RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAMDC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000177943

Ensembl transcript IDs: ENST00000317446.7, ENST00000445819.5, ENST00000479475.1, ENST00000481327.1, ENST00000485732.5

Found 639 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCTCAGGAAAACCCATGTGGTACCAGAAGCGGAGGCAGGAGGCTaGGGTGGCCGGCAGAGGCTCGCTGCGCAGCCAGGCGGCCCGGCC +
Preference number: 1 (lower is better)
Translates to: VLRKTHVVPEAEAGG*GGRQRLAAQPGGPA
Trigger: GGCCGGGCCGCCTGGCTGCGCAGCGAGCCTCTGCCGGCCACCCCAGCCTCCTGCCTCCGCTTCTGGTACCACATGGGTTTTCCTGAGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 90 bp TGGAACTCCTTGGCACTGGCTACCTCCACCTGGGCCTCCAGCCACTaGTGCCGCCGATGCCCGCCTGCGCCCCACACAGCCAGCTGGCCC +
Preference number: 1 (lower is better)
Translates to: WNSLALATSTWASSH*CRRCPPAPHTASWP
Trigger: GGGCCAGCTGGCTGTGTGGGGCGCAGGCGGGCATCGGCGGCACCAGTGGCTGGAGGCCCAGGTGGAGGTAGCCAGTGCCAAGGAGTTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 90 bp CCACACACTGGTAAGCCTGGCAAACCCCGAGCCAGGCTGGCCCCTTaGGCCCTCCTCCGTGCCTCCACTGCAGCCCAGGGCTCACCCGGG +
Preference number: 1 (lower is better)
Translates to: PHTGKPGKPRARLAP*ALLRASTAAQGSPG
Trigger: CCCGGGTGAGCCCTGGGCTGCAGTGGAGGCACGGAGGAGGGCCCAAGGGGCCAGCCTGGCTCGGGGTTTGCCAGGCTTACCAGTGTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTaGAGCCTGTCCCAGCCTGGGCGGGGCAGGTGTCCGGTCCCTGGC +
Preference number: 1 (lower is better)
Translates to: QHRAGNAQASAYPET*SLSQPGRGRCPVPG
Trigger: GCCAGGGACCGGACACCTGCCCCGCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR GCA 90 bp TACCTCCACCTGGGCCTCCAGCCACTGGTGCCGCCGATGCCCGCCTaGGCCCCACACAGCCAGCTGGCCCTGAGCACTGTGCAGCAGTAC +
Preference number: 1 (lower is better)
Translates to: YLHLGLQPLVPPMPA*APHSQLALSTVQQY
Trigger: GTACTGCTGCACAGTGCTCAGGGCCAGCTGGCTGTGTGGGGCGCAGGCGGGCATCGGCGGCACCAGTGGCTGGAGGCCCAGGTGGAGGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 90 bp ACTGCAGCCCAGGGCTCACCCGGGCTGGGGGCAGGCTGCTGGCAATaGTGCCCAGCCAGATACTCCACGTCATCCAGGGCAATGGGCCCC +
Preference number: 1 (lower is better)
Translates to: TAAQGSPGLGAGCWQ*CPARYSTSSRAMGP
Trigger: GGGGCCCATTGCCCTGGATGACGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGCCTGCCCCCAGCCCGGGTGAGCCCTGGGCTGCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR TCA 90 bp TGTCCCAGCCTGGGCGGGGCAGGTGTCCGGTCCCTGGCTAGGGTCTaGCCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGG +
Preference number: 1 (lower is better)
Translates to: CPSLGGAGVRSLARV*PSAGCHVRKRGLVW
Trigger: CCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACCCTAGCCAGGGACCGGACACCTGCCCCGCCCAGGCTGGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR GCA 90 bp CTGGAGGAGCAGATCATCCAGAGCCACGTAGGAGTGTGCCACGCCTaGGGCCACTGCCTCAAACACCACCTGGCGGGTGCAGGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: LEEQIIQSHVGVCHA*GHCLKHHLAGAGQG
Trigger: GCCCTGCCCTGCACCCGCCAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTGGATGATCTGCTCCTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 90 bp GGGCCCGTCCTGGAGGAGCAGATCATCCAGAGCCACGTAGGAGTGTaGCACGCCTGCGGCCACTGCCTCAAACACCACCTGGCGGGTGCA +
Preference number: 1 (lower is better)
Translates to: GPVLEEQIIQSHVGV*HACGHCLKHHLAGA
Trigger: TGCACCCGCCAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTGGATGATCTGCTCCTCCAGGACGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 90 bp CCAGCCACACAGGCCAGACTCAAAATCACAGGAACCTGCAGGACATaGGTGGGTGAGTGGTGCTGCCCCACGGCCCAAGCCCTGGGCACC +
Preference number: 1 (lower is better)
Translates to: PATQARLKITGTCRT*VGEWCCPTAQALGT
Trigger: GGTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGAGTCTGGCCTGTGTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 90 bp GCTGGCAATGCTGCCCAGCCAGATACTCCACGTCATCCAGGGCAATaGGCCCCAGGGCTGGCTGGCCGCCCAGAGTGGCTTCAAACACGA +
Preference number: 1 (lower is better)
Translates to: AGNAAQPDTPRHPGQ*APGLAGRPEWLQTR
Trigger: TCGTGTTTGAAGCCACTCTGGGCGGCCAGCCAGCCCTGGGGCCCATTGCCCTGGATGACGTGGAGTATCTGGCTGGGCAGCATTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR TCA 90 bp TTGGTGGGGCTCATGGCCCCAGGCGAGATTCTTTCCCTCACCAAGTaGGAGCAGTCAGTGGCTGCCCTGACCCGGCTGGCGGTTCCTCCA +
Preference number: 1 (lower is better)
Translates to: LVGLMAPGEILSLTK*EQSVAALTRLAVPP
Trigger: TGGAGGAACCGCCAGCCGGGTCAGGGCAGCCACTGACTGCTCTCACTTGGTGAGGGAAAGAATCTCGCCTGGGGCCATGAGCCCCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 90 bp CCCCCGTTGCCCAGGCACCCATTGGCCCAGCCGGACTCACAGAAGTaGTCAGGAAAACCCATGTGGTACCAGAAGCGGAGGCAGGAGGCT +
Preference number: 1 (lower is better)
Translates to: PPLPRHPLAQPDSQK*SGKPMWYQKRRQEA
Trigger: AGCCTCCTGCCTCCGCTTCTGGTACCACATGGGTTTTCCTGAGCACTTCTGTGAGTCCGGCTGGGCCAATGGGTGCCTGGGCAACGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 90 bp TGGCAGCTCTCTTGTCCTGTCTGGGTGCAGCATGCTCGCAGCTCCTaGGACCACACACTGGTAAGCCTGGCAAACCCCGAGCCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: WQLSCPVWVQHARSS*DHTLVSLANPEPGW
Trigger: CCAGCCTGGCTCGGGGTTTGCCAGGCTTACCAGTGTGTGGTCCCAGGAGCTGCGAGCATGCTGCACCCAGACAGGACAAGAGAGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR TCA 90 bp ACAGGCCAGACTCAAAATCACAGGAACCTGCAGGACATGGGTGGGTaGGTGGTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTAC +
Preference number: 1 (lower is better)
Translates to: TGQTQNHRNLQDMGG*VVLPHGPSPGHHDY
Trigger: GTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGAGTCTGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR TCA 90 bp GCGAGATTCTTTCCCTCACCAAGTGAGAGCAGTCAGTGGCTGCCCTaGCCCGGCTGGCGGTTCCTCCAGGATGGACCTTGCCCTGGGTGT +
Preference number: 1 (lower is better)
Translates to: ARFFPSPSESSQWLP*PGWRFLQDGPCPGC
Trigger: ACACCCAGGGCAAGGTCCATCCTGGAGGAACCGCCAGCCGGGTCAGGGCAGCCACTGACTGCTCTCACTTGGTGAGGGAAAGAATCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR TCA 90 bp GTGTCCGGTCCCTGGCTAGGGTCTGACCAAGTGCTGGATGTCACGTaGGGAAGCGGGGCCTTGTCTGGGGTGGTCTACGGATCACTGGTG +
Preference number: 1 (lower is better)
Translates to: VSGPWLGSDQVLDVT*GSGALSGVVYGSLV
Trigger: CACCAGTGATCCGTAGACCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACCCTAGCCAGGGACCGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 90 bp CTCAAAATCACAGGAACCTGCAGGACATGGGTGGGTGAGTGGTGCTaGCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAG +
Preference number: 1 (lower is better)
Translates to: LKITGTCRTWVGEWC*PTAQALGTTTTKGK
Trigger: CTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 90 bp GCCTGGCAGACAGGCAGCTGCTGTCTGCAGACTTGGTGGGGCTCATaGCCCCAGGCGAGATTCTTTCCCTCACCAAGTGAGAGCAGTCAG +
Preference number: 1 (lower is better)
Translates to: AWQTGSCCLQTWWGS*PQARFFPSPSESSQ
Trigger: CTGACTGCTCTCACTTGGTGAGGGAAAGAATCTCGCCTGGGGCCATGAGCCCCACCAAGTCTGCAGACAGCAGCTGCCTGTCTGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 90 bp AAGGATGGGGCCTGGCAGACAGGCAGCTGCTGTCTGCAGACTTGGTaGGGCTCATGGCCCCAGGCGAGATTCTTTCCCTCACCAAGTGAG +
Preference number: 1 (lower is better)
Translates to: KDGAWQTGSCCLQTW*GSWPQARFFPSPSE
Trigger: CTCACTTGGTGAGGGAAAGAATCTCGCCTGGGGCCATGAGCCCCACCAAGTCTGCAGACAGCAGCTGCCTGTCTGCCAGGCCCCATCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 90 bp TTCAAAGGCAGAGGGTATTGGTTCTGCTACCACAAGGATGGGGCCTaGCAGACAGGCAGCTGCTGTCTGCAGACTTGGTGGGGCTCATGG +
Preference number: 1 (lower is better)
Translates to: FKGRGYWFCYHKDGA*QTGSCCLQTWWGSW
Trigger: CCATGAGCCCCACCAAGTCTGCAGACAGCAGCTGCCTGTCTGCCAGGCCCCATCCTTGTGGTAGCAGAACCAATACCCTCTGCCTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 90 bp CCCCTATTTCAAAGGCAGAGGGTATTGGTTCTGCTACCACAAGGATaGGGCCTGGCAGACAGGCAGCTGCTGTCTGCAGACTTGGTGGGG +
Preference number: 1 (lower is better)
Translates to: PLFQRQRVLVLLPQG*GLADRQLLSADLVG
Trigger: CCCCACCAAGTCTGCAGACAGCAGCTGCCTGTCTGCCAGGCCCCATCCTTGTGGTAGCAGAACCAATACCCTCTGCCTTTGAAATAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR CCA 90 bp GCCCCCGTTGCCCAGGCACCCATTGGCCCAGCCGGACTCACAGAAGTGCTCAGGGGCAGGAGGCTGGGGTaGCCGGCAGAGGCTCGCTGC +
Preference number: 2 (lower is better)
Translates to: APVAQAPIGPAGLTEVLRGRRLG*PAEARC
Trigger: GCAGCGAGCCTCTGCCGGCCACCCCAGCCTCCTGCC...CCTGAGCACTTCTGTGAGTCCGGCTGGGCCAATGGGTGCCTGGGCAACGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR TCA 90 bp CCACAGCTGGCACAGACCCGGGTGCGGCTGTGTTCCCTGTGGGCCATAGGGACAAGTCAGTGGCTGCCCTaGCCCGGCTGGCGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: PQLAQTRVRLCSLWAIGTSQWLP*PGWRFL
Trigger: GAGGAACCGCCAGCCGGGTCAGGGCAGCCACTGACT...TGTCCCTATGGCCCACAGGGAACACAGCCGCACCCGGGTCTGTGCCAGCTGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR CCA 90 bp GCTCGCAGCTCCTGGGACCACACACTGGTAAGCCTGGCAAACCCCGAGCCAGGCTCTGTGCCCAGGGTGTaGTCCACAGGGGGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: ARSSWDHTLVSLANPEPGSVPRV*STGGWG
Trigger: CCCCCAGCCCCCTGTGGACCACACCCTGGGCACAGA...GCCTGGCTCGGGGTTTGCCAGGCTTACCAGTGTGTGGTCCCAGGAGCTGCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGCCAGGCTGGCCCCTTaGGCCCTCCTCCGTGCCTCC +
Preference number: 2 (lower is better)
Translates to: SQHRAGNAQASAYPETCSARLAP*ALLRAS
Trigger: GGAGGCACGGAGGAGGGCCCAAGGGGCCAGCCTGGC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR GCA 90 bp GCTCGCAGCTCCTGGGACCACACACTGGTAAGCCTGGCAAACCCCGAGCCAGGCCACGCCTGCGGCCACTaGCTCAAACACCACCTGGCG +
Preference number: 2 (lower is better)
Translates to: ARSSWDHTLVSLANPEPGHACGH*LKHHLA
Trigger: CGCCAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTG...GCCTGGCTCGGGGTTTGCCAGGCTTACCAGTGTGTGGTCCCAGGAGCTGCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR GCA 90 bp GCTGCTGGCAATGCTGCCCAGCCAGATACTCCACGTCATCCAGGGCAATGGGCCCTCCTGGACCCCTGCTaGCCCCGTTGCCCAGGCACC +
Preference number: 2 (lower is better)
Translates to: AAGNAAQPDTPRHPGQWALLDPC*PRCPGT
Trigger: GGTGCCTGGGCAACGGGGGCAGCAGGGGTCCAGGAG...GGCCCATTGCCCTGGATGACGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR GCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGGAGTGTGCCACGCCTaGGGCCACTGCCTCAAACAC +
Preference number: 2 (lower is better)
Translates to: SQHRAGNAQASAYPETCSGVCHA*GHCLKH
Trigger: GTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR GCA 90 bp GGCGGCCCGGCCCCCGGGGCCCAGCACGCCAGTTTCAAAGAAGGCAAAGTGGCCAAAATCACAGGAACCTaGAGGACATGGGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: GGPAPGAQHASFKEGKVAKITGT*RTWVGE
Trigger: CTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTT...GGCCACTTTGCCTTCTTTGAAACTGGCGTGCTGGGCCCCGGGGGCCGGGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR GCA 90 bp TGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGTCTACGGATCACCAGCTCCCCTTCTTCTaGAGCCAGCGCCGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: CWMSREEAGPCLGWSTDHQLPFF*SQRRPP
Trigger: TGGGGGACGGCGCTGGCTGCAGAAGAAGGGGAGCTG...GTGATCCGTAGACCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR CCA 90 bp CCCAGGCGAGATTCTTTCCCTCACCAAGTGAGAGCAGTCAGTGGCTGCCCTGACAGGGCTCACCCGGGCTaGGGGCAGGCTGCTGGCAAT +
Preference number: 2 (lower is better)
Translates to: PRRDSFPHQVRAVSGCPDRAHPG*GQAAGN
Trigger: ATTGCCAGCAGCCTGCCCCCAGCCCGGGTGAGCCCT...GTCAGGGCAGCCACTGACTGCTCTCACTTGGTGAGGGAAAGAATCTCGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR GCA 90 bp GCTGCTGGCAATGCTGCCCAGCCAGATACTCCACGTCATCCAGGGCAATGGGCCGCATATCCTGAGACCTaGAGCCTGTCCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: AAGNAAQPDTPRHPGQWAAYPET*SLSQPG
Trigger: CCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGC...GGCCCATTGCCCTGGATGACGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR GCA 90 bp CCCAGGCGAGATTCTTTCCCTCACCAAGTGAGAGCAGTCAGTGGCTGCCCTGACAGCCACGTAGGAGTGTaGCACGCCTGCGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: PRRDSFPHQVRAVSGCPDSHVGV*HACGHC
Trigger: GCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCT...GTCAGGGCAGCCACTGACTGCTCTCACTTGGTGAGGGAAAGAATCTCGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR GCA 90 bp CCCGCCTGCGCCCCACACAGCCAGCTGGCCCTGAGCACTGTGCAGCAGTACCTTCCGGACTCACAGAAGTaGTCAGGAAAACCCATGTGG +
Preference number: 2 (lower is better)
Translates to: PACAPHSQLALSTVQQYLPDSQK*SGKPMW
Trigger: CCACATGGGTTTTCCTGAGCACTTCTGTGAGTCCGG...AAGGTACTGCTGCACAGTGCTCAGGGCCAGCTGGCTGTGTGGGGCGCAGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR TCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGGTGCTGGATGTCACGTaGGGAAGCGGGGCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILVLDVT*GSGALS
Trigger: AGACAAGGCCCCGCTTCCTCACGTGACATCCAGCAC...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR TCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCTCCCTGGCTAGGGTCTaGCCAAGTGCTGGATGTCAC +
Preference number: 2 (lower is better)
Translates to: SQHRAGNAQASAYPETCSSLARV*PSAGCH
Trigger: GTGACATCCAGCACTTGGTCAGACCCTAGCCAGGGA...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR CCA 90 bp AGACTCAAAATCACAGGAACCTGCAGGACATGGGTGGGTGAGTGGTGCTGCCCCGCCTCAAACACCACCTaGCGGGTGCAGGGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RLKITGTCRTWVGEWCCPASNTT*RVQGRA
Trigger: TGCCCTGCCCTGCACCCGCCAGGTGGTGTTTGAGGC...GGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR CCA 90 bp TGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGTCTACGGATCACGCCTCTGTGTTGCTCTaGAAGGGGCAGCTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: CWMSREEAGPCLGWSTDHASVLL*KGQLPF
Trigger: GAAGGGGAGCTGCCCCTTCCAGAGCAACACAGAGGC...GTGATCCGTAGACCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR CCA 90 bp GGGACATGTGAGCCCTCCAAAGCAGCCCCCACATCTGGGGCTAAGGAGGAAGCCGGTCTGACCAAGTGCTaGATGTCACGTGAGGAAGCG +
Preference number: 2 (lower is better)
Translates to: GTCEPSKAAPTSGAKEEAGLTKC*MSREEA
Trigger: CGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC...GGCTTCCTCCTTAGCCCCAGATGTGGGGGCTGCTTTGGAGGGCTCACATGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR CCA 90 bp GCTGCTGGCAATGCTGCCCAGCCAGATACTCCACGTCATCCAGGGCAATGGGCCTCAAAGAAGGCAAAGTaGCCTGCCTCTGTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: AAGNAAQPDTPRHPGQWASKKAK*PASVPR
Trigger: CCTGGGCACAGAGGCAGGCCACTTTGCCTTCTTTGA...GGCCCATTGCCCTGGATGACGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR TCA 90 bp TCAAAATCACAGGAACCTGCAGGACATGGGTGGGTGAGTGGTGCTGCCCCACGGTCCCTGGCTAGGGTCTaGCCAAGTGCTGGATGTCAC +
Preference number: 2 (lower is better)
Translates to: SKSQEPAGHGWVSGAAPRSLARV*PSAGCH
Trigger: GTGACATCCAGCACTTGGTCAGACCCTAGCCAGGGA...CCGTGGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCAGGTGTCCGGTCCCTaGCTAGGGTCTGACCAAGTG +
Preference number: 2 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRQVSGP*LGSDQV
Trigger: CACTTGGTCAGACCCTAGCCAGGGACCGGACACCTG...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR TCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGGTGCTGGATGTCACGTaGGGAAGCGGGGCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTVLDVT*GSGALS
Trigger: AGACAAGGCCCCGCTTCCTCACGTGACATCCAGCAC...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR TCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGTCCCTGGCTAGGGTCTaGCCAAGTGCTGGATGTCAC +
Preference number: 2 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRSLARV*PSAGCH
Trigger: GTGACATCCAGCACTTGGTCAGACCCTAGCCAGGGA...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR TCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGGCCTCAGCATATCCTaGGACCTGCAGCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNGLSIS*DLQPVP
Trigger: TGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCC...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR CCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCGGTCTGACCAAGTGCTaGATGTCACGTGAGGAAGCG +
Preference number: 2 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAGLTKC*MSREEA
Trigger: CGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR CCA 90 bp CCCAGGCGAGATTCTTTCCCTCACCAAGTGAGAGCAGTCAGTGGCTGCCCTGACCGATCTGGAACTCCTTaGCACTGGCTACCTCCACCT +
Preference number: 2 (lower is better)
Translates to: PRRDSFPHQVRAVSGCPDRSGTP*HWLPPP
Trigger: AGGTGGAGGTAGCCAGTGCCAAGGAGTTCCAGATCG...GTCAGGGCAGCCACTGACTGCTCTCACTTGGTGAGGGAAAGAATCTCGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR CCA 90 bp GCCTCTGCTGGCTCCTGGGGTTCACCCCTATTTCAAAGGCAGAGGGTATTGGTTCTGCTACCACAAGGATaGGGCCTGGCAGACAGGCAG +
Preference number: 2 (lower is better)
Translates to: ASAGSWGSPLFQRQRVLVLLPQG*GLADRQ
Trigger: CTGCCTGTCTGCCAGGCCCCATCCTTGTGGTAGCAG...AACCAATACCCTCTGCCTTTGAAATAGGGGTGAACCCCAGGAGCCAGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR-3UTR TCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAGGCCTCAGCATATCCTaGGACCTGCAGCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: SWARVFIHRATESAQGREGLSIS*DLQPVP
Trigger: TGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCC...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR CCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCGGTCTGACCAAGTGCTaGATGTCACGTGAGGAAGCG +
Preference number: 2 (lower is better)
Translates to: FIHRATESAQGRERPGLSGLTKC*MSREEA
Trigger: CGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR CCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACAGGTGTCCGGTCCCTaGCTAGGGTCTGACCAAGTG +
Preference number: 2 (lower is better)
Translates to: SWARVFIHRATESAQGREQVSGP*LGSDQV
Trigger: CACTTGGTCAGACCCTAGCCAGGGACCGGACACCTG...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
3UTR-3UTR CCA 90 bp TGCTGGCTCCTGGGGTTCACCCCTATTTCAAAGGCAGAGGGTATTGGTTCTGCTCATGCTCGCAGCTCCTaGGACCACACACTGGTAAGC +
Preference number: 2 (lower is better)
Translates to: CWLLGFTPISKAEGIGSAHARSS*DHTLVS
Trigger: GCTTACCAGTGTGTGGTCCCAGGAGCTGCGAGCATG...AGCAGAACCAATACCCTCTGCCTTTGAAATAGGGGTGAACCCCAGGAGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 72 bp CAGAGCCACGTAGGAGTGTGCCACGCCTGCGGCCACTaGCTCAAACACCACCTGGCGGGTGCAGGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: QSHVGVCHACGH*LKHHLAGAGQG
Trigger: GCCCTGCCCTGCACCCGCCAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 72 bp GTGGCTGCCCTGACCCGGCTGGCGGTTCCTCCAGGATaGACCTTGCCCTGGGTGTGGGCACAGGGAGCACAG +
Preference number: 3 (lower is better)
Translates to: VAALTRLAVPPG*TLPWVWAQGAQ
Trigger: CTGTGCTCCCTGTGCCCACACCCAGGGCAAGGTCCATCCTGGAGGAACCGCCAGCCGGGTCAGGGCAGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 72 bp CAGGGCTCACCCGGGCTGGGGGCAGGCTGCTGGCAATaGTGCCCAGCCAGATACTCCACGTCATCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: QGSPGLGAGCWQ*CPARYSTSSRA
Trigger: TGCCCTGGATGACGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGCCTGCCCCCAGCCCGGGTGAGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 72 bp GGGTGGGTGAGTGGTGCTGCCCCACGGCCCAAGCCCTaGGCACCACGACTACGAAGGGAAAGGGCTAGGCAG +
Preference number: 3 (lower is better)
Translates to: GWVSGAAPRPKP*APRLRRERARQ
Trigger: CTGCCTAGCCCTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTCACCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 72 bp CACACACTGGTAAGCCTGGCAAACCCCGAGCCAGGCTaGCCCCTTGGGCCCTCCTCCGTGCCTCCACTGCAG +
Preference number: 3 (lower is better)
Translates to: HTLVSLANPEPG*PLGPSSVPPLQ
Trigger: CTGCAGTGGAGGCACGGAGGAGGGCCCAAGGGGCCAGCCTGGCTCGGGGTTTGCCAGGCTTACCAGTGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 72 bp ACAGGAACCTGCAGGACATGGGTGGGTGAGTGGTGCTaGCCCACGGCCCAAGCCCTGGGCACCACGACTACG +
Preference number: 3 (lower is better)
Translates to: TGTCRTWVGEWC*PTAQALGTTTT
Trigger: CGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 72 bp CAGCTGGCACAGACCCGGGTGCGGCTGTGTTCCCTGTaGGCCATAGGGACATGTGAGCCCTCCAAAGCAGCC +
Preference number: 3 (lower is better)
Translates to: QLAQTRVRLCSL*AIGTCEPSKAA
Trigger: GGCTGCTTTGGAGGGCTCACATGTCCCTATGGCCCACAGGGAACACAGCCGCACCCGGGTCTGTGCCAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR TCA 72 bp CTCATGGCCCCAGGCGAGATTCTTTCCCTCACCAAGTaGGAGCAGTCAGTGGCTGCCCTGACCCGGCTGGCG +
Preference number: 3 (lower is better)
Translates to: LMAPGEILSLTK*EQSVAALTRLA
Trigger: CGCCAGCCGGGTCAGGGCAGCCACTGACTGCTCTCACTTGGTGAGGGAAAGAATCTCGCCTGGGGCCATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 72 bp CAGATCATCCAGAGCCACGTAGGAGTGTGCCACGCCTaGGGCCACTGCCTCAAACACCACCTGGCGGGTGCA +
Preference number: 3 (lower is better)
Translates to: QIIQSHVGVCHA*GHCLKHHLAGA
Trigger: TGCACCCGCCAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTGGATGATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR TCA 72 bp ACTCAAAATCACAGGAACCTGCAGGACATGGGTGGGTaGGTGGTGCTGCCCCACGGCCCAAGCCCTGGGCAC +
Preference number: 3 (lower is better)
Translates to: TQNHRNLQDMGG*VVLPHGPSPGH
Trigger: GTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR TCA 72 bp TTTCCCTCACCAAGTGAGAGCAGTCAGTGGCTGCCCTaGCCCGGCTGGCGGTTCCTCCAGGATGGACCTTGC +
Preference number: 3 (lower is better)
