RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAML1 (Homo sapiens)

Ensembl gene IDs: ENSG00000161021

Ensembl transcript IDs: ENST00000292599.4, ENST00000507385.1, ENST00000511027.1, ENST00000638220.2, ENST00000639666.1, ENST00000640191.1

Found 654 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTaGTGGCCTGAGGGGCGCAGCCACAGACCCTGCCCAGGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: TDASRWAGASPMDLN*WPEGRSHRPCPGPG
Trigger: GCCTGGCCCTGGGCAGGGTCTGTGGCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 90 bp CAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATaGACCTCAACTGCTGGCCTGAGGGGCGCAGCCACAGACCCTGCC +
Preference number: 1 (lower is better)
Translates to: QHQVLMPADGLGPAR*TSTAGLRGAATDPA
Trigger: GGCAGGGTCTGTGGCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATaGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGG +
Preference number: 1 (lower is better)
Translates to: EPYPAVPTPGTDASR*AGASPMDLNCWPEG
Trigger: CCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 90 bp GGGTCCTGCTGCCAGGACATGGGAGGAAGGGATTCCTGGGGGCCTTaGGAGGGAGGAGGAGGAGCTGCTAGGAAGACCCTAGCTGTGTCA +
Preference number: 1 (lower is better)
Translates to: GSCCQDMGGRDSWGP*EGGGGAARKTLAVS
Trigger: TGACACAGCTAGGGTCTTCCTAGCAGCTCCTCCTCCTCCCTCCCAAGGCCCCCAGGAATCCCTTCCTCCCATGTCCTGGCAGCAGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 90 bp TGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAGGAAGGGATTCCTaGGGGCCTTGGGAGGGAGGAGGAGGAGCTGCTAGGAAGACCCTA +
Preference number: 1 (lower is better)
Translates to: CSLGSCCQDMGGRDS*GPWEGGGGAARKTL
Trigger: TAGGGTCTTCCTAGCAGCTCCTCCTCCTCCCTCCCAAGGCCCCCAGGAATCCCTTCCTCCCATGTCCTGGCAGCAGGACCCCAGGCTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 90 bp CTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATGTAGCCTaGGGTCCTGCTGCCAGGACATGGGAGGAAGGGATTCCTGGGGGC +
Preference number: 1 (lower is better)
Translates to: LQDTGPPHLYLPYVA*GPAARTWEEGIPGG
Trigger: GCCCCCAGGAATCCCTTCCTCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR TCA 90 bp AAAACCACCTTTAGAACCCTATCCTGCTGTCCCAACACCAGGTACTaGTGCCAGCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTG +
Preference number: 1 (lower is better)
Translates to: KTTFRTLSCCPNTRY*CQQMGWGQPDGPQL
Trigger: CAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTCTAAAGGTGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATaGGCAACATACATGTTCAGAGAAAACTGCAGAAGGTGGGGAGAC +
Preference number: 1 (lower is better)
Translates to: GKTSVHNCTVTTLPP*ATYMFRENCRRWGD
Trigger: GTCTCCCCACCTTCTGCAGTTTTCTCTGAACATGTATGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR GCA 90 bp GCAGACAGAAAGGCCAACGGTAAAGGAAAGACATCTGTGCACAACTaGACAGTGACCACGCTCCCACCATGGGCAACATACATGTTCAGA +
Preference number: 1 (lower is better)
Translates to: ADRKANGKGKTSVHN*TVTTLPPWATYMFR
Trigger: TCTGAACATGTATGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCCTTTACCGTTGGCCTTTCTGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 90 bp CTCCCACCATGGGCAACATACATGTTCAGAGAAAACTGCAGAAGGTaGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTAC +
Preference number: 1 (lower is better)
Translates to: LPPWATYMFRENCRR*GDIILQDTGPPHLY
Trigger: GTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTTTTCTCTGAACATGTATGTTGCCCATGGTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR TCA 90 bp GAAAGGCCAACGGTAAAGGAAAGACATCTGTGCACAACTGCACAGTaGCCACGCTCCCACCATGGGCAACATACATGTTCAGAGAAAACT +
Preference number: 1 (lower is better)
Translates to: ERPTVKERHLCTTAQ*PRSHHGQHTCSEKT
Trigger: AGTTTTCTCTGAACATGTATGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCCTTTACCGTTGGCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 90 bp GGCATACGCAGTCAACAGCCTGCACTTAGGGAAATAATTTTCCAGTaGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAACAAAAA +
Preference number: 1 (lower is better)
Translates to: GIRSQQPALREIIFQ*PPSPLKADKEQKQK
Trigger: TTTTTGTTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTCCCTAAGTGCAGGCTGTTGACTGCGTATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR TCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCCTCAACTGCTGGCCTaGGGGGCGCAGCCACAGACC +
Preference number: 2 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRPQLLA*GAQPQT
Trigger: GGTCTGTGGCTGCGCCCCTCAGGCCAGCAGTTGAGG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR TCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACCCAACACCAGGTACTaGTGCCAGCAGATGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGPNTRY*CQQMGW
Trigger: CCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCTGGGGCCAGCCCGATaGACCTCAACTGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFLGPAR*TSTAGL
Trigger: CAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGGCCTCCTTCTCCCCTaGAAGCTGACAAAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEGLLLP*KLTKSR
Trigger: TCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTAGCTTGGGCTCTACCTaGCCAGCTCCCCAGGCCATG +
Preference number: 2 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFSLGST*PAPQAM
Trigger: CATGGCCTGGGGAGCTGGGCAGGTAGAGCCCAAGCT...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTATGGACCTCAACTGCTaGCCTGAGGGGCGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFMDLNC*PEGRSH
Trigger: GTGGCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCAT...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACCTGCTGCCAGGACATaGGAGGAAGGGATTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATPAART*EEGIPG
Trigger: CCCAGGAATCCCTTCCTCCCATGTCCTGGCAGCAGG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR TCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCCTCAACTGCTGGCCTaGGGGGCGCAGCCACAGACC +
Preference number: 2 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYPQLLA*GAQPQT
Trigger: GGTCTGTGGCTGCGCCCCTCAGGCCAGCAGTTGAGG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCATGGACCTCAACTGCTaGCCTGAGGGGCGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRMDLNC*PEGRSH
Trigger: GTGGCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCAT...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR TCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAGGCCTCCTTCTCCCCTaGAAGCTGACAAAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATGLLLP*KLTKSR
Trigger: TCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCC...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCCGATGGACCTCAACTaGTGGCCTGAGGGGCGCAGC +
Preference number: 2 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYPMDLN*WPEGRS
Trigger: GCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGGCCGACATACCACTTaGGGTGGCAAATGGCTATTA +
Preference number: 2 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEGRHTT*GGKWLL
Trigger: TAATAGCCATTTGCCACCCCAAGTGGTATGTCGGCC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTGCCTCACCTGGAGCTTaGGCTCTACCTGCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFASPGA*ALPAQL
Trigger: GAGCTGGGCAGGTAGAGCCCAAGCTCCAGGTGAGGC...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCCTTCCATATGTAGCCTaGGGTCCTGCTGCCAGGACA +
Preference number: 2 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLLPYVA*GPAART
Trigger: TGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAG...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCAGACCTGCTATCCCATaGCTCCTGTCCCTTTTTGGC +
Preference number: 2 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRRPAIP*LLSLFG
Trigger: GCCAAAAAGGGACAGGAGGCATGGGATAGCAGGTCT...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCACTTGTCCCCAGCACTaGGGTAAGTGGAGCAGTCTT +
Preference number: 2 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRTCPQH*GKWSSL
Trigger: AAGACTGCTCCACTTACCCCAGTGCTGGGGACAAGT...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCCCTCCTGTCCCTTTTTaGCATACGCAGTCAACAGCC +
Preference number: 2 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLPPVPF*HTQSTA
Trigger: GGCTGTTGACTGCGTATGCCAAAAAGGGACAGGAGG...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACCAATGCCACTTAATTaGTTTAAACCATCACCTACC +
Preference number: 2 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEPMPLN*FKPSPT
Trigger: GGTAGGTGATGGTTTAAATCAATTAAGTGGCATTGG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCAGTTGTCAAACCAAGTaGAATTGCTTCCTCCGGGCC +
Preference number: 2 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRSCQTK*NCFLRA
Trigger: GGCCCGGAGGAAGCAATTCCACTTGGTTTGACAACT...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAATTGGTCCAAAGTAGTTaGTCTTTCTTTGAATCTGAG +
Preference number: 2 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGELVQSS*SFFESE
Trigger: CTCAGATTCAAAGAAAGAGCAACTACTTTGGACCAA...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTAGACCTGCTATCCCATaGCTCCTGTCCCTTTTTGGC +
Preference number: 2 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFRPAIP*LLSLFG
Trigger: GCCAAAAAGGGACAGGAGGCATGGGATAGCAGGTCT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTACATCTGTGCACAACTaGACAGTGACCACGCTCCCA +
Preference number: 2 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFTSVHN*TVTTLP
Trigger: TGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCATAAGCCCGACAGTGTaGGGTTTCACTGGTGTTACT +
Preference number: 2 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLISPTV*GFTGVT
Trigger: AGTAACACCAGTGAAACCCCACACTGTCGGGCTTAT...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGAGCTTGGGCTCTACCTaGCCAGCTCCCCAGGCCATG +
Preference number: 2 (lower is better)
Translates to: LQIILLSKVSTETCPQHWSLGST*PAPQAM
Trigger: CATGGCCTGGGGAGCTGGGCAGGTAGAGCCCAAGCT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCTTCGTTACGGGGAAGTaGTCTCTCCATCTTCGTTTT +
Preference number: 2 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRFVTGK*SLHLRF
Trigger: AAAACGAAGATGGAGAGAGCACTTCCCCGTAACGAA...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCAGGCCATGGGCTTTTaGTCCAAAGTAGTTGCTCTT +
Preference number: 2 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYQAMGF*SKVVAL
Trigger: AAGAGCAACTACTTTGGACCAAAAGCCCATGGCCTG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTATAAGCCCGACAGTGTaGGGTTTCACTGGTGTTACT +
Preference number: 2 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFISPTV*GFTGVT
Trigger: AGTAACACCAGTGAAACCCCACACTGTCGGGCTTAT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATTTAGAACCCTATCCTaGTGTCCCAACACCAGGTAC +
Preference number: 2 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKFRTLS*CPNTRY
Trigger: GTACCTGGTGTTGGGACAGCAGGATAGGGTTCTAAA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAACAGGCCATGGGCTTTTaGTCCAAAGTAGTTGCTCTT +
Preference number: 2 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKQAMGF*SKVVAL
Trigger: AAGAGCAACTACTTTGGACCAAAAGCCCATGGCCTG...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCATGAGTATTTTCCTTaGCTCAATTCTCACATAGGA +
Preference number: 2 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRHEYFP*LNSHIG
Trigger: TCCTATGTGAGAATTGAGCCAAGGAAAATACTCATG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR TCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCCAATGCCACTTAATTaGTTTAAACCATCACCTACC +
Preference number: 2 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFPMPLN*FKPSPT
Trigger: GGTAGGTGATGGTTTAAATCAATTAAGTGGCATTGG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCACCCTAGGTTTCCAATaGCACTTAATTGATTTAAAC +
Preference number: 2 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLTLGFQ*HLIDLN
Trigger: GTTTAAATCAATTAAGTGGCATTGGAAACCTAGGGT...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR GCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGTTGGTCCAAAGTAGTTaGTCTTTCTTTGAATCTGAG +
Preference number: 2 (lower is better)
Translates to: LQIILLSKVSTETCPQHWLVQSS*SFFESE
Trigger: CTCAGATTCAAAGAAAGAGCAACTACTTTGGACCAA...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 72 bp AGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTaGCCTGAGGGGCGCAGCCACAGACCCTGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: RWAGASPMDLNC*PEGRSHRPCPG
Trigger: CCCTGGGCAGGGTCTGTGGCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAGGCCTCACCTGGAGCTaGGGCTCTACCTGCCCAGCT +
Preference number: 3 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAGLTWS*GSTCPA
Trigger: AGCTGGGCAGGTAGAGCCCAAGCTCCAGGTGAGGCC...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR GCA 72 bp AGCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTaGTGGCCTGAGGGGCGCAGCCACAGACCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: SRWAGASPMDLN*WPEGRSHRPCP
Trigger: TGGGCAGGGTCTGTGGCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CCA 72 bp GTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATaGACCTCAACTGCTGGCCTGAGGGGCGCAGCCACA +
Preference number: 3 (lower is better)
Translates to: VLMPADGLGPAR*TSTAGLRGAAT
Trigger: TGTGGCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGGCCTCACCTGGAGCTaGGGCTCTACCTGCCCAGCT +
Preference number: 3 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEGLTWS*GSTCPA
Trigger: AGCTGGGCAGGTAGAGCCCAAGCTCCAGGTGAGGCC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR GCA 72 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTaGTGCCAGGACATGGGAGGAAGGGATTCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: PTSLPSICSLGS*CQDMGGRDSWG
Trigger: CCCCCAGGAATCCCTTCCTCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR GCA 72 bp CATGGGAGTGGCAGAAGTTGTCAAACCAAGTGGAATTaGTTCCTCCGGGCCGGCCTACGGCCTCCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: HGSGRSCQTKWN*FLRAGLRPPSP
Trigger: TGGGGAAGGAGGCCGTAGGCCGGCCCGGAGGAAGCAATTCCACTTGGTTTGACAACTTCTGCCACTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR TCA 72 bp TTTAGAACCCTATCCTGCTGTCCCAACACCAGGTACTaGTGCCAGCAGATGGGCTGGGGCCAGCCCGATGGA +
Preference number: 3 (lower is better)
Translates to: FRTLSCCPNTRY*CQQMGWGQPDG
Trigger: TCCATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR GCA 72 bp ACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTaGCAGGACATGGGAGGAAGGGATTCCTGGGGGCCT +
Preference number: 3 (lower is better)
Translates to: TSLPSICSLGSC*QDMGGRDSWGP
Trigger: AGGCCCCCAGGAATCCCTTCCTCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGGCCATGGGCTTTaGGTCCAAAGTAGTTGCTCT +
Preference number: 3 (lower is better)
Translates to: NPILLSQHQVLMPADGLGPGHGL*VQSSCS
Trigger: AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGG...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAATGGCCGACATACCACTaGGGGTGGCAAATGGCTATT +
Preference number: 3 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEWPTYH*GWQMAI
Trigger: AATAGCCATTTGCCACCCCAAGTGGTATGTCGGCCA...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACCTGTGCTTACCACTTaGCTTTCGTTACGGGGAAGT +
Preference number: 3 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEPVLTT*LSLRGS
Trigger: ACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAGG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCTCAAACCAAGTGGAATaGCTTCCTCCGGGCCGGCCT +
Preference number: 3 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRSNQVE*LPPGRP
Trigger: AGGCCGGCCCGGAGGAAGCAATTCCACTTGGTTTGA...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGCCTCCTGTCCCTTTTaGGCATACGCAGTCAACAGC +
Preference number: 3 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLASCPF*AYAVNS
Trigger: GCTGTTGACTGCGTATGCCAAAAAGGGACAGGAGGC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR GCA 72 bp AAGGCCAACGGTAAAGGAAAGACATCTGTGCACAACTaGACAGTGACCACGCTCCCACCATGGGCAACATAC +
Preference number: 3 (lower is better)
Translates to: KANGKGKTSVHN*TVTTLPPWATY
Trigger: GTATGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCCTTTACCGTTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGTAAGTGGAGCAGTCTaGGATAAAATCACCATGATG +
Preference number: 3 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEVSGAV*DKITMM
Trigger: CATCATGGTGATTTTATCCAAGACTGCTCCACTTAC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCCAGGCCATGGGCTTTaGGTCCAAAGTAGTTGCTCT +
Preference number: 3 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFPGHGL*VQSSCS
Trigger: AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGTAAGTGGAGCAGTCTaGGATAAAATCACCATGATG +
Preference number: 3 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLVSGAV*DKITMM
Trigger: CATCATGGTGATTTTATCCAAGACTGCTCCACTTAC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR-3UTR CAA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGTTACTGTTGGTTTTTaGGTCGTTTGGATAGAAAAC +
Preference number: 3 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFVTVGF*VVWIEN
Trigger: GTTTTCTATCCAAACGACCAAAAAACCAACAGTAAC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR TCA 72 bp TCAAAAGGAAACCCTAGGTTTCCAATGCCACTTAATTaGTTTAAACCATCACCTACCCTAATCTGTTTAAAA +
Preference number: 3 (lower is better)
Translates to: SKGNPRFPMPLN*FKPSPTLICLK
Trigger: TTTTAAACAGATTAGGGTAGGTGATGGTTTAAATCAATTAAGTGGCATTGGAAACCTAGGGTTTCCTTTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCATCCATGACCGCGCTGTaGCGCGGCAGCGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGASMTAL*RGSANS
Trigger: GGAGTTCGCGCTGCCGCGGCACAGCGCGGTCATGGA...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCATGCCATGTGGACATCTaGCCCGGGGCTGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGACHVDI*PGAGAG
Trigger: CCCGGCACCAGCCCCGGGCCAGATGTCCACATGGCA...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGAGGTGGGCAGCACCATaGGCCGCGGGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMRWAAP*AAGCTG
Trigger: GCCCGTGCAGCCCGCGGCCCATGGTGCTGCCCACCT...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCATCGCAGGTGCTGTGGTaGCGCCGGCACAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGASQVLW*RRHSSM
Trigger: CATCGAGCTGTGCCGGCGCCACCACAGCACCTGCGA...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCACGCTTGGCCTTGGCCTaGATGCAGCGCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGARLALA*MQRWCR
Trigger: CCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCG...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAGACCCAAGGTGTTCATaGCGGGCACGGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGADPRCS*RARQQR
Trigger: CCTCTGCTGCCGTGCCCGGCATGAACACCTTGGGTC...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAAGCTTGGGCTCTACCTaGCCAGCTCCCCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGASLGST*PAPQAM
Trigger: CATGGCCTGGGGAGCTGGGCAGGTAGAGCCCAAGCT...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCATGTAGCCTGGGGTCCTaGTGCCAGGACATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGACSLGS*CQDMGG
Trigger: TCCTCCCATGTCCTGGCAGCAGGACCCCAGGCTACA...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGCAAAAGGCAGCTCCTaGCCCGCGGTCCGCACAGGG +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMAKGSS*PAVRTG
Trigger: CCCTGTGCGGACCGCGGGCCAGGAGCTGCCTTTTGC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGCCGCCATGGGGCAGGTaGGCAGCACCATGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGPPWGR*AAPWAA
Trigger: CGCGGCCCATGGTGCTGCCCACCTGCCCCATGGCGG...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGCGCTTGGCCTTGGCCTaGATGCAGCGCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMRLALA*MQRWCR
Trigger: CCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCG...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCACTCCTGGGCCCTGACTaGGCAATACCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGALLGPD*AIPHLQ
