQLSILSQVERVLDE*LLMGLK
Trigger: CTTTAAGCCCATAAGCAGCAACTCATCCAAAACCCT...CTCTACCTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TGGCCAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCAAATGGACTCATCTGTaGGGAGATATATGCATTCTG +
Preference number: 5 (lower is better)
Translates to: WPSGFLFGICQLAQQLLVKWTHL*GDICIL
Trigger: CAGAATGCATATATCTCCCAACAGATGAGTCCATTT...GACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATGAAGTGGTCTTCTTCTaGTCTCCTCTTAACAGTTCC +
Preference number: 5 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHEVVFF*SPLNSS
Trigger: GGAACTGTTAAGAGGAGACAAGAAGAAGACCACTTC...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGATCATGCTCAGGGTTTaGGATGAGTTGCTGCTTATG +
Preference number: 5 (lower is better)
Translates to: FLFGICQLAQQLLVISTLIMLRV*DELLLM
Trigger: CATAAGCAGCAACTCATCCAAAACCCTGAGCATGAT...CAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TCACACAAGGCAATAGGATTTTTAGTGAACATAGAAATAAATGGCCAAGTGGTTACACTTGGAGGTGACTaGTTCTTGGACGGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SHKAIGFLVNIEINGQVVTLGGD*FLDGFK
Trigger: TTTGAAGCCGTCCAAGAACAAGTCACCTCCAAGTGT...AACCACTTGGCCATTTATTTCTATGTTCACTAAAAATCCTATTGCCTTGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp ATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATATGAAATCTACCTCATaGCAGTCAGGTGACGAAATC +
Preference number: 5 (lower is better)
Translates to: IWHLSTCTTTLGHIHIAHMKSTS*QSGDEI
Trigger: GATTTCGTCACCTGACTGCAATGAGGTAGATTTCAT...ATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp GTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCCACATAAATGGGACAAGGGCTaGGTGTTGCCAAAAGTAAAT +
Preference number: 5 (lower is better)
Translates to: VFYLAFVNLHNNSWSYPHKWDKG*VLPKVN
Trigger: ATTTACTTTTGGCAACACCAAGCCCTTGTCCCATTT...ATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TTTCAAATATGTACACGTAGCTTGAAAAATCACCAGCTTTCCATTTTGTCACAGCTTGCACAACAACTCTaGGTCATATCCACATTGCTC +
Preference number: 5 (lower is better)
Translates to: FQICTRSLKNHQLSILSQLAQQL*VISTLL
Trigger: GAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAG...CTGTGACAAAATGGAAAGCTGGTGATTTTTCAAGCTACGTGTACATATTTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp CAAGTGGTTTTCTATTTGGCATTTGTCAACTTGCACAACAACTCTTGGTCATATCAAGTGGTTTTCTATTaGGCATTTGTCAACTTGCAC +
Preference number: 5 (lower is better)
Translates to: QVVFYLAFVNLHNNSWSYQVVFY*AFVNLH
Trigger: GTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG...ATATGACCAAGAGTTGTTGTGCAAGTTGACAAATGCCAAATAGAAAACCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS-3UTR CAA 90 bp TGTCAACTTGCACAACAACTCTTGGTCATATCCACATTGCTCATTGCATTAAAACCAGTCATCCATTGTTaGACCTGCAAATTTATTCTT +
Preference number: 5 (lower is better)
Translates to: CQLAQQLLVISTLLIALKPVIHC*TCKFIL
Trigger: AAGAATAAATTTGCAGGTCAAACAATGGATGACTGG...TTTTAATGCAATGAGCAATGTGGATATGACCAAGAGTTGTTGTGCAAGTTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432680.7
CDS GCA 72 bp AGCCCTGTTGCAGATCACCCCCTGGCTAGCGGCCGGTaGCCCCGCGCCCGCCCGCCGCCGGCCGCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SPVADHPLASGR*PRARPPPAASA
Trigger: AGCTGAAGCGGCCGGCGGCGGGCGGGCGCGGGGGCACCGGCCGCTAGCCAGGGGGTGATCTGCAACAGGGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370401.7
ENST00000432680.7
ENST00000683696.1
CDS CAA 90 bp CGCGGGCAGCCTGGACTCAGGCGGCCGCCAAGGAACCCAGCCCTGTaGCAGATCACCCCCTGGCTAGCGGCCGGTGCCCCCGCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: RGQPGLRRPPRNPAL*QITPWLAAGAPAPA
Trigger: GGCGGGCGCGGGGGCACCGGCCGCTAGCCAGGGGGTGATCTGCAACAGGGCTGGGTTCCTTGGCGGCCGCCTGAGTCCAGGCTGCCCGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370401.7
ENST00000432680.7
ENST00000683696.1
CDS TCA 72 bp CCCTCCGCCCACGCATCCGCTCACCAGCTCGCGCCCTaGCTGCCAAACAGACCCGCTGTGGCGGCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: PSAHASAHQLAP*LPNRPAVAAAG
Trigger: CCCCGCTGCCGCCACAGCGGGTCTGTTTGGCAGTCAGGGCGCGAGCTGGTGAGCGGATGCGTGGGCGGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426613.5
ENST00000683453.1
CDS GCA 72 bp CCGCCCACGCATCCGCTCACCAGCTCGCGCCCTGACTaGCAAACAGACCCGCTGTGGCGGCAGCGGGGACCA +
Preference number: 6 (lower is better)
Translates to: PPTHPLTSSRPD*QTDPLWRQRGP
Trigger: TGGTCCCCGCTGCCGCCACAGCGGGTCTGTTTGGCAGTCAGGGCGCGAGCTGGTGAGCGGATGCGTGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426613.5
ENST00000683453.1
CDS GCA 72 bp CCCGCCGCCGGCCGCTTCAGCTCGCGGCCAAGTTCATaGTGGCGGCGCTGCAGTGGCGGCCTCAATCTGCTC +
Preference number: 6 (lower is better)
Translates to: PAAGRFSSRPSS*WRRCSGGLNLL
Trigger: GAGCAGATTGAGGCCGCCACTGCAGCGCCGCCAGCATGAACTTGGCCGCGAGCTGAAGCGGCCGGCGGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683696.1
CDS CCA 72 bp GGCTTGCCTAGGCGGTGCGCTGCAGTGGGTGGCTGCTaGGTGGGTAGCGCCAGTCCCTCCGCCCACGCATCC +
Preference number: 6 (lower is better)
Translates to: GLPRRCAAVGGC*VGSASPSAHAS
Trigger: GGATGCGTGGGCGGAGGGACTGGCGCTACCCACCCAGCAGCCACCCACTGCAGCGCACCGCCTAGGCAAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426613.5
ENST00000683453.1