Translates to: FPSPSESSQWLP*PGWRFLQDGPC
Trigger: GCAAGGTCCATCCTGGAGGAACCGCCAGCCGGGTCAGGGCAGCCACTGACTGCTCTCACTTGGTGAGGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR TCA 72 bp CCCTGGCTAGGGTCTGACCAAGTGCTGGATGTCACGTaGGGAAGCGGGGCCTTGTCTGGGGTGGTCTACGGA +
Preference number: 3 (lower is better)
Translates to: PWLGSDQVLDVT*GSGALSGVVYG
Trigger: TCCGTAGACCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACCCTAGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 72 bp CTGGAGGAGCAGATCATCCAGAGCCACGTAGGAGTGTaGCACGCCTGCGGCCACTGCCTCAAACACCACCTG +
Preference number: 3 (lower is better)
Translates to: LEEQIIQSHVGV*HACGHCLKHHL
Trigger: CAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTGGATGATCTGCTCCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 72 bp CCCAGGCACCCATTGGCCCAGCCGGACTCACAGAAGTaGTCAGGAAAACCCATGTGGTACCAGAAGCGGAGG +
Preference number: 3 (lower is better)
Translates to: PRHPLAQPDSQK*SGKPMWYQKRR
Trigger: CCTCCGCTTCTGGTACCACATGGGTTTTCCTGAGCACTTCTGTGAGTCCGGCTGGGCCAATGGGTGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 72 bp GAGTGGCTTCAAACACGATCTGGAACTCCTTGGCACTaGCTACCTCCACCTGGGCCTCCAGCCACTGGTGCC +
Preference number: 3 (lower is better)
Translates to: EWLQTRSGTPWH*LPPPGPPATGA
Trigger: GGCACCAGTGGCTGGAGGCCCAGGTGGAGGTAGCCAGTGCCAAGGAGTTCCAGATCGTGTTTGAAGCCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 72 bp TCTTGTCCTGTCTGGGTGCAGCATGCTCGCAGCTCCTaGGACCACACACTGGTAAGCCTGGCAAACCCCGAG +
Preference number: 3 (lower is better)
Translates to: SCPVWVQHARSS*DHTLVSLANPE
Trigger: CTCGGGGTTTGCCAGGCTTACCAGTGTGTGGTCCCAGGAGCTGCGAGCATGCTGCACCCAGACAGGACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 72 bp AGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTaGGGTGGTCTACGGATCACTGGTGACAGATGCCGG +
Preference number: 3 (lower is better)
Translates to: SAGCHVRKRGLV*GGLRITGDRCR
Trigger: CCGGCATCTGTCACCAGTGATCCGTAGACCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR CCA 72 bp AGAGGGTATTGGTTCTGCTACCACAAGGATGGGGCCTaGCAGACAGGCAGCTGCTGTCTGCAGACTTGGTGG +
Preference number: 3 (lower is better)
Translates to: RGYWFCYHKDGA*QTGSCCLQTWW
Trigger: CCACCAAGTCTGCAGACAGCAGCTGCCTGTCTGCCAGGCCCCATCCTTGTGGTAGCAGAACCAATACCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
3UTR GCA 72 bp CTTGTCTGGGGTGGTCTACGGATCACTGGTGACAGATaGCGGGAGGGTGACACCATCCGCATTGAAAAGGAT +
Preference number: 3 (lower is better)
Translates to: LVWGGLRITGDR*REGDTIRIEKD
Trigger: ATCCTTTTCAATGCGGATGGTGTCACCCTCCCGGCATCTGTCACCAGTGATCCGTAGACCACCCCAGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGCGGCCCGGCCCCCGGGGCCCAGCACGCCAGTTTCAAAGAAGGCAAAGTGGCCGGCAGGAGGCTGGGGTaGCCGGCAGAGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GGPAPGAQHASFKEGKVAGRRLG*PAEARC
Trigger: GCAGCGAGCCTCTGCCGGCCACCCCAGCCTCCTGCC...GGCCACTTTGCCTTCTTTGAAACTGGCGTGCTGGGCCCCGGGGGCCGGGCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGCGGCCCGGCCCCCGGGGCCCAGCACGCCAGTTTCAAAGAAGGCAAAGTGGCCGCCAGGCTGGCCCCTTaGGCCCTCCTCCGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGPAPGAQHASFKEGKVAARLAP*ALLRAS
Trigger: GGAGGCACGGAGGAGGGCCCAAGGGGCCAGCCTGGC...GGCCACTTTGCCTTCTTTGAAACTGGCGTGCTGGGCCCCGGGGGCCGGGCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGCGGCCCGGCCCCCGGGGCCCAGCACGCCAGTTTCAAAGAAGGCAAAGTGGCCTGGGCCTCCAGCCACTaGTGCCGCCGATGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: GGPAPGAQHASFKEGKVAWASSH*CRRCPP
Trigger: AGGCGGGCATCGGCGGCACCAGTGGCTGGAGGCCCA...GGCCACTTTGCCTTCTTTGAAACTGGCGTGCTGGGCCCCGGGGGCCGGGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCGACCCGCAGGGTGCCTaGGCTGCGGAGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSDPQGA*AAEAPV
Trigger: CACGGGAGCCTCCGCAGCCCAGGCACCCTGCGGGTC...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCGTGGTGCCACAGGCCTaGTCGTCCTCGCCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSVVPQA*SSSPPA
Trigger: CGCAGGGGGCGAGGACGAGCAGGCCTGTGGCACCAC...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCGCAGGGTGCCTGGGCTaGGGAGGCTCCCGTGGTACC +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGAGCLG*GGSRGT
Trigger: GGTACCACGGGAGCCTCCGCAGCCCAGGCACCCTGC...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGGGCTAGCAGGGTGCCTGGGCTaGGGAGGCTCCCGTGGTACC +
Preference number: 4 (lower is better)
Translates to: VLPHGPSPGHHDYEGKGLAGCLG*GGSRGT
Trigger: GGTACCACGGGAGCCTCCGCAGCCCAGGCACCCTGC...TAGCCCTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCCGCCGATGCCCGCCTaGGCCCCACACAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSPPMPA*APHSQL
Trigger: CAGCTGGCTGTGTGGGGCGCAGGCGGGCATCGGCGG...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCACTGGTGCCGCCGATaGCCGCCTGCGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSHWCRR*PPAPHT
Trigger: TGTGTGGGGCGCAGGCGGGCATCGGCGGCACCAGTG...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCGGGCCCCAGGCAGCATaGCCCGAGGCATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSGPQAA*PEALAC
Trigger: GCAGGCCAATGCCTCGGGCCATGCTGCCTGGGGCCC...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGGGCAGGAGGCTGGGGTaGCCGGCAGAGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLGRRLG*PAEARC
Trigger: GCAGCGAGCCTCTGCCGGCCACCCCAGCCTCCTGCC...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCAATGGGCCCCAGGGCTaGCTGGCCGCCCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGNGPQG*LAAQSG
Trigger: GCCACTCTGGGCGGCCAGCCAGCCCTGGGGCCCATT...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGGGCTAAACCCCGAGCCAGGCTaGCCCCTTGGGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VLPHGPSPGHHDYEGKGLNPEPG*PLGPSS
Trigger: GGAGGAGGGCCCAAGGGGCCAGCCTGGCTCGGGGTT...TAGCCCTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGCGGCCCGGCCCCCGGGGCCCAGCACGCCAGTTTCAAAGAAGGCAAAGTGGCCGCGGTTCCTCCAGGATaGACCTTGCCCTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GGPAPGAQHASFKEGKVAAVPPG*TLPWVW
Trigger: CCACACCCAGGGCAAGGTCCATCCTGGAGGAACCGC...GGCCACTTTGCCTTCTTTGAAACTGGCGTGCTGGGCCCCGGGGGCCGGGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGCTCTCCTGGGCTaGGACACGCCGCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSLALLG*DTPPLQ
Trigger: CTGCAGTGGCGGCGTGTCTCAGCCCAGGAGAGCCAG...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCAGTCAGTGGCTGCCCTaGCCCGGCTGGCGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSSQWLP*PGWRFL
Trigger: GAGGAACCGCCAGCCGGGTCAGGGCAGCCACTGACT...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGGTGGTGCCACAGGCCTaGTCGTCCTCGCCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQVVPQA*SSSPPA
Trigger: CGCAGGGGGCGAGGACGAGCAGGCCTGTGGCACCAC...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGGTGGCCCAGGCCTCGTaGCAGCGGTTGCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLVAQAS*QRLPWV
Trigger: CACCCAGGGCAACCGCTGGCACGAGGCCTGGGCCAC...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCAGGCTGAGCACCTGGTaGCTCCCGCGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGRLSTW*LPRSSR
Trigger: CCTGGAGGAGCGCGGGAGGCACCAGGTGCTCAGCCT...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GCTCGCAGCTCCTGGGACCACACACTGGTAAGCCTGGCAAACCCCGAGCCAGGCAGGCTGAGCACCTGGTaGCTCCCGCGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARSSWDHTLVSLANPEPGRLSTW*LPRSSR
Trigger: CCTGGAGGAGCGCGGGAGGCACCAGGTGCTCAGCCT...GCCTGGCTCGGGGTTTGCCAGGCTTACCAGTGTGTGGTCCCAGGAGCTGCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGCCTCCAGCCACTGGTaGCGCCGATGCCCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSASSHW*RRCPPA
Trigger: CGCAGGCGGGCATCGGCGGCACCAGTGGCTGGAGGC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGAGGGGGCGCCCAGGGTaGGCGAGGCCCCGTGGTAAC +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWRGRPG*ARPRGN
Trigger: GTTACCACGGGGCCTCGCCCACCCTGGGCGCCCCCT...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCGGGGGACAGTTGGCCTaGGGGGTGGGCAGACCACAG +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGGGQLA*GVGRPQ
Trigger: CTGTGGTCTGCCCACCCCCCAGGCCAACTGTCCCCC...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGGCTGTGGTCACGGCGTaGCCAGGAGGGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQAVVTA*PGGALR
Trigger: CCTGAGCGCCCCTCCTGGCCACGCCGTGACCACAGC...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCCTTGGCCTGTGGTGTaGTCGTGGTCAGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSPWPVV*SWSGPR
Trigger: CCGCGGCCCTGACCACGACCACACCACAGGCCAAGG...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCGCTGGTGGGAAAGGGTaGCCCAGGCCTCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSAGGKG*PRPRAS
Trigger: GCTGGCACGAGGCCTGGGCCACCCTTTCCCACCAGC...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCTGGGCCTCCAGCCACTaGTGCCGCCGATGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSWASSH*CRRCPP
Trigger: AGGCGGGCATCGGCGGCACCAGTGGCTGGAGGCCCA...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGGCGGCCCGGCCCCCGGGGCCCAGCACGCCAGTTTCAAAGAAGGCAAAGTGGTGCCCAGGCACCCATTaGCCCAGCCGGACTCACAGA +
Preference number: 4 (lower is better)
Translates to: QAARPPGPSTPVSKKAKWCPGTH*PSRTHR
Trigger: TCTGTGAGTCCGGCTGGGCCAATGGGTGCCTGGGCA...CCACTTTGCCTTCTTTGAAACTGGCGTGCTGGGCCCCGGGGGCCGGGCCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGCCTGGCCAGGGCTCCTaGAGTGGTTGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLPGQGS*SGWGPR
Trigger: CCTGGGTCCCCAACCACTGCAGGAGCCCTGGCCAGG...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCTCCAGTGCGGCCCCTaGCCTGTCTCGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSLQCGP*PVSEPA
Trigger: AGCTGGCTCCGAGACAGGGCAGGGGCCGCACTGGAG...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGGAGACACGCCGCCACTaGAGCCGCCCCACGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILETRRH*SRPTLA
Trigger: CGCCAGCGTGGGGCGGCTGCAGTGGCGGCGTGTCTC...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGGCCTCAGCGCCTAGCTaGCCCCAGGCCCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWASAPS*PQARCR
Trigger: TCTGCAGCGGGCCTGGGGGCAGCTAGGCGCTGAGGC...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GTAGGAGTGTGCCACGCCTGCGGCCACTGCCTCAAACACCACCTGGCGGGTGCAAGCGGTTGCCCTGGGTaGCTGACCGCGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: VGVCHACGHCLKHHLAGASGCPG*LTATTG
Trigger: ACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCT...TGCACCCGCCAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCCTCGTGCCAGCGGTTaGCCTGGGTGCCTGACCGCG +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWPRASG*PGCLTA
Trigger: CGCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GAGTGGTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGCGTCCAGCGCCATGGTaGCGTGGTATCCGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: EWCCPTAQALGTTTTKGKRPAPW*RGIRPG
Trigger: TCCGGGACGGATACCACGGCACCATGGCGCTGGACG...CTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGGCTCGCTCGGCCTaGACGTCCATGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSQARSA*TSMLPR
Trigger: CCTGGGCAGCATGGACGTGCAGGCCGAGCGAGCCTG...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCCGCCGATGCCCGCCTaGGCCCCACACAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISPPMPA*APHSQL
Trigger: CAGCTGGCTGTGTGGGGCGCAGGCGGGCATCGGCGG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCGCCTCCAGCCACTGGTaGCGCCGATGCCCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISASSHW*RRCPPA
Trigger: CGCAGGCGGGCATCGGCGGCACCAGTGGCTGGAGGC...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGGCCTCCAGCCACTGGTaGCGCCGATGCCCGCCTGCG +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILASSHW*RRCPPA
Trigger: CGCAGGCGGGCATCGGCGGCACCAGTGGCTGGAGGC...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCTGGCACAGACCCGGGTaGGGCTGTGTTCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSWHRPG*GCVPRA
Trigger: AGCCCGGGGAACACAGCCGCACCCGGGTCTGTGCCA...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCAGCTCCCCTTCTTCTaGAGCCAGCGCCGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSQLPFF*SQRRPP
Trigger: TGGGGGACGGCGCTGGCTGCAGAAGAAGGGGAGCTG...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCTGCTCCTGGACCCCTaGTGCCCCCGTTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWLLLDP*CPRCPG
Trigger: GCCTGGGCAACGGGGGCAGCAGGGGTCCAGGAGCAG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp GCCCCCGTTGCCCAGGCACCCATTGGCCCAGCCGGACTCACAGAAGTGCTCAGGTGGTCCCTCAGCCTCTaGTGGCTCCTGGGGTTCACC +
Preference number: 4 (lower is better)
Translates to: APVAQAPIGPAGLTEVLRWSLSL*WLLGFT
Trigger: GGTGAACCCCAGGAGCCAGCAGAGGCTGAGGGACCA...CCTGAGCACTTCTGTGAGTCCGGCTGGGCCAATGGGTGCCTGGGCAACGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCCAGGGCTCCTGCAGTaGTTGGGGACCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSPGLLQ*LGTQAQ
Trigger: CTGGGCCTGGGTCCCCAACCACTGCAGGAGCCCTGG...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCAGGGGGCGCCCAGGGTaGGCGAGGCCCCGTGGTAAC +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISRGRPG*ARPRGN
Trigger: GTTACCACGGGGCCTCGCCCACCCTGGGCGCCCCCT...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGGGACCACCAGCGCGGTaGTTCCGGGACCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQGPPAR*FRDQPS
Trigger: GGAAGGCTGGTCCCGGAACCACCGCGCTGGTGGTCC...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCGCAGCGGCTGCAGGGTaGACACCTCCGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSAAAAG*TPPRLV
Trigger: GACCAGTCTCGGAGGTGTCCACCCTGCAGCCGCTGC...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTGCCAGCGGTTGCCCTaGGTGCCTGACCGCGACCAC +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLCQRLP*VPDRDH
Trigger: GTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCA...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCGCCTCCAGAGACCTTaGCCTCCAGGGGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSRLQRP*PPGEKP
Trigger: CGGCTTCTCCCCTGGAGGCCAAGGTCTCTGGAGGCG...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCCATGGCCCGAGGCATTaGCCTGCCGCCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGHGPRH*PAASRD
Trigger: GTCTCTGGAGGCGGCAGGCCAATGCCTCGGGCCATG...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGGGGCCCCAGGCAGCATaGCCCGAGGCATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWGPQAA*PEALAC
Trigger: GCAGGCCAATGCCTCGGGCCATGCTGCCTGGGGCCC...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp TCGCAGCTCCTGGGACCACACACTGGTAAGCCTGGCAAACCCCGAGCCAGGCTGGTCAGGGAGGCCGTCTaGCCCCGGGGTAGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: SQLLGPHTGKPGKPRARLVREAV*PRGSAS
Trigger: AGACGCACTACCCCGGGGCCAGACGGCCTCCCTGAC...CAGCCTGGCTCGGGGTTTGCCAGGCTTACCAGTGTGTGGTCCCAGGAGCTGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCGACCCGCAGGGTGCCTaGGCTGCGGAGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISDPQGA*AAEAPV
Trigger: CACGGGAGCCTCCGCAGCCCAGGCACCCTGCGGGTC...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGAATGGGCCCCAGGGCTaGCTGGCCGCCCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWNGPQG*LAAQSG
Trigger: GCCACTCTGGGCGGCCAGCCAGCCCTGGGGCCCATT...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GAGTGGTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGGCCTCAAACACCACCTaGCGGGTGCAGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EWCCPTAQALGTTTTKGKASNTT*RVQGRA
Trigger: TGCCCTGCCCTGCACCCGCCAGGTGGTGTTTGAGGC...CTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCTCACAGGAACCTGGCTaGGGGCAGGGCCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSSQEPG*GQGPSW
Trigger: CCAGGACGGGCCCTGCCCTCAGCCAGGTTCCTGTGA...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CCCGCCTGCGCCCCACACAGCCAGCTGGCCCTGAGCACTGTGCAGCAGTACCTTGCAGCACCAGGAGCATaGGCAATAGGAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PACAPHSQLALSTVQQYLAAPGA*AIGGHC
Trigger: GCAGTGCCCTCCTATTGCTCATGCTCCTGGTGCTGC...AAGGTACTGCTGCACAGTGCTCAGGGCCAGCTGGCTGTGTGGGGCGCAGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCAGCTCCCCCTTGTCTaGGAGCAGGGCCAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWQLPLV*EQGQGV
Trigger: CACGCCCTGGCCCTGCTCTCAGACAAGGGGGAGCTG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGGCGGCCTGTGGTCACTaGCAACTCCTGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQAACGH*QLLPAR
Trigger: CCTGGCTGGCAGGAGTTGGCAGTGACCACAGGCCGC...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGTCCCCGTCGCACAGCTaGTGGGGCTCCACGCAGACC +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWSPSHS*WGSTQT
Trigger: GGTCTGCGTGGAGCCCCAGCAGCTGTGCGACGGGGA...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCCAGGAGGCAGCGGCTaGAGGGTGGACACCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWPGGSG*RVDTSE
Trigger: CTCGGAGGTGTCCACCCTGCAGCCGCTGCCTCCTGG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGAGACACGCCGCCACTaGAGCCGCCCCACGCTGGCG +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPETRRH*SRPTLA
Trigger: CGCCAGCGTGGGGCGGCTGCAGTGGCGGCGTGTCTC...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCCTCGTGCCAGCGGTTaGCCTGGGTGCCTGACCGCG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISPRASG*PGCLTA
Trigger: CGCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCGTGGCCCAGGCCTCGTaGCAGCGGTTGCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETVAQAS*QRLPWV
Trigger: CACCCAGGGCAACCGCTGGCACGAGGCCTGGGCCAC...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCCCGAGGCATTGGCCTaGCGCCTCCAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSPEALA*RLQRPW
Trigger: CCAAGGTCTCTGGAGGCGGCAGGCCAATGCCTCGGG...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCAGGCTCGCTCGGCCTaGACGTCCATGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWQARSA*TSMLPR
Trigger: CCTGGGCAGCATGGACGTGCAGGCCGAGCGAGCCTG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCAGTGGCCTGCCTCTGTaGCCAGGGTGTGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSSGLPL*PGCGPQ
Trigger: CTGTGGACCACACCCTGGGCACAGAGGCAGGCCACT...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCCGCCGATGCCCGCCTaGGCCCCACACAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAPPMPA*APHSQL
Trigger: CAGCTGGCTGTGTGGGGCGCAGGCGGGCATCGGCGG...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCACACTGGTGCCGCCGATaGCCGCCTGCGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAHWCRR*PPAPHT
Trigger: TGTGTGGGGCGCAGGCGGGCATCGGCGGCACCAGTG...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGCACGCCTGCGGCCACTaGCTCAAACACCACCTGGCG +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLHACGH*LKHHLA
Trigger: CGCCAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTG...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGGGGTCCTGGGGCTCCTaGACGCCTAACCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEGSWGS*TPNQGR
Trigger: CCGCCCCTGGTTAGGCGTGCAGGAGCCCCAGGACCC...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCCAGGGCTCCTGCAGTaGTTGGGGACCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWPGLLQ*LGTQAQ
Trigger: CTGGGCCTGGGTCCCCAACCACTGCAGGAGCCCTGG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCAAGTTGCACACGGCCTaGCCAGGGCTCCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSKLHTA*PGLLQW
Trigger: CCACTGCAGGAGCCCTGGCCAGGCCGTGTGCAACTT...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGGCCACAGCGCCCCTGTaGGTGGCATTTCGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLATAPL*VAFRVA
Trigger: TGCCACCCGAAATGCCACCCACAGGGGCGCTGTGGC...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCTGTGGTCACGGCGTaGCCAGGAGGGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAAVVTA*PGGALR
Trigger: CCTGAGCGCCCCTCCTGGCCACGCCGTGACCACAGC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGGCAGCGGCTGCAGGGTaGACACCTCCGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQAAAAG*TPPRLV
Trigger: GACCAGTCTCGGAGGTGTCCACCCTGCAGCCGCTGC...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGCAGCAGCAGCTGCACTaGACCCCTGGCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLQQQLH*TPGSPG
Trigger: CCCAGGAGAGCCAGGGGTCCAGTGCAGCTGCTGCTG...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GCCCCCGTTGCCCAGGCACCCATTGGCCCAGCCGGACTCACAGAAGTGCTCAGGCCCTCGAACAGCAGCTaGTACTGGGCATGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: APVAQAPIGPAGLTEVLRPSNSS*YWAWEP
Trigger: TGGCTCCCATGCCCAGTACCAGCTGCTGTTCGAGGG...CCTGAGCACTTCTGTGAGTCCGGCTGGGCCAATGGGTGCCTGGGCAACGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCCATCGTCCAGCGCCATaGTGCCGTGGTATCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGHRPAP*CRGIRP
Trigger: GGGACGGATACCACGGCACCATGGCGCTGGACGATG...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GAGTGGTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGCATCGTCCAGCGCCATaGTGCCGTGGTATCCGTCCC +