Trigger: TTGCAGGTGTGGTATTGCCCAGTCAGGGCCCAGGAG...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACATCTGGCCCGGGGCTaGTGCCGGGGTGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEHLARG*CRGGLL
Trigger: CAGCAGGCCACCCCGGCACCAGCCCCGGGCCAGATG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAATAAGCCATCAGGGCTaGCTTGCTCTGGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAISHQG*LALARP
Trigger: GGGTCTGGCCAGAGCAAGCCAGCCCTGATGGCTTAT...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGACACGGCAGGCGGCTaGGTCCCAACACTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMDTAGG*VPTLVA
Trigger: GGCTACCAGTGTTGGGACCCAGCCGCCTGCCGTGTC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGAGCTGTTGTGGGAGCTaGCCACGGACACGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMSCCGS*PRTRQA
Trigger: CGCCTGCCGTGTCCGTGGCCAGCTCCCACAACAGCT...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAACACCCCGGTCCTGTTaGCCTGAGTTTGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGATPRSC*PEFVGR
Trigger: TCTCCCCACAAACTCAGGCCAACAGGACCGGGGTGT...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCACACGTTGCTGTTCCCTaGGGTCTGGCCACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAHVAVP*GLATEV
Trigger: AACCTCAGTGGCCAGACCCCAGGGAACAGCAACGTG...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGGCAGAGGACAGCTCTaGGGCCCCTCCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEGRGQL*GPSWAL
Trigger: CAGGGCCCAGGAGGGGCCTCAGAGCTGTCCTCTGCC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAATCAGATTCCCAGCCTaGGGGAACACTCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAIRFPA*GNTRGQ
Trigger: CTGTCCTCGAGTGTTCCCTCAGGCTGGGAATCTGAT...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGCTGCCCATAGGCAGCTaGGACGGAGGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMLPIGS*DGGVLA
Trigger: GGCCAGAACACCTCCGTCTCAGCTGCCTATGGGCAG...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCGGCACAGCTCGATaGGCCGGCGAAGGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGAGTAR*AGEGAP
Trigger: TGGAGCGCCTTCGCCGGCGCATCGAGCTGTGCCGGC...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGAGCGGGCCTCGCAGGTaGTGTGGTGGCGCCGGCACA +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGSGPRR*CGGAGT
Trigger: TGTGCCGGCGCCACCACAGCACCTGCGAGGCCCGCT...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGAGCGGGCCTCGCAGGTaGTGTGGTGGCGCCGGCACA +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGSGPRR*CGGAGT
Trigger: TGTGCCGGCGCCACCACAGCACCTGCGAGGCCCGCT...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAACACTCGAGGACAGCTaGAGTTGGATGGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGATLEDS*SWMDPR
Trigger: CCTTGGGTCCATCCAACTCCAGCTGTCCTCGAGTGT...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAGCCAGGTGGAACCAGTaGTCGGAAAGGCATATTTCC +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAARWNQ*SERHIS
Trigger: GGAAATATGCCTTTCCGATCACTGGTTCCACCTGGC...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGCCTCCCATGGCTGGTaGCACCCTTGGGACCGGTGG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEASHGW*HPWDRW
Trigger: CCACCGGTCCCAAGGGTGTCACCAGCCATGGGAGGC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCGGCGCTTGCTaGCTACCTCAAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGPAGAC*LPQASA
Trigger: GGCCGAGGCTTGAGGTAGGCAGCAAGCGCCGGCTGG...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACCCCCAGCCGGCGCTTaGTGCCTACCTCAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEPPAGA*CLPQAS
Trigger: CGAGGCTTGAGGTAGGCAGCAAGCGCCGGCTGGGGG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAGGCGGGTTTTCCTCCTaGCCCGCTCGGCCCGACCCC +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATGGFSS*PARPDP
Trigger: GGGGTCGGGCCGAGCGGGGCAGGAGGAAAACCCGCC...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGTCCATGACCGCGCTGTaGCGCGGCAGCGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGSMTAL*RGSANS
Trigger: GGAGTTCGCGCTGCCGCGGCACAGCGCGGTCATGGA...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGGCCCCAGAAAGGTCTaGCCTGCAGACCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEGPRKV*PADPAL
Trigger: GAGGGCCGGGTCTGCAGGGCAGACCTTTCTGGGGCC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGCTGGTAGCCTGGGCTTaGACAGGGACACTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMLVAWA*TGTLEG
Trigger: CCCTTCCAGTGTCCCTGTGCAAGCCCAGGCTACCAG...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACAGGGTAGGCCTGGGTaGAGTGCAGCCCCGCCCGAC +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGQGRPG*SAAPPD
Trigger: GTCGGGCGGGGCTGCACTGCACCCAGGCCTACCCTG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGCCTCGCAGGTGCTGTaGTGGCGCCGGCACAGCTCG +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSASQVL*WRRHSS
Trigger: CGAGCTGTGCCGGCGCCACCACAGCACCTGCGAGGC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGTGCCATGTGGACATCTaGCCCGGGGCTGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGCHVDI*PGAGAG
Trigger: CCCGGCACCAGCCCCGGGCCAGATGTCCACATGGCA...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAAGGGCTGGCTTGCTCTaGCCAGACCCCGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGERAGLL*PDPGLP
Trigger: AGGCAGCCCGGGGTCTGGCCAGAGCAAGCCAGCCCT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCACTAGACATTTTCAGGTaGGCCTGCTGCTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGALDIFR*ACCCMW
Trigger: CCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAG...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGAGCCCACTGCCACCTaGCTGCCCGCTATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMEPTAT*LPAIGK
Trigger: TTTGCCTATAGCGGGCAGCCAGGTGGCAGTGGGCTC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGGCGAAGGCGCTCCATaGCCGCGCTGTGCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFGEGAP*PRCAAA
Trigger: TGCCGCGGCACAGCGCGGTCATGGAGCGCCTTCGCC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAGGCAGAGGACAGCTCTaGGGCCCCTCCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATGRGQL*GPSWAL
Trigger: CAGGGCCCAGGAGGGGCCTCAGAGCTGTCCTCTGCC...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGGGGAGAGAGGAAACTaGAGCATGTCCAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMGERGN*SMSRAH
Trigger: ATGGGCCCTGGACATGCTTCAGTTTCCTCTCTCCCC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACCGACCGCCCATCTGTaGGGCAGGGCTCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEPTAHL*GRALAE
Trigger: TTCAGCCAGAGCCCTGCCTCACAGATGGGCGGTCGG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACCTCAACTGCTGGCCTaGGGGGCGCAGCCACAGACC +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGPQLLA*GAQPQT
Trigger: GGTCTGTGGCTGCGCCCCTCAGGCCAGCAGTTGAGG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAGAAGTGCAAGTCATCTaGCATGGGAGTGGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAEVQVI*HGSGRS
Trigger: ACTTCTGCCACTCCCATGTCAGATGACTTGCACTTC...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGGGTTCTGGAGCATCTaGTCGCGCTTCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMGFWSI*SRFCLA
Trigger: TGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGGTGCCGGGGTGGCCTaGTGTGGGTTCTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEGAGVA*CGFWSI
Trigger: GATGCTCCAGAACCCACAGCAGGCCACCCCGGCACC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGGGGCGCTGGTCCTCTaGTGTGCACTCACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEGALVL*CALTGG
Trigger: ACCCCCAGTGAGTGCACAGCAGAGGACCAGCGCCCC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCCTCTCGGGGCCGGCTaGCACTGCGGGCTTCGCTCC +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFPLGAG*HCGLRS
Trigger: GGAGCGAAGCCCGCAGTGCCAGCCGGCCCCGAGAGG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCGGCGCGCTTGGCCTTaGCCTGGATGCAGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSRRAWP*PGCSAG
Trigger: ACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGCTTCCCGGCGCGCTTaGCCTTGGCCTGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSASRRA*PWPGCS
Trigger: GCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGTGTGGAATAAGGTTTaGGAGCCCCCTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMVWNKV*EPPRLG
Trigger: CCCCAGCCTAGGGGGCTCCCAAACCTTATTCCACAC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAGGGCTGGTGCCGGGGTaGCCTGCTGTGGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGGLVPG*PAVGSG
Trigger: TCCAGAACCCACAGCAGGCCACCCCGGCACCAGCCC...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGCCGTCTGCTGCCATGTaGACATCTGGCCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGPSAAM*TSGPGL
Trigger: CAGCCCCGGGCCAGATGTCCACATGGCAGCAGACGG...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGACATCTAAGGAACTGTaGGAGGGCCCCGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMTSKEL*EGPVCC
Trigger: GCAGCAGACGGGGCCCTCCCACAGTTCCTTAGATGT...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGTCTGCCGTGGAATGTaGGCATGTCCATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMVCRGM*ACPLVA
Trigger: GGCCACCAATGGACATGCCCACATTCCACGGCAGAC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCTGGGGCAGGGGCGCTaGTCCTCTGCTGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGLGQGR*SSAVHS
Trigger: TGAGTGCACAGCAGAGGACCAGCGCCCCTGCCCCAG...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAAGTTGTCAAACCAAGTaGAATTGCTTCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGASCQTK*NCFLRA
Trigger: GGCCCGGAGGAAGCAATTCCACTTGGTTTGACAACT...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGCGGGTCAGATGGCGCTaGAACTGTTGCTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMRVRWR*NCCFSC
Trigger: ACAGGAGAAGCAACAGTTTCAGCGCCATCTGACCCG...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGAGGTTCGGCATTCCCTaGTGCTGCCAGGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMRFGIP*CCQEEF
Trigger: GAATTCCTCCTGGCAGCATCAGGGAATGCCGAACCT...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGGCCTCCTTCTCCCCTaGAAGCTGACAAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMGLLLP*KLTKSR
Trigger: TCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGAGTCATCTCCTCCCCTaGCTCCCGAAAACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMSHLLP*LPKTRF
Trigger: GAACCTGGTTTTCGGGAGTCAGGGGAGGAGATGACT...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAAGCTTGGGCTCTACCTaGCCAGCTCCCCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGESLGST*PAPQAM
Trigger: CATGGCCTGGGGAGCTGGGCAGGTAGAGCCCAAGCT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACCGATGGACCTCAACTaGTGGCCTGAGGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGPMDLN*WPEGRS
Trigger: GCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCACTGTGCTTACCACTTTaGTTTCGTTACGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGALCLPL*FRYGEV
Trigger: CACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGCCTCGCAGGTGCTGTaGTGGCGCCGGCACAGCTCG +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFASQVL*WRRHSS
Trigger: CGAGCTGTGCCGGCGCCACCACAGCACCTGCGAGGC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCTCTTTGTGCGTTCTaGGCCTGGGCTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGALCAF*AWADAG
Trigger: GCCGGCATCAGCCCAGGCCCAGAACGCACAAAGAGC...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAAGGGCTGGCTTGCTCTaGCCAGACCCCGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATRAGLL*PDPGLP
Trigger: AGGCAGCCCGGGGTCTGGCCAGAGCAAGCCAGCCCT...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGAAGGGTTCTGCTCCTaGCCAGGTGGAACCAGTGAT +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMEGFCS*PGGTSD
Trigger: ATCACTGGTTCCACCTGGCCAGGAGCAGAACCCTTC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAGCAAAAGGCAGCTCCTaGCCCGCGGTCCGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATAKGSS*PAVRTG
Trigger: CCCTGTGCGGACCGCGGGCCAGGAGCTGCCTTTTGC...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCACAGGCCATGGGCTTTTaGTCCAAAGTAGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAQAMGF*SKVVAL
Trigger: AAGAGCAACTACTTTGGACCAAAAGCCCATGGCCTG...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGATGGACCTCAACTGCTaGCCTGAGGGGCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGMDLNC*PEGRSH
Trigger: GTGGCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCAT...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACTGGGGCCAGCCCGATaGACCTCAACTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGLGPAR*TSTAGL
Trigger: CAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAACTGATGCCAGCAGATaGGCTGGGGCCAGCCCGATG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGETDASR*AGASPM
Trigger: CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGTTGTCCGCCCGGGGCTaGCCAGAGGTGTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGLSARG*PEVWNK
Trigger: CTTATTCCACACCTCTGGTCAGCCCCGGGCGGACAA...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGTTCTGGGCCTGGGCTaGTGCCGGCATCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSVLGLG*CRHQVW
Trigger: CCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAAC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGCCAGGTGGAACCAGTaGTCGGAAAGGCATATTTCC +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMARWNQ*SERHIS
Trigger: GGAAATATGCCTTTCCGATCACTGGTTCCACCTGGC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCCAGCCGGCGCTTGCTaGCTACCTCAAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFPAGAC*LPQASA
Trigger: GGCCGAGGCTTGAGGTAGGCAGCAAGCGCCGGCTGG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAATGCTTCCCACTGGACTaGAGGGCGTCGGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGECFPLD*RASAPE
Trigger: TTCTGGAGCCGACGCCCTGCAGTCCAGTGGGAAGCA...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGCAGAAAGGTCTGCCCTaGAGACCCGGCCCTCACTTG +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGQKGLP*RPGPHL
Trigger: CAAGTGAGGGCCGGGTCTGCAGGGCAGACCTTTCTG...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAGGTGCCGGGGTGGCCTaGTGTGGGTTCTGGAGCATC +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATGAGVA*CGFWSI
Trigger: GATGCTCCAGAACCCACAGCAGGCCACCCCGGCACC...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAGAGGGCCCCGTCTGCTaGCATGTGGACATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATEGPVC*HVDIWP
Trigger: GGGCCAGATGTCCACATGGCAGCAGACGGGGCCCTC...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCATGCTGTTGCTGTAAATaGTTTTGCTGCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGACCCCK*FCCCSL
Trigger: AAGGGAGCAGCAGCAAAAGCATTTACAGCAACAGCA...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACCGATGGACCTCAACTaGTGGCCTGAGGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATPMDLN*WPEGRS
Trigger: GCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGACATCTGTGCACAACTaGACAGTGACCACGCTCCCA +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMTSVHN*TVTTLP
Trigger: TGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGT...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGAGAGTGCTTCCCACTaGACTGCAGGGCGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSESASH*TAGRRL
Trigger: GAGCCGACGCCCTGCAGTCCAGTGGGAAGCACTCTC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGGGAGCCCCCTAGGCTaGGGGAATCTGTACTCACAG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEGSPLG*GNLYSQ
Trigger: CTGTGAGTACAGATTCCCCCAGCCTAGGGGGCTCCC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCATCAGGTTTGGACTaGGATTGTCCGCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGASGLD*DCPPGA
Trigger: AGCCCCGGGCGGACAATCCCAGTCCAAACCTGATGC...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGGCGATCTGCTGGAGCTaGTGGGCAGAGGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGAICWS*WAEDSS
Trigger: AGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGC...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGTTGGCAGCGATCTGCTaGAGCTGGTGGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGLAAIC*SWWAED
Trigger: GTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAA...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGGCCTGCTGTGGGTTCTaGAGCATCTGCTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGACCGF*SICSRF
Trigger: GAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGC...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGCCTGCTGTGGGTTCTaGAGCATCTGCTCGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEACCGF*SICSRF
Trigger: GAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCGGGGTGGCCTGCTGTaGGTTCTGGAGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSRGGLL*VLEHLL
Trigger: GAGCAGATGCTCCAGAACCCACAGCAGGCCACCCCG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGCAGGTTCACATGGCTaGGCTGGAGGTAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSAGSHG*AGGRGL
Trigger: GAGGCCCCTACCTCCAGCCCAGCCATGTGAACCTGC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGATTGGTACTGGGGTGGTaGGCGGGTCAGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGLVLGW*AGQMAL
Trigger: CAGCGCCATCTGACCCGCCCACCACCCCAGTACCAA...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAGTCGGGTCTTGGTACTaGGGTGGTGGGCGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGVGSWY*GGGRVR
Trigger: TCTGACCCGCCCACCACCCCAGTACCAAGACCCGAC...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCCTTGTGTCGGGTCTTaGTACTGGGGTGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSPCVGS*YWGGGR
Trigger: CCGCCCACCACCCCAGTACCAAGACCCGACACAAGG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGTCCATTGGTGGCCTGTaGCGGGGGCTGGGCAACTAT +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGSIGGL*RGLGNY
Trigger: ATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGA...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAAGCTCATGGGAGCCATaGGCCTGTTGGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGESSWEP*ACWALP
Trigger: AGGCAGTGCCCAACAGGCCCATGGCTCCCATGAGCT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAGCCTCACCTGGAGCTTaGGCTCTACCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGASPGA*ALPAQL
Trigger: GAGCTGGGCAGGTAGAGCCCAAGCTCCAGGTGAGGC...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGTCTTCCCCTTCAGATTaGGGAACTCCCTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMSSPSD*GTPSEG
Trigger: ACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGA...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
3UTR CAA 72 bp ACATGGGAGTGGCAGAAGTTGTCAAACCAAGTGGAATaGCTTCCTCCGGGCCGGCCTACGGCCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TWEWQKLSNQVE*LPPGRPTASFP
Trigger: GGGGAAGGAGGCCGTAGGCCGGCCCGGAGGAAGCAATTCCACTTGGTTTGACAACTTCTGCCACTCCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATGGCGAAGGCGCTCCATaGCCGCGCTGTGCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYGEGAP*PRCAAA
Trigger: TGCCGCGGCACAGCGCGGTCATGGAGCGCCTTCGCC...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCTGTTGCTGGCTGCTaGGATAGGGGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGPVAGC*DRGSCC
Trigger: ACAACAGCTCCCCCTATCTCAGCAGCCAGCAACAGG...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCAGCAGAGGACCCTGTaGACTGTCCAACCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGQQRTL*TVQPAV
Trigger: CACAGCAGGTTGGACAGTTCACAGGGTCCTCTGCTG...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGATGCACAACTGCACAGTaGCCACGCTCCCACCATGGG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGCTTAQ*PRSHHG
Trigger: CCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCA...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCGGCGAGTCTTCTTATaGCCAGGAAAGAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGRRVFL*PGKRSP