CDS CAA 72 bp CCTGGACTCAGGCGGCCGCCAAGGAACCCAGCCCTGTaGCAGATCACCCCCTGGCTAGCGGCCGGTGCCCCC +
Preference number: 6 (lower is better)
Translates to: PGLRRPPRNPAL*QITPWLAAGAP
Trigger: GGGGGCACCGGCCGCTAGCCAGGGGGTGATCTGCAACAGGGCTGGGTTCCTTGGCGGCCGCCTGAGTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370401.7
ENST00000432680.7
ENST00000683696.1
CDS GCA 72 bp GGCTTGGCTGCTCCGCACTCAGTGGAGGGTGGTCTGTaGCCCCGGCGTCAGCTGGCTTGCCTAGGCGGTGCG +
Preference number: 6 (lower is better)
Translates to: GLAAPHSVEGGL*PRRQLACLGGA
Trigger: CGCACCGCCTAGGCAAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCACTGAGTGCGGAGCAGCCAAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262858.8
ENST00000426613.5
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
CDS GCA 72 bp GAGCGGGCACCTGCCTCCAGGCCTTCGGATCCCAGCTaGCCCAGGGCGCTGCCTCTGAGGTGCTGTACGAGG +
Preference number: 6 (lower is better)
Translates to: ERAPASRPSDPS*PRALPLRCCTR
Trigger: CCTCGTACAGCACCTCAGAGGCAGCGCCCTGGGGCAGCTGGGATCCGAAGGCCTGGAGGCAGGTGCCCGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp GTGGCGTCGCAGCTAGGCAGTAGTGGAGCGGGCACCTaGCTCCAGGCCTTCGGATCCCAGCTGCCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: VASQLGSSGAGT*LQAFGSQLPQG
Trigger: GCCCTGGGGCAGCTGGGATCCGAAGGCCTGGAGGCAGGTGCCCGCTCCACTACTGCCTAGCTGCGACGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp CCCTTGGCTGCTCCGCACTCAGTGGAGGGTGGTCTGTaGCCCCGGCGTCAGCTGGCTTGCCTAGGCGGTGCG +
Preference number: 6 (lower is better)
Translates to: PLAAPHSVEGGL*PRRQLACLGGA
Trigger: CGCACCGCCTAGGCAAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCACTGAGTGCGGAGCAGCCAAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468306.1
CDS CCA 72 bp CACGCTCAGCGGAGCCGCAGGCCACGAATAAAGGGGTaGGCCCGCCGCCCACTAGGCCCCTCCTTCCCTCCA +
Preference number: 6 (lower is better)
Translates to: HAQRSRRPRIKG*ARRPLGPSFPP
Trigger: TGGAGGGAAGGAGGGGCCTAGTGGGCGGCGGGCCCACCCCTTTATTCGTGGCCTGCGGCTCCGCTGAGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468306.1
CDS CCA 72 bp GCCGCCGGCCGCTTCAGCTCGCGGCCAAGTTCATGCTaGCGGCGCTGCAGTGGCGGCCTCAATCTGCTCGCT +
Preference number: 6 (lower is better)
Translates to: AAGRFSSRPSSC*RRCSGGLNLLA
Trigger: AGCGAGCAGATTGAGGCCGCCACTGCAGCGCCGCCAGCATGAACTTGGCCGCGAGCTGAAGCGGCCGGCGGC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683696.1
CDS GCA 72 bp CTGCAGGGGCTGAGCACAACCCGGGAACGCCGCGTCTaGTCCGACAGCAGCAGCGCTCAGCTCCTGTCCGCA +
Preference number: 6 (lower is better)
Translates to: LQGLSTTRERRV*SDSSSAQLLSA
Trigger: TGCGGACAGGAGCTGAGCGCTGCTGCTGTCGGAGCAGACGCGGCGTTCCCGGGTTGTGCTCAGCCCCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262858.8
ENST00000468306.1
CDS GCA 72 bp GTGGAGGGTGGTCTGTGCCCCCGGCGTCAGCTGGCTTaGCTAGGCGGTGCGCTGGACTTCTCCAGCCGATGG +
Preference number: 6 (lower is better)
Translates to: VEGGLCPRRQLA*LGGALDFSSRW
Trigger: CCATCGGCTGGAGAAGTCCAGCGCACCGCCTAGGCAAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262858.8
ENST00000468306.1
CDS GCA 72 bp GTGGAGGGTGGTCTGTGCCCCCGGCGTCAGCTGGCTTaGCTAGGCGGTGCGCTGGTGGAAAGAGGCGACAGC +
Preference number: 6 (lower is better)
Translates to: VEGGLCPRRQLA*LGGALVERGDS
Trigger: GCTGTCGCCTCTTTCCACCAGCGCACCGCCTAGGCAAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS GCA 72 bp TCCAAGGCGTTTCCCAAACGACCTAGACACAGGGCGTaGTGCAGAGCTCCGGCGGCGGCGGGGGCAGTGTCC +
Preference number: 6 (lower is better)
Translates to: SKAFPKRPRHRA*CRAPAAAGAVS
Trigger: GGACACTGCCCCCGCCGCCGCCGGAGCTCTGCAGCACGCCCTGTGTCTAGGTCGTTTGGGAAACGCCTTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370401.7
ENST00000432680.7
CDS CCA 72 bp GCAGGACACCATGAGGCTCTGGGGGCTGAATGGGGGTaGTGGTGGTGGCAGTGGCAGCGGTGGTGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: AGHHEALGAEWG*WWWQWQRWWVW
Trigger: CCACACCCACCACCGCTGCCACTGCCACCACCACCACCCCCATTCAGCCCCCAGAGCCTCATGGTGTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp CAGCTCGCGGCCAAGTTCATGCTGGCGGCGCTGCAGTaGCGGCCTCAATCTGCTCGCTCCATTCCCACCGCC +
Preference number: 6 (lower is better)
Translates to: QLAAKFMLAALQ*RPQSARSIPTA
Trigger: GGCGGTGGGAATGGAGCGAGCAGATTGAGGCCGCCACTGCAGCGCCGCCAGCATGAACTTGGCCGCGAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683696.1
CDS GCA 72 bp CTGGGGGTGGGCCCTTGCTGCTTTGTAGCAGACCCCTaGTTGCTGGCTGCCAACGCCTTCAGCTGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: LGVGPCCFVADP*LLAANAFSWWA
Trigger: CGCCCACCAGCTGAAGGCGTTGGCAGCCAGCAAGCAGGGGTCTGCTACAAAGCAGCAAGGGCCCACCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp CGACCTAGACACAGGGCTTGGCTGCTCCGCACTCAGTaGAGGGTGGTCTGTGCCCCCGGCGTCAGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: RPRHRAWLLRTQ*RVVCAPGVSWL
Trigger: AAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCACTGAGTGCGGAGCAGCCAAGCCCTGTGTCTAGGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262858.8
ENST00000426613.5
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
CDS CCA 72 bp CGACATGCAGGACACCATGAGGCTCTGGGGGCTGAATaGGGGTGGTGGTGGTGGCAGTGGCAGCGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: RHAGHHEALGAE*GWWWWQWQRWW