Preference number: 4 (lower is better)
Translates to: EWCCPTAQALGTTTTKGKHRPAP*CRGIRP
Trigger: GGGACGGATACCACGGCACCATGGCGCTGGACGATG...CTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGGTCAGGGAGGCCGTCTaGCCCCGGGGTAGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWVREAV*PRGSAS
Trigger: AGACGCACTACCCCGGGGCCAGACGGCCTCCCTGAC...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp TCGCAGCTCCTGGGACCACACACTGGTAAGCCTGGCAAACCCCGAGCCAGGCTGGTCAGACAAGCAGGCTaGGCCAGGGGCCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SQLLGPHTGKPGKPRARLVRQAG*ARGLCS
Trigger: GGAGCACAGGCCCCTGGCCCAGCCTGCTTGTCTGAC...CAGCCTGGCTCGGGGTTTGCCAGGCTTACCAGTGTGTGGTCCCAGGAGCTGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCAGGCAAGCCCGCCGTaGGCACTGAGGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSQASPP*ALRLST
Trigger: GGTGCTCAGCCTCAGTGCCCACGGCGGGCTTGCCTG...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCATGGGCCTCCAGCCACTaGTGCCGCCGATGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAWASSH*CRRCPP
Trigger: AGGCGGGCATCGGCGGCACCAGTGGCTGGAGGCCCA...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGGCCCCAGGGCTGGCTaGCCGCCCAGAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAGPRAG*PPRVAS
Trigger: TGAAGCCACTCTGGGCGGCCAGCCAGCCCTGGGGCC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGGGCCCCAGGGCTGGCTaGCCGCCCAGAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEGPRAG*PPRVAS
Trigger: TGAAGCCACTCTGGGCGGCCAGCCAGCCCTGGGGCC...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GAGCAGATCATCCAGAGCCACGTAGGAGTGTGCCACGCCTGCGGCCACTGCCTCCCACGGCCCAAGCCCTaGGCACCACGACTACGAAGG +
Preference number: 4 (lower is better)
Translates to: EQIIQSHVGVCHACGHCLPRPKP*APRLRR
Trigger: CCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGG...GAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTGGATGATCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GCTCGCAGCTCCTGGGACCACACACTGGTAAGCCTGGCAAACCCCGAGCCAGGCACATGGGTGGGTGAGTaGTGCTGCCCCACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: ARSSWDHTLVSLANPEPGTWVGE*CCPTAQ
Trigger: TTGGGCCGTGGGGCAGCACCACTCACCCACCCATGT...GCCTGGCTCGGGGTTTGCCAGGCTTACCAGTGTGTGGTCCCAGGAGCTGCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GAGTGGTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGCACAGGGCCTGGGCCTaGCAGCTCTCTTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: EWCCPTAQALGTTTTKGKHRAWA*QLSCPV
Trigger: GACAGGACAAGAGAGCTGCCAGGCCCAGGCCCTGTG...CTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCACCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCGGAGGGCACAGGGCCTaGGCCTGGCAGCTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSGGHRA*AWQLSC
Trigger: ACAAGAGAGCTGCCAGGCCCAGGCCCTGTGCCCTCC...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCAGTGTGTGGTCTGAGTaGGGCCCAGGACCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGSVWSE*GPGPSS
Trigger: ACTGGAGGGTCCTGGGCCTCACTCAGACCACACACT...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCGCAGTTGGAGGTGCCTaGGGCTTGGAATTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGAVGGA*GLEFGA
Trigger: AGCCCCGAATTCCAAGCCTCAGGCACCTCCAACTGC...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCTGGCTCTCCTGGGCTaGGACACGCCGCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISLALLG*DTPPLQ
Trigger: CTGCAGTGGCGGCGTGTCTCAGCCCAGGAGAGCCAG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGGCCAAGGAGGGGTGTaGGGACCCGGGCCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGGQGGV*GPGPQR
Trigger: GCGCTGAGGCCCGGGTCCTCACACCCCTCCTTGGCC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGCCAAGGAGGGGTGTaGGGACCCGGGCCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRGQGGV*GPGPQR
Trigger: GCGCTGAGGCCCGGGTCCTCACACCCCTCCTTGGCC...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CCCGCCTGCGCCCCACACAGCCAGCTGGCCCTGAGCACTGTGCAGCAGTACCTTCTTTCCCTCACCAAGTaGGAGCAGTCAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PACAPHSQLALSTVQQYLLSLTK*EQSVAA
Trigger: GGCAGCCACTGACTGCTCTCACTTGGTGAGGGAAAG...AAGGTACTGCTGCACAGTGCTCAGGGCCAGCTGGCTGTGTGGGGCGCAGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp GAGCAGATCATCCAGAGCCACGTAGGAGTGTGCCACGCCTGCGGCCACTGCCTCGGCCATAGGGACATGTaGGCCCTCCAAAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EQIIQSHVGVCHACGHCLGHRDM*ALQSSP
Trigger: GGGGCTGCTTTGGAGGGCTCACATGTCCCTATGGCC...GAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTGGATGATCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGGCCAGAGGGAGCAGTaGGGCCACACAGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAGQREQ*GHTGCL
Trigger: CAGGCACCCTGTGTGGCCGCACTGCTCCCTCTGGCC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCCTGGCCAGGGCTCCTaGAGTGGTTGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILPGQGS*SGWGPR
Trigger: CCTGGGTCCCCAACCACTGCAGGAGCCCTGGCCAGG...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCCAGGAAGGAGCCCTGTaGACTGTTCCGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGQEGAL*TVPAVV
Trigger: GACCACAGCCGGAACAGTGCACAGGGCTCCTTCCTG...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCTCGCCCCCTGCGCACTaGTCCTCGAAGTCACACAGT +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSSPPAH*SSKSHS
Trigger: ACTGTGTGACTTCGAGGAGCAGTGCGCAGGGGGCGA...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGACACTCCGTGGGTGCTaGTGGCACCTGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWTLRGC*WHLGPG
Trigger: TCCAGGCCCCAGGTGCCAGCAGCACCCACGGAGTGT...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGTGGCCCAGGCCTCGTaGCAGCGGTTGCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRVAQAS*QRLPWV
Trigger: CACCCAGGGCAACCGCTGGCACGAGGCCTGGGCCAC...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCCCTGCACGTCCATGCTaGCCAGGCGCCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETPARPC*PGARQA
Trigger: GGCTTGCCTGGCGCCTGGGCAGCATGGACGTGCAGG...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCCAGGCTCGCTCGGCCTaGACGTCCATGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETQARSA*TSMLPR
Trigger: CCTGGGCAGCATGGACGTGCAGGCCGAGCGAGCCTG...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGGGAGTGTGCCACGCCTaGGGCCACTGCCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQGVCHA*GHCLKH
Trigger: GTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCC...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGGCACAGACCCGGGTaGGGCTGTGTTCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETWHRPG*GCVPRA
Trigger: AGCCCGGGGAACACAGCCGCACCCGGGTCTGTGCCA...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCGCATATCCTGAGACCTaGAGCCTGTCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGAYPET*SLSQPG
Trigger: CCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGC...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGGGCTAGCATATCCTGAGACCTaGAGCCTGTCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VLPHGPSPGHHDYEGKGLAYPET*SLSQPG
Trigger: CCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGC...TAGCCCTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCTGCTGCTCAGGGCCTaGCATGCCAGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILLLLRA*HASSRE
Trigger: CTCCCGGGAGCTGGCATGGCAGGCCCTGAGCAGCAG...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR GCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCTCCAGGATGGACCTTaGCCTGGGTGTGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQLQDGP*PGCGHR
Trigger: CCTGTGCCCACACCCAGGGCAAGGTCCATCCTGGAG...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGGGCTGGACAGAGGCATaGTTGGGCCAGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQGWTEA*LGQREQ
Trigger: CTGCTCCCTCTGGCCCAACCATGCCTCTGTCCAGCC...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCGGGCAGCAGGTGGCTaGACAGAGGCATGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWRAAGG*TEAWLG
Trigger: GCCCAACCATGCCTCTGTCCAGCCACCTGCTGCCCG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCGGGCAGCAGGTGGCTaGACAGAGGCATGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSRAAGG*TEAWLG
Trigger: GCCCAACCATGCCTCTGTCCAGCCACCTGCTGCCCG...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGTGCCTCTCGCAGGGTTaGCGAGCGCAGGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPECLSQG*RAQGCG
Trigger: ACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCA...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCTCTCCAGAGGCCGCGTaGTACCAGAGCCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSSPEAA*YQSLSL
Trigger: CAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGA...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCGCCCCTGTGGGTaGCATTTCGGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSQRPCG*HFGWQR
Trigger: TCTCTGCCACCCGAAATGCCACCCACAGGGGCGCTG...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCGGGGGACAGTTGGCCTaGGGGGTGGGCAGACCACAG +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETGGQLA*GVGRPQ
Trigger: CTGTGGTCTGCCCACCCCCCAGGCCAACTGTCCCCC...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCAGCAGCAGCTGCACTaGACCCCTGGCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSQQQLH*TPGSPG
Trigger: CCCAGGAGAGCCAGGGGTCCAGTGCAGCTGCTGCTG...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCCCTGTGGTGTGGTCGTaGTCAGGGCCGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETPVVWS*SGPRLS
Trigger: GGAGAGCCGCGGCCCTGACCACGACCACACCACAGG...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GTAGGAGTGTGCCACGCCTGCGGCCACTGCCTCAAACACCACCTGGCGGGTGCACGCAGAGTCCCAATCTaGGGCCCATGGAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: VGVCHACGHCLKHHLAGARRVPI*GPWRWY
Trigger: GTACCACCTCCATGGGCCCCAGATTGGGACTCTGCG...TGCACCCGCCAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCCCCCTTCCCGTCTCATaGCTAGGCGCAGAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGPLPVS*LGAESQ
Trigger: TTGGGACTCTGCGCCTAGCCATGAGACGGGAAGGGG...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCCAGCGGTTGCCCTaGGTGCCTGACCGCGACCAC +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISCQRLP*VPDRDH
Trigger: GTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCA...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCGCTGGTGGGAAAGGGTaGCCCAGGCCTCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETAGGKG*PRPRAS
Trigger: GCTGGCACGAGGCCTGGGCCACCCTTTCCCACCAGC...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGCGCCATGGTGCCGTaGTATCCGTCCCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILSAMVP*YPSRRP
Trigger: GGGCCTCCGGGACGGATACCACGGCACCATGGCGCT...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCATCGTCCAGCGCCATaGTGCCGTGGTATCCGTCCC +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSHRPAP*CRGIRP
Trigger: GGGACGGATACCACGGCACCATGGCGCTGGACGATG...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GCTGCTGGCAATGCTGCCCAGCCAGATACTCCACGTCATCCAGGGCAATGGGCCCGCCTCCAGAGACCTTaGCCTCCAGGGGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: AAGNAAQPDTPRHPGQWARLQRP*PPGEKP
Trigger: CGGCTTCTCCCCTGGAGGCCAAGGTCTCTGGAGGCG...GGCCCATTGCCCTGGATGACGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGGGCCCCAGGCAGCATaGCCCGAGGCATTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRGPQAA*PEALAC
Trigger: GCAGGCCAATGCCTCGGGCCATGCTGCCTGGGGCCC...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp TCATCCAGGGCAATGGGCCCCAGGGCTGGCTGGCCGCCCAGAGTGGCTTCAAACAGTGGTATGGTCTGTTaGGGGGCCCCAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SSRAMGPRAGWPPRVASNSGMVC*GAPGSM
Trigger: CATGCTGCCTGGGGCCCCCCAACAGACCATACCACT...GTTTGAAGCCACTCTGGGCGGCCAGCCAGCCCTGGGGCCCATTGCCCTGGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGGTCAGGGAGGCCGTCTaGCCCCGGGGTAGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEVREAV*PRGSAS
Trigger: AGACGCACTACCCCGGGGCCAGACGGCCTCCCTGAC...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGGTCAGACAAGCAGGCTaGGCCAGGGGCCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWVRQAG*ARGLCS
Trigger: GGAGCACAGGCCCCTGGCCCAGCCTGCTTGTCTGAC...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCTGAGGCTGAGCACCTaGTGCCTCCCGCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISLRLST*CLPRSS
Trigger: GGAGGAGCGCGGGAGGCACCAGGTGCTCAGCCTCAG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGTCTGTGCCCAGGGTGTaGTCCACAGGGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPESVPRV*STGGWG
Trigger: CCCCCAGCCCCCTGTGGACCACACCCTGGGCACAGA...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGGGCAGGAGGCTGGGGTaGCCGGCAGAGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRGRRLG*PAEARC
Trigger: GCAGCGAGCCTCTGCCGGCCACCCCAGCCTCCTGCC...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCTGTGTTCCCCGGGCTaGGGGCAGGCTGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWLCSPG*GQAAGN
Trigger: ATTGCCAGCAGCCTGCCCCCAGCCCGGGGAACACAG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGGGCTAGCCTCTGTGTTGCTCTaGAAGGGGCAGCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VLPHGPSPGHHDYEGKGLASVLL*KGQLPF
Trigger: GAAGGGGAGCTGCCCCTTCCAGAGCAACACAGAGGC...TAGCCCTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGTGTCTGCAGACTTGGTaGGGCTCATGGCCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQCLQTW*GSWPQA
Trigger: CGCCTGGGGCCATGAGCCCCACCAAGTCTGCAGACA...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGGGCTATGCTGTCTGCAGACTTaGTGGGGCTCATGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VLPHGPSPGHHDYEGKGLCCLQT*WGSWPQ
Trigger: CTGGGGCCATGAGCCCCACCAAGTCTGCAGACAGCA...TAGCCCTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCTGTGGCGGCCACAGGTaGGTGGGTTCTCATCAGACA +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSCGGHR*VGSHQT
Trigger: TGTCTGATGAGAACCCACTCACCTGTGGCCGCCACA...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGTTGCCCTGGGTGCCTaGCCGCGACCACAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAVALGA*PRPQVC
Trigger: ACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAAC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR TCA 90 bp CCCGCCTGCGCCCCACACAGCCAGCTGGCCCTGAGCACTGTGCAGCAGTACCTTGGAGAAGCCGCAGTCTaGGTCCTCAAAGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: PACAPHSQLALSTVQQYLGEAAV*VLKGAV
Trigger: TACTGCTCCTTTGAGGACTCAGACTGCGGCTTCTCC...AAGGTACTGCTGCACAGTGCTCAGGGCCAGCTGGCTGTGTGGGGCGCAGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGGGCCTCAGCATATCCTaGGACCTGCAGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLGLSIS*DLQPVP
Trigger: TGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCC...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGGCCAGAGGGAGCAGTaGGGCCACACAGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRGQREQ*GHTGCL
Trigger: CAGGCACCCTGTGTGGCCGCACTGCTCCCTCTGGCC...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCATGGCGAGCGCAGGGCTaGGGTGGATGCCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAWRAQG*GGCLFP
Trigger: GGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCA...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGTGGCGAGCGCAGGGCTaGGGTGGATGCCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEWRAQG*GGCLFP
Trigger: GGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCA...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGGGAAGTCACCCCGGATaGGGCCTGTGGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWGSHPG*GLWSLP
Trigger: TGGCAGTGACCACAGGCCGCATCCGGGGTGACTTCC...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGGAAGTCACCCCGGATaGGGCCTGTGGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSGSHPG*GLWSLP
Trigger: TGGCAGTGACCACAGGCCGCATCCGGGGTGACTTCC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGCAAGATGCCCCTGCTTaGAGGAATCCTGGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLQDAPA*RNPGAA
Trigger: CGCGGCTCCAGGATTCCTGCAAGCAGGGGCATCTTG...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGTGCCCCCAGGCCCGCTaGAGAGACAGGAAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILCPQAR*RDRKCP
Trigger: TGGGCACTTCCTGTCTCTGCAGCGGGCCTGGGGGCA...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGGCCTCAGCGCCTAGCTaGCCCCAGGCCCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRASAPS*PQARCR
Trigger: TCTGCAGCGGGCCTGGGGGCAGCTAGGCGCTGAGGC...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGCGGTTGCCCTGGGTaGCTGACCGCGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILSGCPG*LTATTG
Trigger: ACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCT...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCGTCCAGCGCCATGGTaGCGTGGTATCCGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISRPAPW*RGIRPG
Trigger: TCCGGGACGGATACCACGGCACCATGGCGCTGGACG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAAGGCTGAGCACCTGGTaGCTCCCGCGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRRLSTW*LPRSSR
Trigger: CCTGGAGGAGCGCGGGAGGCACCAGGTGCTCAGCCT...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCACGTCCATGCTaGCCAGGCGCCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRPARPC*PGARQA
Trigger: GGCTTGCCTGGCGCCTGGGCAGCATGGACGTGCAGG...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGCACTGGTGCCGCCGATaGCCGCCTGCGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRHWCRR*PPAPHT
Trigger: TGTGTGGGGCGCAGGCGGGCATCGGCGGCACCAGTG...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCGCAATAGGAGGGCACTaGCAACCACAGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSAIGGH*QPQLAQ
Trigger: CTGTGCCAGCTGTGGTTGGCAGTGCCCTCCTATTGC...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCGCAATAGGAGGGCACTaGCAACCACAGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGAIGGH*QPQLAQ
Trigger: CTGTGCCAGCTGTGGTTGGCAGTGCCCTCCTATTGC...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCAGCTCCCCTTCTTCTaGAGCCAGCGCCGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILQLPFF*SQRRPP
Trigger: TGGGGGACGGCGCTGGCTGCAGAAGAAGGGGAGCTG...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CCCAGGCGAGATTCTTTCCCTCACCAAGTGAGAGCAGTCAGTGGCTGCCCTGACTGGGTGGGTGAGTGGTaGTGCCCCACGGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PRRDSFPHQVRAVSGCPDWVGEW*CPTAQA
Trigger: GGCTTGGGCCGTGGGGCAGCACCACTCACCCACCCA...GTCAGGGCAGCCACTGACTGCTCTCACTTGGTGAGGGAAAGAATCTCGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTTGTCCTGTCTGGGTaGAGCATGCTCGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSLVLSG*SMLAAP
Trigger: AGGAGCTGCGAGCATGCTGCACCCAGACAGGACAAG...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCAAGTTGCACACGGCCTaGCCAGGGCTCCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSKLHTA*PGLLQW
Trigger: CCACTGCAGGAGCCCTGGCCAGGCCGTGTGCAACTT...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCGGGTGGCATTTCGGGTaGCAGAGAAGGTCACTCGGA +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSGWHFG*QRRSLG
Trigger: TCCGAGTGACCTTCTCTGCCACCCGAAATGCCACCC...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCAGCGCCCCTGTGGGTaGCATTTCGGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSQRPCG*HFGWQR
Trigger: TCTCTGCCACCCGAAATGCCACCCACAGGGGCGCTG...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCACAGCGCCCCTGTaGGTGGCATTTCGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAATAPL*VAFRVA
Trigger: TGCCACCCGAAATGCCACCCACAGGGGCGCTGTGGC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGACCTTGTTCTGGCAGTaGTGGTGTCCCGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQTLFWQ*WCPGGQ
Trigger: CTGTCCCCCGGGACACCACCACTGCCAGAACAAGGT...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCAAGTCGGTGGCTATGTaGCGGCCACAGGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSKSVAM*RPQVSG
Trigger: CCCACTCACCTGTGGCCGCCACATAGCCACCGACTT...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCGCACTGTTCCGGCTGTaGTCACGGCGTGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETALFRL*SRRGQE
Trigger: CTCCTGGCCACGCCGTGACCACAGCCGGAACAGTGC...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCGTCTGCAGGAACAGCTaGAGGCAGCCAGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSVCRNS*RQPASD
Trigger: GTCTGAGGCTGGCTGCCTCCAGCTGTTCCTGCAGAC...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCTTGCAGGAATCCTaGAGCCGCGAGCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISCLQES*SRELGG
Trigger: GCCGCCCAGCTCGCGGCTCCAGGATTCCTGCAAGCA...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCGGGACTCAAAGTCTGTaGTGCCACAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGGTQSL*CHRPAR
Trigger: ACGAGCAGGCCTGTGGCACCACAGACTTTGAGTCCC...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGACCCCTGGCTCTCCTaGGCTGAGACACGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRDPWLS*AETRRH
