RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MALT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172175

Ensembl transcript IDs: ENST00000345724.7, ENST00000589873.5, ENST00000591792.1, ENST00000648670.1, ENST00000649125.1, ENST00000649202.1, ENST00000649217.2, ENST00000650045.1, ENST00000650355.1

Found 487 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTTCCTGCTTCAGTCTCATAGAGAAATGACTGGAGGGTGGAAATaGCAGGGGCAATTCTGTGTAGTACAAGAAGCTCTGGCTCCGGGG +
Preference number: 1 (lower is better)
Translates to: AFLLQSHREMTGGWK*QGQFCVVQEALAPG
Trigger: CCCCGGAGCCAGAGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTCTCTATGAGACTGAAGCAGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR CCA 90 bp TGCTCTGCCTTCCTGCTTCAGTCTCATAGAGAAATGACTGGAGGGTaGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTCTGGCT +
Preference number: 1 (lower is better)
Translates to: CSAFLLQSHREMTGG*KWQGQFCVVQEALA
Trigger: AGCCAGAGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTCTCTATGAGACTGAAGCAGGAAGGCAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 90 bp CTTCTGCTCCTTGACACGTGGCATATCCAAACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGATTGGAATGGTATCATCGTAGTCAT +
Preference number: 1 (lower is better)
Translates to: LLLLDTWHIQTQYWR*LLVHPRLEWYHRSH
Trigger: ATGACTACGATGATACCATTCCAATCTTGGATGCACTAAAAGTCACCGCCAATATTGTGTTTGGATATGCCACGTGTCAAGGAGCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR GCA 90 bp TGGTATAGAGGCAATGCTTGGGAAGATCCTTTGATACCAAGTAGCTaGCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAA +
Preference number: 1 (lower is better)
Translates to: WYRGNAWEDPLIPSS*QFLQVCLYLHLLDQ
Trigger: TTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGCATTGCCTCTATACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR CCA 90 bp TTGATATCCGTGGCACTTTTGCAGTCATTTGTGGATATGTGTAAATaGGTGAAAAATTTGAGTCACCCAGTACACATGTTCCCAGCTGAG +
Preference number: 1 (lower is better)
Translates to: LISVALLQSFVDMCK*VKNLSHPVHMFPAE
Trigger: CTCAGCTGGGAACATGTGTACTGGGTGACTCAAATTTTTCACCCATTTACACATATCCACAAATGACTGCAAAAGTGCCACGGATATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 90 bp GCCTACAGGTATAGCTTTAAGAATGCCAGATTTAAAGCACAAGGTTaGTGGGTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGG +
Preference number: 1 (lower is better)
Translates to: AYRYSFKNARFKAQG*WVDAFQNAGTLEEW
Trigger: CCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAACCCATCAACCTTGTGCTTTAAATCTGGCATTCTTAAAGCTATACCTGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 90 bp CCAGAAATGTATGGGTTTATTTCTGGATGTTCAGTTCCATTCCTCTaGTCGATATGTCTATCCATATGCCTACACTGTCTTATTGTAGCT +
Preference number: 1 (lower is better)
Translates to: PEMYGFISGCSVPFL*SICLSICLHCLIVA
Trigger: AGCTACAATAAGACAGTGTAGGCATATGGATAGACATATCGATCAGAGGAATGGAACTGAACATCCAGAAATAAACCCATACATTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 90 bp ACTCCTTCTCTATTGATGGTATTGGCATCCTTGTTGAAAACAAGTTaGCCAGAAATGTATGGGTTTATTTCTGGATGTTCAGTTCCATTC +
Preference number: 1 (lower is better)
Translates to: TPSLLMVLASLLKTS*PEMYGFISGCSVPF
Trigger: GAATGGAACTGAACATCCAGAAATAAACCCATACATTTCTGGTCAACTTGTTTTCAACAAGGATGCCAATACCATCAATAGAGAAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 90 bp AGAAAATATCCCCTCTCAGCATCAAGTATTGGCTTTGAATTTGGGTaGGCCTTTACTTGCTCAAACCTCCACTATCCTAATTTCTTTATT +
Preference number: 1 (lower is better)
Translates to: RKYPLSASSIGFEFG*AFTCSNLHYPNFFI
Trigger: AATAAAGAAATTAGGATAGTGGAGGTTTGAGCAAGTAAAGGCTCACCCAAATTCAAAGCCAATACTTGATGCTGAGAGGGGATATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 90 bp TTCACTTCCTGCTTGTCCTCTACAGTATCTTCCAATCCTGAGTACTaGTATGATAAACATACTGTGAAGACTAGATGTTCCTTTAATTTT +