Trigger: CCACCACCGCTGCCACTGCCACCACCACCACCCCCATTCAGCCCCCAGAGCCTCATGGTGTCCTGCATGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp GAGCAGGGCTGGGGAGCTTCTCAGGAGCATAGGGCATaGCGGGCCCCAGGGCAGCATTGCTGCTGGACGTCA +
Preference number: 6 (lower is better)
Translates to: EQGWGASQEHRA*RAPGQHCCWTS
Trigger: TGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCATGCCCTATGCTCCTGAGAAGCTCCCCAGCCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp TCCGCGTCTGGGGAAAACGAGCTGGTGAGCCGTGCGTaGCCGGGACACACGAAGAGCGAGCACGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: SASGENELVSRA*PGHTKSEHGEP
Trigger: TGGCTCTCCGTGCTCGCTCTTCGTGTGTCCCGGCCACGCACGGCTCACCAGCTCGTTTTCCCCAGACGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS TCA 72 bp TGGTGGTGGTGGCAGTGGCAGCGGTGGTGGGTGTGGTaGTGGCACTGGGCGGTAAGGTGGAGAGAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: WWWWQWQRWWVW*WHWAVRWRESW
Trigger: CCAGGACTCTCTCCACCTTACCGCCCAGTGCCATCACCACACCCACCACCGCTGCCACTGCCACCACCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp TGGTCAGGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTaGAGCTGCAAGGTGGCAGTGGCCGTGGAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: WSGCCCCCCCCC*SCKVAVAVEEA
Trigger: TGCCTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp GCGGGGACCAGGGCTCTCAGGTGGCAGTTAGTGAACTaGATTCTCTCCATCCCGGCCGAGTGCCCCACTCCC +
Preference number: 6 (lower is better)
Translates to: AGTRALRWQLVN*ILSIPAECPTP
Trigger: GGGAGTGGGGCACTCGGCCGGGATGGAGAGAATGCAGTTCACTAACTGCCACCTGAGAGCCCTGGTCCCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426613.5
ENST00000683453.1
CDS GCA 72 bp CGCTTCAGCTCGCGGCCAAGTTCATGCTGGCGGCGCTaGAGTGGCGGCCTCAATCTGCTCGCTCCATTCCCA +
Preference number: 6 (lower is better)
Translates to: RFSSRPSSCWRR*SGGLNLLAPFP
Trigger: TGGGAATGGAGCGAGCAGATTGAGGCCGCCACTGCAGCGCCGCCAGCATGAACTTGGCCGCGAGCTGAAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683696.1
CDS GCA 72 bp AATCTTCTTCCTCCATCCACGAGGGCTTCTTTCCCGTaGTGCAGAGCTCCGGCGGCGGCGGGGGCAGTGTCC +
Preference number: 6 (lower is better)
Translates to: NLLPPSTRASFP*CRAPAAAGAVS
Trigger: GGACACTGCCCCCGCCGCCGCCGGAGCTCTGCAGCACGGGAAAGAAGCCCTCGTGGATGGAGGAAGAAGATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683696.1
CDS CCA 72 bp TCTCTGGGCGATAGGGTGGGGACGGCCCAGGGTTGCTaGCAGGCAGAGCAGACATCAGGTGTCCTTGAGGGG +
Preference number: 6 (lower is better)
Translates to: SLGDRVGTAQGC*QAEQTSGVLEG
Trigger: CCCCTCAAGGACACCTGATGTCTGCTCTGCCTGCCAGCAACCCTGGGCCGTCCCCACCCTATCGCCCAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp CAAGCCTGGGCTAGAGAGCTTCTCTGGGCGATAGGGTaGGGACGGCCCAGGGTTGCTGGCAGGCAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: QAWARELLWAIG*GRPRVAGRQSR
Trigger: TCTGCTCTGCCTGCCAGCAACCCTGGGCCGTCCCCACCCTATCGCCCAGAGAAGCTCTCTAGCCCAGGCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp AACAGTTCCCTTGGCTGCTCCGCACTCAGTGGAGGGTaGTCTGTGCCCCCGGCGTCAGCTGGCTTGCCTAGG +
Preference number: 6 (lower is better)
Translates to: NSSLGCSALSGG*SVPPASAGLPR
Trigger: CCTAGGCAAGCCAGCTGACGCCGGGGGCACAGACCACCCTCCACTGAGTGCGGAGCAGCCAAGGGAACTGTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468306.1
CDS GCA 72 bp GAATGGTCAGGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGCAGCTGCAAGGTGGCAGTGGCCGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: EWSGCCCCCCCC*CSCKVAVAVEE
Trigger: CTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp ACTTTCCGCGTCTGGGGAAAACGAGCTGGTGAGCCGTaGGTGGCCGGGACACACGAAGAGCGAGCACGGAGA +
Preference number: 6 (lower is better)
Translates to: TFRVWGKRAGEP*VAGTHEERARR
Trigger: TCTCCGTGCTCGCTCTTCGTGTGTCCCGGCCACGCACGGCTCACCAGCTCGTTTTCCCCAGACGCGGAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS CCA 72 bp CAGCAGTCAGATCAAACTGCAAGGCAGCAGCGAGGCTaGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGATT +
Preference number: 6 (lower is better)
Translates to: QQSDQTARQQRG*GRGARHCPGLI
Trigger: AATCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCTGCCTTGCAGTTTGATCTGACTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358892.7
CDS CAA 90 bp AGGGCATGGCGGGCCCCAGGGCAGCATTGCTGCTGGACGTCATGCTaGACAGTAAGGCATTGGGAGAGCCTCGGAGAGTGCTACCCGACA +
Preference number: 6 (lower is better)
Translates to: RAWRAPGQHCCWTSC*TVRHWESLGECYPT
Trigger: TGTCGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCATGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp AGCGAGCACGGAGAGCCAAAAGCCAGCGGTCATCAGTaGCAGGGCGAGAGAGCGCTCAGGACCGAGAGACCA +
Preference number: 6 (lower is better)
Translates to: SEHGEPKASGHQ*QGERALRTERP
Trigger: TGGTCTCTCGGTCCTGAGCGCTCTCTCGCCCTGTCACTGATGACCGCTGGCTTTTGGCTCTCCGTGCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS TCA 72 bp AAGGTAGACTTTCCGCGTCTGGGGAAAACGAGCTGGTaGGCCGTGCGTGGCCGGGACACACGAAGAGCGAGC +
Preference number: 6 (lower is better)
Translates to: KVDFPRLGKTSW*AVRGRDTRRAS
Trigger: GCTCGCTCTTCGTGTGTCCCGGCCACGCACGGCTCACCAGCTCGTTTTCCCCAGACGCGGAAAGTCTACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682253.1