Trigger: GTGGCGGCGTGTCTCAGCCCAGGAGAGCCAGGGGTC...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGGCTGCACTGGACCCCTaGCTCTCCTGGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWAALDP*LSWAET
Trigger: TGTCTCAGCCCAGGAGAGCCAGGGGTCCAGTGCAGC...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCGCTGGTGGGAAAGGGTaGCCCAGGCCTCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAAGGKG*PRPRAS
Trigger: GCTGGCACGAGGCCTGGGCCACCCTTTCCCACCAGC...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAAGCGCCATGGTGCCGTaGTATCCGTCCCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRSAMVP*YPSRRP
Trigger: GGGCCTCCGGGACGGATACCACGGCACCATGGCGCT...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGCATGGCCCGAGGCATTaGCCTGCCGCCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEHGPRH*PAASRD
Trigger: GTCTCTGGAGGCGGCAGGCCAATGCCTCGGGCCATG...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGTCAGACAAGCAGGCTaGGCCAGGGGCCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAVRQAG*ARGLCS
Trigger: GGAGCACAGGCCCCTGGCCCAGCCTGCTTGTCTGAC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CTGGCCGCCCAGAGTGGCTTCAAACACGATCTGGAACTCCTTGGCACTGGCTACCAGGCAAGCCCGCCGTaGGCACTGAGGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: LAAQSGFKHDLELLGTGYQASPP*ALRLST
Trigger: GGTGCTCAGCCTCAGTGCCCACGGCGGGCTTGCCTG...GTAGCCAGTGCCAAGGAGTTCCAGATCGTGTTTGAAGCCACTCTGGGCGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGATCTGTGCCCAGGGTGTaGTCCACAGGGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRSVPRV*STGGWG
Trigger: CCCCCAGCCCCCTGTGGACCACACCCTGGGCACAGA...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCTGGCTACCTCCACCTaGGCCTCCAGCCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILLATST*ASSHWC
Trigger: GCACCAGTGGCTGGAGGCCCAGGTGGAGGTAGCCAG...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCGCTGGCCGCCCAGAGTaGCTTCAAACACGATCTGGA +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSAGRPE*LQTRSG
Trigger: TCCAGATCGTGTTTGAAGCCACTCTGGGCGGCCAGC...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGCAGGTGTCCGGTCCCTaGCTAGGGTCTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLQVSGP*LGSDQV
Trigger: CACTTGGTCAGACCCTAGCCAGGGACCGGACACCTG...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCACAGCTGGCACAGACCCGGGTGCGGCTGTGTTCCCTGTGGGCCATAGGGACACTCTCTTGTCCTGTCTaGGTGCAGCATGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PQLAQTRVRLCSLWAIGTLSCPV*VQHARS
Trigger: GCTGCGAGCATGCTGCACCCAGACAGGACAAGAGAG...TGTCCCTATGGCCCACAGGGAACACAGCCGCACCCGGGTCTGTGCCAGCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GCTGCTGGCAATGCTGCCCAGCCAGATACTCCACGTCATCCAGGGCAATGGGCCTCCCTCAGCCTCTGCTaGCTCCTGGGGTTCACCCCT +
Preference number: 4 (lower is better)
Translates to: AAGNAAQPDTPRHPGQWASLSLC*LLGFTP
Trigger: AGGGGTGAACCCCAGGAGCCAGCAGAGGCTGAGGGA...GGCCCATTGCCCTGGATGACGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGGACATGTGAGCCCTCCAAAGCAGCCCCCACATCTGGGGCTAAGGAGGAAGCCAAGCCTGGGGCTGCATaGTCCCTCAGCCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GTCEPSKAAPTSGAKEEAKPGAA*SLSLCW
Trigger: CCAGCAGAGGCTGAGGGACCATGCAGCCCCAGGCTT...GGCTTCCTCCTTAGCCCCAGATGTGGGGGCTGCTTTGGAGGGCTCACATGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCGGCTGTGTTCCCTGTaGGCCATAGGGACATGTGAG +
Preference number: 4 (lower is better)
Translates to: GQGTPRPQHILRPAACPSRLCSL*AIGTCE
Trigger: CTCACATGTCCCTATGGCCCACAGGGAACACAGCCG...GCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCCCAGTGTGTGGTCTaGGTGAGGCCCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPAQCVV*VRPRTL
Trigger: GAGGGTCCTGGGCCTCACTCAGACCACACACTGGGC...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGGCAGTTGGAGGTGCCTaGGGCTTGGAATTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWAVGGA*GLEFGA
Trigger: AGCCCCGAATTCCAAGCCTCAGGCACCTCCAACTGC...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGTGCTGGATGTCACGTaGGGAAGCGGGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSVLDVT*GSGALS
Trigger: AGACAAGGCCCCGCTTCCTCACGTGACATCCAGCAC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR TCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGGCCTCAGCATATCCTaGGACCTGCAGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSGLSIS*DLQPVP
Trigger: TGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCAGTCACACACGAAGTTaGACACGGCCTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSSHTRS*TRPGQG
Trigger: GCCCTGGCCAGGCCGTGTGCAACTTCGTGTGTGACT...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCAGCCGCAGGGGTCCTaGTCGAAGTCACAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISQPQGS*SKSQAK
Trigger: CTTCGCCTGTGACTTCGAGCAGGACCCCTGCGGCTG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGCTCCAGTGCGGCCCCTaGCCTGTCTCGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRLQCGP*PVSEPA
Trigger: AGCTGGCTCCGAGACAGGGCAGGGGCCGCACTGGAG...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGACCAGCCCAAGTCGGTaGCCAGTGTGTGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLTSPSR*PVCGLS
Trigger: ACTCAGACCACACACTGGGCACCGACTTGGGCTGGT...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCTTGCAAGAGGAGGCTaGCTCTCGCAGGGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWLARGG*LSQGWR
Trigger: TCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGACCAGAGCCTCAGCTTaGAAGAGGAGGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLTRASA*KRRLPL
Trigger: GAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGT...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGCAGGGTCAGGGTCTCTaGGCCATGGGTCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEQGQGL*AMGQLH
Trigger: GTGGAGCTGACCCATGGCGCAGAGACCCTGACCCTG...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCAGGGCCCTGTGCTCTaGCACAGGGTCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILQGPVL*HRVRVS
Trigger: AGAGACCCTGACCCTGTGGCAGAGCACAGGGCCCTG...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCGCGGCCTGTGGTCACTaGCAACTCCTGCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAAACGH*QLLPAR
Trigger: CCTGGCTGGCAGGAGTTGGCAGTGACCACAGGCCGC...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGTCCCCGTCGCACAGCTaGTGGGGCTCCACGCAGACC +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGSPSHS*WGSTQT
Trigger: GGTCTGCGTGGAGCCCCAGCAGCTGTGCGACGGGGA...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGCCAGGAGGCAGCGGCTaGAGGGTGGACACCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRPGGSG*RVDTSE
Trigger: CTCGGAGGTGTCCACCCTGCAGCCGCTGCCTCCTGG...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGTCCCCGCAGGCAAGATaGCCCTGCTTGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWSPQAR*PCLQES
Trigger: GGATTCCTGCAAGCAGGGGCATCTTGCCTGCGGGGA...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTTGCCCCCAGGCCCGCTaGAGAGACAGGAAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPCPQAR*RDRKCP
Trigger: TGGGCACTTCCTGTCTCTGCAGCGGGCCTGGGGGCA...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGGCAGGGTGCCTGGGCTaGGGAGGCTCCCGTGGTACC +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTAGCLG*GGSRGT
Trigger: GGTACCACGGGAGCCTCCGCAGCCCAGGCACCCTGC...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGGGAGTGTGCCACGCCTaGGGCCACTGCCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEGVCHA*GHCLKH
Trigger: GTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCC...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGTGGCCTGCCTCTGTaGCCAGGGTGTGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPESGLPL*PGCGPQ
Trigger: CTGTGGACCACACCCTGGGCACAGAGGCAGGCCACT...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp TGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGTCTACGGATCACAGTGGCCTGCCTCTGTaGCCAGGGTGTGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: CWMSREEAGPCLGWSTDHSGLPL*PGCGPQ
Trigger: CTGTGGACCACACCCTGGGCACAGAGGCAGGCCACT...GTGATCCGTAGACCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGCTCAGGGCCTGCCATaGCAGCTCCCGGGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGAQGLP*QLPGAV
Trigger: AACGGCTCCCGGGAGCTGGCATGGCAGGCCCTGAGC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR GCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTCCACCCCAGCTCCCTaGTGGTCAGGGCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISSTPAP*WSGPSK
Trigger: CTTGGATGGCCCTGACCAGCAGGGAGCTGGGGTGGA...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCTGCTGCCCCCGTTaGCCAGGCACCCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTPCCPR*PGTHWP
Trigger: GGGCCAATGGGTGCCTGGGCAACGGGGGCAGCAGGG...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCGGACAGAGGCATGGTTaGGCCAGAGGGAGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISGQRHG*ARGSSA
Trigger: CGCACTGCTCCCTCTGGCCCAACCATGCCTCTGTCC...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGAAGGCGGGCAGCAGGTaGCTGGACAGAGGCATGGTT +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWKAGSR*LDRGMV
Trigger: AACCATGCCTCTGTCCAGCCACCTGCTGCCCGCCTT...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCAGCGCAGGGCTGCGGTaGATGCCTCTTTCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETSAGLR*MPLSLG
Trigger: ACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCT...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGTGCCTCTCGCAGGGTTaGCGAGCGCAGGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGCLSQG*RAQGCG
Trigger: ACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCA...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCCCGGATGCGGCCTGTaGTCACTGCCAACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAPGCGL*SLPTPA
Trigger: GGCAGGAGTTGGCAGTGACCACAGGCCGCATCCGGG...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTTCCGAGCGGTTCCATaGGCCCAGGCCTGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: QHRAGNAQASAYPETCSLFRAVP*AQACLK
Trigger: TTTGAGACAGGCCTGGGCCCATGGAACCGCTCGGAA...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGGGACCACCAGCGCGGTaGTTCCGGGACCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRGPPAR*FRDQPS
Trigger: GGAAGGCTGGTCCCGGAACCACCGCGCTGGTGGTCC...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGAGACCAGCGAGCAGTTaGAGGTGCCTGAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RAGNAQASAYPETCSLSQRPASS*RCLRLG
Trigger: TCCAAGCCTCAGGCACCTCCAACTGCTCGCTGGTCT...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGTCTGCAGGAACAGCTaGAGGCAGCCAGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSVCRNS*RQPASD
Trigger: GTCTGAGGCTGGCTGCCTCCAGCTGTTCCTGCAGAC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTGCTTGCAGGAATCCTaGAGCCGCGAGCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQACLQES*SRELGG
Trigger: GCCGCCCAGCTCGCGGCTCCAGGATTCCTGCAAGCA...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGACCCCTGGCTCTCCTaGGCTGAGACACGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRDPWLS*AETRRH
Trigger: GTGGCGGCGTGTCTCAGCCCAGGAGAGCCAGGGGTC...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGCCTTGGCCTGTGGTGTaGTCGTGGTCAGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRPWPVV*SWSGPR
Trigger: CCGCGGCCCTGACCACGACCACACCACAGGCCAAGG...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCAGGCCAGGGGGTCTGTaGGGTCCAGGAGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSRPGGL*GPGAQS
Trigger: ACTTTGTGCTCCTGGACCCCACAGACCCCCTGGCCT...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAGACCCGCAGGGTGCCTaGGCTGCGGAGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGREDPQGA*AAEAPV
Trigger: CACGGGAGCCTCCGCAGCCCAGGCACCCTGCGGGTC...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCCTGAGGCTGAGCACCTaGTGCCTCCCGCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSLRLST*CLPRSS
Trigger: GGAGGAGCGCGGGAGGCACCAGGTGCTCAGCCTCAG...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCAGGCAAGCCCGCCGTaGGCACTGAGGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRQASPP*ALRLST
Trigger: GGTGCTCAGCCTCAGTGCCCACGGCGGGCTTGCCTG...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGTCTGTGCCCAGGGTGTaGTCCACAGGGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRSVPRV*STGGWG
Trigger: CCCCCAGCCCCCTGTGGACCACACCCTGGGCACAGA...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCACAGCTGGCACAGACCCGGGTGCGGCTGTGTTCCCTGTGGGCCATAGGGACATCAAAGAAGGCAAAGTaGCCTGCCTCTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PQLAQTRVRLCSLWAIGTSKKAK*PASVPR
Trigger: CCTGGGCACAGAGGCAGGCCACTTTGCCTTCTTTGA...TGTCCCTATGGCCCACAGGGAACACAGCCGCACCCGGGTCTGTGCCAGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GTGCTGCCCCACGGCCCAAGCCCTGGGCACCACGACTACGAAGGGAAAGGGCTACGATCTGGAACTCCTTaGCACTGGCTACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: VLPHGPSPGHHDYEGKGLRSGTP*HWLPPP
Trigger: AGGTGGAGGTAGCCAGTGCCAAGGAGTTCCAGATCG...TAGCCCTTTCCCTTCGTAGTCGTGGTGCCCAGGGCTTGGGCCGTGGGGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GACTCACAGAAGTGCTCAGGAAAACCCATGTGGTACCAGAAGCGGAGGCAGGAGGGCCCCAGGGCTGGCTaGCCGCCCAGAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: DSQKCSGKPMWYQKRRQEGPRAG*PPRVAS
Trigger: TGAAGCCACTCTGGGCGGCCAGCCAGCCCTGGGGCC...CTCCTGCCTCCGCTTCTGGTACCACATGGGTTTTCCTGAGCACTTCTGTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp CCACAGCTGGCACAGACCCGGGTGCGGCTGTGTTCCCTGTGGGCCATAGGGACAGGTCTGACCAAGTGCTaGATGTCACGTGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PQLAQTRVRLCSLWAIGTGLTKC*MSREEA
Trigger: CGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC...TGTCCCTATGGCCCACAGGGAACACAGCCGCACCCGGGTCTGTGCCAGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGTCTCGGTGGTCACTGTaGGGCTACAGTCCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWSRWSL*GYSPSG
Trigger: CCCTGAGGGACTGTAGCCCCACAGTGACCACCGAGA...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR CCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCCTCTGTCTCTCTCGGTaGTCACTGTGGGGCTACAGT +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGLCLSR*SLWGYS
Trigger: ACTGTAGCCCCACAGTGACCACCGAGAGAGACAGAG...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGGGAACCTGCAGGACATaGGTGGGTGAGTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWGTCRT*VGEWCC
Trigger: GCAGCACCACTCACCCACCCATGTCCTGCAGGTTCC...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCGGATGGACCTTGCCCTaGGTGTGGGCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETGWTLP*VWAQGA
Trigger: TGCTCCCTGTGCCCACACCCAGGGCAAGGTCCATCC...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGAGCCAGCTGTAGCCTaGGGTACTAATGTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSEPAVA*GTNVPP
Trigger: TGGCGGGACATTAGTACCTCAGGCTACAGCTGGCTC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCGCCCAGTGTGTGGTCTaGGTGAGGCCCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSAQCVV*VRPRTL
Trigger: GAGGGTCCTGGGCCTCACTCAGACCACACACTGGGC...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCGTTGCCCTGGGTGCCTaGCCGCGACCACAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSVALGA*PRPQVC
Trigger: ACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAAC...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR TCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACTCACAGGAACCTGGCTaGGGGCAGGGCCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNSQEPG*GQGPSW
Trigger: CCAGGACGGGCCCTGCCCTCAGCCAGGTTCCTGTGA...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCAGCACCAGGAGCATaGGCAATAGGAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAAAPGA*AIGGHC
Trigger: GCAGTGCCCTCCTATTGCTCATGCTCCTGGTGCTGC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR TCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCGTGCTGGATGTCACGTaGGGAAGCGGGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETVLDVT*GSGALS
Trigger: AGACAAGGCCCCGCTTCCTCACGTGACATCCAGCAC...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR TCA 90 bp TGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGTCTACGGATCACGGCCTCAGCATATCCTaGGACCTGCAGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: CWMSREEAGPCLGWSTDHGLSIS*DLQPVP
Trigger: TGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCC...GTGATCCGTAGACCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCAGGGCTGCGGTGGATaGCTCTTTCCCTCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAQGCGG*LFPSVG
Trigger: ACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTG...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCAGGGCCCTGTGCTCTaGCACAGGGTCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAQGPVL*HRVRVS
Trigger: AGAGACCCTGACCCTGTGGCAGAGCACAGGGCCCTG...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCAAGATGCCCCTGCTTaGAGGAATCCTGGAGCCGCG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISQDAPA*RNPGAA
Trigger: CGCGGCTCCAGGATTCCTGCAAGCAGGGGCATCTTG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCAGGCAAGATGCCCCTaGTTGCAGGAATCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSQARCP*LQESWS
Trigger: GCTCCAGGATTCCTGCAAGCAGGGGCATCTTGCCTG...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCTCGTCCTCGCCCCCTaGGCACTGCTCCTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRLVLAP*ALLLEV
Trigger: GACTTCGAGGAGCAGTGCGCAGGGGGCGAGGACGAG...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGACACTCCGTGGGTGCTaGTGGCACCTGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGTLRGC*WHLGPG
Trigger: TCCAGGCCCCAGGTGCCAGCAGCACCCACGGAGTGT...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCGAGGCATTGGCCTaGCGCCTCCAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRPEALA*RLQRPW
Trigger: CCAAGGTCTCTGGAGGCGGCAGGCCAATGCCTCGGG...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GACTCACAGAAGTGCTCAGGAAAACCCATGTGGTACCAGAAGCGGAGGCAGGAGCCTGCACGTCCATGCTaGCCAGGCGCCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: DSQKCSGKPMWYQKRRQEPARPC*PGARQA
Trigger: GGCTTGCCTGGCGCCTGGGCAGCATGGACGTGCAGG...CTCCTGCCTCCGCTTCTGGTACCACATGGGTTTTCCTGAGCACTTCTGTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGAGCCACGTAGGAGTGTaGCACGCCTGCGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRSHVGV*HACGHC
Trigger: GCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCT...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGAAGGCAAAGTGGCCTaGCTCTGTGCCCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAEGKVA*LCAQGV
Trigger: CACACCCTGGGCACAGAGGCAGGCCACTTTGCCTTC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGGCTGCTGGCAATGCTaGCCAGCCAGATACTCCACG +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAGCWQC*PARYST
Trigger: CGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGCC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCGCAGGCTGCTGGCAATaGTGCCCAGCCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISAGCWQ*CPARYS
Trigger: GGAGTATCTGGCTGGGCAGCATTGCCAGCAGCCTGC...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCAGCTCCCCTTCTTCTaGAGCCAGCGCCGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRQLPFF*SQRRPP
Trigger: TGGGGGACGGCGCTGGCTGCAGAAGAAGGGGAGCTG...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGATGCCTGCACTGCTaGTCAGGGCCTGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPERCLHC*SGPAMP
Trigger: TGGCATGGCAGGCCCTGAGCAGCAGTGCAGGCATCT...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR GCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCCACCTTCCAGATGCCTaGACTGCTGCTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETHLPDA*TAAQGL
Trigger: CAGGCCCTGAGCAGCAGTGCAGGCATCTGGAAGGTG...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGCCACACAGGGTGCCTaGGAAGTTCCGTGCGGTTAT +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSATQGA*EVPCGY
Trigger: ATAACCGCACGGAACTTCCCAGGCACCCTGTGTGGC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317446.7
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAAGCGCAGGGCTGCGGTaGATGCCTCTTTCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRSAGLR*MPLSLG
Trigger: ACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCT...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTAGGGTCTCTGCGCCATaGGTCAGCTCCACCCGCAGT +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPRVSAP*VSSTRS
Trigger: ACTGCGGGTGGAGCTGACCCATGGCGCAGAGACCCT...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCGGATGCGGCCTGTaGTCACTGCCAACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRPGCGL*SLPTPA
Trigger: GGCAGGAGTTGGCAGTGACCACAGGCCGCATCCGGG...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGAGGTGCCTGAGGCTTaGAATTCGGGGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSEVPEA*NSGLES
Trigger: ACTCTCCAGCCCCGAATTCCAAGCCTCAGGCACCTC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCTGTGGTGTGGTCGTaGTCAGGGCCGCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTPVVWS*SGPRLS