Preference number: 1 (lower is better)
Translates to: FTSCLSSTVSSNPEY*YDKHTVKTRCSFNF
Trigger: AAAATTAAAGGAACATCTAGTCTTCACAGTATGTTTATCATATCAGTACTCAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGCCCACTTCAGCCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 2 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWPTSAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGGG...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGCTGAGACTATGTCGCTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWLRLCR*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGCGACATAGTCTCAG...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGTAACCTCTGCCTTCTaGGCTCAAGCGATCGTCCCA +
Preference number: 2 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWVTSAF*AQAIVP
Trigger: TGGGACGATCGCTTGAGCCCAGAAGGCAGAGGTTAC...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGATTTTTCTCCCATTCTaGGGGTTAACTTCACTTTCT +
Preference number: 2 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWIFLPF*GLTSLS
Trigger: AGAAAGTGAAGTTAACCCTCAGAATGGGAGAAAAAT...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR TCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGTTTAAAGCACAAGGTTaGTGGGTTGATGCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEFKAQG*WVDAFQ
Trigger: TTGAAAAGCATCAACCCATCAACCTTGTGCTTTAAA...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGCAAAGTCCTGAAGTTTaGTATGAAACAGTTACTACT +
Preference number: 2 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEQSPEV*YETVTT
Trigger: AGTAGTAACTGTTTCATAGCAAACTTCAGGACTTTG...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGGTGGATATGTGTAAATaGGTGAAAAATTTGAGTCAC +
Preference number: 2 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEVDMCK*VKNLSH
Trigger: GTGACTCAAATTTTTCACCCATTTACACATATCCAC...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTCCGGGGCCAGCTGGATaGGGTTTGAATTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAPGPAG*GLNFSS
Trigger: AGAGCTGAAATTCAAACCCCATCCAGCTGGCCCCGG...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR TCA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTATGCCCTGCTCCTCCTaGGGTGGCTGCAGAACTCTG +
Preference number: 2 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSMPCSS*GGCRTL
Trigger: CAGAGTTCTGCAGCCACCTCAGGAGGAGCAGGGCAT...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR TCA 90 bp CCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTAAAACAGTTCCTGGGTaGCAGGTGAACCAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: PWPTVDSAQEIQQNILFPKTVPG*QVNQRL
Trigger: CAGCCTTTGGTTCACCTGTCACCCAGGAACTGTTTT...AGGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR TCA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCAAAGCTTCTGCTCCTTaGCACGTGGCATATCCAAAC +
Preference number: 2 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPKASAP*HVAYPN
Trigger: GTTTGGATATGCCACGTGTCAAGGAGCAGAAGCTTT...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR TCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTCAGCTGGATGGGGTTTaGATTTCAGCTCTGACACCT +
Preference number: 2 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAQLDGV*ISALTP
Trigger: AGGTGTCAGAGCTGAAATTCAAACCCCATCCAGCTG...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTGGCAGAATTCAACAATaGAGCCATCTAGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAGRIQQ*SHLGLG
Trigger: TCCCAGGCCTAGATGGCTGCATTGTTGAATTCTGCC...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR TCA 90 bp GGTGGCTGCAGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTTGAAAGCATTCCTGGGTGACAGGTaGACCAAAGGCTGGTCAGTT +