CDS GCA 72 bp CCCTTGCTGCTTTGTAGCAGACCCCTGCTTGCTGGCTaGCAACGCCTTCAGCTGGTGGGCGTGATGCCACTG +
Preference number: 6 (lower is better)
Translates to: PLLLCSRPLLAG*QRLQLVGVMPL
Trigger: CAGTGGCATCACGCCCACCAGCTGAAGGCGTTGGCAGCCAGCAAGCAGGGGTCTGCTACAAAGCAGCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp TGGCGGGCCCCAGGGCAGCATTGCTGCTGGACGTCATaGTTGACAGTAAGGCATTGGGAGAGCCTCGGAGAG +
Preference number: 6 (lower is better)
Translates to: WRAPGQHCCWTS*LTVRHWESLGE
Trigger: CTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp GAAGAATGGTCAGGCTGCTGCTGCTGTTGCTGCTGCTaGTGCTGCAGCTGCAAGGTGGCAGTGGCCGTGGAG +
Preference number: 6 (lower is better)
Translates to: EEWSGCCCCCCC*CCSCKVAVAVE
Trigger: CTCCACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 72 bp CGGGCCCCAGGGCAGCATTGCTGCTGGACGTCATGCTaGACAGTAAGGCATTGGGAGAGCCTCGGAGAGTGC +
Preference number: 6 (lower is better)
Translates to: RAPGQHCCWTSC*TVRHWESLGEC
Trigger: GCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp CCGACAGCAGCAGCGCTCAGCTCCTGTCCGCACCTCTaGGTAGCAACCTGTCACCAACACATCTGGTCACGC +
Preference number: 6 (lower is better)
Translates to: PTAAALSSCPHL*VATCHQHIWSR
Trigger: GCGTGACCAGATGTGTTGGTGACAGGTTGCTACTCAGAGGTGCGGACAGGAGCTGAGCGCTGCTGCTGTCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468306.1
CDS GCA 72 bp GAGCATAGGGCATGGCGGGCCCCAGGGCAGCATTGCTaGTGGACGTCATGCTTGACAGTAAGGCATTGGGAG +
Preference number: 6 (lower is better)
Translates to: EHRAWRAPGQHC*WTSCLTVRHWE
Trigger: CTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCATGCCCTATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp CAGGAGCATAGGGCATGGCGGGCCCCAGGGCAGCATTaGTGCTGGACGTCATGCTTGACAGTAAGGCATTGG +
Preference number: 6 (lower is better)
Translates to: QEHRAWRAPGQH*CWTSCLTVRHW
Trigger: CCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCATGCCCTATGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp CATAGGGCATGGCGGGCCCCAGGGCAGCATTGCTGCTaGACGTCATGCTTGACAGTAAGGCATTGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: HRAWRAPGQHCC*TSCLTVRHWES
Trigger: GCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGGGCCCGCCATGCCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp GCTGGCTCGGAGGGTCCTACGCCCACGGAGTCTCGCTaGTTGCTAGCACAGCAGTCAGATCAAACTGCAAGG +
Preference number: 6 (lower is better)
Translates to: AGSEGPTPTESR*LLAQQSDQTAR
Trigger: CCTTGCAGTTTGATCTGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGGCGTAGGACCCTCCGAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358892.7
CDS GCA 72 bp GGCTCCGTGGCTCCTGGGCTGGAGCTTGCCATCCCCTaGTGCATGATCATGCTCAGGGTTTTGGATGAGTTG +
Preference number: 6 (lower is better)
Translates to: GSVAPGLELAIP*CMIMLRVLDEL
Trigger: CAACTCATCCAAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAGCTCCAGCCCAGGAGCCACGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp AATGAAGAATGGTCAGGCTGCTGCTGCTGTTGCTGCTaGTGCTGCTGCAGCTGCAAGGTGGCAGTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: NEEWSGCCCCCC*CCCSCKVAVAV
Trigger: CACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp AGGAATGAAGAATGGTCAGGCTGCTGCTGCTGTTGCTaGTGCTGCTGCTGCAGCTGCAAGGTGGCAGTGGCC +
Preference number: 6 (lower is better)
Translates to: RNEEWSGCCCCC*CCCCSCKVAVA
Trigger: GGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp TGCCTTGGCCAGACTATACCCACAGGAGTCTGGGCATaGCAGTCTCAGGGAGACCCAGACAGACTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: CLGQTIPTGVWA*QSQGDPDRLAA
Trigger: TGCAGCCAGTCTGTCTGGGTCTCCCTGAGACTGGCATGCCCAGACTCCTGTGGGTATAGTCTGGCCAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS CAA 72 bp TTGGGAGAGCCTCGGAGAGTGCTACCCGACAAGGTATaGGACGACATGCAGGACACCATGAGGCTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: LGEPRRVLPDKV*DDMQDTMRLWG
Trigger: CCCCCAGAGCCTCATGGTGTCCTGCATGTCGTCCAATACCTTGTCGGGTAGCACTCTCCGAGGCTCTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 90 bp AGTAAGGCATTGGGAGAGCCTCGGAGAGTGCTACCCGACAAGGTATaGGACGACATGCAGGACACCATGAGGCTCTGGGGGCTGAATGGG +
Preference number: 6 (lower is better)
Translates to: SKALGEPRRVLPDKV*DDMQDTMRLWGLNG
Trigger: CCCATTCAGCCCCCAGAGCCTCATGGTGTCCTGCATGTCGTCCAATACCTTGTCGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 90 bp CCCAGGGCAGCATTGCTGCTGGACGTCATGCTTGACAGTAAGGCATaGGGAGAGCCTCGGAGAGTGCTACCCGACAAGGTATTGGACGAC +
Preference number: 6 (lower is better)
Translates to: PRAALLLDVMLDSKA*GEPRRVLPDKVLDD
Trigger: GTCGTCCAATACCTTGTCGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp TCCGTGGCTCCTGGGCTGGAGCTTGCCATCCCCTGCTaGATGATCATGCTCAGGGTTTTGGATGAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: SVAPGLELAIPC*MIMLRVLDELL
Trigger: CAGCAACTCATCCAAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAGCTCCAGCCCAGGAGCCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp ATGCTGGGGCTTCACCGAGCTAGCTGCAGAAGTCCATaGAAACAGATGGCAACAGCCCTGTCTGGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: MLGLHRASCRSP*KQMATALSGQS
Trigger: GCTCTGCCCAGACAGGGCTGTTGCCATCTGTTTGCATGGACTTCTGCAGCTAGCTCGGTGAAGCCCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683696.1