Trigger: GGAGAGCCGCGGCCCTGACCACGACCACACCACAGG...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGAGCACAAAGTGGCCTTaGCCTGTGGTGTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWSTKWP*PVVWSW
Trigger: CCACGACCACACCACAGGCCAAGGCCACTTTGTGCT...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCCCCTTCCCGTCTCATaGCTAGGCGCAGAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISPLPVS*LGAESQ
Trigger: TTGGGACTCTGCGCCTAGCCATGAGACGGGAAGGGG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACAGCGCCATGGTGCCGTaGTATCCGTCCCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNSAMVP*YPSRRP
Trigger: GGGCCTCCGGGACGGATACCACGGCACCATGGCGCT...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCGCCTCCAGAGACCTTaGCCTCCAGGGGAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRRLQRP*PPGEKP
Trigger: CGGCTTCTCCCCTGGAGGCCAAGGTCTCTGGAGGCG...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGCATGGCCCGAGGCATTaGCCTGCCGCCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRHGPRH*PAASRD
Trigger: GTCTCTGGAGGCGGCAGGCCAATGCCTCGGGCCATG...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCAGTGGTATGGTCTGTTaGGGGGCCCCAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISSGMVC*GAPGSM
Trigger: CATGCTGCCTGGGGCCCCCCAACAGACCATACCACT...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGCGGAGGCTCCCGTaGTACCAGAAGGTCAGACAA +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSLRRLP*YQKVRQ
Trigger: TTGTCTGACCTTCTGGTACCACGGGAGCCTCCGCAG...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACCTGAGGCTGAGCACCTaGTGCCTCCCGCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNLRLST*CLPRSS
Trigger: GGAGGAGCGCGGGAGGCACCAGGTGCTCAGCCTCAG...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCAAAATCACAGGAACCTaGCTGAGGGCAGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSKITGT*LRAGPV
Trigger: GACGGGCCCTGCCCTCAGCCAGGTTCCTGTGATTTT...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGCCTGGGCTCAGGAAAACCCATGTaGTACCAGAAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GTPRPQHILRPAACPSLGSGKPM*YQKRRQ
Trigger: CTGCCTCCGCTTCTGGTACCACATGGGTTTTCCTGA...GCCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGCTGGCCGCCCAGAGTaGCTTCAAACACGATCTGGA +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSAGRPE*LQTRSG
Trigger: TCCAGATCGTGTTTGAAGCCACTCTGGGCGGCCAGC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAAATGGGCCCCAGGGCTaGCTGGCCGCCCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGRENGPQG*LAAQSG
Trigger: GCCACTCTGGGCGGCCAGCCAGCCCTGGGGCCCATT...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGCTGTGTTCCCCGGGCTaGGGGCAGGCTGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRLCSPG*GQAAGN
Trigger: ATTGCCAGCAGCCTGCCCCCAGCCCGGGGAACACAG...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGCAGGTGTCCGGTCCCTaGCTAGGGTCTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEQVSGP*LGSDQV
Trigger: CACTTGGTCAGACCCTAGCCAGGGACCGGACACCTG...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCATGCTCGCAGCTCCTaGGACCACACACTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSHARSS*DHTLVS
Trigger: GCTTACCAGTGTGTGGTCCCAGGAGCTGCGAGCATG...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCTGCTACCACAAGGATaGGGCCTGGCAGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILLLPQG*GLADRQ
Trigger: CTGCCTGTCTGCCAGGCCCCATCCTTGTGGTAGCAG...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGCGCCAGTGTGTGTCTaGGAGGTGGCCTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRAPVCV*EVAWVP
Trigger: TGGTACCCAGGCCACCTCTCAGACACACACTGGCGC...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGGTGGTACCAGAAGCTaGGACACTCCGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPGGTRS*DTPWVL
Trigger: CAGCACCCACGGAGTGTCTCAGCTTCTGGTACCACC...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGTTGCCCTGGGTGCCTaGCCGCGACCACAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNVALGA*PRPQVC
Trigger: ACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAAC...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR TCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCATCCCTGGCTAGGGTCTaGCCAAGTGCTGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPASLARV*PSAGCH
Trigger: GTGACATCCAGCACTTGGTCAGACCCTAGCCAGGGA...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGTGCGGCCACACAGGGTaGCTGGGAAGTTCCGTGCGG +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTCGHTG*LGSSVR
Trigger: CCGCACGGAACTTCCCAGGCACCCTGTGTGGCCGCA...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317446.7
CDS-3UTR GCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCAGCCGCAGGGGTCCTaGTCGAAGTCACAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRQPQGS*SKSQAK
Trigger: CTTCGCCTGTGACTTCGAGCAGGACCCCTGCGGCTG...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCCAGGCAAGATGCCCCTaGTTGCAGGAATCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETQARCP*LQESWS
Trigger: GCTCCAGGATTCCTGCAAGCAGGGGCATCTTGCCTG...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCTCGTCCTCGCCCCCTaGGCACTGCTCCTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTLVLAP*ALLLEV
Trigger: GACTTCGAGGAGCAGTGCGCAGGGGGCGAGGACGAG...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGGGCCTGGGTACCAGCTaGATGTGTCCCGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILGLGTS*MCPAQS
Trigger: ACTTTGAGCGGGACACATGCAGCTGGTACCCAGGCC...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACAGCGGTTGCCCTGGGTaGCTGACCGCGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNSGCPG*LTATTG
Trigger: ACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCT...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACCGTCCAGCGCCATGGTaGCGTGGTATCCGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNRPAPW*RGIRPG
Trigger: TCCGGGACGGATACCACGGCACCATGGCGCTGGACG...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCGAGGCATTGGCCTaGCGCCTCCAGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTPEALA*RLQRPW
Trigger: CCAAGGTCTCTGGAGGCGGCAGGCCAATGCCTCGGG...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGAGTGTGCCACGCCTaGGGCCACTGCCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRGVCHA*GHCLKH
Trigger: GTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCC...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGAGCCACGTAGGAGTGTaGCACGCCTGCGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTSHVGV*HACGHC
Trigger: GCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCT...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGCAGGCTGCTGGCAATaGTGCCCAGCCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRAGCWQ*CPARYS
Trigger: GGAGTATCTGGCTGGGCAGCATTGCCAGCAGCCTGC...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCATATCCTGAGACCTaGAGCCTGTCCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPAYPET*SLSQPG
Trigger: CCCAGGCTGGGACAGGCTGCAGGTCTCAGGATATGC...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp ATCACTGGTGACAGATGCCGGGAGGGTGACACCATCCGCATTGAAAAGGATGTTCTCCTGGACCCCTGCTaGCCCCGTTGCCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: ITGDRCREGDTIRIEKDVLLDPC*PRCPGT
Trigger: GGTGCCTGGGCAACGGGGGCAGCAGGGGTCCAGGAG...AACATCCTTTTCAATGCGGATGGTGTCACCCTCCCGGCATCTGTCACCAGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCGAGGAAGCCTGGGGCTaGATGGTCCCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSEEAWG*MVPQPL
Trigger: CAGAGGCTGAGGGACCATGCAGCCCCAGGCTTCCTC...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCGGACAGAGGCATGGTTaGGCCAGAGGGAGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSGQRHG*ARGSSA
Trigger: CGCACTGCTCCCTCTGGCCCAACCATGCCTCTGTCC...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGGCTGGACAGAGGCATaGTTGGGCCAGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGGWTEA*LGQREQ
Trigger: CTGCTCCCTCTGGCCCAACCATGCCTCTGTCCAGCC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCAGGGTCTCTGCGCCATaGGTCAGCTCCACCCGCAGT +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSRVSAP*VSSTRS
Trigger: ACTGCGGGTGGAGCTGACCCATGGCGCAGAGACCCT...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGTTGTTCTGGCAGTGGTaGTGTCCCGGGGGACAGTTG +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPELFWQW*CPGGQL
Trigger: CAACTGTCCCCCGGGACACCACCACTGCCAGAACAA...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCACGCAGACCTTGTTCTaGCAGTGGTGGTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQATQTLF*QWWCPG
Trigger: CCCGGGACACCACCACTGCCAGAACAAGGTCTGCGT...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCCTGTCTCAAAGTCGGTaGCTATGTGGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETLSQSR*LCGGHR
Trigger: CCTGTGGCCGCCACATAGCCACCGACTTTGAGACAG...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCTGTCTCAAAGTCGGTaGCTATGTGGCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILLSQSR*LCGGHR
Trigger: CCTGTGGCCGCCACATAGCCACCGACTTTGAGACAG...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGTTCCGAGCGGTTCCATaGGCCCAGGCCTGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEFRAVP*AQACLK
Trigger: TTTGAGACAGGCCTGGGCCCATGGAACCGCTCGGAA...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCACTGTTCCGGCTGTaGTCACGGCGTGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNALFRL*SRRGQE
Trigger: CTCCTGGCCACGCCGTGACCACAGCCGGAACAGTGC...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCAGACCAGCGAGCAGTTaGAGGTGCCTGAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISRPASS*RCLRLG
Trigger: TCCAAGCCTCAGGCACCTCCAACTGCTCGCTGGTCT...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCGGACACCTCCGAGACTaGTCTGCAGTGGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETGHLRD*SAVVRQ
Trigger: CTGTCTGACCACTGCAGACCAGTCTCGGAGGTGTCC...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGGCTGCACTGGACCCCTaGCTCTCCTGGGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRAALDP*LSWAET
Trigger: TGTCTCAGCCCAGGAGAGCCAGGGGTCCAGTGCAGC...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTAGGCCAGGGGGTCTGTaGGGTCCAGGAGCACAAAGT +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPRPGGL*GPGAQS
Trigger: ACTTTGTGCTCCTGGACCCCACAGACCCCCTGGCCT...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCACCAATCTGGGGCCCATaGAGGTGGTACCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAPIWGP*RWYQKL
Trigger: CAGCTTCTGGTACCACCTCCATGGGCCCCAGATTGG...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCCCTTCCCGTCTCATaGCTAGGCGCAGAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRPLPVS*LGAESQ
Trigger: TTGGGACTCTGCGCCTAGCCATGAGACGGGAAGGGG...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAATGCCAGCGGTTGCCCTaGGTGCCTGACCGCGACCAC +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGRECQRLP*VPDRDH
Trigger: GTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCA...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCCCTCGAACAGCAGCTaGTACTGGGCATGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAPSNSS*YWAWEP
Trigger: TGGCTCCCATGCCCAGTACCAGCTGCTGTTCGAGGG...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGCTGCGGAGGCTCCCGTaGTACCAGAAGGTCAGACAA +
Preference number: 4 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILLRRLP*YQKVRQ
Trigger: TTGTCTGACCTTCTGGTACCACGGGAGCCTCCGCAG...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCTCAAAGAAGGCAAAGTaGCCTGCCTCTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSSKKAK*PASVPR
Trigger: CCTGGGCACAGAGGCAGGCCACTTTGCCTTCTTTGA...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCTCAGGAAAACCCATGTaGTACCAGAAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HRAGNAQASAYPETCSLSSGKPM*YQKRRQ
Trigger: CTGCCTCCGCTTCTGGTACCACATGGGTTTTCCTGA...GGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACCTGGCTACCTCCACCTaGGCCTCCAGCCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNLATST*ASSHWC
Trigger: GCACCAGTGGCTGGAGGCCCAGGTGGAGGTAGCCAG...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCCTCTGTGTTGCTCTaGAAGGGGCAGCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPASVLL*KGQLPF
Trigger: GAAGGGGAGCTGCCCCTTCCAGAGCAACACAGAGGC...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAAAGCGGGGCCTTGTCTaGGGTGGTCTACGGATCACT +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAKRGLV*GGLRIT
Trigger: AGTGATCCGTAGACCACCCCAGACAAGGCCCCGCTT...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAAGGGCTCACCCGGGCTaGGGGCAGGCTGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGRERAHPG*GQAAGN
Trigger: ATTGCCAGCAGCCTGCCCCCAGCCCGGGTGAGCCCT...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp TCAAAATCACAGGAACCTGCAGGACATGGGTGGGTGAGTGGTGCTGCCCCACGGCACAAGGATGGGGCCTaGCAGACAGGCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SKSQEPAGHGWVSGAAPRHKDGA*QTGSCC
Trigger: ACAGCAGCTGCCTGTCTGCCAGGCCCCATCCTTGTG...CCGTGGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAACACTGGGCCTCATCTaGGCAGTCCCTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRTLGLI*AVPAVT
Trigger: TGTGACTGCAGGGACTGCTCAGATGAGGCCCAGTGT...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGGTGGTACCAGAAGCTaGGACACTCCGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGGGTRS*DTPWVL
Trigger: CAGCACCCACGGAGTGTCTCAGCTTCTGGTACCACC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGGAGAAGCCGCAGTCTaGGTCCTCAAAGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAGEAAV*VLKGAV
Trigger: TACTGCTCCTTTGAGGACTCAGACTGCGGCTTCTCC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR TCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGGCAGCACCAGGAGCATaGGCAATAGGAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRAAPGA*AIGGHC
Trigger: GCAGTGCCCTCCTATTGCTCATGCTCCTGGTGCTGC...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGAGTCACACACGAAGTTaGACACGGCCTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRSHTRS*TRPGQG
Trigger: GCCCTGGCCAGGCCGTGTGCAACTTCGTGTGTGACT...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCCTTGCAAGAGGAGGCTaGCTCTCGCAGGGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSLARGG*LSQGWR
Trigger: TCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAG...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGTCCCCGCAGGCAAGATaGCCCTGCTTGCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRSPQAR*PCLQES
Trigger: GGATTCCTGCAAGCAGGGGCATCTTGCCTGCGGGGA...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGTCGCCCCCTGCGCACTaGTCCTCGAAGTCACACAGT +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRSPPAH*SSKSHS
Trigger: ACTGTGTGACTTCGAGGAGCAGTGCGCAGGGGGCGA...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCACTCAAAGTCTGTGGTaGCACAGGCCTGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QQSQHRAGNAQASAYPETTQSLW*HRPARP
Trigger: AGGACGAGCAGGCCTGTGGCACCACAGACTTTGAGT...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAAGCCACGTAGGAGTGTaGCACGCCTGCGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGRESHVGV*HACGHC
Trigger: GCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCT...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGGCTGCTGGCAATGCTaGCCAGCCAGATACTCCACG +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGGCWQC*PARYST
Trigger: CGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGCC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp TCAAAATCACAGGAACCTGCAGGACATGGGTGGGTGAGTGGTGCTGCCCCACGGGCAATAGGAGGGCACTaGCAACCACAGCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SKSQEPAGHGWVSGAAPRAIGGH*QPQLAQ
Trigger: CTGTGCCAGCTGTGGTTGGCAGTGCCCTCCTATTGC...CCGTGGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp ATCACTGGTGACAGATGCCGGGAGGGTGACACCATCCGCATTGAAAAGGATGTTGTGGGTGAGTGGTGCTaGCCCACGGCCCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ITGDRCREGDTIRIEKDVVGEWC*PTAQAL
Trigger: CAGGGCTTGGGCCGTGGGGCAGCACCACTCACCCAC...AACATCCTTTTCAATGCGGATGGTGTCACCCTCCCGGCATCTGTCACCAGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCAGAGGGTATTGGTTCTaGTACCACAAGGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: SQHRAGNAQASAYPETCSRGYWF*YHKDGA
Trigger: GGCCCCATCCTTGTGGTAGCAGAACCAATACCCTCT...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGTCTCCAGAGGCCGCGTaGTACCAGAGCCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRSPEAA*YQSLSL
Trigger: CAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGA...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGGGTGGCATTTCGGGTaGCAGAGAAGGTCACTCGGA +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRGWHFG*QRRSLG
Trigger: TCCGAGTGACCTTCTCTGCCACCCGAAATGCCACCC...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGACCTTGTTCTGGCAGTaGTGGTGTCCCGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRTLFWQ*WCPGGQ
Trigger: CTGTCCCCCGGGACACCACCACTGCCAGAACAAGGT...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGACGCAGACCTTGTTCTaGCAGTGGTGGTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRTQTLF*QWWCPG
Trigger: CCCGGGACACCACCACTGCCAGAACAAGGTCTGCGT...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGAAGTCGGTGGCTATGTaGCGGCCACAGGTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRKSVAM*RPQVSG
Trigger: CCCACTCACCTGTGGCCGCCACATAGCCACCGACTT...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGGAGACTGGTCTGCAGTaGTCAGACAGGATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEETGLQ*SDRMRS
Trigger: CGACCTCATCCTGTCTGACCACTGCAGACCAGTCTC...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGGACACCTCCGAGACTaGTCTGCAGTGGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRGHLRD*SAVVRQ
Trigger: CTGTCTGACCACTGCAGACCAGTCTCGGAGGTGTCC...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGGGACTCAAAGTCTGTaGTGCCACAGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRGTQSL*CHRPAR
Trigger: ACGAGCAGGCCTGTGGCACCACAGACTTTGAGTCCC...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGTGTGTGTCTGAGAGGTaGCCTGGGTACCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPECVSER*PGYQLH
Trigger: ATGCAGCTGGTACCCAGGCCACCTCTCAGACACACA...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCCAGGAGCACAAAGTaGCCTTGGCCTGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQASRSTK*PWPVVW
Trigger: CCACACCACAGGCCAAGGCCACTTTGTGCTCCTGGA...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCCGCAGAGTCCCAATCTaGGGCCCATGGAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSRRVPI*GPWRWY
Trigger: GTACCACCTCCATGGGCCCCAGATTGGGACTCTGCG...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGCCCTCGAACAGCAGCTaGTACTGGGCATGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGPSNSS*YWAWEP
Trigger: TGGCTCCCATGCCCAGTACCAGCTGCTGTTCGAGGG...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCAGTGGTATGGTCTGTTaGGGGGCCCCAGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSSGMVC*GAPGSM
Trigger: CATGCTGCCTGGGGCCCCCCAACAGACCATACCACT...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTCTGCGGAGGCTCCCGTaGTACCAGAAGGTCAGACAA +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPLRRLP*YQKVRQ
Trigger: TTGTCTGACCTTCTGGTACCACGGGAGCCTCCGCAG...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGTCAGGAAAACCCATGTaGTACCAGAAGCGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWSGKPM*YQKRRQ
Trigger: CTGCCTCCGCTTCTGGTACCACATGGGTTTTCCTGA...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCGATCTGGAACTCCTTaGCACTGGCTACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISRSGTP*HWLPPP
Trigger: AGGTGGAGGTAGCCAGTGCCAAGGAGTTCCAGATCG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGCCTCTGTGTTGCTCTaGAAGGGGCAGCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGASVLL*KGQLPF
Trigger: GAAGGGGAGCTGCCCCTTCCAGAGCAACACAGAGGC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CTGGCCGCCCAGAGTGGCTTCAAACACGATCTGGAACTCCTTGGCACTGGCTACAAGCGGGGCCTTGTCTaGGGTGGTCTACGGATCACT +
Preference number: 4 (lower is better)
Translates to: LAAQSGFKHDLELLGTGYKRGLV*GGLRIT
Trigger: AGTGATCCGTAGACCACCCCAGACAAGGCCCCGCTT...GTAGCCAGTGCCAAGGAGTTCCAGATCGTGTTTGAAGCCACTCTGGGCGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCGCTAAGGAGGAAGCCTaGGGCTGCATGGTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSAKEEA*GCMVPQ
Trigger: CTGAGGGACCATGCAGCCCCAGGCTTCCTCCTTAGC...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCACACTGGGCCTCATCTaGGCAGTCCCTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSTLGLI*AVPAVT
Trigger: TGTGACTGCAGGGACTGCTCAGATGAGGCCCAGTGT...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGAGCCAGCTGTAGCCTaGGGTACTAATGTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGEPAVA*GTNVPP
Trigger: TGGCGGGACATTAGTACCTCAGGCTACAGCTGGCTC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGAGTGGTCAGACAGGATaGGGTCGTCCAGACCCACGA +