Trigger: CGGGGACCTCTTTCCTGGGCATAAGAAGACTCGCCG...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGATGCTTGGCAGCGATCTaGTGGAGCTGGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGCLAAI*WSWWAE
Trigger: CTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCA...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACCTGCTGTGGGAAGCTaGCTTGTGTCGGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEPAVGS*LVSGLG
Trigger: ACCAAGACCCGACACAAGGCAGCTTCCCACAGCAGG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGATTTTCAGGTGGGCCTaGTGCTGCATGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMIFRWA*CCMWKL
Trigger: CAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAAT...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGTGGAAGACGGGGCTGTaGACAGAAGCAAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMWKTGL*TEAKSS
Trigger: AGATGACTTTGCTTCTGTGCACAGCCCCGTCTTCCA...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCCTCTCGGGGCCGGCTaGCACTGCGGGCTTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFPLGAG*HCGLRS
Trigger: GGAGCGAAGCCCGCAGTGCCAGCCGGCCCCGAGAGG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATAGGTGGGCAGCACCATaGGCCGCGGGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYRWAAP*AAGCTG
Trigger: GCCCGTGCAGCCCGCGGCCCATGGTGCTGCCCACCT...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCGCGCGAACTCCGCCATaGGGCAGGTGGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRARTPP*GRWAAP
Trigger: TGGTGCTGCCCACCTGCCCCATGGCGGAGTTCGCGC...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTAGGGCGAAGGTGTGTTaGCGCTCCAGCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFRAKVC*RSSSRR
Trigger: GCGCCTGGAGCTGGAGCGCCAACACACCTTCGCCCT...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGCTTCCCGGCGCGCTTaGCCTTGGCCTGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLASRRA*PWPGCS
Trigger: GCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAGAGAGTGCTTCCCACTaGACTGCAGGGCGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATESASH*TAGRRL
Trigger: GAGCCGACGCCCTGCAGTCCAGTGGGAAGCACTCTC...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGATGCCGGCATCAGGTTTaGACTGGGATTGTCCGCCCG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGCRHQV*TGIVRP
Trigger: CGGGCGGACAATCCCAGTCCAAACCTGATGCCGGCA...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAATCTGCTGGAGCTGGTaGGCAGAGGACAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEICWSW*AEDSSE
Trigger: CTCAGAGCTGTCCTCTGCCCACCAGCTCCAGCAGAT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGCGATCTGCTGGAGCTaGTGGGCAGAGGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSAICWS*WAEDSS
Trigger: AGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGACACGGCAGGCGGCTaGGTCCCAACACTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFDTAGG*VPTLVA
Trigger: GGCTACCAGTGTTGGGACCCAGCCGCCTGCCGTGTC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTAGCTGTTGTGGGAGCTaGCCACGGACACGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFSCCGS*PRTRQA
Trigger: CGCCTGCCGTGTCCGTGGCCAGCTCCCACAACAGCT...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACTGTCCAACCTGCTGTaGGAAGCTGCCTTGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGELSNLL*EAALCR
Trigger: CCGACACAAGGCAGCTTCCCACAGCAGGTTGGACAG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGACACCCCGGTCCTGTTaGCCTGAGTTTGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGTPRSC*PEFVGR
Trigger: TCTCCCCACAAACTCAGGCCAACAGGACCGGGGTGT...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGATCCATTGGTGGCCTGTaGCGGGGGCTGGGCAACTAT +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGSIGGL*RGLGNY
Trigger: ATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGA...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCGGGCATGTCCATTGGTaGCCTGTGGCGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRGHVHW*PVAGAG
Trigger: CCCAGCCCCCGCCACAGGCCACCAATGGACATGCCC...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACATGTGGGCATGTCCATTaGTGGCCTGTGGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATCGHVH*WPVAGA
Trigger: AGCCCCCGCCACAGGCCACCAATGGACATGCCCACA...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGTGTTCTGGCCCACGTTaGTCTGCCGTGGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGCSGPR*SAVECG
Trigger: CCCACATTCCACGGCAGACCAACGTGGGCCAGAACA...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGAGACGGAGGTGTTCTaGCCCACGTTGGTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSETEVF*PTLVCR
Trigger: ACGGCAGACCAACGTGGGCCAGAACACCTCCGTCTC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAGAGACGGAGGTGTTCTaGCCCACGTTGGTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGETEVF*PTLVCR
Trigger: ACGGCAGACCAACGTGGGCCAGAACACCTCCGTCTC...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACTGTTCCCTGGGGTCTaGCCACTGAGGTTCGGCATT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGELFPGV*PLRFGI
Trigger: AATGCCGAACCTCAGTGGCCAGACCCCAGGGAACAG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACACGTTGCTGTTCCCTaGGGTCTGGCCACTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEHVAVP*GLATEV
Trigger: AACCTCAGTGGCCAGACCCCAGGGAACAGCAACGTG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGGCCGACATACCACTTaGGGTGGCAAATGGCTATTA +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMGRHTT*GGKWLL
Trigger: TAATAGCCATTTGCCACCCCAAGTGGTATGTCGGCC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGGGGCAGCAGCCAGATaGGGTCAGGAGAGGAACAAG +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSGAAAR*GQERNK
Trigger: CTTGTTCCTCTCCTGACCCCATCTGGCTGCTGCCCC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACTCTTAACTGTATCATaGAGATGCGTGGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGELLTVS*RCVAGR
Trigger: CCGCCCGGCCACGCATCTTCATGATACAGTTAAGAG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGATCAGATTCCCAGCCTaGGGGAACACTCGAGGACAG +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGIRFPA*GNTRGQ
Trigger: CTGTCCTCGAGTGTTCCCTCAGGCTGGGAATCTGAT...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACCGGTCCTGTTGGCCTaGGTTTGTGGGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATPVLLA*VCGERG
Trigger: TCCTCTCTCCCCACAAACTCAGGCCAACAGGACCGG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCTGCCCATAGGCAGCTaGGACGGAGGTGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFLPIGS*DGGVLA
Trigger: GGCCAGAACACCTCCGTCTCAGCTGCCTATGGGCAG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAAGGTTCGGCATTCCCTaGTGCTGCCAGGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGERFGIP*CCQEEF
Trigger: GAATTCCTCCTGGCAGCATCAGGGAATGCCGAACCT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCACCAATGCCACTTAATTaGTTTAAACCATCACCTACC +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAPMPLN*FKPSPT
Trigger: GGTAGGTGATGGTTTAAATCAATTAAGTGGCATTGG...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAAGTCATCTCCTCCCCTaGCTCCCGAAAACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGESHLLP*LPKTRF
Trigger: GAACCTGGTTTTCGGGAGTCAGGGGAGGAGATGACT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTGGCCTTGGCCTGGATaGAGCGCTGGTGCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLWPWPG*SAGAGR
Trigger: TCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCA...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCATGTAAATGCTTTTGCTaGTGCTCCCTTTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ADGLGPARWTSTAGLRGACKCFC*CSLCFC
Trigger: ACAGAAACAAAGGGAGCAGCAGCAAAAGCATTTACA...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGTCCCCTTATTGTGCTaGTGGGAGAGGCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEVPLLC*WERPEL
Trigger: AAGCTCTGGCCTCTCCCAGCAGCACAATAAGGGGAC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCTGTGTCACCAGACCTaGTATCCCATGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGLCHQT*YPMPPV
Trigger: GACAGGAGGCATGGGATAGCAGGTCTGGTGACACAG...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCAGGGCGAAGGTGTGTTaGCGCTCCAGCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRRAKVC*RSSSRR
Trigger: GCGCCTGGAGCTGGAGCGCCAACACACCTTCGCCCT...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGCCTGGATGCAGCGCTaGTGCAGGGCGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFAWMQR*CRAKVC
Trigger: ACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACATGCCGGCATCAGGTTTaGACTGGGATTGTCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATCRHQV*TGIVRP
Trigger: CGGGCGGACAATCCCAGTCCAAACCTGATGCCGGCA...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTTGTGCGTTCTGGGCCTaGGCTGATGCCGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFCAFWA*ADAGIR
Trigger: CCTGATGCCGGCATCAGCCCAGGCCCAGAACGCACA...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACATTGGCAGCGATCTGCTaGAGCTGGTGGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATLAAIC*SWWAED
Trigger: GTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAA...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTATAAGCCATCAGGGCTaGCTTGCTCTGGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSISHQG*LALARP
Trigger: GGGTCTGGCCAGAGCAAGCCAGCCCTGATGGCTTAT...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGATGTTCTGGCCCACGTTaGTCTGCCGTGGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGCSGPR*SAVECG
Trigger: CCCACATTCCACGGCAGACCAACGTGGGCCAGAACA...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGAATTCTGGCCTCCCATaGCTGGTGACACCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGNSGLP*LVTPLG
Trigger: TCCCAAGGGTGTCACCAGCCATGGGAGGCCAGAATT...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCTGGGGCAGGGGCGCTaGTCCTCTGCTGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRLGQGR*SSAVHS
Trigger: TGAGTGCACAGCAGAGGACCAGCGCCCCTGCCCCAG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCTGGGGCCAGCCCGATaGACCTCAACTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRLGPAR*TSTAGL
Trigger: CAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACTTCCATATGTAGCCTaGGGTCCTGCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGELPYVA*GPAART
Trigger: TGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGTTCTGGGCCTGGGCTaGTGCCGGCATCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLVLGLG*CRHQVW
Trigger: CCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAAC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGATTACTCGGTGGCTGGTaGCTCAGCAGGTTCACATGG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGLLGGW*LSRFTW
Trigger: CCATGTGAACCTGCTGAGTCACCAGCCACCGAGTAA...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGAGGGAGTTCTGCTCGTaGCTTATATGGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGREFCS*LIWDSC
Trigger: GCAGCTGTCCCATATAAGTCACGAGCAGAACTCCCT...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGAGGTGCTGTTGCCTCTaGAGGAACTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGRCCCL*RNCCCC
Trigger: ACAGCAACAGCAGTTCCTTCAGAGGCAACAGCACCT...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACAGCAGAGGACCCTGTaGACTGTCCAACCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATQQRTL*TVQPAV
Trigger: CACAGCAGGTTGGACAGTTCACAGGGTCCTCTGCTG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAAACTGGAGGCTGCAGTaGAGGGACTCACGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGNWRLQ*RDSRCC
Trigger: ACAGCAACGTGAGTCCCTTCACTGCAGCCTCCAGTT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCCCAACACCAGGTACTaGTGCCAGCAGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFPNTRY*CQQMGW
Trigger: CCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAGGCCTCCTTCTCCCCTaGAAGCTGACAAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGGLLLP*KLTKSR
Trigger: TCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCC...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCCCCCAGCCGGCGCTTaGTGCCTACCTCAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYPPAGA*CLPQAS
Trigger: CGAGGCTTGAGGTAGGCAGCAAGCGCCGGCTGGGGG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGTGGAAACTGGAGGCTaGAGTGAAGGGACTCACGTT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEVETGG*SEGTHV
Trigger: AACGTGAGTCCCTTCACTGCAGCCTCCAGTTTCCAC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCGGCGCGCTTGGCCTTaGCCTGGATGCAGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYRRAWP*PGCSAG
Trigger: ACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACTGGAGGCAGTCCATTaGAAGAGATGGCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGELEAVH*KRWQLP
Trigger: TGGGAGTTGCCATCTCTTCCAATGGACTGCCTCCAG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGCATCAGGTTTGGACTaGGATTGTCCGCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFASGLD*DCPPGA
Trigger: AGCCCCGGGCGGACAATCCCAGTCCAAACCTGATGC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGCTCGCGCTTCTGCTTaGCAGCGATCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFARASA*QRSAGA
Trigger: AGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAACATCTGGCCCGGGGCTaGTGCCGGGGTGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKHLARG*CRGGLL
Trigger: CAGCAGGCCACCCCGGCACCAGCCCCGGGCCAGATG...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACATGTAGCTGGAAGGGCTaGCAGGCTTCTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATCSWKG*QASPWG
Trigger: ACCCCATGGAGAAGCCTGCCAGCCCTTCCAGCTACA...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGTCGGGTCTTGGTACTaGGGTGGTGGGCGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLVGSWY*GGGRVR
Trigger: TCTGACCCGCCCACCACCCCAGTACCAAGACCCGAC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCCCTTGTGTCGGGTCTTaGTACTGGGGTGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLPCVGS*YWGGGR
Trigger: CCGCCCACCACCCCAGTACCAAGACCCGACACAAGG...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACACGTTGGTCTGCCGTaGAATGTGGGCATGTCCATT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEHVGLP*NVGMSI
Trigger: AATGGACATGCCCACATTCCACGGCAGACCAACGTG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAAATTCTGGCCTCCCATaGCTGGTGACACCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGNSGLP*LVTPLG
Trigger: TCCCAAGGGTGTCACCAGCCATGGGAGGCCAGAATT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCTTCCATATGTAGCCTaGGGTCCTGCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSLPYVA*GPAART
Trigger: TGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACTCTTAACTGTATCATaGAGATGCGTGGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATLLTVS*RCVAGR
Trigger: CCGCCCGGCCACGCATCTTCATGATACAGTTAAGAG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTTGTCCGCCCGGGGCTaGCCAGAGGTGTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLLSARG*PEVWNK
Trigger: CTTATTCCACACCTCTGGTCAGCCCCGGGCGGACAA...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTTGGGAGCCAGGGAACTaGGCCACACCCCGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFWEPGN*ATPRSC
Trigger: ACAGGACCGGGGTGTGGCTCAGTTCCCTGGCTCCCA...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATTGGGAGCCAGGGAACTaGGCCACACCCCGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYWEPGN*ATPRSC
Trigger: ACAGGACCGGGGTGTGGCTCAGTTCCCTGGCTCCCA...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCCCCAACACCAGGTACTaGTGCCAGCAGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLPNTRY*CQQMGW
Trigger: CCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGG...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTGCACAACTGCACAGTaGCCACGCTCCCACCATGGG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLCTTAQ*PRSHHG
Trigger: CCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCA...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGCCGGCACAGCTCGATaGGCCGGCGAAGGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKAGTAR*AGEGAP
Trigger: TGGAGCGCCTTCGCCGGCGCATCGAGCTGTGCCGGC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCTGCTTCCCACTGGACTaGAGGGCGTCGGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRCFPLD*RASAPE
Trigger: TTCTGGAGCCGACGCCCTGCAGTCCAGTGGGAAGCA...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGGCATGAGGTTGCTTTaGGATATGGAGCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSGMRLL*DMEPTV
Trigger: GACTGTCGGCTCCATATCGCAAAGCAACCTCATGCC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGAGCTCCTTCCACTCCTaGTCGTTAAGGTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGSSFHS*SLRLRS
Trigger: AGACCTCAACCTTAACGAGCAGGAGTGGAAGGAGCT...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCAGAAAGGTCTGCCCTaGAGACCCGGCCCTCACTTG +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRQKGLP*RPGPHL
Trigger: CAAGTGAGGGCCGGGTCTGCAGGGCAGACCTTTCTG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAGGGCAATACCACACCTaGAAGGGCTCTTTGTGCGTT +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGGQYHT*KGSLCV
Trigger: AACGCACAAAGAGCCCTTGCAGGTGTGGTATTGCCC...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTATCTGCTCGCGCTTCTaGTTGGCAGCGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFICSRF*LAAICW
Trigger: CCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGAT...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCCTGGTAGCCTGGGCTTaGACAGGGACACTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLLVAWA*TGTLEG
Trigger: CCCTTCCAGTGTCCCTGTGCAAGCCCAGGCTACCAG...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTAGGTGGGCCTGCTGCTaGATGTGGAAACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFRWACC*MWKLEA
Trigger: AGCCTCCAGTTTCCACATGCAGCAGCAGGCCCACCT...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAACATCTGTGCACAACTaGACAGTGACCACGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGTSVHN*TVTTLP
Trigger: TGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACAAACCAAGTGGAATTaGTTCCTCCGGGCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATQTKWN*FLRAGL
Trigger: TAGGCCGGCCCGGAGGAAGCAATTCCACTTGGTTTG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTTCGCAGGTGCTGTGGTaGCGCCGGCACAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFSQVLW*RRHSSM
Trigger: CATCGAGCTGTGCCGGCGCCACCACAGCACCTGCGA...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACTGGAGGCAGTCCATTaGAAGAGATGGCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGLEAVH*KRWQLP
Trigger: TGGGAGTTGCCATCTCTTCCAATGGACTGCCTCCAG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCCGTCTGCTGCCATGTaGACATCTGGCCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYPSAAM*TSGPGL
Trigger: CAGCCCCGGGCCAGATGTCCACATGGCAGCAGACGG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTAGTCTTGCTTGTAGCTaGAAGGGCTGGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSSLACS*KGWQAS
Trigger: AGAAGCCTGCCAGCCCTTCCAGCTACAAGCAAGACT...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGAGGACAGCTGGAGTTaGATGGACCCAAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSEDSWS*MDPRCS
Trigger: TGAACACCTTGGGTCCATCCAACTCCAGCTGTCCTC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGGCTGGGCAACTATCTaGGTTATGCCAGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSGWATI*VMPEAM
Trigger: CATGGCTTCTGGCATAACCCAGATAGTTGCCCAGCC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACACGTTGGTCTGCCGTaGAATGTGGGCATGTCCATT +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGHVGLP*NVGMSI
Trigger: AATGGACATGCCCACATTCCACGGCAGACCAACGTG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCCCTTATTGTGCTGCTaGGAGAGGCCAGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFPLLCC*ERPELP
Trigger: GGGAAGCTCTGGCCTCTCCCAGCAGCACAATAAGGG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCAGCTCATGGGAGCCATaGGCCTGTTGGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRSSWEP*ACWALP