CDS CAA 72 bp GGCAGAGCGACAGGGAGCATGGCCTGGACCTGGCTCTaGGACTGTGCCATTGAAGAACTCGGTGACACTATC +
Preference number: 6 (lower is better)
Translates to: GRATGSMAWTWL*DCAIEELGDTI
Trigger: GATAGTGTCACCGAGTTCTTCAATGGCACAGTCCAAGAGCCAGGTCCAGGCCATGCTCCCTGTCGCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 90 bp GGACGGCCCAGGGTTGCTGGCAGGCAGAGCAGACATCAGGTGTCCTaGAGGGGTTTTGATGGTAGAGGACATGAGGTTGGCAAGAATGGA +
Preference number: 6 (lower is better)
Translates to: GRPRVAGRQSRHQVS*RGFDGRGHEVGKNG
Trigger: TCCATTCTTGCCAACCTCATGTCCTCTACCATCAAAACCCCTCAAGGACACCTGATGTCTGCTCTGCCTGCCAGCAACCCTGGGCCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp AGAAGGAATGAAGAATGGTCAGGCTGCTGCTGCTGTTaGTGCTGCTGCTGCTGCAGCTGCAAGGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: RRNEEWSGCCCC*CCCCCSCKVAV
Trigger: CACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp TGCTGCAGAAGGAATGAAGAATGGTCAGGCTGCTGCTaGTGTTGCTGCTGCTGCTGCTGCAGCTGCAAGGTG +
Preference number: 6 (lower is better)
Translates to: CCRRNEEWSGCC*CCCCCCCSCKV
Trigger: CACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp GTTCCCGTGTTGATGCTGGGGCTTCACCGAGCTAGCTaGAGAAGTCCATGCAAACAGATGGCAACAGCCCTG +
Preference number: 6 (lower is better)
Translates to: VPVLMLGLHRAS*RSPCKQMATAL
Trigger: CAGGGCTGTTGCCATCTGTTTGCATGGACTTCTGCAGCTAGCTCGGTGAAGCCCCAGCATCAACACGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683696.1
CDS CCA 72 bp GCAGAGCGACAGGGAGCATGGCCTGGACCTGGCTCTTaGACTGTGCCATTGAAGAACTCGGTGACACTATCT +
Preference number: 6 (lower is better)
Translates to: AERQGAWPGPGS*TVPLKNSVTLS
Trigger: AGATAGTGTCACCGAGTTCTTCAATGGCACAGTCCAAGAGCCAGGTCCAGGCCATGCTCCCTGTCGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 90 bp GAGCGACAGGGAGCATGGCCTGGACCTGGCTCTTGGACTGTGCCATaGAAGAACTCGGTGACACTATCTGCTTACTGGTGGAAGGAATCG +
Preference number: 6 (lower is better)
Translates to: ERQGAWPGPGSWTVP*KNSVTLSAYWWKES
Trigger: CGATTCCTTCCACCAGTAAGCAGATAGTGTCACCGAGTTCTTCAATGGCACAGTCCAAGAGCCAGGTCCAGGCCATGCTCCCTGTCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp GGAGGGACCTGCAGTTCTGCACAAGCAGTACTAGGATaGGCACCTGGGCCCATTGCAAGGGTGACATCTTCA +
Preference number: 6 (lower is better)
Translates to: GGTCSSAQAVLG*APGPIARVTSS
Trigger: TGAAGATGTCACCCTTGCAATGGGCCCAGGTGCTCATCCTAGTACTGCTTGTGCAGAACTGCAGGTCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp GAAGGCTTGGGAGTTGTGCTTAGGGTTGCCTGGGGATaGTCTAAAACCAGTGGCTCTTCTGGCTTCGTCCCC +
Preference number: 6 (lower is better)
Translates to: EGLGVVLRVAWG*SKTSGSSGFVP
Trigger: GGGGACGAAGCCAGAAGAGCCACTGGTTTTAGATCATCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp TCCTTGCTGGAAGCCAGGCTCTCCAAGTGTGACATCTaGACCGAAGGCTTGGGAGTTGTGCTTAGGGTTGCC +
Preference number: 6 (lower is better)
Translates to: SLLEARLSKCDI*TEGLGVVLRVA
Trigger: GGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGTCACACTTGGAGAGCCTGGCTTCCAGCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp GGGTTGCTGGCAGGCAGAGCAGACATCAGGTGTCCTTaGGGGGTTTTGATGGTAGAGGACATGAGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: GLLAGRADIRCP*GVLMVEDMRLA
Trigger: TGCCAACCTCATGTCCTCTACCATCAAAACCCCTCAAGGACACCTGATGTCTGCTCTGCCTGCCAGCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp ATCTGCTGCAGAAGGAATGAAGAATGGTCAGGCTGCTaGTGCTGTTGCTGCTGCTGCTGCTGCAGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: ICCRRNEEWSGC*CCCCCCCCSCK
Trigger: CTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCAGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp ATCATCTGCTGCAGAAGGAATGAAGAATGGTCAGGCTaGTGCTGCTGTTGCTGCTGCTGCTGCTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: IICCRRNEEWSG*CCCCCCCCCSC
Trigger: GCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCAGATGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp TTTGCTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTaGCTTAGAAGATTACTGGTGGGAGTGAGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: FACCCCCCCCCC*LRRLLVGVRLR
Trigger: CCGAAGCCTCACTCCCACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp AAAATGGGACAAGGGCTTGGTGTTGCCAAAAGTAAATaGCTCCGTGGCTCCTGGGCTGGAGCTTGCCATCCC +
Preference number: 6 (lower is better)
Translates to: KMGQGLGVAKSK*LRGSWAGACHP
Trigger: GGGATGGCAAGCTCCAGCCCAGGAGCCACGGAGCCATTTACTTTTGGCAACACCAAGCCCTTGTCCCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp GGTTGCTGCATCATCTGCTGCAGAAGGAATGAAGAATaGTCAGGCTGCTGCTGCTGTTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GCCIICCRRNEE*SGCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACCATTCTTCATTCCTTCTGCAGCAGATGATGCAGCAACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp AAGGAGGGAGGTGACAGTCCTATGCTAACTCTGCCTTaGCCAGACTATACCCACAGGAGTCTGGGCATGCCA +
Preference number: 6 (lower is better)
Translates to: KEGGDSPMLTLP*PDYTHRSLGMP
Trigger: TGGCATGCCCAGACTCCTGTGGGTATAGTCTGGCCAAGGCAGAGTTAGCATAGGACTGTCACCTCCCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS CAA 72 bp GCATTGCTGCTGGACGTCATGCTTGACAGTAAGGCATaGGGAGAGCCTCGGAGAGTGCTACCCGACAAGGTA +