Preference number: 2 (lower is better)
Translates to: GGCRTLVRTIRHKTSLKAFLGDR*TKGWSV
Trigger: AACTGACCAGCCTTTGGTTCACCTGTCACCCAGGAA...TGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCTGCAGCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR TCA 90 bp ATTAGACATAAGACAAGTTTGAAAGCAAGTCTTCCTTCCCAAACCTCGATGCATCCACCAAAGGAGCTTTaGGCTTGGGGTGCTCCCGGT +
Preference number: 2 (lower is better)
Translates to: IRHKTSLKASLPSQTSMHPPKEL*AWGAPG
Trigger: ACCGGGAGCACCCCAAGCTCAAAGCTCCTTTGGTGG...ATGCATCGAGGTTTGGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR TCA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCCATCAACGGGGACCATaGAGCTGTTCCCAAAATTTT +
Preference number: 2 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPHQRGP*SCSQNF
Trigger: AAAATTTTGGGAACAGCTTCATGGTCCCCGTTGATG...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR GCA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTTAATTCATCTTCAGTaGACTCCACTGCCTCATCTG +
Preference number: 2 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPLIHLQ*TPLPHL
Trigger: CAGATGAGGCAGTGGAGTGCACTGAAGATGAATTAA...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR CCA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCCTGCTCCTTGACACGTaGCATATCCAAACACAATAT +
Preference number: 2 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPLLLDT*HIQTQY
Trigger: ATATTGTGTTTGGATATGCCACGTGTCAAGGAGCAG...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR TCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCACAGTGAAACCACTTTaGAGTCCAGCTGTCTCAGTA +
Preference number: 2 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSTVKPL*SPAVSV
Trigger: TACTGAGACAGCTGGACTTCAAAGTGGTTTCACTGT...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR TCA 90 bp CCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTAGTAAGATCCAACAGTaGAACCACTTTGAAGTCCAG +
Preference number: 2 (lower is better)
Translates to: PWPTVDSAQEIQQNILFPSKIQQ*NHFEVQ
Trigger: CTGGACTTCAAAGTGGTTTCACTGTTGGATCTTACT...AGGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR GCA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGCCAACATTCACTTCCTaGTTGTCCTCTACAGTATCT +
Preference number: 2 (lower is better)
Translates to: PAAMTAICWCNITWITRMPTFTS*LSSTVS
Trigger: AGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGG...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR CCA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGCTGCTCCTTGACACGTaGCATATCCAAACACAATAT +
Preference number: 2 (lower is better)
Translates to: PAAMTAICWCNITWITRMLLLDT*HIQTQY
Trigger: ATATTGTGTTTGGATATGCCACGTGTCAAGGAGCAG...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR CCA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTGAAGTTCATGAGCCTTaGCCCACTGTAGATTCCGCA +
Preference number: 2 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSEVHEP*PTVDSA
Trigger: TGCGGAATCTACAGTGGGCCAAGGCTCATGAACTTC...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR CAA 90 bp GCTGCACAGGACACCTCACTGTTACTTCATGTGCAAGTCAGAGATTaGAAAAGAGGCATTAGAGATGGGGGAAGAAGGCAATGTCTAAAT +
Preference number: 2 (lower is better)
Translates to: AAQDTSLLLHVQVRD*KRGIRDGGRRQCLN
Trigger: ATTTAGACATTGCCTTCTTCCCCCATCTCTAATGCCTCTTTTCAAATCTCTGACTTGCACATGAAGTAACAGTGAGGTGTCCTGTGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR TCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGGATGCTGCAGTGAGCTaGGACTATGTCGCTGCACTC +
Preference number: 2 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLDAAVS*DYVAAL