Preference number: 4 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRSGQTG*GRPDPR
Trigger: TCGTGGGTCTGGACGACCTCATCCTGTCTGACCACT...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGAGTGGTCAGACAGGATaGGGTCGTCCAGACCCACGA +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRSGQTG*GRPDPR
Trigger: TCGTGGGTCTGGACGACCTCATCCTGTCTGACCACT...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAGCGCCAGTGTGTGTCTaGGAGGTGGCCTGGGTACCA +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGREAPVCV*EVAWVP
Trigger: TGGTACCCAGGCCACCTCTCAGACACACACTGGCGC...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGTGCTGGATGTCACGTaGGGAAGCGGGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNVLDVT*GSGALS
Trigger: AGACAAGGCCCCGCTTCCTCACGTGACATCCAGCAC...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCATCTGAGCAGTCCCTaGAGTCACACACGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: HRATESAQGRERPGLSISHLSSP*SHTRSC
Trigger: GCAACTTCGTGTGTGACTGCAGGGACTGCTCAGATG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCACCAGCCCAAGTCGGTaGCCAGTGTGTGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSTSPSR*PVCGLS
Trigger: ACTCAGACCACACACTGGGCACCGACTTGGGCTGGT...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACAGGGCTGCGGTGGATaGCTCTTTCCCTCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGREQGCGG*LFPSVG
Trigger: ACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTG...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGACCAGAGCCTCAGCTTaGAAGAGGAGGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRTRASA*KRRLPL
Trigger: GAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGT...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACAGGGTCAGGGTCTCTaGGCCATGGGTCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGREQGQGL*AMGQLH
Trigger: GTGGAGCTGACCCATGGCGCAGAGACCCTGACCCTG...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACCAGGAAGGAGCCCTGTaGACTGTTCCGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNQEGAL*TVPAVV
Trigger: GACCACAGCCGGAACAGTGCACAGGGCTCCTTCCTG...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCTGCAGAGACAGGAAGTaGCCAGCAGCAGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: FIHRATESAQGRERPGLSCRDRK*PAAAAL
Trigger: CAGTGCAGCTGCTGCTGGGCACTTCCTGTCTCTGCA...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGCCTGGGTACCAGCTaGATGTGTCCCGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRGLGTS*MCPAQS
Trigger: ACTTTGAGCGGGACACATGCAGCTGGTACCCAGGCC...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGAAGGCAAAGTGGCCTaGCTCTGTGCCCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNEGKVA*LCAQGV
Trigger: CACACCCTGGGCACAGAGGCAGGCCACTTTGCCTTC...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGGGCTGCTGGCAATGCTaGCCAGCCAGATACTCCACG +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTGCWQC*PARYST
Trigger: CGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGCC...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CTGGCCGCCCAGAGTGGCTTCAAACACGATCTGGAACTCCTTGGCACTGGCTACATCACTGGTGACAGATaGCGGGAGGGTGACACCATC +
Preference number: 4 (lower is better)
Translates to: LAAQSGFKHDLELLGTGYITGDR*REGDTI
Trigger: GATGGTGTCACCCTCCCGGCATCTGTCACCAGTGAT...GTAGCCAGTGCCAAGGAGTTCCAGATCGTGTTTGAAGCCACTCTGGGCGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGTGTCCACCTTCCAGATaGCTGCACTGCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGCPPSR*LHCCSG
Trigger: CCCTGAGCAGCAGTGCAGGCATCTGGAAGGTGGACA...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR GCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGCAGGCAGCTGCTGTCTaGAGACTTGGTGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRQAAAV*RLGGAH
Trigger: ATGAGCCCCACCAAGTCTGCAGACAGCAGCTGCCTG...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCGAGACTGGTCTGCAGTaGTCAGACAGGATGAGGTCG +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAETGLQ*SDRMRS
Trigger: CGACCTCATCCTGTCTGACCACTGCAGACCAGTCTC...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGCCAATCTGGGGCCCATaGAGGTGGTACCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGPIWGP*RWYQKL
Trigger: CAGCTTCTGGTACCACCTCCATGGGCCCCAGATTGG...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCGCAGAGTCCCAATCTaGGGCCCATGGAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTRRVPI*GPWRWY
Trigger: GTACCACCTCCATGGGCCCCAGATTGGGACTCTGCG...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAAATCACAGGAACCTaGCTGAGGGCAGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGKITGT*LRAGPV
Trigger: GACGGGCCCTGCCCTCAGCCAGGTTCCTGTGATTTT...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCGATCTGGAACTCCTTaGCACTGGCTACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQARSGTP*HWLPPP
Trigger: AGGTGGAGGTAGCCAGTGCCAAGGAGTTCCAGATCG...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGGTCTGACCAAGTGCTaGATGTCACGTGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPGLTKC*MSREEA
Trigger: CGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp GCCTCTGCTGGCTCCTGGGGTTCACCCCTATTTCAAAGGCAGAGGGTATTGGTTCAGGTGTCCGGTCCCTaGCTAGGGTCTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: ASAGSWGSPLFQRQRVLVQVSGP*LGSDQV
Trigger: CACTTGGTCAGACCCTAGCCAGGGACCGGACACCTG...AACCAATACCCTCTGCCTTTGAAATAGGGGTGAACCCCAGGAGCCAGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp AGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAGCCTCTGCTGGCTCCTaGGGTTCACCCCTATTTCAA +
Preference number: 4 (lower is better)
Translates to: SNRVSTGQGTPRPQHILRASAGS*GSPLFQ
Trigger: TTGAAATAGGGGTGAACCCCAGGAGCCAGCAGAGGC...TCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR TCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACTGTGGCGGCCACAGGTaGGTGGGTTCTCATCAGACA +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNCGGHR*VGSHQT
Trigger: TGTCTGATGAGAACCCACTCACCTGTGGCCGCCACA...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR TCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACTCCCTGGCTAGGGTCTaGCCAAGTGCTGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNSLARV*PSAGCH
Trigger: GTGACATCCAGCACTTGGTCAGACCCTAGCCAGGGA...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGTGCAGAGACAGGAAGTaGCCAGCAGCAGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTCRDRK*PAAAAL
Trigger: CAGTGCAGCTGCTGCTGGGCACTTCCTGTCTCTGCA...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAGAAGGCAAAGTGGCCTaGCTCTGTGCCCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGREEGKVA*LCAQGV
Trigger: CACACCCTGGGCACAGAGGCAGGCCACTTTGCCTTC...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp TGCTGGCTCCTGGGGTTCACCCCTATTTCAAAGGCAGAGGGTATTGGTTCTGCTGCAGGCTGCTGGCAATaGTGCCCAGCCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: CWLLGFTPISKAEGIGSAAGCWQ*CPARYS
Trigger: GGAGTATCTGGCTGGGCAGCATTGCCAGCAGCCTGC...AGCAGAACCAATACCCTCTGCCTTTGAAATAGGGGTGAACCCCAGGAGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAAAGGCGGGCAGCAGGTaGCTGGACAGAGGCATGGTT +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGREKAGSR*LDRGMV
Trigger: AACCATGCCTCTGTCCAGCCACCTGCTGCCCGCCTT...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACTTGTTCTGGCAGTGGTaGTGTCCCGGGGGACAGTTG +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNLFWQW*CPGGQL
Trigger: CAACTGTCCCCCGGGACACCACCACTGCCAGAACAA...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGAGGTGCCTGAGGCTTaGAATTCGGGGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNEVPEA*NSGLES
Trigger: ACTCTCCAGCCCCGAATTCCAAGCCTCAGGCACCTC...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGTGTGTGTCTGAGAGGTaGCCTGGGTACCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRCVSER*PGYQLH
Trigger: ATGCAGCTGGTACCCAGGCCACCTCTCAGACACACA...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCAATCTGGGGCCCATaGAGGTGGTACCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTPIWGP*RWYQKL
Trigger: CAGCTTCTGGTACCACCTCCATGGGCCCCAGATTGG...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGTCAAAGAAGGCAAAGTaGCCTGCCTCTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGSKKAK*PASVPR
Trigger: CCTGGGCACAGAGGCAGGCCACTTTGCCTTCTTTGA...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGGCTGGCCGCCCAGAGTaGCTTCAAACACGATCTGGA +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTAGRPE*LQTRSG
Trigger: TCCAGATCGTGTTTGAAGCCACTCTGGGCGGCCAGC...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGAAGCGGGGCCTTGTCTaGGGTGGTCTACGGATCACT +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTKRGLV*GGLRIT
Trigger: AGTGATCCGTAGACCACCCCAGACAAGGCCCCGCTT...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGGTCTGACCAAGTGCTaGATGTCACGTGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGGLTKC*MSREEA
Trigger: CGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CCA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGACTTGGTGGGGCTCATaGCCCCAGGCGAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: PSWARVFIHRATESAQGRTWWGS*PQARFF
Trigger: AAAGAATCTCGCCTGGGGCCATGAGCCCCACCAAGT...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGACTCAAAGTCTGTGGTaGCACAGGCCTGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTTQSLW*HRPARP
Trigger: AGGACGAGCAGGCCTGTGGCACCACAGACTTTGAGT...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGATCACTGGTGACAGATaGCGGGAGGGTGACACCATC +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTITGDR*REGDTI
Trigger: GATGGTGTCACCCTCCCGGCATCTGTCACCAGTGAT...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACATCACTGGTGACAGATaGCGGGAGGGTGACACCATC +
Preference number: 4 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNITGDR*REGDTI
Trigger: GATGGTGTCACCCTCCCGGCATCTGTCACCAGTGAT...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR GCA 90 bp AGACTCAAAATCACAGGAACCTGCAGGACATGGGTGGGTGAGTGGTGCTGCCCCCCGGACTCACAGAAGTaGTCAGGAAAACCCATGTGG +
Preference number: 4 (lower is better)
Translates to: RLKITGTCRTWVGEWCCPPDSQK*SGKPMW
Trigger: CCACATGGGTTTTCCTGAGCACTTCTGTGAGTCCGG...GGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGAGTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAAGCACAAAGTGGCCTTaGCCTGTGGTGTGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGRESTKWP*PVVWSW
Trigger: CCACGACCACACCACAGGCCAAGGCCACTTTGTGCT...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAATCCAGGAGCACAAAGTaGCCTTGGCCTGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGRESRSTK*PWPVVW
Trigger: CCACACCACAGGCCAAGGCCACTTTGTGCTCCTGGA...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CCA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCTTCAAACACGATCTaGAACTCCTTGGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPASNTI*NSLALA
Trigger: AGCCAGTGCCAAGGAGTTCCAGATCGTGTTTGAAGC...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR TCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAGGAGAAGCCGCAGTCTaGGTCCTCAAAGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGREGEAAV*VLKGAV
Trigger: TACTGCTCCTTTGAGGACTCAGACTGCGGCTTCTCC...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR TCA 90 bp ATCACTGGTGACAGATGCCGGGAGGGTGACACCATCCGCATTGAAAAGGATGTTTCCCTGGCTAGGGTCTaGCCAAGTGCTGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: ITGDRCREGDTIRIEKDVSLARV*PSAGCH
Trigger: GTGACATCCAGCACTTGGTCAGACCCTAGCCAGGGA...AACATCCTTTTCAATGCGGATGGTGTCACCCTCCCGGCATCTGTCACCAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR GCA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCATCTGAGCAGTCCCTaGAGTCACACACGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTHLSSP*SHTRSC
Trigger: GCAACTTCGTGTGTGACTGCAGGGACTGCTCAGATG...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR GCA 90 bp AGACTCAAAATCACAGGAACCTGCAGGACATGGGTGGGTGAGTGGTGCTGCCCCAAAATCACAGGAACCTaGAGGACATGGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RLKITGTCRTWVGEWCCPKITGT*RTWVGE
Trigger: CTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTT...GGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGAAAGGCAGAGGGTATTaGTTCTGCTACCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEKGRGY*FCYHKD
Trigger: ATCCTTGTGGTAGCAGAACCAATACCCTCTGCCTTT...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp GCCTCTGCTGGCTCCTGGGGTTCACCCCTATTTCAAAGGCAGAGGGTATTGGTTGCTTCAAACACGATCTaGAACTCCTTGGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: ASAGSWGSPLFQRQRVLVASNTI*NSLALA
Trigger: AGCCAGTGCCAAGGAGTTCCAGATCGTGTTTGAAGC...AACCAATACCCTCTGCCTTTGAAATAGGGGTGAACCCCAGGAGCCAGCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CCA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAGCTTCAAACACGATCTaGAACTCCTTGGCACTGGCT +
Preference number: 4 (lower is better)
Translates to: SWARVFIHRATESAQGREASNTI*NSLALA
Trigger: AGCCAGTGCCAAGGAGTTCCAGATCGTGTTTGAAGC...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS CCA 90 bp GGGCCCAGCAGGGGCCCGGCCGCACGGCCACATCGTCCAGCGCCATaGTGCCGTGGTATCCGTCCCGGAGGCCCTCGAACAGCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: GPSRGPAARPHRPAP*CRGIRPGGPRTAAG
Trigger: ACCAGCTGCTGTTCGAGGGCCTCCGGGACGGATACCACGGCACCATGGCGCTGGACGATGTGGCCGTGCGGCCGGGCCCCTGCTGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 90 bp TCGGCCTGCACGTCCATGCTGCCCAGGCGCCAGGCAAGCCCGCCGTaGGCACTGAGGCTGAGCACCTGGTGCCTCCCGCGCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SACTSMLPRRQASPP*ALRLSTWCLPRSSR
Trigger: CCTGGAGGAGCGCGGGAGGCACCAGGTGCTCAGCCTCAGTGCCCACGGCGGGCTTGCCTGGCGCCTGGGCAGCATGGACGTGCAGGCCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 90 bp TGGTCACGGCGTGGCCAGGAGGGGCGCTCAGGACCACCAGCGCGGTaGTTCCGGGACCAGCCTTCCGAGCGGTTCCATGGGCCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: WSRRGQEGRSGPPAR*FRDQPSERFHGPRP
Trigger: AGGCCTGGGCCCATGGAACCGCTCGGAAGGCTGGTCCCGGAACCACCGCGCTGGTGGTCCTGAGCGCCCCTCCTGGCCACGCCGTGACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS GCA 90 bp CCCAGCAGGGGCCCGGCCGCACGGCCACATCGTCCAGCGCCATGGTaGCGTGGTATCCGTCCCGGAGGCCCTCGAACAGCAGCTGGTACT +
Preference number: 5 (lower is better)
Translates to: PSRGPAARPHRPAPW*RGIRPGGPRTAAGT
Trigger: AGTACCAGCTGCTGTTCGAGGGCCTCCGGGACGGATACCACGGCACCATGGCGCTGGACGATGTGGCCGTGCGGCCGGGCCCCTGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 90 bp GACAGGAAGTGCCCAGCAGCAGCTGCACTGGACCCCTGGCTCTCCTaGGCTGAGACACGCCGCCACTGCAGCCGCCCCACGCTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: DRKCPAAAALDPWLS*AETRRHCSRPTLAS
Trigger: GGACGCCAGCGTGGGGCGGCTGCAGTGGCGGCGTGTCTCAGCCCAGGAGAGCCAGGGGTCCAGTGCAGCTGCTGCTGGGCACTTCCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000481327.1
ENST00000485732.5
CDS CCA 90 bp CAGGGGCCCGGCCGCACGGCCACATCGTCCAGCGCCATGGTGCCGTaGTATCCGTCCCGGAGGCCCTCGAACAGCAGCTGGTACTGGGCA +
Preference number: 5 (lower is better)
Translates to: QGPGRTATSSSAMVP*YPSRRPSNSSWYWA
Trigger: TGCCCAGTACCAGCTGCTGTTCGAGGGCCTCCGGGACGGATACCACGGCACCATGGCGCTGGACGATGTGGCCGTGCGGCCGGGCCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS-3UTR CAA 90 bp GGCGGCCCGGCCCCCGGGGCCCAGCACGCCAGTTTCAAAGAAGGCAAAGTGGCCGCATGGCCCGAGGCATaGGCCTGCCGCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GGPAPGAQHASFKEGKVAAWPEA*ACRLQR
Trigger: TCTCTGGAGGCGGCAGGCCAATGCCTCGGGCCATGC...GGCCACTTTGCCTTCTTTGAAACTGGCGTGCTGGGCCCCGGGGGCCGGGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS GCA 90 bp CCGGGTGCGGCTGTGTTCCCCGGGCTGGGGGCAGGCTGCTGGCAATaGTGCCCAGCCAGATACTCCACGTCATCCAGGGCAATGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PGAAVFPGLGAGCWQ*CPARYSTSSRAMGP
Trigger: GGGGCCCATTGCCCTGGATGACGTGGAGTATCTGGCTGGGCAGCATTGCCAGCAGCCTGCCCCCAGCCCGGGGAACACAGCCGCACCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS GCA 90 bp AGGGCCGGCGGCGGGCCCCTAGAAGGACCTTGTCCACCTTCCAGATaGCTGCACTGCTGCTCAGGGCCTGCCATGCCAGCTCCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: RAGGGPLEGPCPPSR*LHCCSGPAMPAPGS
Trigger: GCTCCCGGGAGCTGGCATGGCAGGCCCTGAGCAGCAGTGCAGGCATCTGGAAGGTGGACAAGGTCCTTCTAGGGGCCCGCCGCCGGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS CCA 90 bp GACCAGGAAGGAGCCCTGTGCACTGTTCCGGCTGTGGTCACGGCGTaGCCAGGAGGGGCGCTCAGGACCACCAGCGCGGTGGTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: DQEGALCTVPAVVTA*PGGALRTTSAVVPG
Trigger: TCCCGGAACCACCGCGCTGGTGGTCCTGAGCGCCCCTCCTGGCCACGCCGTGACCACAGCCGGAACAGTGCACAGGGCTCCTTCCTGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CCA 90 bp GGCTGGTGGGAAAGGGTGGCCCAGGCCTCGTGCCAGCGGTTGCCCTaGGTGCCTGACCGCGACCACAGGTGTGTCTCCTCCCCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: GWWERVAQASCQRLP*VPDRDHRCVSSPSR
Trigger: ACGGGAAGGGGAGGAGACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGCCTGGGCCACCCTTTCCCACCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 90 bp GGCCTGGCCAGGGCTCCCAGGAACAGGACCAAGGCGGGCAGCAGGTaGCTGGACAGAGGCATGGTTGGGCCAGAGGGAGCAGTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: GLARAPRNRTKAGSR*LDRGMVGPEGAVRP
Trigger: TGGCCGCACTGCTCCCTCTGGCCCAACCATGCCTCTGTCCAGCCACCTGCTGCCCGCCTTGGTCCTGTTCCTGGGAGCCCTGGCCAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS TCA 90 bp GGAAAGGGTGGCCCAGGCCTCGTGCCAGCGGTTGCCCTGGGTGCCTaGCCGCGACCACAGGTGTGTCTCCTCCCCTTCCCGTCTCATGGC +
Preference number: 5 (lower is better)
Translates to: GKGGPGLVPAVALGA*PRPQVCLLPFPSHG
Trigger: GCCATGAGACGGGAAGGGGAGGAGACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGCCTGGGCCACCCTTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS GCA 90 bp GGTGGGAAAGGGTGGCCCAGGCCTCGTGCCAGCGGTTGCCCTGGGTaGCTGACCGCGACCACAGGTGTGTCTCCTCCCCTTCCCGTCTCA +
Preference number: 5 (lower is better)
Translates to: GGKGWPRPRASGCPG*LTATTGVSPPLPVS
Trigger: TGAGACGGGAAGGGGAGGAGACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGCCTGGGCCACCCTTTCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 90 bp GGGCTGCGGAGGCTCCCGTGGTACCAGAAGGTCAGACAAGCAGGCTaGGCCAGGGGCCTGTGCTCCTTGGAGGTCAGGGAGGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: GLRRLPWYQKVRQAG*ARGLCSLEVREAVW
Trigger: CCAGACGGCCTCCCTGACCTCCAAGGAGCACAGGCCCCTGGCCCAGCCTGCTTGTCTGACCTTCTGGTACCACGGGAGCCTCCGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 90 bp CCCCCACGAGCCTTGGGGGTCCAGGGTGCACCTCCAGAGGCCGCGTaGTACCAGAGCCTCAGCTTGCAAGAGGAGGCTGCCTCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: PPRALGVQGAPPEAA*YQSLSLQEEAASRR
Trigger: CCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGGTGCACCCTGGACCCCCAAGGCTCGTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS-3UTR CAA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGAGCCAGGCTGGCCCCTaGGGCCCTCCTCCGTGCCTC +
Preference number: 5 (lower is better)
Translates to: RAGNAQASAYPETCSLSQSQAGP*GPPPCL
Trigger: GAGGCACGGAGGAGGGCCCAAGGGGCCAGCCTGGCT...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS TCA 90 bp GAGACTTGCCCTGGCCTCACCCAAGTCGGTGCCCAGTGTGTGGTCTaGGTGAGGCCCAGGACCCTCCAGTGCGGCCCCTGCCCTGTCTCG +
Preference number: 5 (lower is better)
Translates to: ETCPGLTQVGAQCVV*VRPRTLQCGPCPVS
Trigger: CGAGACAGGGCAGGGGCCGCACTGGAGGGTCCTGGGCCTCACTCAGACCACACACTGGGCACCGACTTGGGTGAGGCCAGGGCAAGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS GCA 90 bp TCCAGAGGCCGCGTGGTACCAGAGCCTCAGCTTGCAAGAGGAGGCTaGCTCTCGCAGGGTTGGCGAGCGCAGGGCTGCGGTGGATGCCTC +
Preference number: 5 (lower is better)
Translates to: SRGRVVPEPQLARGG*LSQGWRAQGCGGCL
Trigger: GAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS GCA 90 bp GGAGGCTGCCTCTCGCAGGGTTGGCGAGCGCAGGGCTGCGGTGGATaGCTCTTTCCCTCGGTGGGTTCCAACGGCCATGTACCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGCLSQGWRAQGCGG*LFPSVGSNGHVPAW
Trigger: CCAGGCTGGTACATGGCCGTTGGAACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS GCA 90 bp TCCAGGGTGCACCTCCAGAGGCCGCGTGGTACCAGAGCCTCAGCTTaGAAGAGGAGGCTGCCTCTCGCAGGGTTGGCGAGCGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SRVHLQRPRGTRASA*KRRLPLAGLASAGL
Trigger: CAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGGTGCACCCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS CCA 90 bp CAGCCTGAGGACCCTGCCAGGAACAGGACCAAGGCGGGCAGCAGGTaGCTGGACAGAGGCATGGTTGGGCCAGAGGGAGCAGTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: QPEDPARNRTKAGSR*LDRGMVGPEGAVRP
Trigger: TGGCCGCACTGCTCCCTCTGGCCCAACCATGCCTCTGTCCAGCCACCTGCTGCCCGCCTTGGTCCTGTTCCTGGCAGGGTCCTCAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CCA 90 bp TGGCCAGGGCTCCCAGGAACAGGACCAAGGCGGGCAGCAGGTGGCTaGACAGAGGCATGGTTGGGCCAGAGGGAGCAGTGCGGCCACACA +
Preference number: 5 (lower is better)
Translates to: WPGLPGTGPRRAAGG*TEAWLGQREQCGHT
Trigger: TGTGTGGCCGCACTGCTCCCTCTGGCCCAACCATGCCTCTGTCCAGCCACCTGCTGCCCGCCTTGGTCCTGTTCCTGGGAGCCCTGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS TCA 90 bp TCCAACGGCCATGTACCAGCCCAAGTCGGTGCCCAGTGTGTGGTCTaGGTGAGGCCCAGGACCCTCCAGTGCGGCCCCTGCCCTGTCTCG +