Preference number: 6 (lower is better)
Translates to: ALLLDVMLDSKA*GEPRRVLPDKV
Trigger: TACCTTGTCGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 72 bp AGGGTTGCTGGCAGGCAGAGCAGACATCAGGTGTCCTaGAGGGGTTTTGATGGTAGAGGACATGAGGTTGGC +
Preference number: 6 (lower is better)
Translates to: RVAGRQSRHQVS*RGFDGRGHEVG
Trigger: GCCAACCTCATGTCCTCTACCATCAAAACCCCTCAAGGACACCTGATGTCTGCTCTGCCTGCCAGCAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 72 bp CCCGGCTCAGAAACAAAATGGGACAAGGGCTTGGTGTaGCCAAAAGTAAATGGCTCCGTGGCTCCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: PGSETKWDKGLV*PKVNGSVAPGL
Trigger: CAGCCCAGGAGCCACGGAGCCATTTACTTTTGGCAACACCAAGCCCTTGTCCCATTTTGTTTCTGAGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 90 bp GTCTCCAGGCTGAGGATCTTGCCTGCTAGTGAAAGAGTTCCCGTGTaGATGCTGGGGCTTCACCGAGCTAGCTGCAGAAGTCCATGCAAA +
Preference number: 6 (lower is better)
Translates to: VSRLRILPASERVPV*MLGLHRASCRSPCK
Trigger: TTTGCATGGACTTCTGCAGCTAGCTCGGTGAAGCCCCAGCATCAACACGGGAACTCTTTCACTAGCAGGCAAGATCCTCAGCCTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683696.1
CDS TCA 72 bp TGCATTCTGCCGTTCAGGGGTCATTGCCATAAGACCTaGTCTCTGTTCCTCTTGCTGTCTGGGCAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: CILPFRGHCHKT*SLFLLLSGQSR
Trigger: CCTGCTCTGCCCAGACAGCAAGAGGAACAGAGATCAGGTCTTATGGCAATGACCCCTGAACGGCAGAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432680.7
ENST00000682016.1
CDS TCA 72 bp GGGATTGGACTTCAAACTACCCAGACAAAGAATGGCTaGGCAAGCCAAGGATGCTGTGGCTGGGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: GIGLQTTQTKNG*ASQGCCGWGRA
Trigger: TGCTCTGCCCCAGCCACAGCATCCTTGGCTTGCTCAGCCATTCTTTGTCTGGGTAGTTTGAAGTCCAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS GCA 72 bp TGCTTGACAGTAAGGCATTGGGAGAGCCTCGGAGAGTaGTACCCGACAAGGTATTGGACGACATGCAGGACA +
Preference number: 6 (lower is better)
Translates to: CLTVRHWESLGE*YPTRYWTTCRT
Trigger: TGTCCTGCATGTCGTCCAATACCTTGTCGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp GGCATGCCAGTCTCAGGGAGACCCAGACAGACTGGCTaGATTCAGAGGATGGTAAGTAATGAGAGTGGGGAT +
Preference number: 6 (lower is better)
Translates to: GMPVSGRPRQTG*IQRMVSNESGD
Trigger: ATCCCCACTCTCATTACTTACCATCCTCTGAATGCAGCCAGTCTGTCTGGGTCTCCCTGAGACTGGCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS CCA 72 bp CCAGGCTCTCCAAGTGTGACATCTGAACCGAAGGCTTaGGAGTTGTGCTTAGGGTTGCCTGGGGATGATCTA +
Preference number: 6 (lower is better)
Translates to: PGSPSVTSEPKA*ELCLGLPGDDL
Trigger: TAGATCATCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGTCACACTTGGAGAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp CATTGCTGCTGGACGTCATGCTTGACAGTAAGGCATTaGGAGAGCCTCGGAGAGTGCTACCCGACAAGGTAT +
Preference number: 6 (lower is better)
Translates to: HCCWTSCLTVRH*ESLGECYPTRY
Trigger: ATACCTTGTCGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp AGTGGGGATTGGACTTCAAACTACCCAGACAAAGAATaGCTGAGCAAGCCAAGGATGCTGTGGCTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: SGDWTSNYPDKE*LSKPRMLWLGQ
Trigger: CTGCCCCAGCCACAGCATCCTTGGCTTGCTCAGCCATTCTTTGTCTGGGTAGTTTGAAGTCCAATCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS CAA 72 bp CTGAGGATCTTGCCTGCTAGTGAAAGAGTTCCCGTGTaGATGCTGGGGCTTCACCGAGCTAGCTGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: LRILPASERVPV*MLGLHRASCRS
Trigger: ACTTCTGCAGCTAGCTCGGTGAAGCCCCAGCATCAACACGGGAACTCTTTCACTAGCAGGCAAGATCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683696.1
CDS CAA 90 bp CCAAGTGTGACATCTGAACCGAAGGCTTGGGAGTTGTGCTTAGGGTaGCCTGGGGATGATCTAAAACCAGTGGCTCTTCTGGCTTCGTCC +
Preference number: 6 (lower is better)
Translates to: PSVTSEPKAWELCLG*PGDDLKPVALLASS
Trigger: GGACGAAGCCAGAAGAGCCACTGGTTTTAGATCATCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGTCACACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp ACATTTGCTTGCTGCTGCTGCTGCTGCTGCTGCTGTTaGTGGCTTAGAAGATTACTGGTGGGAGTGAGGCTT +
Preference number: 6 (lower is better)
Translates to: TFACCCCCCCCC*WLRRLLVGVRL
Trigger: AAGCCTCACTCCCACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp CACTCCCATAGCCGCAGGGCTAGGATTTATTGTCAATaGAGGGACCTGCAGTTCTGCACAAGCAGTACTAGG +
Preference number: 6 (lower is better)
Translates to: HSHSRRARIYCQ*RDLQFCTSSTR
Trigger: CCTAGTACTGCTTGTGCAGAACTGCAGGTCCCTCCATTGACAATAAATCCTAGCCCTGCGGCTATGGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 90 bp AAGCCAGGCTCTCCAAGTGTGACATCTGAACCGAAGGCTTGGGAGTaGTGCTTAGGGTTGCCTGGGGATGATCTAAAACCAGTGGCTCTT +
Preference number: 6 (lower is better)
Translates to: KPGSPSVTSEPKAWE*CLGLPGDDLKPVAL
Trigger: AAGAGCCACTGGTTTTAGATCATCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGTCACACTTGGAGAGCCTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 90 bp GGGCTGGAGCTTGCCATCCCCTGCTGCATGATCATGCTCAGGGTTTaGGATGAGTTGCTGCTTATGGGCTTAAAGATCACATTTGCTTGC +
Preference number: 6 (lower is better)
Translates to: GLELAIPCCMIMLRV*DELLLMGLKITFAC
Trigger: GCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTCATCCAAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAGCTCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp TGCACAAGCAGTACTAGGATGAGCACCTGGGCCCATTaGAAGGGTGACATCTTCAAGGCAAGGCCTCTTAAT +