Trigger: AGGCAGTGCCCAACAGGCCCATGGCTCCCATGAGCT...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACCTCCTGTCCCTTTTTaGCATACGCAGTCAACAGCC +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGPPVPF*HTQSTA
Trigger: GGCTGTTGACTGCGTATGCCAAAAAGGGACAGGAGG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCCTGCTGCCAGGACATaGGAGGAAGGGATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRPAART*EEGIPG
Trigger: CCCAGGAATCCCTTCCTCCCATGTCCTGGCAGCAGG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCGGGGCAGCAGCCAGATaGGGTCAGGAGAGGAACAAG +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRGAAAR*GQERNK
Trigger: CTTGTTCCTCTCCTGACCCCATCTGGCTGCTGCCCC...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAATTATTCGCGGAGTTCTaGTTCAAGTTACTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGELFAEF*FKLLGG
Trigger: GCCACCGAGTAACTTGAATCAGAACTCCGCGAATAA...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCCCTGTTGCTGGCTGCTaGGATAGGGGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLPVAGC*DRGSCC
Trigger: ACAACAGCTCCCCCTATCTCAGCAGCCAGCAACAGG...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAATGGTCCAAAAGCAACTaGTGCTGCTTCATTACAGCG +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEWSKSN*CCFITA
Trigger: CGCTGTAATGAAGCAGCATCAGTTGCTTTTGGACCA...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAACTCATCCACTCCTCTaGAGTCCTGTTCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGTHPLL*SPVLQQ
Trigger: CTGCTGAAGAACAGGACTTCAGAGGAGTGGATGAGT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAAAATCCTTCCATTACTaGGACCCTAACAGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEKSFHY*DPNRSS
Trigger: GGACGACCTGTTAGGGTCTCAGTAATGGAAGGATTT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGGGTTCTGGAGCATCTaGTCGCGCTTCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLGFWSI*SRFCLA
Trigger: TGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGAAAGGGGTTTTGTATTaGCGTAGTCCAGCACAGACC +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGKGVLY*RSPAQT
Trigger: GGTCTGTGCTGGACTACGGCAATACAAAACCCCTTT...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGGCCAGACCCCGGGCTaGCTTGCCCACAGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKGQTPG*LAHSPL
Trigger: AAGCGGACTGTGGGCAAGGCAGCCCGGGGTCTGGCC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTTTCAGGTGGGCCTGCTaGTGCATGTGGAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFFRWAC*CMWKLE
Trigger: CTCCAGTTTCCACATGCAGCAGCAGGCCCACCTGAA...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTATTTTCAGGTGGGCCTaGTGCTGCATGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSIFRWA*CCMWKL
Trigger: CAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAAT...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAACTGCCTGGGAGAATTaGGGGCTAGACATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGTAWEN*GLDIFR
Trigger: CCTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTGGGCCTGTTGGGCACTaGCTGGGAGAATTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFGPVGH*LGELRA
Trigger: AGCCCGCAATTCTCCCAGGCAGTGCCCAACAGGCCC...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTGCCTGGATGCAGCGCTaGTGCAGGGCGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFAWMQR*CRAKVC
Trigger: ACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGC...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATTATCATGAAGATGCGTaGCCGGGCGGCCGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYYHEDA*PGGRAR
Trigger: CCGAGCACGGCCGCCCGGCCACGCATCTTCATGATA...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACATTCTGAGGGGAAGTaGCGCTGTCAAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGHSEGK*RCQDSS
Trigger: AGAGGAATCTTGACAGCGCCACTTCCCCTCAGAATG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCGGGGTGGCCTGCTGTaGGTTCTGGAGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFRGGLL*VLEHLL
Trigger: GAGCAGATGCTCCAGAACCCACAGCAGGCCACCCCG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGGGCTGGTGCCGGGGTaGCCTGCTGTGGGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKGLVPG*PAVGSG
Trigger: TCCAGAACCCACAGCAGGCCACCCCGGCACCAGCCC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGATTCAAGTTACTCGGTaGCTGGTGACTCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGIQVTR*LVTQQV
Trigger: AACCTGCTGAGTCACCAGCCACCGAGTAACTTGAAT...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCCCTTATTGTGCTGCTaGGAGAGGCCAGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRPLLCC*ERPELP
Trigger: GGGAAGCTCTGGCCTCTCCCAGCAGCACAATAAGGG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCTGTTCCCTGGGGTCTaGCCACTGAGGTTCGGCATT +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRLFPGV*PLRFGI
Trigger: AATGCCGAACCTCAGTGGCCAGACCCCAGGGAACAG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCTGTTGGGCACTGCCTaGGAGAATTGCGGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRLLGTA*ENCGLD
Trigger: GTCTAGCCCGCAATTCTCCCAGGCAGTGCCCAACAG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTATGGACCTCAACTGCTaGCCTGAGGGGCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFMDLNC*PEGRSH
Trigger: GTGGCTGCGCCCCTCAGGCCAGCAGTTGAGGTCCAT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAATAAGCCCGACAGTGTaGGGTTTCACTGGTGTTACT +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEISPTV*GFTGVT
Trigger: AGTAACACCAGTGAAACCCCACACTGTCGGGCTTAT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTACCACGCTCCCACCATaGGCAACATACATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSTTLPP*ATYMFR
Trigger: TCTGAACATGTATGTTGCCCATGGTGGGAGCGTGGT...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTTACTCGGTGGCTGGTaGCTCAGCAGGTTCACATGG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLLLGGW*LSRFTW
Trigger: CCATGTGAACCTGCTGAGTCACCAGCCACCGAGTAA...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCGGGTCAGATGGCGCTaGAACTGTTGCTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRRVRWR*NCCFSC
Trigger: ACAGGAGAAGCAACAGTTTCAGCGCCATCTGACCCG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCAACTGGAGGCTGCAGTaGAGGGACTCACGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRNWRLQ*RDSRCC
Trigger: ACAGCAACGTGAGTCCCTTCACTGCAGCCTCCAGTT...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAACCGACCGCCCATCTGTaGGGCAGGGCTCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKPTAHL*GRALAE
Trigger: TTCAGCCAGAGCCCTGCCTCACAGATGGGCGGTCGG...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGTCTTCGACAGGCTCCTaGTTCAGTTCTTTATTCAGG +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGSSTGS*FSSLFR
Trigger: CCTGAATAAAGAACTGAAGCAGGAGCCTGTCGAAGA...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGTTCTTGCTCAAAGGCTaGTGGAGAGAATTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGFLLKG*WREFRL
Trigger: AAGACGGAATTCTCTCCAGCAGCCTTTGAGCAAGAA...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGGGCAATACCACACCTaGAAGGGCTCTTTGTGCGTT +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFGQYHT*KGSLCV
Trigger: AACGCACAAAGAGCCCTTGCAGGTGTGGTATTGCCC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGAGGGCCCCGTCTGCTaGCATGTGGACATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKEGPVC*HVDIWP
Trigger: GGGCCAGATGTCCACATGGCAGCAGACGGGGCCCTC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGTGAACTGTCCAACCTaGTGTGGGAAGCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFVNCPT*CGKLPC
Trigger: ACAAGGCAGCTTCCCACAGCAGGTTGGACAGTTCAC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGTTGGTCCAAAGTAGTTaGTCTTTCTTTGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: AVPTPGTDASRWAGASPMLVQSS*SFFESE
Trigger: CTCAGATTCAAAGAAAGAGCAACTACTTTGGACCAA...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTTTTAGAACCCTATCCTaGTGTCCCAACACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSFRTLS*CPNTRY
Trigger: GTACCTGGTGTTGGGACAGCAGGATAGGGTTCTAAA...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCATTCAAGTGAAGGCTaGAGTCAGCCAGACGCTTTT +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSHSSEG*SQPDAF
Trigger: AAAAGCGTCTGGCTGACTCCAGCCTTCACTTGAATG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCCCAAGGGGGTTTGTGTaGCAGAGCCAGAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLPRGFV*QSQKTL
Trigger: CAGAGTCTTCTGGCTCTGCCACACAAACCCCCTTGG...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGAGGACAGCTGGAGTTaGATGGACCCAAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFEDSWS*MDPRCS
Trigger: TGAACACCTTGGGTCCATCCAACTCCAGCTGTCCTC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCATGTCCAGGGCCCATTaGCATCAGATTCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLMSRAH*HQIPSL
Trigger: CAGGCTGGGAATCTGATGCCAATGGGCCCTGGACAT...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATGCCTGTGGCGGGGGCTaGGCAACTATCTGGGTTATG +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYACGGG*ATIWVM
Trigger: CATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGC...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTGCCTGTGGCGGGGGCTaGGCAACTATCTGGGTTATG +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFACGGG*ATIWVM
Trigger: CATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGC...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCTAGACATTTTCAGGTaGGCCTGCTGCTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFLDIFR*ACCCMW
Trigger: CCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTGAGCCCACTGCCACCTaGCTGCCCGCTATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFEPTAT*LPAIGK
Trigger: TTTGCCTATAGCGGGCAGCCAGGTGGCAGTGGGCTC...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCAGGCCATGGGCTTTTaGTCCAAAGTAGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSQAMGF*SKVVAL
Trigger: AAGAGCAACTACTTTGGACCAAAAGCCCATGGCCTG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCCTGCTGCCAGGACATaGGAGGAAGGGATTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFPAART*EEGIPG
Trigger: CCCAGGAATCCCTTCCTCCCATGTCCTGGCAGCAGG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACACCGCGACTCAGGCTaGTTGCATGAGTATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATHRDSG*LHEYFP
Trigger: AGGAAAATACTCATGCAACCAGCCTGAGTCGCGGTG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACACATAGGACACTCCTaGATGATCCATTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATHIGHS*MIHWET
Trigger: AGTCTCCCAATGGATCATTCAGGAGTGTCCTATGTG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATTCCAAGTACCCCCAGTaGGAAAGGCACTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYSKYPQ*ERHCWC
Trigger: GCACCAGCAGTGCCTTTCTCACTGGGGGTACTTGGA...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCGGCGAGTCTTCTTATaGCCAGGAAAGAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFRRVFL*PGKRSP
Trigger: CGGGGACCTCTTTCCTGGGCATAAGAAGACTCGCCG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCGGCATGAGGTTGCTTTaGGATATGGAGCCGACAGTC +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRGMRLL*DMEPTV
Trigger: GACTGTCGGCTCCATATCGCAAAGCAACCTCATGCC...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAAATATTAATGTCCTGTaGCAAGGGGGTTTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGNINVL*QGGLCG
Trigger: GCCACACAAACCCCCTTGGCACAGGACATTAATATT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTATCTGCTCGCGCTTCTaGTTGGCAGCGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFICSRF*LAAICW
Trigger: CCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGAT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCCTGCTGTGGGAAGCTaGCTTGTGTCGGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYPAVGS*LVSGLG
Trigger: ACCAAGACCCGACACAAGGCAGCTTCCCACAGCAGG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGACCCAAGGTGTTCATaGCGGGCACGGCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKDPRCS*RARQQR
Trigger: CCTCTGCTGCCGTGCCCGGCATGAACACCTTGGGTC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGTGGAAACTGGAGGCTaGAGTGAAGGGACTCACGTT +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLVETGG*SEGTHV
Trigger: AACGTGAGTCCCTTCACTGCAGCCTCCAGTTTCCAC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGGGCCTGTTGGGCACTaGCTGGGAGAATTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKGPVGH*LGELRA
Trigger: AGCCCGCAATTCTCCCAGGCAGTGCCCAACAGGCCC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATATCATGAAGATGCGTaGCCGGGCGGCCGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKYHEDA*PGGRAR
Trigger: CCGAGCACGGCCGCCCGGCCACGCATCTTCATGATA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGTTGCTCAAAGGCTGCTaGAGAGAATTCCGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: NPILLSQHQVLMPADGLGLLKGC*REFRLN
Trigger: ATTAAGACGGAATTCTCTCCAGCAGCCTTTGAGCAA...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATTGGTACTGGGGTGGTaGGCGGGTCAGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKLVLGW*AGQMAL
Trigger: CAGCGCCATCTGACCCGCCCACCACCCCAGTACCAA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGTCTTGGTACTGGGGTaGTGGGCGGGTCAGATGGCG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKVLVLG*WAGQMA
Trigger: CGCCATCTGACCCGCCCACCACCCCAGTACCAAGAC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCTGTCCAACCTGCTGTaGGAAGCTGCCTTGTGTCGG +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYLSNLL*EAALCR
Trigger: CCGACACAAGGCAGCTTCCCACAGCAGGTTGGACAG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCGGCTGGGCAACTATCTaGGTTATGCCAGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRGWATI*VMPEAM
Trigger: CATGGCTTCTGGCATAACCCAGATAGTTGCCCAGCC...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATTGCCAGGAGGAATTCTaGCCTCCCATGGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYCQEEF*PPMAGD
Trigger: GTCACCAGCCATGGGAGGCCAGAATTCCTCCTGGCA...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCTGTTGGGCACTGCCTaGGAGAATTGCGGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFLLGTA*ENCGLD
Trigger: GTCTAGCCCGCAATTCTCCCAGGCAGTGCCCAACAG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAACTGATGCCAGCAGATaGGCTGGGGCCAGCCCGATG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKTDASR*AGASPM
Trigger: CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGT...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAGCAAGTCATCTGACATaGGAGTGGCAGAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATASHLT*EWQKLS
Trigger: TGACAACTTCTGCCACTCCCATGTCAGATGACTTGC...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTCTTCCCCTTCAGATTaGGGAACTCCCTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLSSPSD*GTPSEG
Trigger: ACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGA...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGCCTCCCATGGCTGGTaGCACCCTTGGGACCGGTGG +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWASHGW*HPWDRW
Trigger: CCACCGGTCCCAAGGGTGTCACCAGCCATGGGAGGC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCACTCATCCACTCCTCTaGAGTCCTGTTCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRTHPLL*SPVLQQ
Trigger: CTGCTGAAGAACAGGACTTCAGAGGAGTGGATGAGT...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGCCAATGCCACTTAATTaGTTTAAACCATCACCTACC +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGPMPLN*FKPSPT
Trigger: GGTAGGTGATGGTTTAAATCAATTAAGTGGCATTGG...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGGCCCCAGAAAGGTCTaGCCTGCAGACCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWGPRKV*PADPAL
Trigger: GAGGGCCGGGTCTGCAGGGCAGACCTTTCTGGGGCC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATGCTTGGCAGCGATCTaGTGGAGCTGGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKCLAAI*WSWWAE
Trigger: CTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGGCCAGACCCCGGGCTaGCTTGCCCACAGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWGQTPG*LAHSPL
Trigger: AAGCGGACTGTGGGCAAGGCAGCCCGGGGTCTGGCC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCACTGCCTGGGAGAATTaGGGGCTAGACATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLTAWEN*GLDIFR
Trigger: CCTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGT...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAATGTTCAGAGAAAACTaGAGAAGGTGGGGAGACATA +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGMFREN*RRWGDI
Trigger: TATGTCTCCCCACCTTCTGCAGTTTTCTCTGAACAT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCAAACCAAGTGGAATTaGTTCCTCCGGGCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYQTKWN*FLRAGL
Trigger: TAGGCCGGCCCGGAGGAAGCAATTCCACTTGGTTTG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGCGCGAACTCCGCCATaGGGCAGGTGGGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWARTPP*GRWAAP
Trigger: TGGTGCTGCCCACCTGCCCCATGGCGGAGTTCGCGC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCATTCTGAGGGGAAGTaGCGCTGTCAAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRHSEGK*RCQDSS
Trigger: AGAGGAATCTTGACAGCGCCACTTCCCCTCAGAATG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCCAAGGGGGTTTGTGTaGCAGAGCCAGAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYPRGFV*QSQKTL
Trigger: CAGAGTCTTCTGGCTCTGCCACACAAACCCCCTTGG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGCTCGCGCTTCTGCTTaGCAGCGATCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKARASA*QRSAGA
Trigger: AGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTATTCAAGTTACTCGGTaGCTGGTGACTCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFIQVTR*LVTQQV
Trigger: AACCTGCTGAGTCACCAGCCACCGAGTAACTTGAAT...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATACACTCGAGGACAGCTaGAGTTGGATGGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYTLEDS*SWMDPR
Trigger: CCTTGGGTCCATCCAACTCCAGCTGTCCTCGAGTGT...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGGGCATGTCCATTGGTaGCCTGTGGCGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWGHVHW*PVAGAG
Trigger: CCCAGCCCCCGCCACAGGCCACCAATGGACATGCCC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACATCTGACATGGGAGTaGCAGAAGTTGTCAAACCAA +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATHLTWE*QKLSNQ
Trigger: TTGGTTTGACAACTTCTGCCACTCCCATGTCAGATG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAACTTGGGGTGGCAAATaGCTATTAGAAAAGAAGATC +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGETWGGK*LLEKKI
Trigger: GATCTTCTTTTCTAATAGCCATTTGCCACCCCAAGT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGACTTGGGGTGGCAAATaGCTATTAGAAAAGAAGATC +
Preference number: 4 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGTWGGK*LLEKKI
Trigger: GATCTTCTTTTCTAATAGCCATTTGCCACCCCAAGT...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAACATACCACTTGGGGTaGCAAATGGCTATTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGETYHLG*QMAIRK
Trigger: TTTTCTAATAGCCATTTGCCACCCCAAGTGGTATGT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTTATTCGCGGAGTTCTaGTTCAAGTTACTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLLFAEF*FKLLGG
Trigger: GCCACCGAGTAACTTGAATCAGAACTCCGCGAATAA...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTAGGTGCTGTTGCCTCTaGAGGAACTGCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFRCCCL*RNCCCC
Trigger: ACAGCAACAGCAGTTCCTTCAGAGGCAACAGCACCT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCAAATCCTTCCATTACTaGGACCCTAACAGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLKSFHY*DPNRSS
Trigger: GGACGACCTGTTAGGGTCTCAGTAATGGAAGGATTT...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCACATAGGACACTCCTaGATGATCCATTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRHIGHS*MIHWET
Trigger: AGTCTCCCAATGGATCATTCAGGAGTGTCCTATGTG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTTTTTCACTGGCTTTATaGTTCACCCCTTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSFSLAL*FTPSLR