Preference number: 5 (lower is better)
Translates to: SNGHVPAQVGAQCVV*VRPRTLQCGPCPVS
Trigger: CGAGACAGGGCAGGGGCCGCACTGGAGGGTCCTGGGCCTCACTCAGACCACACACTGGGCACCGACTTGGGCTGGTACATGGCCGTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS GCA 90 bp GGAGGCTGCCTCTCGCAGGGTTGGCGAGCGCAGGGCTGCGGTGGATaGCTCTTTCCCTCGGTGGGTTCCAACGGCCATGTACCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: GGCLSQGWRAQGCGG*LFPSVGSNGHVPAQ
Trigger: TTGGGCTGGTACATGGCCGTTGGAACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS GCA 90 bp GGGCCCGTCCTGGAGGAGCAGATCATCCAGAGCCACGTAGGAGTGTaGCACGCCTGCGGCCACTGCCTCAAACACCACCCTCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: GPVLEEQIIQSHVGV*HACGHCLKHHPPGS
Trigger: CGAGCCTGGAGGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTGGATGATCTGCTCCTCCAGGACGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS GCA 90 bp GGCGGGCCCCTAGAAGGACCTTGTCCACCTTCCAGATGCCTGCACTaGTGCTCAGGGCCTGCCATGCCAGCTCCCGGGAGCCGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: GGPLEGPCPPSRCLH*CSGPAMPAPGSRCP
Trigger: TGGACAACGGCTCCCGGGAGCTGGCATGGCAGGCCCTGAGCAGCAGTGCAGGCATCTGGAAGGTGGACAAGGTCCTTCTAGGGGCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS GCA 90 bp CAGATCATCCAGAGCCACGTAGGAGTGTGCCACGCCTGCGGCCACTaGCTCAAACACCACCTGGCGGGTGCAGGGCAGGGCAGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: QIIQSHVGVCHACGH*LKHHLAGAGQGSLS
Trigger: GCTGAGGCTGCCCTGCCCTGCACCCGCCAGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTGGATGATCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS GCA 90 bp GGTCTCTGCGCCATGGGTCAGCTCCACCCGCAGTTCAGCCACATCTaGAATGTCAGGGGTCCCAGGGCAGCTGCGGCCCTGCTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GLCAMGQLHPQFSHI*NVRGPRAAAALLVP
Trigger: GGGGACAAGCAGGGCCGCAGCTGCCCTGGGACCCCTGACATTGCAGATGTGGCTGAACTGCGGGTGGAGCTGACCCATGGCGCAGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS CCA 90 bp CTGAGGACCCTGCCAGGAACAGGACCAAGGCGGGCAGCAGGTGGCTaGACAGAGGCATGGTTGGGCCAGAGGGAGCAGTGCGGCCACACA +
Preference number: 5 (lower is better)
Translates to: LRTLPGTGPRRAAGG*TEAWLGQREQCGHT
Trigger: TGTGTGGCCGCACTGCTCCCTCTGGCCCAACCATGCCTCTGTCCAGCCACCTGCTGCCCGCCTTGGTCCTGTTCCTGGCAGGGTCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CCA 90 bp ACCACCAGCGCGGTGGTTCCGGGACCAGCCTTCCGAGCGGTTCCATaGGCCCAGGCCTGTCTCAAAGTCGGTGGCTATGTGGCGGCCACA +
Preference number: 5 (lower is better)
Translates to: TTSAVVPGPAFRAVP*AQACLKVGGYVAAT
Trigger: TGTGGCCGCCACATAGCCACCGACTTTGAGACAGGCCTGGGCCCATGGAACCGCTCGGAAGGCTGGTCCCGGAACCACCGCGCTGGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS-3UTR CAA 90 bp CACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCCTGCCTCTCGCAGGGTaGGCGAGCGCAGGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: HRATESAQGRERPGLSISLPLAG*ASAGLR
Trigger: CCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAG...GGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp GAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGGCCTCGTGCCAGCGGTaGCCCTGGGTGCCTGACCGC +
Preference number: 5 (lower is better)
Translates to: EQQSQHRAGNAQASAYPEASCQR*PWVPDR
Trigger: GCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGC...CTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGCCGCCTCCAGAGACCTaGGCCTCCAGGGGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: QHRAGNAQASAYPETCSLPPPET*ASRGEA
Trigger: GGCTTCTCCCCTGGAGGCCAAGGTCTCTGGAGGCGG...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp GGCGGCCCGGCCCCCGGGGCCCAGCACGCCAGTTTCAAAGAAGGCAAAGTGGCCACGATCTGGAACTCCTaGGCACTGGCTACCTCCACC +
Preference number: 5 (lower is better)
Translates to: GGPAPGAQHASFKEGKVATIWNS*ALATST
Trigger: GGTGGAGGTAGCCAGTGCCAAGGAGTTCCAGATCGT...GGCCACTTTGCCTTCTTTGAAACTGGCGTGCTGGGCCCCGGGGGCCGGGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS GCA 90 bp GCAGCAGGTGGCTGGACAGAGGCATGGTTGGGCCAGAGGGAGCAGTaGGGCCACACAGGGTGCCTGGGAAGTTCCGTGCGGTTATCAGCC +
Preference number: 5 (lower is better)
Translates to: AAGGWTEAWLGQREQ*GHTGCLGSSVRLSA
Trigger: GGCTGATAACCGCACGGAACTTCCCAGGCACCCTGTGTGGCCGCACTGCTCCCTCTGGCCCAACCATGCCTCTGTCCAGCCACCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317446.7
CDS GCA 90 bp GCGAGGCCCCGTGGTAACCACACTGGGCCTCATCTGAGCAGTCCCTaGAGTCACACACGAAGTTGCACACGGCCTGGCCAGGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ARPRGNHTGPHLSSP*SHTRSCTRPGQGSC
Trigger: GCAGGAGCCCTGGCCAGGCCGTGTGCAACTTCGTGTGTGACTGCAGGGACTGCTCAGATGAGGCCCAGTGTGGTTACCACGGGGCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS GCA 90 bp GTTCAGCCACATCTCCAGAGGCCGCGTGGTACCAGAGCCTCAGCTTaGAAGAGGAGGCTGCCTCTCGCAGGGTTGGCGAGCGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: VQPHLQRPRGTRASA*KRRLPLAGLASAGL
Trigger: CAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGATGTGGCTGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS GCA 90 bp GCGAGGCCCCGTGGTAACCACACTGGGCCTCATCTGAGCAGTCCCTaGAGTCACACACGAAGTTGCACACGGCCTGGCCAGGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: ARPRGNHTGPHLSSP*SHTRSCTRPGQGSQ
Trigger: CTGGGAGCCCTGGCCAGGCCGTGTGCAACTTCGTGTGTGACTGCAGGGACTGCTCAGATGAGGCCCAGTGTGGTTACCACGGGGCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS CCA 90 bp AGGGTTGGCGAGCGCAGGGCTGCGGTGGATGCCTCTTTCCCTCGGTaGGTTCCAACGGCCATGTACCAGCCCAAGTCGGTGCCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: RVGERRAAVDASFPR*VPTAMYQPKSVPSV
Trigger: CACACTGGGCACCGACTTGGGCTGGTACATGGCCGTTGGAACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CCA 90 bp AAGAGGAGGCTGCCTCTCGCAGGGTTGGCGAGCGCAGGGCTGCGGTaGATGCCTCTTTCCCTCGGTGGGTTCCAACGGCCATGTACCAGC +
Preference number: 5 (lower is better)
Translates to: KRRLPLAGLASAGLR*MPLSLGGFQRPCTS
Trigger: GCTGGTACATGGCCGTTGGAACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 90 bp GTACCAGAGCCTCAGCTTGCAAGAGGAGGCTGCCTCTCGCAGGGTTaGCGAGCGCAGGGCTGCGGTGGATGCCTCTTTCCCTCGGTGGGT +
Preference number: 5 (lower is better)
Translates to: VPEPQLARGGCLSQG*RAQGCGGCLFPSVG
Trigger: ACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 90 bp AGGGTTGGCGAGCGCAGGGCTGCGGTGGATGCCTCTTTCCCTCGGTaGGTTCCAACGGCCATGTACCAGCCTGGCGCAGGTGAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: RVGERRAAVDASFPR*VPTAMYQPGAGERS
Trigger: TGACCTCTCACCTGCGCCAGGCTGGTACATGGCCGTTGGAACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS-3UTR CAA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCTGCCTCTCGCAGGGTaGGCGAGCGCAGGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQALPLAG*ASAGLR
Trigger: CCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAG...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGGACAGGTCCCCGCAGTaGTCTTCCCCGTCGCACAGC +
Preference number: 5 (lower is better)
Translates to: RAGNAQASAYPETCSLSQDRSPQ*SSPSHS
Trigger: GCTGTGCGACGGGGAAGACAACTGCGGGGACCTGTC...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp CTGCCCCCGTTGCCCAGGCACCCATTGGCCCAGCCGGACTCACAGAAGTGCTCAGGCCTGGCAGCTCTCTaGTCCTGTCTGGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LPPLPRHPLAQPDSQKCSGLAAL*SCLGAA
Trigger: TGCTGCACCCAGACAGGACAAGAGAGCTGCCAGGCC...TGAGCACTTCTGTGAGTCCGGCTGGGCCAATGGGTGCCTGGGCAACGGGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS TCA 90 bp GTCGTGGTCAGGGCCGCGGCTCTCCACCCAGCGCCAGTGTGTGTCTaGGAGGTGGCCTGGGTACCAGCTGCATGTGTCCCGCTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: VVVRAAALHPAPVCV*EVAWVPAACVPLKV
Trigger: AACTTTGAGCGGGACACATGCAGCTGGTACCCAGGCCACCTCTCAGACACACACTGGCGCTGGGTGGAGAGCCGCGGCCCTGACCACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 90 bp TCATCAGACAGGTCCCCGCAGTTGTCTTCCCCGTCGCACAGCTGCTaGGGCTCCACGCAGACCTTGTTCTGGCAGTGGTGGTGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: SSDRSPQLSSPSHSC*GSTQTLFWQWWCPG
Trigger: CCCGGGACACCACCACTGCCAGAACAAGGTCTGCGTGGAGCCCCAGCAGCTGTGCGACGGGGAAGACAACTGCGGGGACCTGTCTGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 90 bp GGGAGCAAGGAGGGTATTGGGACAGGGGCGCACAGAGACTTGCCCTaGCCTCACCCAAGTCGGTGCCCAGTGTGTGGTCTGAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GSKEGIGTGAHRDLP*PHPSRCPVCGLSEA
Trigger: GGCCTCACTCAGACCACACACTGGGCACCGACTTGGGTGAGGCCAGGGCAAGTCTCTGTGCGCCCCTGTCCCAATACCCTCCTTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS TCA 90 bp CTCCGGGGTCCCTGGAGGAGTGTAAGGGGAGCACCCAGGTGGGAGTaGGGATGGGCAGCAGGAACCTCTGTCTCTCTCGGTGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: LRGPWRSVRGAPRWE*GWAAGTSVSLGGHC
Trigger: ACAGTGACCACCGAGAGAGACAGAGGTTCCTGCTGCCCATCCTCACTCCCACCTGGGTGCTCCCCTTACACTCCTCCAGGGACCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS GCA 90 bp GGACTCAAAGTCTGTGGTGCCACAGGCCTGCTCGTCCTCGCCCCCTaGGCACTGCTCCTCGAAGTCACACAGTTGTTCCGGGGGCACACA +
Preference number: 5 (lower is better)
Translates to: GLKVCGATGLLVLAP*ALLLEVTQLFRGHT
Trigger: TGTGTGCCCCCGGAACAACTGTGTGACTTCGAGGAGCAGTGCGCAGGGGGCGAGGACGAGCAGGCCTGTGGCACCACAGACTTTGAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 90 bp TCAGGGCCGCGGCTCTCCACCCAGCGCCAGTGTGTGTCTGAGAGGTaGCCTGGGTACCAGCTGCATGTGTCCCGCTCAAAGTTACAGGAG +
Preference number: 5 (lower is better)
Translates to: SGPRLSTQRQCVSER*PGYQLHVSRSKLQE
Trigger: CTCCTGTAACTTTGAGCGGGACACATGCAGCTGGTACCCAGGCCACCTCTCAGACACACACTGGCGCTGGGTGGAGAGCCGCGGCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS-3UTR CAA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGCAGTCACACACGAAGTaGCACACGGCCTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWQSHTK*HTAWPG
Trigger: CCCTGGCCAGGCCGTGTGCAACTTCGTGTGTGACTG...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp AGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGTCCCAGAAGACCAGCGAGCAGTaGGAGGTGCCTGAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: RAGNAQASAYPETCSLSQKTSEQ*EVPEAW
Trigger: CCAAGCCTCAGGCACCTCCAACTGCTCGCTGGTCTT...CTGGGACAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp GGTCTGACCAAGTGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGGCAAGATGCCCCTGCTaGCAGGAATCCTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: GLTKCWMSREEAGPCLGWARCPC*QESWSR
Trigger: GCGGCTCCAGGATTCCTGCAAGCAGGGGCATCTTGC...CCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCACTTGGTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCTCGTGCCAGCGGTaGCCCTGGGTGCCTGACCGC +
Preference number: 5 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNASCQR*PWVPDR
Trigger: GCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGC...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp GGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCCCGCCTCCAGAGACCTaGGCCTCCAGGGGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GCLFTEQQSQHRAGNAQAPPPET*ASRGEA
Trigger: GGCTTCTCCCCTGGAGGCCAAGGTCTCTGGAGGCGG...GGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS GCA 90 bp GTGGGGCTACAGTCCCTCAGGGTCACGTTGTCCACCCCAGCTCCCTaGTGGTCAGGGCCATCCAAGTCCACCAAACCGACAAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: VGLQSLRVTLSTPAP*WSGPSKSTKPTNSS
Trigger: GCTGGAGTTTGTCGGTTTGGTGGACTTGGATGGCCCTGACCAGCAGGGAGCTGGGGTGGACAACGTGACCCTGAGGGACTGTAGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445819.5
ENST00000485732.5
CDS CCA 90 bp CTGTGCAGGGAGCACCCAGGGGCTGGCCAGGGAACTTGCGGAGTGTaGCGGTACCTCGGGGCTGGCTCTGTAAATAATAAGCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: LCREHPGAGQGTCGV*RYLGAGSVNNKPGG
Trigger: TCCACCTGGCTTATTATTTACAGAGCCAGCCCCGAGGTACCGCCACACTCCGCAAGTTCCCTGGCCAGCCCCTGGGTGCTCCCTGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481327.1
CDS CCA 90 bp CAGGTGGGAGTGAGGATGGGCAGCAGGAACCTCTGTCTCTCTCGGTaGTCACTGTGGGGCTACAGTCCCTCAGGGTCACGTTGTCCACCC +
Preference number: 5 (lower is better)
Translates to: QVGVRMGSRNLCLSR*SLWGYSPSGSRCPP
Trigger: GGGTGGACAACGTGACCCTGAGGGACTGTAGCCCCACAGTGACCACCGAGAGAGACAGAGGTTCCTGCTGCCCATCCTCACTCCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS-3UTR CAA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAGCCTCGTGCCAGCGGTaGCCCTGGGTGCCTGACCGC +
Preference number: 5 (lower is better)
Translates to: SWARVFIHRATESAQGREASCQR*PWVPDR
Trigger: GCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGC...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGCATGGCCCGAGGCATaGGCCTGCCGCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGAWPEA*ACRLQR
Trigger: TCTCTGGAGGCGGCAGGCCAATGCCTCGGGCCATGC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp CAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGCTCCCGGGAGCCGTaGTCCACCACAACTAGTGCC +
Preference number: 5 (lower is better)
Translates to: QSNRVSTGQGTPRPQHILSSREP*STTTSA
Trigger: GGCACTAGTTGTGGTGGACAACGGCTCCCGGGAGCT...CAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR CAA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTTTGCCCAGGCACCCATaGGCCCAGCCGGACTCACAG +
Preference number: 5 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPLPRHP*AQPDSQ
Trigger: CTGTGAGTCCGGCTGGGCCAATGGGTGCCTGGGCAA...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CAA 90 bp TGCTGGATGTCACGTGAGGAAGCGGGGCCTTGTCTGGGGTGGTCTACGGATCACCTGCTGTCTGCAGACTaGGTGGGGCTCATGGCCCCA +
Preference number: 5 (lower is better)
Translates to: CWMSREEAGPCLGWSTDHLLSAD*VGLMAP
Trigger: TGGGGCCATGAGCCCCACCAAGTCTGCAGACAGCAG...GTGATCCGTAGACCACCCCAGACAAGGCCCCGCTTCCTCACGTGACATCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CAA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGCACCATGTAGTGCCCTaGGGCTGTCTCAGTGGTATG +
Preference number: 5 (lower is better)
Translates to: QHRAGNAQASAYPETCSLHHVVP*GCLSGM
Trigger: CATACCACTGAGACAGCCCAAGGGCACTACATGGTG...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp TCAAAATCACAGGAACCTGCAGGACATGGGTGGGTGAGTGGTGCTGCCCCACGGACCTTCAGCTCCCCCTaGTCTGAGAGCAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SKSQEPAGHGWVSGAAPRTFSSP*SESRAR
Trigger: CCTGGCCCTGCTCTCAGACAAGGGGGAGCTGAAGGT...CCGTGGGGCAGCACCACTCACCCACCCATGTCCTGCAGGTTCCTGTGATTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CAA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCCAGGATGGACCTaGCCCTGGGTGTGGGCACAG +
Preference number: 5 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRPPGWT*PWVWAQ
Trigger: CTGTGCCCACACCCAGGGCAAGGTCCATCCTGGAGG...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS CCA 90 bp AGTCCCAGAACTCTAGGTCATCTAGAGCCACAGCGCCCCTGTGGGTaGCATTTCGGGTGGCAGAGAAGGTCACTCGGAAGTCACCCCGGA +
Preference number: 5 (lower is better)
Translates to: SPRTLGHLEPQRPCG*HFGWQRRSLGSHPG
Trigger: TCCGGGGTGACTTCCGAGTGACCTTCTCTGCCACCCGAAATGCCACCCACAGGGGCGCTGTGGCTCTAGATGACCTAGAGTTCTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS-3UTR CAA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCCAGTCACACACGAAGTaGCACACGGCCTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: FIHRATESAQGRERPGLSQSHTK*HTAWPG
Trigger: CCCTGGCCAGGCCGTGTGCAACTTCGTGTGTGACTG...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp CCCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGCAAGATGCCCCTGCTaGCAGGAATCCTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: PSWARVFIHRATESAQGRARCPC*QESWSR
Trigger: GCGGCTCCAGGATTCCTGCAAGCAGGGGCATCTTGC...CCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAGCATGGCCCGAGGCATaGGCCTGCCGCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: SWARVFIHRATESAQGREAWPEA*ACRLQR
Trigger: TCTCTGGAGGCGGCAGGCCAATGCCTCGGGCCATGC...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp GGGACATGTGAGCCCTCCAAAGCAGCCCCCACATCTGGGGCTAAGGAGGAAGCCCACCATGTAGTGCCCTaGGGCTGTCTCAGTGGTATG +
Preference number: 5 (lower is better)
Translates to: GTCEPSKAAPTSGAKEEAHHVVP*GCLSGM
Trigger: CATACCACTGAGACAGCCCAAGGGCACTACATGGTG...GGCTTCCTCCTTAGCCCCAGATGTGGGGGCTGCTTTGGAGGGCTCACATGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CAA 90 bp AGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCGTAGTGCGTCTGGGCTaGTGTCCACCACCATGTAGT +
Preference number: 5 (lower is better)
Translates to: SQHRAGNAQASAYPETCSVVRLG*CPPPCS
Trigger: ACTACATGGTGGTGGACACAAGCCCAGACGCACTAC...GCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp CAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCACGATCTGGAACTCCTaGGCACTGGCTACCTCCACC +
Preference number: 5 (lower is better)
Translates to: QQSQHRAGNAQASAYPETTIWNS*ALATST
Trigger: GGTGGAGGTAGCCAGTGCCAAGGAGTTCCAGATCGT...GGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp CTGCCCCCGTTGCCCAGGCACCCATTGGCCCAGCCGGACTCACAGAAGTGCTCAGCATTGAAAAGGATGTaGTCAAAGCCAGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LPPLPRHPLAQPDSQKCSALKRM*SKPGAV
Trigger: CACAGCCCCTGGCTTTGACAACATCCTTTTCAATGC...TGAGCACTTCTGTGAGTCCGGCTGGGCCAATGGGTGCCTGGGCAACGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS-3UTR CAA 90 bp TCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAAGACAGGTCCCCGCAGTaGTCTTCCCCGTCGCACAGC +
Preference number: 5 (lower is better)
Translates to: SWARVFIHRATESAQGREDRSPQ*SSPSHS
Trigger: GCTGTGCGACGGGGAAGACAACTGCGGGGACCTGTC...TTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGAAGACCAGCGAGCAGTaGGAGGTGCCTGAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRKTSEQ*EVPEAW
Trigger: CCAAGCCTCAGGCACCTCCAACTGCTCGCTGGTCTT...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGGAGCACAAAGTGGCCTaGGCCTGTGGTGTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGEHKVA*ACGVVV
Trigger: CACGACCACACCACAGGCCAAGGCCACTTTGTGCTC...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp AGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGTAGTGCGTCTGGGCTaGTGTCCACCACCATGTAGT +
Preference number: 5 (lower is better)
Translates to: RVSTGQGTPRPQHILRPAVVRLG*CPPPCS
Trigger: ACTACATGGTGGTGGACACAAGCCCAGACGCACTAC...TGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTACGATCTGGAACTCCTaGGCACTGGCTACCTCCACC +
Preference number: 5 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPTIWNS*ALATST
Trigger: GGTGGAGGTAGCCAGTGCCAAGGAGTTCCAGATCGT...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp CAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCAGCCTGGCATTGAAAAGGATGTaGTCAAAGCCAGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: QHRAGNAQASAYPETCSLALKRM*SKPGAV
Trigger: CACAGCCCCTGGCTTTGACAACATCCTTTTCAATGC...CAGGCTGCAGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS TCA 90 bp CCTTTAAGTCAGGCTGTGGAGGATCACGCCGTCATTCATTCGTCCTaGGCAGCCAGGTGCTGTCCGGTGCCAGATACAGGGTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PLSQAVEDHAVIHSS*AARCCPVPDTGSLL
Trigger: AAGCAGGGACCCTGTATCTGGCACCGGACAGCACCTGGCTGCTCAGGACGAATGAATGACGGCGTGATCCTCCACAGCCTGACTTAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS-3UTR CAA 90 bp CATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGGCTCCACGCAGACCTaGTTCTGGCAGTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: HGPGCLFTEQQSQHRAGNGSTQT*FWQWWC
Trigger: ACACCACCACTGCCAGAACAAGGTCTGCGTGGAGCC...GTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp TTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCCTCGAAGTCACACAGTaGTTCCGGGGGCACACACAG +
Preference number: 5 (lower is better)
Translates to: FIHRATESAQGRERPGLSLEVTQ*FRGHTQ
Trigger: CTGTGTGTGCCCCCGGAACAACTGTGTGACTTCGAG...GCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp ATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGGAGCACAAAGTGGCCTaGGCCTGTGGTGTGGTCGTG +
Preference number: 5 (lower is better)
Translates to: MGQGVYSQSNRVSTGQGTEHKVA*ACGVVV
Trigger: CACGACCACACCACAGGCCAAGGCCACTTTGTGCTC...CGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS-3UTR CAA 90 bp CAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGAACGCCCAGGGCCCCTAGAAGGACCTaGTCCACCTTCCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: QGVYSQSNRVSTGQGTPRAPRRT*STFQMP
Trigger: AGGCATCTGGAAGGTGGACAAGGTCCTTCTAGGGGC...CCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS-3UTR CAA 90 bp CCTCATGGGCCAGGGTGTTTATTCACAGAGCAACAGAGTCAGCACAGGGCAGGGCACCATGTAGTGCCCTaGGGCTGTCTCAGTGGTATG +
Preference number: 5 (lower is better)
Translates to: PHGPGCLFTEQQSQHRAGHHVVP*GCLSGM
Trigger: CATACCACTGAGACAGCCCAAGGGCACTACATGGTG...CCCTGCCCTGTGCTGACTCTGTTGCTCTGTGAATAAACACCCTGGCCCATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp AACAGAGTCAGCACAGGGCAGGGAACGCCCAGGCCTCAGCATATCCTGAGACCTGCATTGAAAAGGATGTaGTCAAAGCCAGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: NRVSTGQGTPRPQHILRPALKRM*SKPGAV
Trigger: CACAGCCCCTGGCTTTGACAACATCCTTTTCAATGC...AGGTCTCAGGATATGCTGAGGCCTGGGCGTTCCCTGCCCTGTGCTGACTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
CDS-3UTR CAA 90 bp TGCTGGCTCCTGGGGTTCACCCCTATTTCAAAGGCAGAGGGTATTGGTTCTGCTGTAGTGCGTCTGGGCTaGTGTCCACCACCATGTAGT +