Preference number: 6 (lower is better)
Translates to: CTSSTRMSTWAH*KGDIFKARPLN
Trigger: ATTAAGAGGCCTTGCCTTGAAGATGTCACCCTTGCAATGGGCCCAGGTGCTCATCCTAGTACTGCTTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp GCTAGGATTTATTGTCAATGGAGGGACCTGCAGTTCTaGACAAGCAGTACTAGGATGAGCACCTGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: ARIYCQWRDLQF*TSSTRMSTWAH
Trigger: ATGGGCCCAGGTGCTCATCCTAGTACTGCTTGTGCAGAACTGCAGGTCCCTCCATTGACAATAAATCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp AAGATCACATTTGCTTGCTGCTGCTGCTGCTGCTGCTaGTGTTGCTGGCTTAGAAGATTACTGGTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: KITFACCCCCCC*CCWLRRLLVGV
Trigger: CACTCCCACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp GAGTTGCTGCTTATGGGCTTAAAGATCACATTTGCTTaGTGCTGCTGCTGCTGCTGCTGCTGTTGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: ELLLMGLKITFA*CCCCCCCCCWL
Trigger: AAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 72 bp ACATCTGAACCGAAGGCTTGGGAGTTGTGCTTAGGGTaGCCTGGGGATGATCTAAAACCAGTGGCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: TSEPKAWELCLG*PGDDLKPVALL
Trigger: CAGAAGAGCCACTGGTTTTAGATCATCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 90 bp CTTGCCATCCCCTGCTGCATGATCATGCTCAGGGTTTTGGATGAGTaGCTGCTTATGGGCTTAAAGATCACATTTGCTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LAIPCCMIMLRVLDE*LLMGLKITFACCCC
Trigger: GCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTCATCCAAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp CTTGCAGGCTTTGTCTACATGAGTAATGTTAGACGGTaGCACGTCTCCAGGCTGAGGATCTTGCCTGCTAGT +
Preference number: 6 (lower is better)
Translates to: LAGFVYMSNVRR*HVSRLRILPAS
Trigger: ACTAGCAGGCAAGATCCTCAGCCTGGAGACGTGTCACCGTCTAACATTACTCATGTAGACAAAGCCTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370401.7
ENST00000426613.5
ENST00000682253.1
ENST00000683696.1
CDS GCA 72 bp GGCTTAAAGATCACATTTGCTTGCTGCTGCTGCTGCTaGTGCTGCTGTTGCTGGCTTAGAAGATTACTGGTG +
Preference number: 6 (lower is better)
Translates to: GLKITFACCCCC*CCCCWLRRLLV
Trigger: CACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp CTGCTTATGGGCTTAAAGATCACATTTGCTTGCTGCTaGTGCTGCTGCTGCTGCTGTTGCTGGCTTAGAAGA +
Preference number: 6 (lower is better)
Translates to: LLMGLKITFACC*CCCCCCCWLRR
Trigger: TCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp TTGCTGCTTATGGGCTTAAAGATCACATTTGCTTGCTaGTGCTGCTGCTGCTGCTGCTGTTGCTGGCTTAGA +
Preference number: 6 (lower is better)
Translates to: LLLMGLKITFAC*CCCCCCCCWLR
Trigger: TCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 72 bp TCTCCAAGTGTGACATCTGAACCGAAGGCTTGGGAGTaGTGCTTAGGGTTGCCTGGGGATGATCTAAAACCA +
Preference number: 6 (lower is better)
Translates to: SPSVTSEPKAWE*CLGLPGDDLKP
Trigger: TGGTTTTAGATCATCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGTCACACTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 72 bp ATCAGCCATGTCTGGAAACTGGAAGTGGTCTTCTTCTaGTCTCCTCTTAACAGTTCCCTTGGCTGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: ISHVWKLEVVFF*SPLNSSLGCSA
Trigger: TGCGGAGCAGCCAAGGGAACTGTTAAGAGGAGACAAGAAGAAGACCACTTCCAGTTTCCAGACATGGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468306.1
CDS CAA 90 bp CCCACTTCTGTAGTCTGTGGTACTACAAATGGTGAGCCCATGATGTaGCCATTCATAGGGTTATTCTCCAGCAGTAATGACTGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: PTSVVCGTTNGEPMM*PFIGLFSSSNDWPA
Trigger: GGCTGGCCAGTCATTACTGCTGGAGAATAACCCTATGAATGGCAACATCATGGGCTCACCATTTGTAGTACCACAGACTACAGAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp ATAGCTGATCCCTGTGGAGGAGGATGGGATCTGAAGTaGCATGCCAGTAACTTGGCTGCAACTAGAAGCAAA +
Preference number: 6 (lower is better)
Translates to: IADPCGGGWDLK*HASNLAATRSK
Trigger: TTTGCTTCTAGTTGCAGCCAAGTTACTGGCATGTCACTTCAGATCCCATCCTCCTCCACAGGGATCAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp ACACTATCTGCTTACTGGTGGAAGGAATCGAATAGCTaGTCCCTGTGGAGGAGGATGGGATCTGAAGTGACA +
Preference number: 6 (lower is better)
Translates to: TLSAYWWKESNS*SLWRRMGSEVT
Trigger: TGTCACTTCAGATCCCATCCTCCTCCACAGGGATCAGCTATTCGATTCCTTCCACCAGTAAGCAGATAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp TTAAAGATCACATTTGCTTGCTGCTGCTGCTGCTGCTaGTGCTGTTGCTGGCTTAGAAGATTACTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: LKITFACCCCCC*CCCWLRRLLVG
Trigger: TCCCACCAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp ATGGGCTTAAAGATCACATTTGCTTGCTGCTGCTGCTaGTGCTGCTGCTGTTGCTGGCTTAGAAGATTACTG +
Preference number: 6 (lower is better)
Translates to: MGLKITFACCCC*CCCCCWLRRLL
Trigger: CAGTAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp GACGGCTTCAAATGGACTCATCTGTTGGGAGATATATaGATTCTGCCGTTCAGGGGTCATTGCCATAAGACC +
Preference number: 6 (lower is better)
Translates to: DGFKWTHLLGDI*ILPFRGHCHKT
Trigger: GGTCTTATGGCAATGACCCCTGAACGGCAGAATGCATATATCTCCCAACAGATGAGTCCATTTGAAGCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000464149.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp GGATGTCCATCTGCTCAGGATGGGTCAGCAGTGAGATaGGGTCACCAAAAGAACAAATGTAACATTAGGCTG +