Trigger: TCTCAAAGAAGGGGTGAATCATAAAGCCAGTGAAAA...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAAACTCCCTCAGAGGGTaGAATTTTCACTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATNSLRG*NFHWLY
Trigger: ATAAAGCCAGTGAAAATTTCACCCTCTGAGGGAGTT...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTAATATTAATGTCCTGTaGCAAGGGGGTTTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFNINVL*QGGLCG
Trigger: GCCACACAAACCCCCTTGGCACAGGACATTAATATT...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTTTCTTGCTCAAAGGCTaGTGGAGAGAATTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFFLLKG*WREFRL
Trigger: AAGACGGAATTCTCTCCAGCAGCCTTTGAGCAAGAA...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACATGCTGTAAATGCTTTTaGTGCTGCTCCCTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATCCKCF*CCSLCF
Trigger: GAAACAAAGGGAGCAGCAGCAAAAGCATTTACAGCA...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATGTGAACTGTCCAACCTaGTGTGGGAAGCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYVNCPT*CGKLPC
Trigger: ACAAGGCAGCTTCCCACAGCAGGTTGGACAGTTCAC...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCCATGCCATAGAGGCTaGTCTGAGGCATGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFPCHRG*SEACFG
Trigger: CCCAAAACATGCCTCAGAGCAGCCTCTATGGCATGG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGGGGCGCTGGTCCTCTaGTGTGCACTCACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWGALVL*CALTGG
Trigger: ACCCCCAGTGAGTGCACAGCAGAGGACCAGCGCCCC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATAGACCTGCTATCCCATaGCTCCTGTCCCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYRPAIP*LLSLFG
Trigger: GCCAAAAAGGGACAGGAGGCATGGGATAGCAGGTCT...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCGTTAAGGTTGAGGTCTaGCATGAGGTTGCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRVKVEV*HEVALR
Trigger: TCGCAAAGCAACCTCATGCCAGACCTCAACCTTAAC...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGTGTGGAATAAGGTTTaGGAGCCCCCTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKVWNKV*EPPRLG
Trigger: CCCCAGCCTAGGGGGCTCCCAAACCTTATTCCACAC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAACTCCTGGGCCCTGACTaGGCAATACCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKLLGPD*AIPHLQ
Trigger: TTGCAGGTGTGGTATTGCCCAGTCAGGGCCCAGGAG...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAACATCTAAGGAACTGTaGGAGGGCCCCGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKTSKEL*EGPVCC
Trigger: GCAGCAGACGGGGCCCTCCCACAGTTCCTTAGATGT...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGTCTGCCGTGGAATGTaGGCATGTCCATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKVCRGM*ACPLVA
Trigger: GGCCACCAATGGACATGCCCACATTCCACGGCAGAC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATGCCAGGAGGAATTCTaGCCTCCCATGGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKCQEEF*PPMAGD
Trigger: GTCACCAGCCATGGGAGGCCAGAATTCCTCCTGGCA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATACTTGTCCCCAGCACTaGGGTAAGTGGAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYTCPQH*GKWSSL
Trigger: AAGACTGCTCCACTTACCCCAGTGCTGGGGACAAGT...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCTCTTCGACAGGCTCCTaGTTCAGTTCTTTATTCAGG +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRSSTGS*FSSLFR
Trigger: CCTGAATAAAGAACTGAAGCAGGAGCCTGTCGAAGA...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATAGCTCCTTCCACTCCTaGTCGTTAAGGTTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYSSFHS*SLRLRS
Trigger: AGACCTCAACCTTAACGAGCAGGAGTGGAAGGAGCT...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCTGCTGTTGCTGTAAATaGTTTTGCTGCTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRCCCCK*FCCCSL
Trigger: AAGGGAGCAGCAGCAAAAGCATTTACAGCAACAGCA...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGATTGGTCCAAAGTAGTTaGTCTTTCTTTGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGLVQSS*SFFESE
Trigger: CTCAGATTCAAAGAAAGAGCAACTACTTTGGACCAA...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAACCCTAGGTTTCCAATaGCACTTAATTGATTTAAAC +
Preference number: 4 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGETLGFQ*HLIDLN
Trigger: GTTTAAATCAATTAAGTGGCATTGGAAACCTAGGGT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTTGGAAGACGGGGCTGTaGACAGAAGCAAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFWKTGL*TEAKSS
Trigger: AGATGACTTTGCTTCTGTGCACAGCCCCGTCTTCCA...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTAGAGCCAGAAGACTCTaGGTCCTTCTTCTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFRARRL*VLLLLE
Trigger: TTCGAGGAGAAGAAGGACCCAGAGTCTTCTGGCTCT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGTGTGCGTTCTGGGCCTaGGCTGATGCCGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWCAFWA*ADAGIR
Trigger: CCTGATGCCGGCATCAGCCCAGGCCCAGAACGCACA...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGCTCTTTGTGCGTTCTaGGCCTGGGCTGATGCCGGC +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWALCAF*AWADAG
Trigger: GCCGGCATCAGCCCAGGCCCAGAACGCACAAAGAGC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGCAGGTTCACATGGCTaGGCTGGAGGTAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWAGSHG*AGGRGL
Trigger: GAGGCCCCTACCTCCAGCCCAGCCATGTGAACCTGC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGAAAACTGCAGAAGGTaGGGAGACATAATACTCCAG +
Preference number: 4 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLENCRR*GDIILQ
Trigger: CTGGAGTATTATGTCTCCCCACCTTCTGCAGTTTTC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCGAAAACTGCAGAAGGTaGGGAGACATAATACTCCAG +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRENCRR*GDIILQ
Trigger: CTGGAGTATTATGTCTCCCCACCTTCTGCAGTTTTC...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTACCACGCTCCCACCATaGGCAACATACATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFTTLPP*ATYMFR
Trigger: TCTGAACATGTATGTTGCCCATGGTGGGAGCGTGGT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATAGTTGTCAAACCAAGTaGAATTGCTTCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYSCQTK*NCFLRA
Trigger: GGCCCGGAGGAAGCAATTCCACTTGGTTTGACAACT...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCATCTGACATGGGAGTaGCAGAAGTTGTCAAACCAA +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRHLTWE*QKLSNQ
Trigger: TTGGTTTGACAACTTCTGCCACTCCCATGTCAGATG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCATGAGTATTTTCCTTaGCTCAATTCTCACATAGGA +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSHEYFP*LNSHIG
Trigger: TCCTATGTGAGAATTGAGCCAAGGAAAATACTCATG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAAGGGAGTTCTGCTCGTaGCTTATATGGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKREFCS*LIWDSC
Trigger: GCAGCTGTCCCATATAAGTCACGAGCAGAACTCCCT...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGCCGGTCCTGTTGGCCTaGGTTTGTGGGGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWPVLLA*VCGERG
Trigger: TCCTCTCTCCCCACAAACTCAGGCCAACAGGACCGG...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAACCATGCCATAGAGGCTaGTCTGAGGCATGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKPCHRG*SEACFG
Trigger: CCCAAAACATGCCTCAGAGCAGCCTCTATGGCATGG...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTTTTAGAACCCTATCCTaGTGTCCCAACACCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFFRTLS*CPNTRY
Trigger: GTACCTGGTGTTGGGACAGCAGGATAGGGTTCTAAA...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGTGTAGCCTGGGGTCCTaGTGCCAGGACATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWCSLGS*CQDMGG
Trigger: TCCTCCCATGTCCTGGCAGCAGGACCCCAGGCTACA...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATCTGTGCTTACCACTTTaGTTTCGTTACGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYLCLPL*FRYGEV
Trigger: CACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATGTTAAGGTTGAGGTCTaGCATGAGGTTGCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYVKVEV*HEVALR
Trigger: TCGCAAAGCAACCTCATGCCAGACCTCAACCTTAAC...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGGGAGCCCCCTAGGCTaGGGGAATCTGTACTCACAG +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWGSPLG*GNLYSQ
Trigger: CTGTGAGTACAGATTCCCCCAGCCTAGGGGGCTCCC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAACCTCCTGTCCCTTTTTaGCATACGCAGTCAACAGCC +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKPPVPF*HTQSTA
Trigger: GGCTGTTGACTGCGTATGCCAAAAAGGGACAGGAGG...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATGCAAGTCATCTGACATaGGAGTGGCAGAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYASHLT*EWQKLS
Trigger: TGACAACTTCTGCCACTCCCATGTCAGATGACTTGC...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACACATGAGTATTTTCCTTaGCTCAATTCTCACATAGGA +
Preference number: 4 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATHEYFP*LNSHIG
Trigger: TCCTATGTGAGAATTGAGCCAAGGAAAATACTCATG...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGGCAGTAGAAGAATATaGGGATTAATAGGACTTTTA +
Preference number: 4 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSGSRRI*GLIGLL
Trigger: TAAAAGTCCTATTAATCCCCATATTCTTCTACTGCC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGGGGAGAGAGGAAACTaGAGCATGTCCAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWGERGN*SMSRAH
Trigger: ATGGGCCCTGGACATGCTTCAGTTTCCTCTCTCCCC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGTCCAAGTACCCCCAGTaGGAAAGGCACTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWSKYPQ*ERHCWC
Trigger: GCACCAGCAGTGCCTTTCTCACTGGGGGTACTTGGA...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCTTTTCACTGGCTTTATaGTTCACCCCTTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRFSLAL*FTPSLR
Trigger: TCTCAAAGAAGGGGTGAATCATAAAGCCAGTGAAAA...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCAACTATCTGGGTTATaGCAGAAGCCATGCCATAGA +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFQLSGL*QKPCHR
Trigger: TCTATGGCATGGCTTCTGGCATAACCCAGATAGTTG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATTTCGTTACGGGGAAGTaGTCTCTCCATCTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYFVTGK*SLHLRF
Trigger: AAAACGAAGATGGAGAGAGCACTTCCCCGTAACGAA...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAACACCGCGACTCAGGCTaGTTGCATGAGTATTTTCCT +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKHRDSG*LHEYFP
Trigger: AGGAAAATACTCATGCAACCAGCCTGAGTCGCGGTG...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATTGTTTTAAGGAGAAATaGCCGACATACCACTTGGGG +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYCFKEK*PTYHLG
Trigger: CCCCAAGTGGTATGTCGGCCATTTCTCCTTAAAACA...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGAGCCGACAGTCCCAGTaGTCATGCAAGGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWSRQSQ*SCKAGL
Trigger: AAGACCTGCCTTGCATGATCACTGGGACTGTCGGCT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATGGTCCAAAAGCAACTaGTGCTGCTTCATTACAGCG +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKWSKSN*CCFITA
Trigger: CGCTGTAATGAAGCAGCATCAGTTGCTTTTGGACCA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATAACTCCCTCAGAGGGTaGAATTTTCACTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYNSLRG*NFHWLY
Trigger: ATAAAGCCAGTGAAAATTTCACCCTCTGAGGGAGTT...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAAAAGGGGTTTTGTATTaGCGTAGTCCAGCACAGACC +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKKGVLY*RSPAQT
Trigger: GGTCTGTGCTGGACTACGGCAATACAAAACCCCTTT...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTTGCTGTAAATGCTTTTaGTGCTGCTCCCTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFCCKCF*CCSLCF
Trigger: GAAACAAAGGGAGCAGCAGCAAAAGCATTTACAGCA...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGCTGTGTCACCAGACCTaGTATCCCATGCCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWLCHQT*YPMPPV
Trigger: GACAGGAGGCATGGGATAGCAGGTCTGGTGACACAG...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGAAGGGTTCTGCTCCTaGCCAGGTGGAACCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWEGFCS*PGGTSD
Trigger: ATCACTGGTTCCACCTGGCCAGGAGCAGAACCCTTC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGATGTCCAGGGCCCATTaGCATCAGATTCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWMSRAH*HQIPSL
Trigger: CAGGCTGGGAATCTGATGCCAATGGGCCCTGGACAT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGAGACCTGCTATCCCATaGCTCCTGTCCCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWRPAIP*LLSLFG
Trigger: GCCAAAAAGGGACAGGAGGCATGGGATAGCAGGTCT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATTCGTTACGGGGAAGTaGTCTCTCCATCTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKFVTGK*SLHLRF
Trigger: AAAACGAAGATGGAGAGAGCACTTCCCCGTAACGAA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGAGTCTTGCTTGTAGCTaGAAGGGCTGGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWSLACS*KGWQAS
Trigger: AGAAGCCTGCCAGCCCTTCCAGCTACAAGCAAGACT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGACTTGTCCCCAGCACTaGGGTAAGTGGAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWTCPQH*GKWSSL
Trigger: AAGACTGCTCCACTTACCCCAGTGCTGGGGACAAGT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCGGCAGTAGAAGAATATaGGGATTAATAGGACTTTTA +
Preference number: 4 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRGSRRI*GLIGLL
Trigger: TAAAAGTCCTATTAATCCCCATATTCTTCTACTGCC...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR TCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGAAGTGCAAGTCATCTaGCATGGGAGTGGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWEVQVI*HGSGRS
Trigger: ACTTCTGCCACTCCCATGTCAGATGACTTGCACTTC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAATGTTCAGAGAAAACTaGAGAAGGTGGGGAGACATA +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKMFREN*RRWGDI
Trigger: TATGTCTCCCCACCTTCTGCAGTTTTCTCTGAACAT...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGAGAGCCAGAAGACTCTaGGTCCTTCTTCTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWRARRL*VLLLLE
Trigger: TTCGAGGAGAAGAAGGACCCAGAGTCTTCTGGCTCT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATTGCTCAAAGGCTGCTaGAGAGAATTCCGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKLLKGC*REFRLN
Trigger: ATTAAGACGGAATTCTCTCCAGCAGCCTTTGAGCAA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGGGCCGACATACCACTTaGGGTGGCAAATGGCTATTA +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWGRHTT*GGKWLL
Trigger: TAATAGCCATTTGCCACCCCAAGTGGTATGTCGGCC...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATACCCTAGGTTTCCAATaGCACTTAATTGATTTAAAC +
Preference number: 4 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYTLGFQ*HLIDLN
Trigger: GTTTAAATCAATTAAGTGGCATTGGAAACCTAGGGT...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR GCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGCAACTATCTGGGTTATaGCAGAAGCCATGCCATAGA +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWQLSGL*QKPCHR
Trigger: TCTATGGCATGGCTTCTGGCATAACCCAGATAGTTG...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CCA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGACATACCACTTGGGGTaGCAAATGGCTATTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LQIILLSKVSTETCPQHWTYHLG*QMAIRK
Trigger: TTTTCTAATAGCCATTTGCCACCCCAAGTGGTATGT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp GCTCCAGGCGCTCGGGCGACACGGCCTCGTAGCGGGCCTCGCAGGTaGTGTGGTGGCGCCGGCACAGCTCGATGCGCCGGCGAAGGCGCT +
Preference number: 5 (lower is better)
Translates to: APGARATRPRSGPRR*CGGAGTARCAGEGA
Trigger: AGCGCCTTCGCCGGCGCATCGAGCTGTGCCGGCGCCACCACAGCACCTGCGAGGCCCGCTACGAGGCCGTGTCGCCCGAGCGCCTGGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS TCA 90 bp TGTGGTGGCGCCGGCACAGCTCGATGCGCCGGCGAAGGCGCTCCATaGCCGCGCTGTGCCGCGGCAGCGCGAACTCCGCCATGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: CGGAGTARCAGEGAP*PRCAAAARTPPWGR
Trigger: CCTGCCCCATGGCGGAGTTCGCGCTGCCGCGGCACAGCGCGGTCATGGAGCGCCTTCGCCGGCGCATCGAGCTGTGCCGGCGCCACCACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp CGGCACAGCTCGATGCGCCGGCGAAGGCGCTCCATGACCGCGCTGTaGCGCGGCAGCGCGAACTCCGCCATGGGGCAGGTGGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: RHSSMRRRRRSMTAL*RGSANSAMGQVGST
Trigger: GGTGCTGCCCACCTGCCCCATGGCGGAGTTCGCGCTGCCGCGGCACAGCGCGGTCATGGAGCGCCTTCGCCGGCGCATCGAGCTGTGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp CCGGGGCCGTGGCGGCGGGCGGCTGCCTGTGCTTCCCGGCGCGCTTaGCCTTGGCCTGGATGCAGCGCTGGTGCAGGGCGAAGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: PGPWRRAAACASRRA*PWPGCSAGAGRRCV
Trigger: AACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGCAGCCGCCCGCCGCCACGGCCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp CCGTGGCGGCGGGCGGCTGCCTGTGCTTCCCGGCGCGCTTGGCCTTaGCCTGGATGCAGCGCTGGTGCAGGGCGAAGGTGTGTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: PWRRAAACASRRAWP*PGCSAGAGRRCVGA
Trigger: AGCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGCAGCCGCCCGCCGCCACGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp CGGGCGGCTGCCTGTGCTTCCCGGCGCGCTTGGCCTTGGCCTGGATaGAGCGCTGGTGCAGGGCGAAGGTGTGTTGGCGCTCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: RAAACASRRAWPWPG*SAGAGRRCVGAPAP
Trigger: TGGAGCTGGAGCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGCAGCCGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp TGCCTGTGCTTCCCGGCGCGCTTGGCCTTGGCCTGGATGCAGCGCTaGTGCAGGGCGAAGGTGTGTTGGCGCTCCAGCTCCAGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: CLCFPARLALAWMQR*CRAKVCWRSSSRRS
Trigger: CGAGCGCCTGGAGCTGGAGCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAACCCCCAGCCGGCGCTaGCTGCCTACCTCAAGCCTC +
Preference number: 5 (lower is better)
Translates to: ADGLGPARWTSTAGLRGATPSRR*LPTSSL
Trigger: GAGGCTTGAGGTAGGCAGCAAGCGCCGGCTGGGGGT...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp CCCGGGGCTGGTGCCGGGGTGGCCTGCTGTGGGTTCTGGAGCATCTaGTCGCGCTTCTGCTTGGCAGCGATCTGCTGGAGCTGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: PGAGAGVACCGFWSI*SRFCLAAICWSWWA
Trigger: TGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGCCACCCCGGCACCAGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp TGCTGCCATGTGGACATCTGGCCCGGGGCTGGTGCCGGGGTGGCCTaGTGTGGGTTCTGGAGCATCTGCTCGCGCTTCTGCTTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: CCHVDIWPGAGAGVA*CGFWSICSRFCLAA
Trigger: CGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGCCACCCCGGCACCAGCCCCGGGCCAGATGTCCACATGGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp GACATCTGGCCCGGGGCTGGTGCCGGGGTGGCCTGCTGTGGGTTCTaGAGCATCTGCTCGCGCTTCTGCTTGGCAGCGATCTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: DIWPGAGAGVACCGF*SICSRFCLAAICWS
Trigger: GCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGCCACCCCGGCACCAGCCCCGGGCCAGATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAAGACCCCGGGCTGCCTaGCCCACAGTCCGCTTTGTA +
Preference number: 5 (lower is better)
Translates to: ADGLGPARWTSTAGLRGARPRAA*PTVRFV
Trigger: TACAAAGCGGACTGTGGGCAAGGCAGCCCGGGGTCT...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp GGGTTCTGGAGCATCTGCTCGCGCTTCTGCTTGGCAGCGATCTGCTaGAGCTGGTGGGCAGAGGACAGCTCTGAGGCCCCTCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: GFWSICSRFCLAAIC*SWWAEDSSEAPPGP
Trigger: GGGCCCAGGAGGGGCCTCAGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp CCATGTGGACATCTGGCCCGGGGCTGGTGCCGGGGTGGCCTGCTGTaGGTTCTGGAGCATCTGCTCGCGCTTCTGCTTGGCAGCGATCTG +
Preference number: 5 (lower is better)
Translates to: PCGHLARGWCRGGLL*VLEHLLALLLGSDL
Trigger: CAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGCCACCCCGGCACCAGCCCCGGGCCAGATGTCCACATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp GCCGGGGTGGCCTGCTGTGGGTTCTGGAGCATCTGCTCGCGCTTCTaGTTGGCAGCGATCTGCTGGAGCTGGTGGGCAGAGGACAGCTCT +