Preference number: 5 (lower is better)
Translates to: CWLLGFTPISKAEGIGSAVVRLG*CPPPCS
Trigger: ACTACATGGTGGTGGACACAAGCCCAGACGCACTAC...AGCAGAACCAATACCCTCTGCCTTTGAAATAGGGGTGAACCCCAGGAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS GCA 72 bp CCCCACCCTGCACTCACCCTCCAGGCTCGCTCGGCCTaGACGTCCATGCTGCCCAGGCGCCAGGCAAGCCCG +
Preference number: 6 (lower is better)
Translates to: PHPALTLQARSA*TSMLPRRQASP
Trigger: CGGGCTTGCCTGGCGCCTGGGCAGCATGGACGTGCAGGCCGAGCGAGCCTGGAGGGTGAGTGCAGGGTGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479475.1
CDS CCA 72 bp ACGTCCATGCTGCCCAGGCGCCAGGCAAGCCCGCCGTaGGCACTGAGGCTGAGCACCTGGTGCCTCCCGCGC +
Preference number: 6 (lower is better)
Translates to: TSMLPRRQASPP*ALRLSTWCLPR
Trigger: GCGCGGGAGGCACCAGGTGCTCAGCCTCAGTGCCCACGGCGGGCTTGCCTGGCGCCTGGGCAGCATGGACGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS TCA 72 bp GGCCCAGGCCTCGTGCCAGCGGTTGCCCTGGGTGCCTaGCCGCGACCACAGGTGTGTCTCCTCCCCTTCCCG +
Preference number: 6 (lower is better)
Translates to: GPGLVPAVALGA*PRPQVCLLPFP
Trigger: CGGGAAGGGGAGGAGACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGCCTGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS GCA 72 bp GGCCCGGCCGCACGGCCACATCGTCCAGCGCCATGGTaGCGTGGTATCCGTCCCGGAGGCCCTCGAACAGCA +
Preference number: 6 (lower is better)
Translates to: GPAARPHRPAPW*RGIRPGGPRTA
Trigger: TGCTGTTCGAGGGCCTCCGGGACGGATACCACGGCACCATGGCGCTGGACGATGTGGCCGTGCGGCCGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 72 bp CGTGGCCAGGAGGGGCGCTCAGGACCACCAGCGCGGTaGTTCCGGGACCAGCCTTCCGAGCGGTTCCATGGG +
Preference number: 6 (lower is better)
Translates to: RGQEGRSGPPAR*FRDQPSERFHG
Trigger: CCCATGGAACCGCTCGGAAGGCTGGTCCCGGAACCACCGCGCTGGTGGTCCTGAGCGCCCCTCCTGGCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 72 bp GGAGCCCTGTGCACTGTTCCGGCTGTGGTCACGGCGTaGCCAGGAGGGGCGCTCAGGACCACCAGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: GALCTVPAVVTA*PGGALRTTSAV
Trigger: CACCGCGCTGGTGGTCCTGAGCGCCCCTCCTGGCCACGCCGTGACCACAGCCGGAACAGTGCACAGGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CCA 72 bp AGGGGCCCGGCCGCACGGCCACATCGTCCAGCGCCATaGTGCCGTGGTATCCGTCCCGGAGGCCCTCGAACA +
Preference number: 6 (lower is better)
Translates to: RGPAARPHRPAP*CRGIRPGGPRT
Trigger: TGTTCGAGGGCCTCCGGGACGGATACCACGGCACCATGGCGCTGGACGATGTGGCCGTGCGGCCGGGCCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS GCA 72 bp GGGTGGCCCAGGCCTCGTGCCAGCGGTTGCCCTGGGTaGCTGACCGCGACCACAGGTGTGTCTCCTCCCCTT +
Preference number: 6 (lower is better)
Translates to: GWPRPRASGCPG*LTATTGVSPPL
Trigger: AAGGGGAGGAGACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGCCTGGGCCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 72 bp ACCAGCCTGTGCACTGTTCCGGCTGTGGTCACGGCGTaGCCAGGAGGGGCGCTCAGGACCACCAGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: TSLCTVPAVVTA*PGGALRTTSAV
Trigger: CACCGCGCTGGTGGTCCTGAGCGCCCCTCCTGGCCACGCCGTGACCACAGCCGGAACAGTGCACAGGCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS TCA 72 bp GCCTCACCCAAGTCGGTGCCCAGTGTGTGGTCTGAGTaGGGCCCAGGACCCTCCAGTGCGGCCCCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: ASPKSVPSVWSE*GPGPSSAAPAL
Trigger: CAGGGCAGGGGCCGCACTGGAGGGTCCTGGGCCTCACTCAGACCACACACTGGGCACCGACTTGGGTGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS GCA 72 bp GGTGGGAAAGGGTGGCCCAGGCCTCGTGCCAGCGGTTaGCCTGGGTGCCTGACCGCGACCACAGGTGTGTCT +
Preference number: 6 (lower is better)
Translates to: GGKGWPRPRASG*PGCLTATTGVS
Trigger: AGACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGCCTGGGCCACCCTTTCCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS GCA 72 bp ACTGCCTCAAACACCACCCTCCAGGCTCGCTCGGCCTaGACGTCCATGCTGCCCAGGCGCCAGGCAAGCCCG +
Preference number: 6 (lower is better)
Translates to: TASNTTLQARSA*TSMLPRRQASP
Trigger: CGGGCTTGCCTGGCGCCTGGGCAGCATGGACGTGCAGGCCGAGCGAGCCTGGAGGGTGGTGTTTGAGGCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS GCA 72 bp CAGCCACATCTGCAATGTCAGGGGTCCCAGGGCAGCTaGGGCCCTGCTTGTCCCCAGCTGCCCACCCGCCCT +
Preference number: 6 (lower is better)
Translates to: QPHLQCQGSQGS*GPACPQLPTRP
Trigger: AGGGCGGGTGGGCAGCTGGGGACAAGCAGGGCCGCAGCTGCCCTGGGACCCCTGACATTGCAGATGTGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS CCA 72 bp CCTGCTCGAAGTCACAGGCGAAGGGGGCGCCCAGGGTaGGCGAGGCCCCGTGGTAACCACACTGGGCCTCAT +
Preference number: 6 (lower is better)
Translates to: PARSHRRRGRPG*ARPRGNHTGPH
Trigger: ATGAGGCCCAGTGTGGTTACCACGGGGCCTCGCCCACCCTGGGCGCCCCCTTCGCCTGTGACTTCGAGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 72 bp GAAAGGGTGGCCCAGGCCTCGTGCCAGCGGTTGCCCTaGGTGCCTGACCGCGACCACAGGTGTGTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ERVAQASCQRLP*VPDRDHRCVSS
Trigger: GGAGGAGACACACCTGTGGTCGCGGTCAGGCACCCAGGGCAACCGCTGGCACGAGGCCTGGGCCACCCTTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CAA 72 bp GGCACACACAGGTCCCCGCAGGCAAGATGCCCCTGCTaGCAGGAATCCTGGAGCCGCGAGCTGGGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: GTHRSPQARCPC*QESWSRELGGR
Trigger: CCTGCCGCCCAGCTCGCGGCTCCAGGATTCCTGCAAGCAGGGGCATCTTGCCTGCGGGGACCTGTGTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CAA 90 bp GTCCAGGGTGCACCTCCAGAGGCCGCGTGGTACCAGAGCCTCAGCTaGCAAGAGGAGGCTGCCTCTCGCAGGGTTGGCGAGCGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: VQGAPPEAAWYQSLS*QEEAASRRVGERRA
Trigger: AGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGGTGCACCCTGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS TCA 72 bp TGCGGCCCCTGCCCTGTCTCGGAGCCAGCTGTAGCCTaGGGTACTAATGTCCCGCCAGCCGCAGGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: CGPCPVSEPAVA*GTNVPPAAGVL
Trigger: CAGGACCCCTGCGGCTGGCGGGACATTAGTACCTCAGGCTACAGCTGGCTCCGAGACAGGGCAGGGGCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS TCA 72 bp TACCAGCCCAAGTCGGTGCCCAGTGTGTGGTCTGAGTaGGGCCCAGGACCCTCCAGTGCGGCCCCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: YQPKSVPSVWSE*GPGPSSAAPAL
Trigger: CAGGGCAGGGGCCGCACTGGAGGGTCCTGGGCCTCACTCAGACCACACACTGGGCACCGACTTGGGCTGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS GCA 72 bp CCTGAGGTACTAATGTCCCGCCAGCCGCAGGGGTCCTaGTCGAAGTCACAGGCGAAGGGGGCGCCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: PEVLMSRQPQGS*SKSQAKGAPRV
Trigger: CACCCTGGGCGCCCCCTTCGCCTGTGACTTCGAGCAGGACCCCTGCGGCTGGCGGGACATTAGTACCTCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS GCA 72 bp CGCGTGGTACCAGAGCCTCAGCTTGCAAGAGGAGGCTaGCTCTCGCAGGGTTGGCGAGCGCAGGGCTGCGGT +
Preference number: 6 (lower is better)
Translates to: RVVPEPQLARGG*LSQGWRAQGCG
Trigger: ACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 72 bp CTGCCTCTCGCAGGGTTGGCGAGCGCAGGGCTGCGGTaGATGCCTCTTTCCCTCGGTGGGTTCCAACGGCCA +
Preference number: 6 (lower is better)
Translates to: LPLAGLASAGLR*MPLSLGGFQRP
Trigger: TGGCCGTTGGAACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 72 bp GAGACCAGGAAGGAGCCCTGTGCACTGTTCCGGCTGTaGTCACGGCGTGGCCAGGAGGGGCGCTCAGGACCA +
Preference number: 6 (lower is better)
Translates to: ETRKEPCALFRL*SRRGQEGRSGP
Trigger: TGGTCCTGAGCGCCCCTCCTGGCCACGCCGTGACCACAGCCGGAACAGTGCACAGGGCTCCTTCCTGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CCA 72 bp GCCTTGGGGGTCCAGGGTGCACCTCCAGAGGCCGCGTaGTACCAGAGCCTCAGCTTGCAAGAGGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: ALGVQGAPPEAA*YQSLSLQEEAA
Trigger: GGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGGTGCACCCTGGACCCCCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS CAA 72 bp AGCCGGAAGGGCCGGCGGCGGGCCCCTAGAAGGACCTaGTCCACCTTCCAGATGCCTGCACTGCTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: SRKGRRRAPRRT*STFQMPALLLR
Trigger: CCTGAGCAGCAGTGCAGGCATCTGGAAGGTGGACAAGGTCCTTCTAGGGGCCCGCCGCCGGCCCTTCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS CAA 72 bp ACTGTGCAGGGAGCACCCAGGGGCTGGCCAGGGAACTaGCGGAGTGTGGCGGTACCTCGGGGCTGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: TVQGAPRGWPGN*RSVAVPRGWLC
Trigger: ACAGAGCCAGCCCCGAGGTACCGCCACACTCCGCAAGTTCCCTGGCCAGCCCCTGGGTGCTCCCTGCACAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481327.1
CDS CAA 90 bp GGTACCAGAGCCTCAGCTTGCAAGAGGAGGCTGCCTCTCGCAGGGTaGGCGAGCGCAGGGCTGCGGTGGATGCCTCTTTCCCTCGGTGGG +
Preference number: 6 (lower is better)
Translates to: GTRASACKRRLPLAG*ASAGLRWMPLSLGG
Trigger: CCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS GCA 72 bp GTGCCACAGGCCTGCTCGTCCTCGCCCCCTGCGCACTaGTCCTCGAAGTCACACAGTTGTTCCGGGGGCACA +
Preference number: 6 (lower is better)
Translates to: VPQACSSSPPAH*SSKSHSCSGGT
Trigger: TGTGCCCCCGGAACAACTGTGTGACTTCGAGGAGCAGTGCGCAGGGGGCGAGGACGAGCAGGCCTGTGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS GCA 72 bp CACCTCCAGAGGCCGCGTGGTACCAGAGCCTCAGCTTaGAAGAGGAGGCTGCCTCTCGCAGGGTTGGCGAGC +
Preference number: 6 (lower is better)
Translates to: HLQRPRGTRASA*KRRLPLAGLAS
Trigger: GCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS GCA 72 bp GCCATGGGTCAGCTCCACCCGCAGTTCAGCCACATCTaGAATGTCAGGGGTCCCAGGGCAGCTGCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: AMGQLHPQFSHI*NVRGPRAAAAL
Trigger: CAGGGCCGCAGCTGCCCTGGGACCCCTGACATTGCAGATGTGGCTGAACTGCGGGTGGAGCTGACCCATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS GCA 72 bp CTCAAAATCACAGGAACCCTCCAGGCTCGCTCGGCCTaGACGTCCATGCTGCCCAGGCGCCAGGCAAGCCCG +
Preference number: 6 (lower is better)
Translates to: LKITGTLQARSA*TSMLPRRQASP
Trigger: CGGGCTTGCCTGGCGCCTGGGCAGCATGGACGTGCAGGCCGAGCGAGCCTGGAGGGTTCCTGTGATTTTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS CCA 72 bp CAGTCCCTGCAGTCACACACGAAGTTGCACACGGCCTaGCCAGGGCTCCTGCAGTGGTTGGGGACCCAGGCC +
Preference number: 6 (lower is better)
Translates to: QSLQSHTKLHTA*PGLLQWLGTQA
Trigger: GGCCTGGGTCCCCAACCACTGCAGGAGCCCTGGCCAGGCCGTGTGCAACTTCGTGTGTGACTGCAGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CCA 72 bp CCTCAGCTTGCAAGAGGAGGCTGCCTCTCGCAGGGTTaGCGAGCGCAGGGCTGCGGTGGATGCCTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: PQLARGGCLSQG*RAQGCGGCLFP
Trigger: GGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 72 bp TGGCCCGAGGCATTGGCCTGCCGCCTCCAGAGACCTTaGCCTCCAGGGGAGAAGCCGCAGTCTGAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: WPEALACRLQRP*PPGEKPQSESS
Trigger: TGAGGACTCAGACTGCGGCTTCTCCCCTGGAGGCCAAGGTCTCTGGAGGCGGCAGGCCAATGCCTCGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 72 bp GAGCGCAGGGCTGCGGTGGATGCCTCTTTCCCTCGGTaGGTTCCAACGGCCATGTACCAGCCTGGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: ERRAAVDASFPR*VPTAMYQPGAG
Trigger: ACCTGCGCCAGGCTGGTACATGGCCGTTGGAACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS CAA 72 bp GCCTCAGCTTGCAAGAGGAGGCTGCCTCTCGCAGGGTaGGCGAGCGCAGGGCTGCGGTGGATGCCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: ASACKRRLPLAG*ASAGLRWMPLS
Trigger: GGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CAA 72 bp GGGAGGCCGTCTGGCCCCGGGGTAGTGCGTCTGGGCTaGTGTCCACCACCATGTAGTGCCCTTGGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: GRPSGPGVVRLG*CPPPCSALGLS
Trigger: AGACAGCCCAAGGGCACTACATGGTGGTGGACACAAGCCCAGACGCACTACCCCGGGGCCAGACGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS TCA 72 bp TCCCAATCTGGGGCCCATGGAGGTGGTACCAGAAGCTaGGACACTCCGTGGGTGCTGCTGGCACCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: SQSGAHGGGTRS*DTPWVLLAPGA
Trigger: GGCCCCAGGTGCCAGCAGCACCCACGGAGTGTCTCAGCTTCTGGTACCACCTCCATGGGCCCCAGATTGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS GCA 72 bp TGGTTGGGCCAGAGGGAGCAGTGCGGCCACACAGGGTaGCTGGGAAGTTCCGTGCGGTTATCAGCCTGCGCT +
Preference number: 6 (lower is better)
Translates to: WLGQREQCGHTG*LGSSVRLSACA
Trigger: AGCGCAGGCTGATAACCGCACGGAACTTCCCAGGCACCCTGTGTGGCCGCACTGCTCCCTCTGGCCCAACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317446.7
CDS GCA 72 bp CTCTCGCAGGGTTGGCGAGCGCAGGGCTGCGGTGGATaGCTCTTTCCCTCGGTGGGTTCCAACGGCCATGTA +
Preference number: 6 (lower is better)
Translates to: LSQGWRAQGCGG*LFPSVGSNGHV
Trigger: TACATGGCCGTTGGAACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTCGCCAACCCTGCGAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS GCA 72 bp CATCTCCAGAGGCCGCGTGGTACCAGAGCCTCAGCTTaGAAGAGGAGGCTGCCTCTCGCAGGGTTGGCGAGC +
Preference number: 6 (lower is better)
Translates to: HLQRPRGTRASA*KRRLPLAGLAS
Trigger: GCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS GCA 72 bp GTCTGTGGTGCCACAGGCCTGCTCGTCCTCGCCCCCTaGGCACTGCTCCTCGAAGTCACACAGTTGTTCCGG +
Preference number: 6 (lower is better)
Translates to: VCGATGLLVLAP*ALLLEVTQLFR
Trigger: CCGGAACAACTGTGTGACTTCGAGGAGCAGTGCGCAGGGGGCGAGGACGAGCAGGCCTGTGGCACCACAGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000481327.1
ENST00000485732.5
CDS GCA 72 bp GGCGGGCCCCTAGAAGGACCTTGTCCACCTTCCAGATaGCTGCACTGCTGCTCAGGGCCTGCCATGCCAGCT +
Preference number: 6 (lower is better)
Translates to: GGPLEGPCPPSR*LHCCSGPAMPA
Trigger: AGCTGGCATGGCAGGCCCTGAGCAGCAGTGCAGGCATCTGGAAGGTGGACAAGGTCCTTCTAGGGGCCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS CCA 72 bp GAGCGCAGGGCTGCGGTGGATGCCTCTTTCCCTCGGTaGGTTCCAACGGCCATGTACCAGCCCAAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: ERRAAVDASFPR*VPTAMYQPKSV
Trigger: CACCGACTTGGGCTGGTACATGGCCGTTGGAACCCACCGAGGGAAAGAGGCATCCACCGCAGCCCTGCGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CCA 72 bp GCGGTGGTTCCGGGACCAGCCTTCCGAGCGGTTCCATaGGCCCAGGCCTGTCTCAAAGTCGGTGGCTATGTG +
Preference number: 6 (lower is better)
Translates to: AVVPGPAFRAVP*AQACLKVGGYV
Trigger: CACATAGCCACCGACTTTGAGACAGGCCTGGGCCCATGGAACCGCTCGGAAGGCTGGTCCCGGAACCACCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 72 bp GTAGTGCCCTTGGGCTGTCTCAGTGGTATGGTCTGTTaGGGGGCCCCAGGCAGCATGGCCCGAGGCATTGGC +
Preference number: 6 (lower is better)
Translates to: VVPLGCLSGMVC*GAPGSMARGIG
Trigger: GCCAATGCCTCGGGCCATGCTGCCTGGGGCCCCCCAACAGACCATACCACTGAGACAGCCCAAGGGCACTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 72 bp GGTGCCAGATACAGGGTCCCTGCTTTAGTTAGGGTCTaGGGGCCCCCGGAGGTGGTGACGCAGGGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: GARYRVPALVRV*GPPEVVTQGAG
Trigger: TCCTGCACCCTGCGTCACCACCTCCGGGGGCCCCCAGACCCTAACTAAAGCAGGGACCCTGTATCTGGCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS CAA 90 bp AGTTCAGCCACATCTCCAGAGGCCGCGTGGTACCAGAGCCTCAGCTaGCAAGAGGAGGCTGCCTCTCGCAGGGTTGGCGAGCGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: SSATSPEAAWYQSLS*QEEAASRRVGERRA
Trigger: AGCCCTGCGCTCGCCAACCCTGCGAGAGGCAGCCTCCTCTTGCAAGCTGAGGCTCTGGTACCACGCGGCCTCTGGAGATGTGGCTGAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CAA 90 bp GGGGCAGGGAGCAAGGAGGGTATTGGGACAGGGGCGCACAGAGACTaGCCCTGGCCTCACCCAAGTCGGTGCCCAGTGTGTGGTCTGAGT +
Preference number: 6 (lower is better)
Translates to: GAGSKEGIGTGAHRD*PWPHPSRCPVCGLS
Trigger: ACTCAGACCACACACTGGGCACCGACTTGGGTGAGGCCAGGGCAAGTCTCTGTGCGCCCCTGTCCCAATACCCTCCTTGCTCCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS GCA 72 bp CTAGAAGGACCTTGTCCACCTTCCAGATGCCTGCACTaGTGCTCAGGGCCTGCCATGCCAGCTCCCGGGAGC +
Preference number: 6 (lower is better)
Translates to: LEGPCPPSRCLH*CSGPAMPAPGS
Trigger: GCTCCCGGGAGCTGGCATGGCAGGCCCTGAGCAGCAGTGCAGGCATCTGGAAGGTGGACAAGGTCCTTCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445819.5
CDS CCA 72 bp GCGACCACAGGTGTGTCTCCTCCCCTTCCCGTCTCATaGCTAGGCGCAGAGTCCCAATCTGGGGCCCATGGA +
Preference number: 6 (lower is better)
Translates to: ATTGVSPPLPVS*LGAESQSGAHG
Trigger: TCCATGGGCCCCAGATTGGGACTCTGCGCCTAGCCATGAGACGGGAAGGGGAGGAGACACACCTGTGGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 72 bp TGTGTCCCGCTCAAAGTTACAGGAGACCTCTGGGGGTaGGGCCAGGTGGCGTCACACACCTTCTCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: CVPLKVTGDLWG*GQVASHTFSPP
Trigger: GGGAGGGGAGAAGGTGTGTGACGCCACCTGGCCCCACCCCCAGAGGTCTCCTGTAACTTTGAGCGGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS CAA 90 bp TGGAGGTCAGGGAGGCCGTCTGGCCCCGGGGTAGTGCGTCTGGGCTaGTGTCCACCACCATGTAGTGCCCTTGGGCTGTCTCAGTGGTAT +
Preference number: 6 (lower is better)
Translates to: WRSGRPSGPGVVRLG*CPPPCSALGLSQWY
Trigger: ATACCACTGAGACAGCCCAAGGGCACTACATGGTGGTGGACACAAGCCCAGACGCACTACCCCGGGGCCAGACGGCCTCCCTGACCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CAA 90 bp TCTCTCTCGGTGGTCACTGTGGGGCTACAGTCCCTCAGGGTCACGTaGTCCACCCCAGCTCCCTGCTGGTCAGGGCCATCCAAGTCCACC +
Preference number: 6 (lower is better)
Translates to: SLSVVTVGLQSLRVT*STPAPCWSGPSKST
Trigger: GGTGGACTTGGATGGCCCTGACCAGCAGGGAGCTGGGGTGGACAACGTGACCCTGAGGGACTGTAGCCCCACAGTGACCACCGAGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445819.5
ENST00000485732.5
CDS TCA 72 bp GGGCGAGGCCCCGTGGTAACCACACTGGGCCTCATCTaGGCAGTCCCTGCAGTCACACACGAAGTTGCACAC +
Preference number: 6 (lower is better)
Translates to: GRGPVVTTLGLI*AVPAVTHEVAH
Trigger: GTGTGCAACTTCGTGTGTGACTGCAGGGACTGCTCAGATGAGGCCCAGTGTGGTTACCACGGGGCCTCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS TCA 72 bp CCCTGGAGGAGTGTAAGGGGAGCACCCAGGTGGGAGTaGGGATGGGCAGCAGGAACCTCTGTCTCTCTCGGT +
Preference number: 6 (lower is better)
Translates to: PWRSVRGAPRWE*GWAAGTSVSLG
Trigger: ACCGAGAGAGACAGAGGTTCCTGCTGCCCATCCTCACTCCCACCTGGGTGCTCCCCTTACACTCCTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS GCA 72 bp CCTCATCTGAGCAGTCCCTGCAGTCACACACGAAGTTaGACACGGCCTGGCCAGGGCTCCTGCAGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: PHLSSPCSHTRS*TRPGQGSCSGW
Trigger: CCAACCACTGCAGGAGCCCTGGCCAGGCCGTGTGCAACTTCGTGTGTGACTGCAGGGACTGCTCAGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS GCA 72 bp CTGGAGGAGCAGATCATCCAGAGCCACGTAGGAGTGTaGCACGCCTGCGGCCACTGCCTCAAACACCACCCT +
Preference number: 6 (lower is better)
Translates to: LEEQIIQSHVGV*HACGHCLKHHP
Trigger: AGGGTGGTGTTTGAGGCAGTGGCCGCAGGCGTGGCACACTCCTACGTGGCTCTGGATGATCTGCTCCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317446.7
ENST00000445819.5
CDS CCA 72 bp GCTAGGCGCAGAGTCCCAATCTGGGGCCCATGGAGGTaGTACCAGAAGCTGAGACACTCCGTGGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: ARRRVPIWGPWR*YQKLRHSVGAA
Trigger: AGCAGCACCCACGGAGTGTCTCAGCTTCTGGTACCACCTCCATGGGCCCCAGATTGGGACTCTGCGCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 72 bp GCTGCATGTGTCCCGCTCAAAGTTACAGGAGACCTCTaGGGGTGGGGCCAGGTGGCGTCACACACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: AACVPLKVTGDL*GWGQVASHTFS
Trigger: GGAGAAGGTGTGTGACGCCACCTGGCCCCACCCCCAGAGGTCTCCTGTAACTTTGAGCGGGACACATGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS TCA 72 bp CAGGCTGTGGAGGATCACGCCGTCATTCATTCGTCCTaGGCAGCCAGGTGCTGTCCGGTGCCAGATACAGGG +
Preference number: 6 (lower is better)
Translates to: QAVEDHAVIHSS*AARCCPVPDTG
Trigger: CCCTGTATCTGGCACCGGACAGCACCTGGCTGCTCAGGACGAATGAATGACGGCGTGATCCTCCACAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS GCA 72 bp CGTGGTAACCACACTGGGCCTCATCTGAGCAGTCCCTaGAGTCACACACGAAGTTGCACACGGCCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: RGNHTGPHLSSP*SHTRSCTRPGQ
Trigger: CTGGCCAGGCCGTGTGCAACTTCGTGTGTGACTGCAGGGACTGCTCAGATGAGGCCCAGTGTGGTTACCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 72 bp CTCATGGCTAGGCGCAGAGTCCCAATCTGGGGCCCATaGAGGTGGTACCAGAAGCTGAGACACTCCGTGGGT +
Preference number: 6 (lower is better)
Translates to: LMARRRVPIWGP*RWYQKLRHSVG
Trigger: ACCCACGGAGTGTCTCAGCTTCTGGTACCACCTCCATGGGCCCCAGATTGGGACTCTGCGCCTAGCCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5
CDS CCA 72 bp GAGCACCCAGGGGCTGGCCAGGGAACTTGCGGAGTGTaGCGGTACCTCGGGGCTGGCTCTGTAAATAATAAG +
Preference number: 6 (lower is better)
Translates to: EHPGAGQGTCGV*RYLGAGSVNNK
Trigger: CTTATTATTTACAGAGCCAGCCCCGAGGTACCGCCACACTCCGCAAGTTCCCTGGCCAGCCCCTGGGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481327.1
CDS CCA 72 bp GTGAGGATGGGCAGCAGGAACCTCTGTCTCTCTCGGTaGTCACTGTGGGGCTACAGTCCCTCAGGGTCACGT +
Preference number: 6 (lower is better)
Translates to: VRMGSRNLCLSR*SLWGYSPSGSR
Trigger: ACGTGACCCTGAGGGACTGTAGCCCCACAGTGACCACCGAGAGAGACAGAGGTTCCTGCTGCCCATCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485732.5
CDS TCA 72 bp CCAGAGACCTTGGCCTCCAGGGGAGAAGCCGCAGTCTaGGTCCTCAAAGGAGCAGTAATTAGGGGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PETLASRGEAAV*VLKGAVIRGPA
Trigger: TGCTGGGCCCCTAATTACTGCTCCTTTGAGGACTCAGACTGCGGCTTCTCCCCTGGAGGCCAAGGTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000479475.1
ENST00000485732.5
CDS CCA 72 bp ACTCTAGGTCATCTAGAGCCACAGCGCCCCTGTGGGTaGCATTTCGGGTGGCAGAGAAGGTCACTCGGAAGT +
Preference number: 6 (lower is better)
Translates to: TLGHLEPQRPCG*HFGWQRRSLGS
Trigger: ACTTCCGAGTGACCTTCTCTGCCACCCGAAATGCCACCCACAGGGGCGCTGTGGCTCTAGATGACCTAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317446.7
ENST00000445819.5
ENST00000485732.5