Preference number: 6 (lower is better)
Translates to: GCPSAQDGSAVR*GHQKNKCNIRL
Trigger: CAGCCTAATGTTACATTTGTTCTTTTGGTGACCGCATCTCACTGCTGACCCATCCTGAGCAGATGGACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS CAA 72 bp CTTGCCATCCCCTGCTGCATGATCATGCTCAGGGTTTaGGATGAGTTGCTGCTTATGGGCTTAAAGATCACA +
Preference number: 6 (lower is better)
Translates to: LAIPCCMIMLRV*DELLLMGLKIT
Trigger: TGTGATCTTTAAGCCCATAAGCAGCAACTCATCCAAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp GATCTAGCTCATTTGGAGAAGGGTCTTGAATTTTGGTaGGCTCCTCTAGCAGCTCTTGAAGCTCCTGGTCTA +
Preference number: 6 (lower is better)
Translates to: DLAHLEKGLEFW*APLAALEAPGL
Trigger: TAGACCAGGAGCTTCAAGAGCTGCTAGAGGAGCTCACCAAAATTCAAGACCCTTCTCCAAATGAGCTAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp CATCCCCTGCTGCATGATCATGCTCAGGGTTTTGGATaGGTTGCTGCTTATGGGCTTAAAGATCACATTTGC +
Preference number: 6 (lower is better)
Translates to: HPLLHDHAQGFG*VAAYGLKDHIC
Trigger: GCAAATGTGATCTTTAAGCCCATAAGCAGCAACTCATCCAAAACCCTGAGCATGATCATGCAGCAGGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp GCATTAATAGAAGCAGAGTATGTAGAAGGAGGGAGGTaGCAGTCCTATGCTAACTCTGCCTTGGCCAGACTA +
Preference number: 6 (lower is better)
Translates to: ALIEAEYVEGGR*QSYANSALARL
Trigger: TAGTCTGGCCAAGGCAGAGTTAGCATAGGACTGTCACCTCCCTCCTTCTACATACTCTGCTTCTATTAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS GCA 72 bp CTTATGGGCTTAAAGATCACATTTGCTTGCTGCTGCTaGTGCTGCTGCTGCTGTTGCTGGCTTAGAAGATTA +
Preference number: 6 (lower is better)
Translates to: LMGLKITFACCC*CCCCCCWLRRL
Trigger: TAATCTTCTAAGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CAA 72 bp CGATTTCCCACCATGGCGAAATGGGGAAGCATGCTCTaGATTACAAGCCGACTTTTCCAGTCATCCATTGTT +
Preference number: 6 (lower is better)
Translates to: RFPTMAKWGSML*ITSRLFQSSIV
Trigger: AACAATGGATGACTGGAAAAGTCGGCTTGTAATCAAGAGCATGCTTCCCCATTTCGCCATGGTGGGAAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
CDS CAA 72 bp GACTTGTTCTTGGACGGCTTCAAATGGACTCATCTGTaGGGAGATATATGCATTCTGCCGTTCAGGGGTCAT +
Preference number: 6 (lower is better)
Translates to: DLFLDGFKWTHL*GDICILPFRGH
Trigger: ATGACCCCTGAACGGCAGAATGCATATATCTCCCAACAGATGAGTCCATTTGAAGCCGTCCAAGAACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000464149.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp GATTTCCCACCATGGCGAAATGGGGAAGCATGCTCTTaGTTACAAGCCGACTTTTCCAGTCATCCATTGTTT +
Preference number: 6 (lower is better)
Translates to: DFPPWRNGEACS*LQADFSSHPLF
Trigger: AAACAATGGATGACTGGAAAAGTCGGCTTGTAATCAAGAGCATGCTTCCCCATTTCGCCATGGTGGGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
CDS TCA 72 bp CAGTCCCACTTCTGTAGTCTGTGGTACTACAAATGGTaGGCCCATGATGTTGCCATTCATAGGGTTATTCTC +
Preference number: 6 (lower is better)
Translates to: QSHFCSLWYYKW*AHDVAIHRVIL
Trigger: GAGAATAACCCTATGAATGGCAACATCATGGGCTCACCATTTGTAGTACCACAGACTACAGAAGTGGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000468306.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS GCA 72 bp TCAAATGGACTCATCTGTTGGGAGATATATGCATTCTaGCGTTCAGGGGTCATTGCCATAAGACCTGATCTC +
Preference number: 6 (lower is better)
Translates to: SNGLICWEIYAF*RSGVIAIRPDL
Trigger: GAGATCAGGTCTTATGGCAATGACCCCTGAACGGCAGAATGCATATATCTCCCAACAGATGAGTCCATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000464149.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS CCA 72 bp ACTTGTTCTTGGACGGCTTCAAATGGACTCATCTGTTaGGAGATATATGCATTCTGCCGTTCAGGGGTCATT +
Preference number: 6 (lower is better)
Translates to: TCSWTASNGLIC*EIYAFCRSGVI
Trigger: AATGACCCCTGAACGGCAGAATGCATATATCTCCCAACAGATGAGTCCATTTGAAGCCGTCCAAGAACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262858.8
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000464149.1
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
ENST00000683696.1
CDS TCA 72 bp ATTTTGGATGTCCATCTGCTCAGGATGGGTCAGCAGTaGGATGCGGTCACCAAAAGAACAAATGTAACATTA +
Preference number: 6 (lower is better)
Translates to: ILDVHLLRMGQQ*DAVTKRTNVTL
Trigger: TAATGTTACATTTGTTCTTTTGGTGACCGCATCTCACTGCTGACCCATCCTGAGCAGATGGACATCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464149.1
CDS CAA 90 bp AAGCATGCTCTTGATTACAAGCCGACTTTTCCAGTCATCCATTGTTaGACCTGCAAATTTATTCTTGACTCTCCAAGGCGTTTCCCAAAC +
Preference number: 6 (lower is better)
Translates to: KHALDYKPTFPVIHC*TCKFILDSPRRFPN
Trigger: GTTTGGGAAACGCCTTGGAGAGTCAAGAATAAATTTGCAGGTCAAACAATGGATGACTGGAAAAGTCGGCTTGTAATCAAGAGCATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262858.8
ENST00000358892.7
ENST00000370401.7
ENST00000426613.5
ENST00000432680.7
ENST00000682016.1
ENST00000682253.1
ENST00000683453.1
CDS GCA 72 bp GATGCGGTCACCAAAAGAACAAATGTAACATTAGGCTaGATTAATAGAAGCAGAGTATGTAGAAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: DAVTKRTNVTLG*INRSRVCRRRE
Trigger: CTCCCTCCTTCTACATACTCTGCTTCTATTAATGCAGCCTAATGTTACATTTGTTCTTTTGGTGACCGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464149.1