Preference number: 5 (lower is better)
Translates to: AGVACCGFWSICSRF*LAAICWSWWAEDSS
Trigger: AGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGCCACCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp ACGGACACGGCAGGCGGCTGGGTCCCAACACTGGTAGCCTGGGCTTaGACAGGGACACTGGAAGGGTTCTGCTCCTGGCCAGGTGGAACC +
Preference number: 5 (lower is better)
Translates to: TDTAGGWVPTLVAWA*TGTLEGFCSWPGGT
Trigger: GGTTCCACCTGGCCAGGAGCAGAACCCTTCCAGTGTCCCTGTGCAAGCCCAGGCTACCAGTGTTGGGACCCAGCCGCCTGCCGTGTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp CACTCACTGGGGGTAGCAAGGACCCCACGGCAGCTGCTGAGCTCATaGGAGCCATGGGCCTGTTGGGCACTGCCTGGGAGAATTGCGGGC +
Preference number: 5 (lower is better)
Translates to: HSLGVARTPRQLLSS*EPWACWALPGRIAG
Trigger: GCCCGCAATTCTCCCAGGCAGTGCCCAACAGGCCCATGGCTCCCATGAGCTCAGCAGCTGCCGTGGGGTCCTTGCTACCCCCAGTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACCGGCGCGCTTGGCCTaGGCCTGGATGCAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEPARLA*AWMQRW
Trigger: CCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAGCTCTGAGGCATGTTTaGGGAGCCAGGGAACTGAGC +
Preference number: 5 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAALRHV*GARELS
Trigger: GCTCAGTTCCCTGGCTCCCAAAACATGCCTCAGAGC...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp TGTGGGTTCTGGAGCATCTGCTCGCGCTTCTGCTTGGCAGCGATCTaGTGGAGCTGGTGGGCAGAGGACAGCTCTGAGGCCCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CGFWSICSRFCLAAI*WSWWAEDSSEAPPG
Trigger: CCCAGGAGGGGCCTCAGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp GCTGGTGGGCAGAGGACAGCTCTGAGGCCCCTCCTGGGCCCTGACTaGGCAATACCACACCTGCAAGGGCTCTTTGTGCGTTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: AGGQRTALRPLLGPD*AIPHLQGLFVRSGP
Trigger: AGGCCCAGAACGCACAAAGAGCCCTTGCAGGTGTGGTATTGCCCAGTCAGGGCCCAGGAGGGGCCTCAGAGCTGTCCTCTGCCCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp GGGTGGCCTGCTGTGGGTTCTGGAGCATCTGCTCGCGCTTCTGCTTaGCAGCGATCTGCTGGAGCTGGTGGGCAGAGGACAGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GWPAVGSGASARASA*QRSAGAGGQRTALR
Trigger: CCTCAGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp GATCAGATCGGTGTGTCCAGCCACACTAGAGAGCCCACTGCCACCTaGCTGCCCGCTATAGGCAAAAGGCAGCTCCTGGCCCGCGGTCCG +
Preference number: 5 (lower is better)
Translates to: DQIGVSSHTREPTAT*LPAIGKRQLLARGP
Trigger: CGGACCGCGGGCCAGGAGCTGCCTTTTGCCTATAGCGGGCAGCCAGGTGGCAGTGGGCTCTCTAGTGTGGCTGGACACACCGATCTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCACCCGTAGCCATTCTGTaGATCGCCATTCTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAPVAIL*IAILRG
Trigger: TCCCCTCAGAATGGCGATCAACAGAATGGCTACGGG...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS TCA 90 bp GCTGATGCCGGCATCAGGTTTGGACTGGGATTGTCCGCCCGGGGCTaGCCAGAGGTGTGGAATAAGGTTTGGGAGCCCCCTAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ADAGIRFGLGLSARG*PEVWNKVWEPPRLG
Trigger: CCCCAGCCTAGGGGGCTCCCAAACCTTATTCCACACCTCTGGTCAGCCCCGGGCGGACAATCCCAGTCCAAACCTGATGCCGGCATCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp GCTGAGACGGAGGTGTTCTGGCCCACGTTGGTCTGCCGTGGAATGTaGGCATGTCCATTGGTGGCCTGTGGCGGGGGCTGGGCAACTATC +
Preference number: 5 (lower is better)
Translates to: AETEVFWPTLVCRGM*ACPLVACGGGWATI
Trigger: GATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGGGCCAGAACACCTCCGTCTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS-3UTR CAA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGCAGGGCGAAGGTGTGTaGGCGCTCCAGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGQGEGV*ALQLQA
Trigger: CGCCTGGAGCTGGAGCGCCAACACACCTTCGCCCTG...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGTGCTTCCCGGCGCGCTaGGCCTTGGCCTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: NPILLSQHQVLMPADGLGCFPAR*ALAWMQ
Trigger: CTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCA...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGTGCTTCCCGGCGCGCTaGGCCTTGGCCTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGCFPAR*ALAWMQ
Trigger: CTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCA...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAGCCAGACGCTTTTTGTaGAGAGAGTCTAGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAARRFL*RESSPR
Trigger: TCTGGGGCTAGACTCTCTCAACAAAAAGCGTCTGGC...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCATGGCCGACATACCACTaGGGGTGGCAAATGGCTATT +
Preference number: 5 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAWPTYH*GWQMAI
Trigger: AATAGCCATTTGCCACCCCAAGTGGTATGTCGGCCA...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS TCA 90 bp CAATACCACACCTGCAAGGGCTCTTTGTGCGTTCTGGGCCTGGGCTaGTGCCGGCATCAGGTTTGGACTGGGATTGTCCGCCCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QYHTCKGSLCVLGLG*CRHQVWTGIVRPGL
Trigger: CAGCCCCGGGCGGACAATCCCAGTCCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAACGCACAAAGAGCCCTTGCAGGTGTGGTATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp CTGGGCAATACCACACCTGCAAGGGCTCTTTGTGCGTTCTGGGCCTaGGCTGATGCCGGCATCAGGTTTGGACTGGGATTGTCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: LGNTTPARALCAFWA*ADAGIRFGLGLSAR
Trigger: CCGGGCGGACAATCCCAGTCCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAACGCACAAAGAGCCCTTGCAGGTGTGGTATTGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp GTGACTTATATGGGACAGCTGCTGGGGAAGATAAGCCATCAGGGCTaGCTTGCTCTGGCCAGACCCCGGGCTGCCTTGCCCACAGTCCGC +
Preference number: 5 (lower is better)
Translates to: VTYMGQLLGKISHQG*LALARPRAALPTVR
Trigger: GCGGACTGTGGGCAAGGCAGCCCGGGGTCTGGCCAGAGCAAGCCAGCCCTGATGGCTTATCTTCCCCAGCAGCTGTCCCATATAAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGCTGTGGGAAGCTGCCTaGTGTCGGGTCTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: AVPTPGTDASRWAGASPMLWEAA*CRVLVL
Trigger: CAGTACCAAGACCCGACACAAGGCAGCTTCCCACAG...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGCATGTCCAGGGCCCATaGGCATCAGATTCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: AVPTPGTDASRWAGASPMHVQGP*ASDSQP
Trigger: AGGCTGGGAATCTGATGCCAATGGGCCCTGGACATG...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGTCAAACCAAGTGGAATaGCTTCCTCCGGGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: AVPTPGTDASRWAGASPMSNQVE*LPPGRP
Trigger: AGGCCGGCCCGGAGGAAGCAATTCCACTTGGTTTGA...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCACCTGTGCTTACCACTTaGCTTTCGTTACGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAPVLTT*LSLRGS
Trigger: ACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAGG...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS TCA 90 bp CTGGGAGAGGCCAGAGCTTCCCAGAGAGTTCTGCCCATAGGCAGCTaGGACGGAGGTGTTCTGGCCCACGTTGGTCTGCCGTGGAATGTG +
Preference number: 5 (lower is better)
Translates to: LGEARASQRVLPIGS*DGGVLAHVGLPWNV
Trigger: CACATTCCACGGCAGACCAACGTGGGCCAGAACACCTCCGTCTCAGCTGCCTATGGGCAGAACTCTCTGGGAAGCTCTGGCCTCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS TCA 90 bp ACGTTGCTGTTCCCTGGGGTCTGGCCACTGAGGTTCGGCATTCCCTaGTGCTGCCAGGAGGAATTCTGGCCTCCCATGGCTGGTGACACC +
Preference number: 5 (lower is better)
Translates to: TLLFPGVWPLRFGIP*CCQEEFWPPMAGDT
Trigger: GGTGTCACCAGCCATGGGAGGCCAGAATTCCTCCTGGCAGCATCAGGGAATGCCGAACCTCAGTGGCCAGACCCCAGGGAACAGCAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 90 bp CTGCTGTGGGAAGCTGCCTTGTGTCGGGTCTTGGTACTGGGGTGGTaGGCGGGTCAGATGGCGCTGAAACTGTTGCTTCTCCTGTTCCGC +
Preference number: 5 (lower is better)
Translates to: LLWEAALCRVLVLGW*AGQMALKLLLLLFR
Trigger: GCGGAACAGGAGAAGCAACAGTTTCAGCGCCATCTGACCCGCCCACCACCCCAGTACCAAGACCCGACACAAGGCAGCTTCCCACAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000638220.2
ENST00000640191.1
CDS CCA 90 bp CACGTTGGTCTGCCGTGGAATGTGGGCATGTCCATTGGTGGCCTGTaGCGGGGGCTGGGCAACTATCTGGGTTATGCCAGAAGCCATGCC +
Preference number: 5 (lower is better)
Translates to: HVGLPWNVGMSIGGL*RGLGNYLGYARSHA
Trigger: GGCATGGCTTCTGGCATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 90 bp TCTGGCCCACGTTGGTCTGCCGTGGAATGTGGGCATGTCCATTGGTaGCCTGTGGCGGGGGCTGGGCAACTATCTGGGTTATGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: SGPRWSAVECGHVHW*PVAGAGQLSGLCQK
Trigger: CTTCTGGCATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGGGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 90 bp TGTTCTGGCCCACGTTGGTCTGCCGTGGAATGTGGGCATGTCCATTaGTGGCCTGTGGCGGGGGCTGGGCAACTATCTGGGTTATGCCAG +
Preference number: 5 (lower is better)
Translates to: CSGPRWSAVECGHVH*WPVAGAGQLSGLCQ
Trigger: CTGGCATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGGGCCAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 90 bp AGTTCTGCCCATAGGCAGCTGAGACGGAGGTGTTCTGGCCCACGTTaGTCTGCCGTGGAATGTGGGCATGTCCATTGGTGGCCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: SSAHRQLRRRCSGPR*SAVECGHVHWWPVA
Trigger: CGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGGGCCAGAACACCTCCGTCTCAGCTGCCTATGGGCAGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS-3UTR CAA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAACCCCCAGCCGGCGCTaGCTGCCTACCTCAAGCCTC +
Preference number: 5 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATTPSRR*LPTSSL
Trigger: GAGGCTTGAGGTAGGCAGCAAGCGCCGGCTGGGGGT...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAACCTGCAAGGGCTCTTaGTGCGTTCTGGGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGETCKGS*CVLGLG
Trigger: GCCCAGGCCCAGAACGCACAAAGAGCCCTTGCAGGT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAGGCCTCACCTGGAGCTaGGGCTCTACCTGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGGLTWS*GSTCPA
Trigger: AGCTGGGCAGGTAGAGCCCAAGCTCCAGGTGAGGCC...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp TTATATGGGACAGCTGCTGGGGAAGATAAGCCATCAGGGCTGGCTTaGTCTGGCCAGACCCCGGGCTGCCTTGCCCACAGTCCGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LYGTAAGEDKPSGLA*SGQTPGCLAHSPLC
Trigger: ACAAAGCGGACTGTGGGCAAGGCAGCCCGGGGTCTGGCCAGAGCAAGCCAGCCCTGATGGCTTATCTTCCCCAGCAGCTGTCCCATATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp GTGGAAACTGGAGGCTGCAGTGAAGGGACTCACGTTGCTGTTCCCTaGGGTCTGGCCACTGAGGTTCGGCATTCCCTGATGCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: VETGGCSEGTHVAVP*GLATEVRHSLMLPG
Trigger: TCCTGGCAGCATCAGGGAATGCCGAACCTCAGTGGCCAGACCCCAGGGAACAGCAACGTGAGTCCCTTCACTGCAGCCTCCAGTTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS-3UTR CAA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGTCAGCCAGACGCTTTTaGTTGAGAGAGTCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: AVPTPGTDASRWAGASPMSARRF*LRESSP
Trigger: GGGGCTAGACTCTCTCAACAAAAAGCGTCTGGCTGA...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAACCTGCAAGGGCTCTTaGTGCGTTCTGGGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGTCKGS*CVLGLG
Trigger: GCCCAGGCCCAGAACGCACAAAGAGCCCTTGCAGGT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAACTGGTAGCCTGGGCTaGCACAGGGACACTGGAAGG +
Preference number: 5 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGETGSLG*HRDTGR
Trigger: CCTTCCAGTGTCCCTGTGCAAGCCCAGGCTACCAGT...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGGTGTTCTGGCCCACGTaGGTCTGCCGTGGAATGTGG +
Preference number: 5 (lower is better)
Translates to: NPILLSQHQVLMPADGLGVFWPT*VCRGMW
Trigger: CCACATTCCACGGCAGACCAACGTGGGCCAGAACAC...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGTGAAGGGACTCACGTaGCTGTTCCCTGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEVKGLT*LFPGVW
Trigger: CCAGACCCCAGGGAACAGCAACGTGAGTCCCTTCAC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp GTCCATTGGTGGCCTGTGGCGGGGGCTGGGCAACTATCTGGGTTATaGCAGAAGCCATGCCATAGAGGCTGCTCTGAGGCATGTTTTGGG +
Preference number: 5 (lower is better)
Translates to: VHWWPVAGAGQLSGL*QKPCHRGCSEACFG
Trigger: CCCAAAACATGCCTCAGAGCAGCCTCTATGGCATGGCTTCTGGCATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS GCA 90 bp GGCACTGCCTGGGAGAATTGCGGGCTAGACATTTTCAGGTGGGCCTaGTGCTGCATGTGGAAACTGGAGGCTGCAGTGAAGGGACTCACG +
Preference number: 5 (lower is better)
Translates to: GTAWENCGLDIFRWA*CCMWKLEAAVKGLT
Trigger: CGTGAGTCCCTTCACTGCAGCCTCCAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp GAGCTCATGGGAGCCATGGGCCTGTTGGGCACTGCCTGGGAGAATTaGGGGCTAGACATTTTCAGGTGGGCCTGCTGCTGCATGTGGAAA +
Preference number: 5 (lower is better)
Translates to: ELMGAMGLLGTAWEN*GLDIFRWACCCMWK
Trigger: TTTCCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGTGCCCAACAGGCCCATGGCTCCCATGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp TTTGTGCGTTCTGGGCCTGGGCTGATGCCGGCATCAGGTTTGGACTaGGATTGTCCGCCCGGGGCTGACCAGAGGTGTGGAATAAGGTTT +
Preference number: 5 (lower is better)
Translates to: FVRSGPGLMPASGLD*DCPPGADQRCGIRF
Trigger: AAACCTTATTCCACACCTCTGGTCAGCCCCGGGCGGACAATCCCAGTCCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAACGCACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp AACCTGCTGTGGGAAGCTGCCTTGTGTCGGGTCTTGGTACTGGGGTaGTGGGCGGGTCAGATGGCGCTGAAACTGTTGCTTCTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: NLLWEAALCRVLVLG*WAGQMALKLLLLLF
Trigger: GAACAGGAGAAGCAACAGTTTCAGCGCCATCTGACCCGCCCACCACCCCAGTACCAAGACCCGACACAAGGCAGCTTCCCACAGCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000638220.2
ENST00000640191.1
CDS CCA 90 bp AGCCAGGGAACTGAGCCACACCCCGGTCCTGTTGGCCTGAGTTTGTaGGGAGAGAGGAAACTGAAGCATGTCCAGGGCCCATTGGCATCA +
Preference number: 5 (lower is better)
Translates to: SQGTEPHPGPVGLSL*GERKLKHVQGPLAS
Trigger: TGATGCCAATGGGCCCTGGACATGCTTCAGTTTCCTCTCTCCCCACAAACTCAGGCCAACAGGACCGGGGTGTGGCTCAGTTCCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 90 bp GGTTCGGCATTCCCTGATGCTGCCAGGAGGAATTCTGGCCTCCCATaGCTGGTGACACCCTTGGGACCGGTGGCTTTGTTAAACCAGGGT +
Preference number: 5 (lower is better)
Translates to: GSAFPDAARRNSGLP*LVTPLGPVALLNQG
Trigger: ACCCTGGTTTAACAAAGCCACCGGTCCCAAGGGTGTCACCAGCCATGGGAGGCCAGAATTCCTCCTGGCAGCATCAGGGAATGCCGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS-3UTR CAA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCCAGGGCGAAGGTGTGTaGGCGCTCCAGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRQGEGV*ALQLQA
Trigger: CGCCTGGAGCTGGAGCGCCAACACACCTTCGCCCTG...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCTGGAGGCAGTCCATaGGAAGAGATGGCAACTCCC +
Preference number: 5 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGAGGSP*EEMATP
Trigger: GGGAGTTGCCATCTCTTCCAATGGACTGCCTCCAGC...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAATGCCGGCATCAGGTTaGGACTGGGATTGTCCGCCC +
Preference number: 5 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGMPASG*DWDCPP
Trigger: GGGCGGACAATCCCAGTCCAAACCTGATGCCGGCAT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAAGACCCCGGGCTGCCTaGCCCACAGTCCGCTTTGTA +
Preference number: 5 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATRPRAA*PTVRFV
Trigger: TACAAAGCGGACTGTGGGCAAGGCAGCCCGGGGTCT...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGCATTACAGCGGCCTGTaGCTGGCTGCTGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGHYSGL*LAAEIG
Trigger: CCCTATCTCAGCAGCCAGCAACAGGCCGCTGTAATG...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACATTACAGCGGCCTGTaGCTGGCTGCTGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEHYSGL*LAAEIG
Trigger: CCCTATCTCAGCAGCCAGCAACAGGCCGCTGTAATG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGCGCGAGAAGGTGCTGTaGCCTCTGAAGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGREKVL*PLKELL
Trigger: CAGCAGTTCCTTCAGAGGCAACAGCACCTTCTCGCG...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACGCGAGAAGGTGCTGTaGCCTCTGAAGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEREKVL*PLKELL
Trigger: CAGCAGTTCCTTCAGAGGCAACAGCACCTTCTCGCG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCAGATGGGCTGGGGCCAGCCCGATGGACCTCAACTGCTGGCCTGAGGGGCGCAGTAAGTGGAGCAGTCTaGGATAAAATCACCATGATG +
Preference number: 5 (lower is better)
Translates to: ADGLGPARWTSTAGLRGAVSGAV*DKITMM
Trigger: CATCATGGTGATTTTATCCAAGACTGCTCCACTTAC...TGCGCCCCTCAGGCCAGCAGTTGAGGTCCATCGGGCTGGCCCCAGCCCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAATCAAACCAAGTGGAATaGCTTCCTCCGGGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGESNQVE*LPPGRP
Trigger: AGGCCGGCCCGGAGGAAGCAATTCCACTTGGTTTGA...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp GAGTCAGCCAGACGCTTTTTGTTGAGAGAGTCTAGCCCCAGAGAGTaGTTCCCACTGGACTGCAGGGCGTCGGCTCCAGAAGGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: ESARRFLLRESSPRE*FPLDCRASAPEGLS
Trigger: TGACAAGCCTTCTGGAGCCGACGCCCTGCAGTCCAGTGGGAAGCACTCTCTGGGGCTAGACTCTCTCAACAAAAAGCGTCTGGCTGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp GCTGGGCAACTATCTGGGTTATGCCAGAAGCCATGCCATAGAGGCTaGTCTGAGGCATGTTTTGGGAGCCAGGGAACTGAGCCACACCCC +
Preference number: 5 (lower is better)
Translates to: AGQLSGLCQKPCHRG*SEACFGSQGTEPHP
Trigger: GGGGTGTGGCTCAGTTCCCTGGCTCCCAAAACATGCCTCAGAGCAGCCTCTATGGCATGGCTTCTGGCATAACCCAGATAGTTGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS GCA 90 bp AGACATTTTCAGGTGGGCCTGCTGCTGCATGTGGAAACTGGAGGCTaGAGTGAAGGGACTCACGTTGCTGTTCCCTGGGGTCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: RHFQVGLLLHVETGG*SEGTHVAVPWGLAT
Trigger: AGTGGCCAGACCCCAGGGAACAGCAACGTGAGTCCCTTCACTGCAGCCTCCAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS GCA 90 bp GCCTGGGAGAATTGCGGGCTAGACATTTTCAGGTGGGCCTGCTGCTaGATGTGGAAACTGGAGGCTGCAGTGAAGGGACTCACGTTGCTG +
Preference number: 5 (lower is better)
Translates to: AWENCGLDIFRWACC*MWKLEAAVKGLTLL
Trigger: CAGCAACGTGAGTCCCTTCACTGCAGCCTCCAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATTCTCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp AACCTGCTGTGGGAAGCTGCCTTGTGTCGGGTCTTGGTACTGGGGTaGTGGGCGGGTCAGATGGCGCTGAAACTGTTGCTTCTCCTAGAA +
Preference number: 5 (lower is better)
Translates to: NLLWEAALCRVLVLG*WAGQMALKLLLLLE
Trigger: TTCTAGGAGAAGCAACAGTTTCAGCGCCATCTGACCCGCCCACCACCCCAGTACCAAGACCCGACACAAGGCAGCTTCCCACAGCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511027.1
ENST00000639666.1
CDS-3UTR CAA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCCGTAGCCATTCTGTaGATCGCCATTCTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: NPILLSQHQVLMPADGLGPVAIL*IAILRG
Trigger: TCCCCTCAGAATGGCGATCAACAGAATGGCTACGGG...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGAGGTCTGGCATGAGGTaGCTTTGCGATATGGAGCCG +
Preference number: 5 (lower is better)
Translates to: NPILLSQHQVLMPADGLGRSGMR*LCDMEP
Trigger: CGGCTCCATATCGCAAAGCAACCTCATGCCAGACCT...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCAGCCCGATGGGCATCATGAGCAGTTaGGAGTTAGTGAAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: AVPTPGTDASRWAGASPMGIMSS*ELVKSC
Trigger: GCAAGACTTCACTAACTCCAAACTGCTCATGATGCC...CATCGGGCTGGCCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCATGTCCAGGGCCCATaGGCATCAGATTCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSHVQGP*ASDSQP
Trigger: AGGCTGGGAATCTGATGCCAATGGGCCCTGGACATG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGCCTCCTGTCCCTTTTaGGCATACGCAGTCAACAGC +
Preference number: 5 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGASCPF*AYAVNS
Trigger: GCTGTTGACTGCGTATGCCAAAAAGGGACAGGAGGC...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGACTCTTCCCCTTCAGATaGGGGAACTCCCTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGLFPFR*GNSLRG
Trigger: CCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAG...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGGCCTTCAGCCGATTTTaGGGAGAAAAGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: NPILLSQHQVLMPADGLGAFSRF*GEKPLR
Trigger: CCTCAGCGGCTTTTCTCCCAAAAATCGGCTGAAGGC...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp ACTGCCTGGGAGAATTGCGGGCTAGACATTTTCAGGTGGGCCTGCTaGTGCATGTGGAAACTGGAGGCTGCAGTGAAGGGACTCACGTTG +
Preference number: 5 (lower is better)
Translates to: TAWENCGLDIFRWAC*CMWKLEAAVKGLTL
Trigger: CAACGTGAGTCCCTTCACTGCAGCCTCCAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp CACAGACCCCTGGTTATTCGCGGAGTTCTGATTCAAGTTACTCGGTaGCTGGTGACTCAGCAGGTTCACATGGCTGGGCTGGAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: HRPLVIRGVLIQVTR*LVTQQVHMAGLEVG
Trigger: CCCTACCTCCAGCCCAGCCATGTGAACCTGCTGAGTCACCAGCCACCGAGTAACTTGAATCAGAACTCCGCGAATAACCAGGGGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp CTGCTGTGGGAAGCTGCCTTGTGTCGGGTCTTGGTACTGGGGTGGTaGGCGGGTCAGATGGCGCTGAAACTGTTGCTTCTCCTAGAAAAT +
Preference number: 5 (lower is better)
Translates to: LLWEAALCRVLVLGW*AGQMALKLLLLLEN
Trigger: ATTTTCTAGGAGAAGCAACAGTTTCAGCGCCATCTGACCCGCCCACCACCCCAGTACCAAGACCCGACACAAGGCAGCTTCCCACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511027.1
ENST00000639666.1
CDS-3UTR CAA 90 bp GAACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGTCCTGCTCGTTAAGGTaGAGGTCTGGCATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: EPYPAVPTPGTDASRWAGSCSLR*RSGMRL
Trigger: CAACCTCATGCCAGACCTCAACCTTAACGAGCAGGA...CCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTGCTCGCGCTTCTGCTaGGCAGCGATCTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLCSRFC*AAICWS
Trigger: GCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCA...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTATGGCGCTGAAACTGTaGCTTCTCCTGTTCCGCGAG +
Preference number: 5 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSMALKL*LLLFRE
Trigger: CTCGCGGAACAGGAGAAGCAACAGTTTCAGCGCCAT...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCCTGTTGGCCTGAGTTaGTGGGGAGAGAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSPVGLS*WGERKL
Trigger: CAGTTTCCTCTCTCCCCACAAACTCAGGCCAACAGG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACATGGCTGGTGACACCCTaGGGACCGGTGGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATWLVTP*GPVALL
Trigger: TAACAAAGCCACCGGTCCCAAGGGTGTCACCAGCCA...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAACCAGGCCATGGGCTTTaGGTCCAAAGTAGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEPGHGL*VQSSCS
Trigger: AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGG...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp TCGGGCACCGACCTGTTCAGCTCCTCGATGAGCTCCTTCCACTCCTaGTCGTTAAGGTTGAGGTCTGGCATGAGGTTGCTTTGCGATATG +
Preference number: 5 (lower is better)
Translates to: SGTDLFSSSMSSFHS*SLRLRSGMRLLCDM
Trigger: CATATCGCAAAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAGGAGTGGAAGGAGCTCATCGAGGAGCTGAACAGGTCGGTGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp AACCCTATCCTGCTGTCCCAACACCAGGTACTGATGCCAGCAGATGGGCTGGGGGGAGTTAGTGAAGTCTaGCTTGTAGCTGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: NPILLSQHQVLMPADGLGGVSEV*LVAGRA
Trigger: AGCCCTTCCAGCTACAAGCAAGACTTCACTAACTCC...CCCCAGCCCATCTGCTGGCATCAGTACCTGGTGTTGGGACAGCAGGATAGGGTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCACTGGTAGCCTGGGCTaGCACAGGGACACTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRTGSLG*HRDTGR
Trigger: CCTTCCAGTGTCCCTGTGCAAGCCCAGGCTACCAGT...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCGAGGACAGCTGGAGTaGGATGGACCCAAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFRGQLE*DGPKVF
Trigger: GAACACCTTGGGTCCATCCAACTCCAGCTGTCCTCG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGCTCTGAGGCATGTTTaGGGAGCCAGGGAACTGAGC +
Preference number: 5 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFALRHV*GARELS
Trigger: GCTCAGTTCCCTGGCTCCCAAAACATGCCTCAGAGC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTATGTGGGCATGTCCATaGGTGGCCTGTGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFMWACP*VACGGG
Trigger: GCCCCCGCCACAGGCCACCAATGGACATGCCCACAT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCGTGTTCTGGCCCACGTaGGTCTGCCGTGGAATGTGG +
Preference number: 5 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRVFWPT*VCRGMW
Trigger: CCACATTCCACGGCAGACCAACGTGGGCCAGAACAC...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCACTGCCTGGGAGAATaGCGGGCTAGACATTTTCAG +
Preference number: 5 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSHCLGE*RARHFQ
Trigger: CTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGTG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTCCAGGCCATGGGCTTTaGGTCCAAAGTAGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSPGHGL*VQSSCS
Trigger: AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGG...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCTCTTCCCCTTCAGATaGGGGAACTCCCTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFLFPFR*GNSLRG
Trigger: CCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 90 bp CTCCTCGATGAGCTCCTTCCACTCCTGCTCGTTAAGGTTGAGGTCTaGCATGAGGTTGCTTTGCGATATGGAGCCGACAGTCCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: LLDELLPLLLVKVEV*HEVALRYGADSPSD
Trigger: ATCACTGGGACTGTCGGCTCCATATCGCAAAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAGGAGTGGAAGGAGCTCATCGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACATCAGCCAGACGCTTTTaGTTGAGAGAGTCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATSARRF*LRESSP
Trigger: GGGGCTAGACTCTCTCAACAAAAAGCGTCTGGCTGA...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCGCTGAGGTCACCCTCTTCCCCTTCAGATTGGGGAACTCCCTCAGAGGGTGAAGCATATTTCCTGGCTTaGGCTTCATCAGAAACAGGG +
Preference number: 5 (lower is better)
Translates to: PLRSPSSPSDWGTPSEGEAYFLA*ASSETG
Trigger: CCCTGTTTCTGATGAAGCCAAAGCCAGGAAATATGC...TTCACCCTCTGAGGGAGTTCCCCAATCTGAAGGGGAAGAGGGTGACCTCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCCTGTTGGCCTGAGTTaGTGGGGAGAGAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFPVGLS*WGERKL
Trigger: CAGTTTCCTCTCTCCCCACAAACTCAGGCCAACAGG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCTTCAGGGTCCCCTTATaGTGCTGCTGGGAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRFRVPL*CCWERP
Trigger: TGGCCTCTCCCAGCAGCACAATAAGGGGACCCTGAA...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTGCCTCCTGTCCCTTTTaGGCATACGCAGTCAACAGC +
Preference number: 5 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFASCPF*AYAVNS
Trigger: GCTGTTGACTGCGTATGCCAAAAAGGGACAGGAGGC...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp TTCCACTCCTGCTCGTTAAGGTTGAGGTCTGGCATGAGGTTGCTTTaGGATATGGAGCCGACAGTCCCAGTGATCATGCAAGGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: FHSCSLRLRSGMRLL*DMEPTVPVIMQGRS
Trigger: AGACCTGCCTTGCATGATCACTGGGACTGTCGGCTCCATATCGCAAAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAGGAGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTTGGCATGAGGTTGCTTaGCGATATGGAGCCGACAGT +
Preference number: 5 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFWHEVA*RYGADS
Trigger: ACTGTCGGCTCCATATCGCAAAGCAACCTCATGCCA...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTATGCCGGCATCAGGTTaGGACTGGGATTGTCCGCCC +
Preference number: 5 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFMPASG*DWDCPP
Trigger: GGGCGGACAATCCCAGTCCAAACCTGATGCCGGCAT...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATGTGAAGGGACTCACGTaGCTGTTCCCTGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYVKGLT*LFPGVW
Trigger: CCAGACCCCAGGGAACAGCAACGTGAGTCCCTTCAC...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTGCTGGTGCAAAATAACTACCAATGTGTGTACAACCTCTCGTCCCCTCACCGCTCCTGCTCGTTAAGGTaGAGGTCTGGCATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LLVQNNYQCVYNLSSPHRSCSLR*RSGMRL
Trigger: CAACCTCATGCCAGACCTCAACCTTAACGAGCAGGA...GCGGTGAGGGGACGAGAGGTTGTACACACATTGGTAGTTATTTTGCACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATGCTCGCGCTTCTGCTaGGCAGCGATCTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKCSRFC*AAICWS
Trigger: GCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTAATGAGAAAGGGGTTTaGTATTGCCGTAGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSNEKGV*YCRSPA
Trigger: TGCTGGACTACGGCAATACAAAACCCCTTTCTCATT...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTCGAGGACAGCTGGAGTaGGATGGACCCAAGGTGTTC +
Preference number: 5 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFRGQLE*DGPKVF
Trigger: GAACACCTTGGGTCCATCCAACTCCAGCTGTCCTCG...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAGACCCTAGCTGTGTCACCAGACCTGCTATCCCATGCCTCCTGTCCCTTTTTCCTGTGCTTACCACTTaGCTTTCGTTACGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: EDPSCVTRPAIPCLLSLFPVLTT*LSLRGS
Trigger: ACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAGG...AAAAAGGGACAGGAGGCATGGGATAGCAGGTCTGGTGACACAGCTAGGGTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp TGCCCTGCAGACCCGGCCCTCACTTGTGGAGAGCCTAACTGTTCTTaGTCAAAGGCTGCTGGAGAGAATTCCGTCTTAATATTAATGTCC +
Preference number: 5 (lower is better)
Translates to: CPADPALTCGEPNCS*SKAAGENSVLILMS
Trigger: GGACATTAATATTAAGACGGAATTCTCTCCAGCAGCCTTTGAGCAAGAACAGTTAGGCTCTCCACAAGTGAGGGCCGGGTCTGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATTTGGGACCGGTGGCTTaGTTAAACCAGGGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYLGPVA*LNQGSG
Trigger: CCCTGAACCCTGGTTTAACAAAGCCACCGGTCCCAA...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAGTAAGTGGAGCAGTCTaGGATAAAATCACCATGATG +
Preference number: 5 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGVSGAV*DKITMM
Trigger: CATCATGGTGATTTTATCCAAGACTGCTCCACTTAC...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CCCACATCTCTACCTTCCATATGTAGCCTGGGGTCCTGCTGCCAGGACATGGGAATAATTGTTTTCCATTaGGGCTGCAGAGAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PTSLPSICSLGSCCQDMGIIVFH*GCREEG
Trigger: TCCTTCCTCTCTGCAGCCCAAATGGAAAACAATTAT...TCCCATGTCCTGGCAGCAGGACCCCAGGCTACATATGGAAGGTAGAGATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTGTGCTTACCACTTTGCTTTCGTTACGGGGAAGTGCTCTCTCCATCTTCGTTTGCCTTCAGCCGATTTTaGGGAGAAAAGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LCLPLCFRYGEVLSPSSFAFSRF*GEKPLR
Trigger: CCTCAGCGGCTTTTCTCCCAAAAATCGGCTGAAGGC...AAACGAAGATGGAGAGAGCACTTCCCCGTAACGAAAGCAAAGTGGTAAGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 90 bp CTCAAAGGCTGCTGGAGAGAATTCCGTCTTAATATTAATGTCCTGTaGCAAGGGGGTTTGTGTGGCAGAGCCAGAAGACTCTGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: LKGCWREFRLNINVL*QGGLCGRARRLWVL
Trigger: AAGGACCCAGAGTCTTCTGGCTCTGCCACACAAACCCCCTTGGCACAGGACATTAATATTAAGACGGAATTCTCTCCAGCAGCCTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATTGGCATGAGGTTGCTTaGCGATATGGAGCCGACAGT +
Preference number: 5 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYWHEVA*RYGADS
Trigger: ACTGTCGGCTCCATATCGCAAAGCAACCTCATGCCA...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGCATATTTCCTGGCTTaGGCTTCATCAGAAACAGGG +
Preference number: 5 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLAYFLA*ASSETG
Trigger: CCCTGTTTCTGATGAAGCCAAAGCCAGGAAATATGC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAACTGTGGGAAGCTGCCTaGTGTCGGGTCTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKLWEAA*CRVLVL
Trigger: CAGTACCAAGACCCGACACAAGGCAGCTTCCCACAG...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGATGTGGGCATGTCCATaGGTGGCCTGTGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LQIILLSKVSTETCPQHWMWACP*VACGGG
Trigger: GCCCCCGCCACAGGCCACCAATGGACATGCCCACAT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAATTCAGGGTCCCCTTATaGTGCTGCTGGGAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKFRVPL*CCWERP
Trigger: TGGCCTCTCCCAGCAGCACAATAAGGGGACCCTGAA...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GGAAAGACATCTGTGCACAACTGCACAGTGACCACGCTCCCACCATGGGCAACAATAATTGTTTTCCATTaGGGCTGCAGAGAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: GKTSVHNCTVTTLPPWATIIVFH*GCREEG
Trigger: TCCTTCCTCTCTGCAGCCCAAATGGAAAACAATTAT...TGTTGCCCATGGTGGGAGCGTGGTCACTGTGCAGTTGTGCACAGATGTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp CTCTACCTGCCCAGCTCCCCAGGCCATGGGCTTTTGGTCCAAAGTAGTTGCTCTGTTACTGTTGGTTTTTaGGTCGTTTGGATAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LYLPSSPGHGLLVQSSCSVTVGF*VVWIEN
Trigger: GTTTTCTATCCAAACGACCAAAAAACCAACAGTAAC...AGAGCAACTACTTTGGACCAAAAGCCCATGGCCTGGGGAGCTGGGCAGGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATGGCATCATGAGCAGTTaGGAGTTAGTGAAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYGIMSS*ELVKSC
Trigger: GCAAGACTTCACTAACTCCAAACTGCTCATGATGCC...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp GAAATAATTTTCCAGTGGCCTCCTTCTCCCCTGAAAGCTGACAAAGAGCAGAAAGGAGTTAGTGAAGTCTaGCTTGTAGCTGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: EIIFQWPPSPLKADKEQKGVSEV*LVAGRA
Trigger: AGCCCTTCCAGCTACAAGCAAGACTTCACTAACTCC...TTTCTGCTCTTTGTCAGCTTTCAGGGGAGAAGGAGGCCACTGGAAAATTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCTACCTTCCATATAATGAGAAAGGGGTTTaGTATTGCCGTAGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: WGDIILQDTGPPHLYLPYNEKGV*YCRSPA
Trigger: TGCTGGACTACGGCAATACAAAACCCCTTTCTCATT...ATATGGAAGGTAGAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGTGGCTGGTGACACCCTaGGGACCGGTGGCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: LQIILLSKVSTETCPQHWWLVTP*GPVALL
Trigger: TAACAAAGCCACCGGTCCCAAGGGTGTCACCAGCCA...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGAGGTCTGGCATGAGGTaGCTTTGCGATATGGAGCCG +
Preference number: 5 (lower is better)
Translates to: LQIILLSKVSTETCPQHWRSGMR*LCDMEP
Trigger: CGGCTCCATATCGCAAAGCAACCTCATGCCAGACCT...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGTTGGGACCGGTGGCTTaGTTAAACCAGGGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: LQIILLSKVSTETCPQHWLGPVA*LNQGSG
Trigger: CCCTGAACCCTGGTTTAACAAAGCCACCGGTCCCAA...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp AACTGCAGAAGGTGGGGAGACATAATACTCCAGGATACAGGACCCCCACATCTCGTTACTGTTGGTTTTTaGGTCGTTTGGATAGAAAAC +
Preference number: 5 (lower is better)
Translates to: NCRRWGDIILQDTGPPHLVTVGF*VVWIEN
Trigger: GTTTTCTATCCAAACGACCAAAAAACCAACAGTAAC...GAGATGTGGGGGTCCTGTATCCTGGAGTATTATGTCTCCCCACCTTCTGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS-3UTR CAA 90 bp TTGCAAATAATTCTGCTATCTAAAGTTTCAACAGAAACTTGTCCCCAGCACTGGCACTGCCTGGGAGAATaGCGGGCTAGACATTTTCAG +
Preference number: 5 (lower is better)
Translates to: LQIILLSKVSTETCPQHWHCLGE*RARHFQ
Trigger: CTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGTG...CCAGTGCTGGGGACAAGTTTCTGTTGAAACTTTAGATAGCAGAATTATTTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp TGTGCCGCGGCAGCGCGAACTCCGCCATGGGGCAGGTaGGCAGCACCATGGGCCGCGGGCTGCACGGGCCGG +
Preference number: 6 (lower is better)
Translates to: CAAAARTPPWGR*AAPWAAGCTGR
Trigger: CCGGCCCGTGCAGCCCGCGGCCCATGGTGCTGCCCACCTGCCCCATGGCGGAGTTCGCGCTGCCGCGGCACA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp GCCGGGGCCGTGGCGGCGGGCGGCTGCCTGTGCTTCCCGGCGCGCTaGGCCTTGGCCTGGATGCAGCGCTGGTGCAGGGCGAAGGTGTGT +
Preference number: 6 (lower is better)
Translates to: AGAVAAGGCLCFPAR*ALAWMQRWCRAKVC
Trigger: ACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGCAGCCGCCCGCCGCCACGGCCCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp GCTCGGGCGACACGGCCTCGTAGCGGGCCTCGCAGGTaGTGTGGTGGCGCCGGCACAGCTCGATGCGCCGGC +
Preference number: 6 (lower is better)
Translates to: ARATRPRSGPRR*CGGAGTARCAG
Trigger: GCCGGCGCATCGAGCTGTGCCGGCGCCACCACAGCACCTGCGAGGCCCGCTACGAGGCCGTGTCGCCCGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS TCA 72 bp GCCGGCACAGCTCGATGCGCCGGCGAAGGCGCTCCATaGCCGCGCTGTGCCGCGGCAGCGCGAACTCCGCCA +
Preference number: 6 (lower is better)
Translates to: AGTARCAGEGAP*PRCAAAARTPP
Trigger: TGGCGGAGTTCGCGCTGCCGCGGCACAGCGCGGTCATGGAGCGCCTTCGCCGGCGCATCGAGCTGTGCCGGC
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp TGGCGGCGGGCGGCTGCCTGTGCTTCCCGGCGCGCTTaGCCTTGGCCTGGATGCAGCGCTGGTGCAGGGCGA +
Preference number: 6 (lower is better)
Translates to: WRRAAACASRRA*PWPGCSAGAGR
Trigger: TCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGCAGCCGCCCGCCGCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp GCCGTGGCGGCGGGCGGCTGCCTGTGCTTCCCGGCGCGCTTGGCCTaGGCCTGGATGCAGCGCTGGTGCAGGGCGAAGGTGTGTTGGCGC +
Preference number: 6 (lower is better)
Translates to: AVAAGGCLCFPARLA*AWMQRWCRAKVCWR
Trigger: GCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGCAGCCGCCCGCCGCCACGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp TCGATGCGCCGGCGAAGGCGCTCCATGACCGCGCTGTaGCGCGGCAGCGCGAACTCCGCCATGGGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: SMRRRRRSMTAL*RGSANSAMGQV
Trigger: CACCTGCCCCATGGCGGAGTTCGCGCTGCCGCGGCACAGCGCGGTCATGGAGCGCCTTCGCCGGCGCATCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp GCGGGCGGCTGCCTGTGCTTCCCGGCGCGCTTGGCCTaGGCCTGGATGCAGCGCTGGTGCAGGGCGAAGGTG +
Preference number: 6 (lower is better)
Translates to: AGGCLCFPARLA*AWMQRWCRAKV
Trigger: CACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGCAGCCGCCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp GCCTGGATGCAGCGCTGGTGCAGGGCGAAGGTGTGTTaGCGCTCCAGCTCCAGGCGCTCGGGCGACACGGCC +
Preference number: 6 (lower is better)
Translates to: AWMQRWCRAKVC*RSSSRRSGDTA
Trigger: GGCCGTGTCGCCCGAGCGCCTGGAGCTGGAGCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp CGGGCGGCTGCCTGTGCTTCCCGGCGCGCTTGGCCTTaGCCTGGATGCAGCGCTGGTGCAGGGCGAAGGTGT +
Preference number: 6 (lower is better)
Translates to: RAAACASRRAWP*PGCSAGAGRRC
Trigger: ACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGCAGCCGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp GGCCTGGATGCAGCGCTGGTGCAGGGCGAAGGTGTGTaGGCGCTCCAGCTCCAGGCGCTCGGGCGACACGGC +
Preference number: 6 (lower is better)
Translates to: GLDAALVQGEGV*ALQLQALGRHG
Trigger: GCCGTGTCGCCCGAGCGCCTGGAGCTGGAGCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp CTTGGCCTTGGCCTGGATGCAGCGCTGGTGCAGGGCGAAGGTGTGTaGGCGCTCCAGCTCCAGGCGCTCGGGCGACACGGCCTCGTAGCG +
Preference number: 6 (lower is better)
Translates to: LGLGLDAALVQGEGV*ALQLQALGRHGLVA
Trigger: CGCTACGAGGCCGTGTCGCCCGAGCGCCTGGAGCTGGAGCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp GCCTGTGCTTCCCGGCGCGCTTGGCCTTGGCCTGGATaGAGCGCTGGTGCAGGGCGAAGGTGTGTTGGCGCT +
Preference number: 6 (lower is better)
Translates to: ACASRRAWPWPG*SAGAGRRCVGA
Trigger: AGCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAAGCACAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp TTCCCGGCGCGCTTGGCCTTGGCCTGGATGCAGCGCTaGTGCAGGGCGAAGGTGTGTTGGCGCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: FPARLALAWMQR*CRAKVCWRSSS
Trigger: GGAGCTGGAGCGCCAACACACCTTCGCCCTGCACCAGCGCTGCATCCAGGCCAAGGCCAAGCGCGCCGGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp CCCGGGGCTGGTGCCGGGGTGGCCTGCTGTGGGTTCTaGAGCATCTGCTCGCGCTTCTGCTTGGCAGCGATC +
Preference number: 6 (lower is better)
Translates to: PGAGAGVACCGF*SICSRFCLAAI
Trigger: GATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGCCACCCCGGCACCAGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp GGGACATCTAAGGAACTGTGGGAGGGCCCCGTCTGCTaGCATGTGGACATCTGGCCCGGGGCTGGTGCCGGG +
Preference number: 6 (lower is better)
Translates to: GTSKELWEGPVC*HVDIWPGAGAG
Trigger: CCCGGCACCAGCCCCGGGCCAGATGTCCACATGGCAGCAGACGGGGCCCTCCCACAGTTCCTTAGATGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp CTGTTGTGGGAGCTGGCCACGGACACGGCAGGCGGCTaGGTCCCAACACTGGTAGCCTGGGCTTGCACAGGG +
Preference number: 6 (lower is better)
Translates to: LLWELATDTAGG*VPTLVAWACTG
Trigger: CCCTGTGCAAGCCCAGGCTACCAGTGTTGGGACCCAGCCGCCTGCCGTGTCCGTGGCCAGCTCCCACAACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000638220.2
ENST00000640191.1
CDS CCA 72 bp TGCTCGCGCTTCTGCTTGGCAGCGATCTGCTGGAGCTaGTGGGCAGAGGACAGCTCTGAGGCCCCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: CSRFCLAAICWS*WAEDSSEAPPG
Trigger: CCCAGGAGGGGCCTCAGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp GTGCGTTCTGGGCCTGGGCTGATGCCGGCATCAGGTTaGGACTGGGATTGTCCGCCCGGGGCTGACCAGAGG +
Preference number: 6 (lower is better)
Translates to: VRSGPGLMPASG*DWDCPPGADQR
Trigger: CCTCTGGTCAGCCCCGGGCGGACAATCCCAGTCCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAACGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp CACGGACACGGCAGGCGGCTGGGTCCCAACACTGGTAGCCTGGGCTaGCACAGGGACACTGGAAGGGTTCTGCTCCTGGCCAGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: HGHGRRLGPNTGSLG*HRDTGRVLLLARWN
Trigger: GTTCCACCTGGCCAGGAGCAGAACCCTTCCAGTGTCCCTGTGCAAGCCCAGGCTACCAGTGTTGGGACCCAGCCGCCTGCCGTGTCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp GCAGGCGGCTGGGTCCCAACACTGGTAGCCTGGGCTTaGACAGGGACACTGGAAGGGTTCTGCTCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: AGGWVPTLVAWA*TGTLEGFCSWP
Trigger: TGGCCAGGAGCAGAACCCTTCCAGTGTCCCTGTGCAAGCCCAGGCTACCAGTGTTGGGACCCAGCCGCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp GAGGTGTTCTGGCCCACGTTGGTCTGCCGTGGAATGTaGGCATGTCCATTGGTGGCCTGTGGCGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: EVFWPTLVCRGM*ACPLVACGGGW
Trigger: CCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGGGCCAGAACACCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 90 bp GGGGTGGCCTGCTGTGGGTTCTGGAGCATCTGCTCGCGCTTCTGCTaGGCAGCGATCTGCTGGAGCTGGTGGGCAGAGGACAGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: GVACCGFWSICSRFC*AAICWSWWAEDSSE
Trigger: CTCAGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp TGGAGCATCTGCTCGCGCTTCTGCTTGGCAGCGATCTaGTGGAGCTGGTGGGCAGAGGACAGCTCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: WSICSRFCLAAI*WSWWAEDSSEA
Trigger: GGCCTCAGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp GCCTGCTGTGGGTTCTGGAGCATCTGCTCGCGCTTCTaGTTGGCAGCGATCTGCTGGAGCTGGTGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: ACCGFWSICSRF*LAAICWSWWAE
Trigger: CTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp AGCATCTGCTCGCGCTTCTGCTTGGCAGCGATCTGCTaGAGCTGGTGGGCAGAGGACAGCTCTGAGGCCCCT +
Preference number: 6 (lower is better)
Translates to: SICSRFCLAAIC*SWWAEDSSEAP
Trigger: AGGGGCCTCAGAGCTGTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp CCACGTTGGTCTGCCGTGGAATGTGGGCATGTCCATTaGTGGCCTGTGGCGGGGGCTGGGCAACTATCTGGG +
Preference number: 6 (lower is better)
Translates to: PRWSAVECGHVH*WPVAGAGQLSG
Trigger: CCCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 72 bp GGTGTGTCCAGCCACACTAGAGAGCCCACTGCCACCTaGCTGCCCGCTATAGGCAAAAGGCAGCTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: GVSSHTREPTAT*LPAIGKRQLLA
Trigger: GGCCAGGAGCTGCCTTTTGCCTATAGCGGGCAGCCAGGTGGCAGTGGGCTCTCTAGTGTGGCTGGACACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp CCCACGTTGGTCTGCCGTGGAATGTGGGCATGTCCATaGGTGGCCTGTGGCGGGGGCTGGGCAACTATCTGG +
Preference number: 6 (lower is better)
Translates to: PTLVCRGMWACP*VACGGGWATIW
Trigger: CCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 90 bp GGGCTCTTTGTGCGTTCTGGGCCTGGGCTGATGCCGGCATCAGGTTaGGACTGGGATTGTCCGCCCGGGGCTGACCAGAGGTGTGGAATA +
Preference number: 6 (lower is better)
Translates to: GLFVRSGPGLMPASG*DWDCPPGADQRCGI
Trigger: TATTCCACACCTCTGGTCAGCCCCGGGCGGACAATCCCAGTCCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAACGCACAAAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp AGCAGAGGACCCTGTGAACTGTCCAACCTGCTGTGGGAAGCTGCCTaGTGTCGGGTCTTGGTACTGGGGTGGTGGGCGGGTCAGATGGCG +
Preference number: 6 (lower is better)
Translates to: SRGPCELSNLLWEAA*CRVLVLGWWAGQMA
Trigger: CGCCATCTGACCCGCCCACCACCCCAGTACCAAGACCCGACACAAGGCAGCTTCCCACAGCAGGTTGGACAGTTCACAGGGTCCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
ENST00000640191.1
CDS TCA 72 bp GCCAGAGCTTCCCAGAGAGTTCTGCCCATAGGCAGCTaGGACGGAGGTGTTCTGGCCCACGTTGGTCTGCCG +
Preference number: 6 (lower is better)
Translates to: ARASQRVLPIGS*DGGVLAHVGLP
Trigger: CGGCAGACCAACGTGGGCCAGAACACCTCCGTCTCAGCTGCCTATGGGCAGAACTCTCTGGGAAGCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS GCA 72 bp GGAGCCATGGGCCTGTTGGGCACTGCCTGGGAGAATTaGGGGCTAGACATTTTCAGGTGGGCCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GAMGLLGTAWEN*GLDIFRWACCC
Trigger: GCAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGTGCCCAACAGGCCCATGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp GCTGTGGGTTCTGGAGCATCTGCTCGCGCTTCTGCTTaGCAGCGATCTGCTGGAGCTGGTGGGCAGAGGACA +
Preference number: 6 (lower is better)
Translates to: AVGSGASARASA*QRSAGAGGQRT
Trigger: TGTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp TCCCAGCCTGAGGGAACACTCGAGGACAGCTGGAGTTaGATGGACCCAAGGTGTTCATGCCGGGCACGGCAG +
Preference number: 6 (lower is better)
Translates to: SQPEGTLEDSWS*MDPRCSCRARQ
Trigger: CTGCCGTGCCCGGCATGAACACCTTGGGTCCATCCAACTCCAGCTGTCCTCGAGTGTTCCCTCAGGCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 72 bp TGCTGTGGGTTCTGGAGCATCTGCTCGCGCTTCTGCTaGGCAGCGATCTGCTGGAGCTGGTGGGCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: CCGFWSICSRFC*AAICWSWWAED
Trigger: GTCCTCTGCCCACCAGCTCCAGCAGATCGCTGCCAAGCAGAAGCGCGAGCAGATGCTCCAGAACCCACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp GGGAGCCATGGGCCTGTTGGGCACTGCCTGGGAGAATaGCGGGCTAGACATTTTCAGGTGGGCCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GSHGPVGHCLGE*RARHFQVGLLL
Trigger: CAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATTCTCCCAGGCAGTGCCCAACAGGCCCATGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp GGGAGCCAGGGAACTGAGCCACACCCCGGTCCTGTTGGCCTGAGTTaGTGGGGAGAGAGGAAACTGAAGCATGTCCAGGGCCCATTGGCA +
Preference number: 6 (lower is better)
Translates to: GSQGTEPHPGPVGLS*WGERKLKHVQGPLA
Trigger: TGCCAATGGGCCCTGGACATGCTTCAGTTTCCTCTCTCCCCACAAACTCAGGCCAACAGGACCGGGGTGTGGCTCAGTTCCCTGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 90 bp GTGTTCTGGCCCACGTTGGTCTGCCGTGGAATGTGGGCATGTCCATaGGTGGCCTGTGGCGGGGGCTGGGCAACTATCTGGGTTATGCCA +
Preference number: 6 (lower is better)
Translates to: VFWPTLVCRGMWACP*VACGGGWATIWVMP
Trigger: TGGCATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGGGCCAGAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS TCA 72 bp GGCATCAGGTTTGGACTGGGATTGTCCGCCCGGGGCTaGCCAGAGGTGTGGAATAAGGTTTGGGAGCCCCCT +
Preference number: 6 (lower is better)
Translates to: GIRFGLGLSARG*PEVWNKVWEPP
Trigger: AGGGGGCTCCCAAACCTTATTCCACACCTCTGGTCAGCCCCGGGCGGACAATCCCAGTCCAAACCTGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS TCA 72 bp ACCTGCAAGGGCTCTTTGTGCGTTCTGGGCCTGGGCTaGTGCCGGCATCAGGTTTGGACTGGGATTGTCCGC +
Preference number: 6 (lower is better)
Translates to: TCKGSLCVLGLG*CRHQVWTGIVR
Trigger: GCGGACAATCCCAGTCCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAACGCACAAAGAGCCCTTGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp TGGCCTGTGGCGGGGGCTGGGCAACTATCTGGGTTATaGCAGAAGCCATGCCATAGAGGCTGCTCTGAGGCA +
Preference number: 6 (lower is better)
Translates to: WPVAGAGQLSGL*QKPCHRGCSEA
Trigger: TGCCTCAGAGCAGCCTCTATGGCATGGCTTCTGGCATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS GCA 72 bp GCAGCTGAGACGGAGGTGTTCTGGCCCACGTTGGTCTaGCGTGGAATGTGGGCATGTCCATTGGTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: AAETEVFWPTLV*RGMWACPLVAC
Trigger: ACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACGTGGGCCAGAACACCTCCGTCTCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS GCA 72 bp CAGGTGGGCCTGCTGCTGCATGTGGAAACTGGAGGCTaGAGTGAAGGGACTCACGTTGCTGTTCCCTGGGGT +
Preference number: 6 (lower is better)
Translates to: QVGLLLHVETGG*SEGTHVAVPWG
Trigger: ACCCCAGGGAACAGCAACGTGAGTCCCTTCACTGCAGCCTCCAGTTTCCACATGCAGCAGCAGGCCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 72 bp CTGCCGTGGAATGTGGGCATGTCCATTGGTGGCCTGTaGCGGGGGCTGGGCAACTATCTGGGTTATGCCAGA +
Preference number: 6 (lower is better)
Translates to: LPWNVGMSIGGL*RGLGNYLGYAR
Trigger: TCTGGCATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 72 bp CGTTGGTCTGCCGTGGAATGTGGGCATGTCCATTGGTaGCCTGTGGCGGGGGCTGGGCAACTATCTGGGTTA +
Preference number: 6 (lower is better)
Translates to: RWSAVECGHVHW*PVAGAGQLSGL
Trigger: TAACCCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACATTCCACGGCAGACCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 72 bp CAGGGCTGGCTTGCTCTGGCCAGACCCCGGGCTGCCTaGCCCACAGTCCGCTTTGTAATGAGAAAGGGGTTT +
Preference number: 6 (lower is better)
Translates to: QGWLALARPRAA*PTVRFVMRKGF
Trigger: AAACCCCTTTCTCATTACAAAGCGGACTGTGGGCAAGGCAGCCCGGGGTCTGGCCAGAGCAAGCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS TCA 72 bp TCTTGGTACTGGGGTGGTGGGCGGGTCAGATGGCGCTaGAACTGTTGCTTCTCCTGTTCCGCGAGAAGGTGC +
Preference number: 6 (lower is better)
Translates to: SWYWGGGRVRWR*NCCFSCSARRC
Trigger: GCACCTTCTCGCGGAACAGGAGAAGCAACAGTTTCAGCGCCATCTGACCCGCCCACCACCCCAGTACCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000638220.2
ENST00000640191.1
CDS CCA 72 bp ACCACACCTGCAAGGGCTCTTTGTGCGTTCTGGGCCTaGGCTGATGCCGGCATCAGGTTTGGACTGGGATTG +
Preference number: 6 (lower is better)
Translates to: TTPARALCAFWA*ADAGIRFGLGL
Trigger: CAATCCCAGTCCAAACCTGATGCCGGCATCAGCCCAGGCCCAGAACGCACAAAGAGCCCTTGCAGGTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp GAAGCTGCCTTGTGTCGGGTCTTGGTACTGGGGTGGTaGGCGGGTCAGATGGCGCTGAAACTGTTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: EAALCRVLVLGW*AGQMALKLLLL
Trigger: GAGAAGCAACAGTTTCAGCGCCATCTGACCCGCCCACCACCCCAGTACCAAGACCCGACACAAGGCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
ENST00000640191.1
CDS CCA 72 bp TGGGAAGCTGCCTTGTGTCGGGTCTTGGTACTGGGGTaGTGGGCGGGTCAGATGGCGCTGAAACTGTTGCTT +
Preference number: 6 (lower is better)
Translates to: WEAALCRVLVLG*WAGQMALKLLL
Trigger: AAGCAACAGTTTCAGCGCCATCTGACCCGCCCACCACCCCAGTACCAAGACCCGACACAAGGCAGCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
ENST00000640191.1
CDS CCA 72 bp ATGTGGGCATGTCCATTGGTGGCCTGTGGCGGGGGCTaGGCAACTATCTGGGTTATGCCAGAAGCCATGCCA +
Preference number: 6 (lower is better)
Translates to: MWACPLVACGGG*ATIWVMPEAMP
Trigger: TGGCATGGCTTCTGGCATAACCCAGATAGTTGCCCAGCCCCCGCCACAGGCCACCAATGGACATGCCCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 72 bp GGAACTGAGCCACACCCCGGTCCTGTTGGCCTGAGTTaGTGGGGAGAGAGGAAACTGAAGCATGTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: GTEPHPGPVGLS*WGERKLKHVQG
Trigger: GCCCTGGACATGCTTCAGTTTCCTCTCTCCCCACAAACTCAGGCCAACAGGACCGGGGTGTGGCTCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 90 bp CTTGGGACCGGTGGCTTTGTTAAACCAGGGTTCAGGGTCCCCTTATaGTGCTGCTGGGAGAGGCCAGAGCTTCCCAGAGAGTTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LGTGGFVKPGFRVPL*CCWERPELPREFCP
Trigger: TGGGCAGAACTCTCTGGGAAGCTCTGGCCTCTCCCAGCAGCACAATAAGGGGACCCTGAACCCTGGTTTAACAAAGCCACCGGTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 90 bp GATGCTGCCAGGAGGAATTCTGGCCTCCCATGGCTGGTGACACCCTaGGGACCGGTGGCTTTGTTAAACCAGGGTTCAGGGTCCCCTTAT +
Preference number: 6 (lower is better)
Translates to: DAARRNSGLPWLVTP*GPVALLNQGSGSPY
Trigger: ATAAGGGGACCCTGAACCCTGGTTTAACAAAGCCACCGGTCCCAAGGGTGTCACCAGCCATGGGAGGCCAGAATTCCTCCTGGCAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 72 bp TTCCCTGATGCTGCCAGGAGGAATTCTGGCCTCCCATaGCTGGTGACACCCTTGGGACCGGTGGCTTTGTTA +
Preference number: 6 (lower is better)
Translates to: FPDAARRNSGLP*LVTPLGPVALL
Trigger: TAACAAAGCCACCGGTCCCAAGGGTGTCACCAGCCATGGGAGGCCAGAATTCCTCCTGGCAGCATCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 90 bp CTGTTGGTCCAAAAGCAACTGATGCTGCTTCATTACAGCGGCCTGTaGCTGGCTGCTGAGATAGGGGGAGCTGTTGTGGGAGCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: LLVQKQLMLLHYSGL*LAAEIGGAVVGAGH
Trigger: GTGGCCAGCTCCCACAACAGCTCCCCCTATCTCAGCAGCCAGCAACAGGCCGCTGTAATGAAGCAGCATCAGTTGCTTTTGGACCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000638220.2
ENST00000640191.1
CDS CAA 90 bp AATTCTGGCCTCCCATGGCTGGTGACACCCTTGGGACCGGTGGCTTaGTTAAACCAGGGTTCAGGGTCCCCTTATTGTGCTGCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: NSGLPWLVTPLGPVA*LNQGSGSPYCAAGR
Trigger: TCTCCCAGCAGCACAATAAGGGGACCCTGAACCCTGGTTTAACAAAGCCACCGGTCCCAAGGGTGTCACCAGCCATGGGAGGCCAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 72 bp GTTAAACCAGGGTTCAGGGTCCCCTTATTGTGCTGCTaGGAGAGGCCAGAGCTTCCCAGAGAGTTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: VKPGFRVPLLCC*ERPELPREFCP
Trigger: TGGGCAGAACTCTCTGGGAAGCTCTGGCCTCTCCCAGCAGCACAATAAGGGGACCCTGAACCCTGGTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 72 bp CTCCCATGGCTGGTGACACCCTTGGGACCGGTGGCTTaGTTAAACCAGGGTTCAGGGTCCCCTTATTGTGCT +
Preference number: 6 (lower is better)
Translates to: LPWLVTPLGPVA*LNQGSGSPYCA
Trigger: AGCACAATAAGGGGACCCTGAACCCTGGTTTAACAAAGCCACCGGTCCCAAGGGTGTCACCAGCCATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CAA 90 bp CCGGGCTGCCTTGCCCACAGTCCGCTTTGTAATGAGAAAGGGGTTTaGTATTGCCGTAGTCCAGCACAGACCCCTGGTTATTCGCGGAGT +
Preference number: 6 (lower is better)
Translates to: PGCLAHSPLCNEKGV*YCRSPAQTPGYSRS
Trigger: ACTCCGCGAATAACCAGGGGTCTGTGCTGGACTACGGCAATACAAAACCCCTTTCTCATTACAAAGCGGACTGTGGGCAAGGCAGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp AATTGCGGGCTAGACATTTTCAGGTGGGCCTGCTGCTaGATGTGGAAACTGGAGGCTGCAGTGAAGGGACTC +
Preference number: 6 (lower is better)
Translates to: NCGLDIFRWACC*MWKLEAAVKGL
Trigger: GAGTCCCTTCACTGCAGCCTCCAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS GCA 72 bp GAGAATTGCGGGCTAGACATTTTCAGGTGGGCCTGCTaGTGCATGTGGAAACTGGAGGCTGCAGTGAAGGGA +
Preference number: 6 (lower is better)
Translates to: ENCGLDIFRWAC*CMWKLEAAVKG
Trigger: TCCCTTCACTGCAGCCTCCAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp TGGGAGAATTGCGGGCTAGACATTTTCAGGTGGGCCTaGTGCTGCATGTGGAAACTGGAGGCTGCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: WENCGLDIFRWA*CCMWKLEAAVK
Trigger: CTTCACTGCAGCCTCCAGTTTCCACATGCAGCAGCAGGCCCACCTGAAAATGTCTAGCCCGCAATTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp CTTCCACTCCTGCTCGTTAAGGTTGAGGTCTGGCATGAGGTTGCTTaGCGATATGGAGCCGACAGTCCCAGTGATCATGCAAGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: LPLLLVKVEVWHEVA*RYGADSPSDHARQV
Trigger: GACCTGCCTTGCATGATCACTGGGACTGTCGGCTCCATATCGCAAAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAGGAGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp CTGTTCAGCTCCTCGATGAGCTCCTTCCACTCCTGCTCGTTAAGGTaGAGGTCTGGCATGAGGTTGCTTTGCGATATGGAGCCGACAGTC +
Preference number: 6 (lower is better)
Translates to: LFSSSMSSFHSCSLR*RSGMRLLCDMEPTV
Trigger: GACTGTCGGCTCCATATCGCAAAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAGGAGTGGAAGGAGCTCATCGAGGAGCTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp GACCTGTTCAGCTCCTCGATGAGCTCCTTCCACTCCTaGTCGTTAAGGTTGAGGTCTGGCATGAGGTTGCTT +
Preference number: 6 (lower is better)
Translates to: DLFSSSMSSFHS*SLRLRSGMRLL
Trigger: AAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAGGAGTGGAAGGAGCTCATCGAGGAGCTGAACAGGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS GCA 72 bp CTATCTGGGTTATGCCAGAAGCCATGCCATAGAGGCTaGTCTGAGGCATGTTTTGGGAGCCAGGGAACTGAG +
Preference number: 6 (lower is better)
Translates to: LSGLCQKPCHRG*SEACFGSQGTE
Trigger: CTCAGTTCCCTGGCTCCCAAAACATGCCTCAGAGCAGCCTCTATGGCATGGCTTCTGGCATAACCCAGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000511027.1
ENST00000638220.2
ENST00000639666.1
CDS CCA 72 bp GAGCTCCTTCCACTCCTGCTCGTTAAGGTTGAGGTCTaGCATGAGGTTGCTTTGCGATATGGAGCCGACAGT +
Preference number: 6 (lower is better)
Translates to: ELLPLLLVKVEV*HEVALRYGADS
Trigger: ACTGTCGGCTCCATATCGCAAAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAGGAGTGGAAGGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CCA 72 bp CTGGTTATTCGCGGAGTTCTGATTCAAGTTACTCGGTaGCTGGTGACTCAGCAGGTTCACATGGCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: LVIRGVLIQVTR*LVTQQVHMAGL
Trigger: CAGCCCAGCCATGTGAACCTGCTGAGTCACCAGCCACCGAGTAACTTGAATCAGAACTCCGCGAATAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp CAAAAGCAACTGATGCTGCTTCATTACAGCGGCCTGTaGCTGGCTGCTGAGATAGGGGGAGCTGTTGTGGGA +
Preference number: 6 (lower is better)
Translates to: QKQLMLLHYSGL*LAAEIGGAVVG
Trigger: TCCCACAACAGCTCCCCCTATCTCAGCAGCCAGCAACAGGCCGCTGTAATGAAGCAGCATCAGTTGCTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000638220.2
ENST00000640191.1
CDS CAA 72 bp CTGCTCGTTAAGGTTGAGGTCTGGCATGAGGTTGCTTaGCGATATGGAGCCGACAGTCCCAGTGATCATGCA +
Preference number: 6 (lower is better)
Translates to: LLVKVEVWHEVA*RYGADSPSDHA
Trigger: TGCATGATCACTGGGACTGTCGGCTCCATATCGCAAAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp TCCTCGATGAGCTCCTTCCACTCCTGCTCGTTAAGGTaGAGGTCTGGCATGAGGTTGCTTTGCGATATGGAG +
Preference number: 6 (lower is better)
Translates to: SSMSSFHSCSLR*RSGMRLLCDME
Trigger: CTCCATATCGCAAAGCAACCTCATGCCAGACCTCAACCTTAACGAGCAGGAGTGGAAGGAGCTCATCGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp CCTGGCCAGGTGGAACCAGTGATCGGAAAGGCATATTTCCTGGCTTaGGCTTCATCAGAAACAGGGAGTTCTGCTCGTGACTTATATGGG +
Preference number: 6 (lower is better)
Translates to: PGQVEPVIGKAYFLA*ASSETGSSARDLYG
Trigger: CCCATATAAGTCACGAGCAGAACTCCCTGTTTCTGATGAAGCCAAAGCCAGGAAATATGCCTTTCCGATCACTGGTTCCACCTGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS TCA 72 bp TGCTTCTCCTGTTCCGCGAGAAGGTGCTGTTGCCTCTaGAGGAACTGCTGTTGCTGTAAATGCTTTTGCTGC +
Preference number: 6 (lower is better)
Translates to: CFSCSARRCCCL*RNCCCCKCFCC
Trigger: GCAGCAAAAGCATTTACAGCAACAGCAGTTCCTTCAGAGGCAACAGCACCTTCTCGCGGAACAGGAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292599.4
ENST00000507385.1
ENST00000638220.2
ENST00000640191.1
CDS GCA 72 bp GACCCGGCCCTCACTTGTGGAGAGCCTAACTGTTCTTaGTCAAAGGCTGCTGGAGAGAATTCCGTCTTAATA +
Preference number: 6 (lower is better)
Translates to: DPALTCGEPNCS*SKAAGENSVLI
Trigger: TATTAAGACGGAATTCTCTCCAGCAGCCTTTGAGCAAGAACAGTTAGGCTCTCCACAAGTGAGGGCCGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp CTTATTCACACTAGGCATCATGAGCAGTTTGGAGTTAGTGAAGTCTaGCTTGTAGCTGGAAGGGCTGGCAGGCTTCTCCATGGGGTAAGG +
Preference number: 6 (lower is better)
Translates to: LIHTRHHEQFGVSEV*LVAGRAGRLLHGVR
Trigger: CCTTACCCCATGGAGAAGCCTGCCAGCCCTTCCAGCTACAAGCAAGACTTCACTAACTCCAAACTGCTCATGATGCCTAGTGTGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp ACTAGGCATCATGAGCAGTTTGGAGTTAGTGAAGTCTaGCTTGTAGCTGGAAGGGCTGGCAGGCTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: TRHHEQFGVSEV*LVAGRAGRLLH
Trigger: ATGGAGAAGCCTGCCAGCCCTTCCAGCTACAAGCAAGACTTCACTAACTCCAAACTGCTCATGATGCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp CTTGCCCACAGTCCGCTTTGTAATGAGAAAGGGGTTTaGTATTGCCGTAGTCCAGCACAGACCCCTGGTTAT +
Preference number: 6 (lower is better)
Translates to: LAHSPLCNEKGV*YCRSPAQTPGY
Trigger: ATAACCAGGGGTCTGTGCTGGACTACGGCAATACAAAACCCCTTTCTCATTACAAAGCGGACTGTGGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 72 bp GTGGAACCAGTGATCGGAAAGGCATATTTCCTGGCTTaGGCTTCATCAGAAACAGGGAGTTCTGCTCGTGAC +
Preference number: 6 (lower is better)
Translates to: VEPVIGKAYFLA*ASSETGSSARD
Trigger: GTCACGAGCAGAACTCCCTGTTTCTGATGAAGCCAAAGCCAGGAAATATGCCTTTCCGATCACTGGTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2
CDS CAA 90 bp TGGAGAGAATTCCGTCTTAATATTAATGTCCTGTGCCAAGGGGGTTaGTGTGGCAGAGCCAGAAGACTCTGGGTCCTTCTTCTCCTCGAA +
Preference number: 6 (lower is better)
Translates to: WREFRLNINVLCQGG*CGRARRLWVLLLLE
Trigger: TTCGAGGAGAAGAAGGACCCAGAGTCTTCTGGCTCTGCCACACAAACCCCCTTGGCACAGGACATTAATATTAAGACGGAATTCTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292599.4
ENST00000638220.2