Trigger: GAGTGCAGCGACATAGTCTCAGCTCACTGCAGCATC...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp AAGTCCAGCTGTCTCAGTAAGTTAGTCAATTCGTACACATCCACCAAAGGAGCTTTCAGTGCACTCCACTaGCTCATCTGTTCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: KSSCLSKLVNSYTSTKGAFSALH*LICSSY
Trigger: ATAGGAAGAACAGATGAGGCAGTGGAGTGCACTGAA...AGCTCCTTTGGTGGATGTGTACGAATTGACTAACTTACTGAGACAGCTGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR CCA 90 bp CCTCGATGCATGTCTAATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTGCAGACCTATATGGATTTaGAGCATCAACGGGGACCAT +
Preference number: 2 (lower is better)
Translates to: PRCMSNLAMRGFPTFTSCRPIWI*SINGDH
Trigger: ATGGTCCCCGTTGATGCTCCAAATCCATATAGGTCT...GCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATTAGACATGCATCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR CCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATCTGCTCCTCCTGAGGTaGCTGCAGAACTCTGGTAAG +
Preference number: 2 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNLLLLR*LQNSGK
Trigger: CTTACCAGAGTTCTGCAGCCACCTCAGGAGGAGCAG...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650045.1
3UTR-3UTR TCA 90 bp CCTCGATGCATGTCTAATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTGCACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGA +
Preference number: 2 (lower is better)
Translates to: PRCMSNLAMRGFPTFTSCTQYWR*LLVHPR
Trigger: TCTTGGATGCACTAAAAGTCACCGCCAATATTGTGT...GCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATTAGACATGCATCGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR GCA 90 bp GAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCAATCCTGGATAAAATTAGGTTATaGCTGGTGATCGGCAAGGTT +
Preference number: 2 (lower is better)
Translates to: EVSQHSLPACPLQYLPILDKIRL*LVIGKV
Trigger: AACCTTGCCGATCACCAGGCATAACCTAATTTTATC...CAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
3UTR-3UTR TCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTGTAAGGGCTGAAACCTaGGGTGTCTCAGACTCCTTC +
Preference number: 2 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVVRAET*GVSDSF
Trigger: GAAGGAGTCTGAGACACCTCAGGTTTCAGCCCTTAC...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp GATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATGATTTCAAAAGCTTCTaGTCCTTGACACGTGGCATA +
Preference number: 2 (lower is better)
Translates to: DPLIPSSCQFLQVCLYLHDFKSF*SLTRGI
Trigger: TATGCCACGTGTCAAGGAGCAGAAGCTTTTGAAATC...ATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR CCA 90 bp GATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATAAGACACATACTTTCTaGAAGTTCATGAGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: DPLIPSSCQFLQVCLYLHKTHTF*KFMSLG
Trigger: GCCAAGGCTCATGAACTTCCAGAAAGTATGTGTCTT...ATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR CCA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTAAGACACATACTTTCTaGAAGTTCATGAGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSKTHTF*KFMSLG
Trigger: GCCAAGGCTCATGAACTTCCAGAAAGTATGTGTCTT...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR CAA 90 bp GCATTACGCATCTCATATTCAGTAAGATCCAACAGTGAAACCACTTaGAAGTCCAGCTGTCTCAGTAAGTTAGTCAATTCGTACACATCC +
Preference number: 2 (lower is better)
Translates to: ALRISYSVRSNSETT*KSSCLSKLVNSYTS
Trigger: GGATGTGTACGAATTGACTAACTTACTGAGACAGCTGGACTTCAAAGTGGTTTCACTGTTGGATCTTACTGAATATGAGATGCGTAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR CAA 90 bp CTTCCAGAAAATATCCCCTCTCAGCATCAAGTATTGGCTTTGAATTaGGGTGAGCCTTTACTTGCTCAAACCTCCACTATCCTAATTTCT +
Preference number: 2 (lower is better)
Translates to: LPENIPSQHQVLALN*GEPLLAQTSTILIS
Trigger: AGAAATTAGGATAGTGGAGGTTTGAGCAAGTAAAGGCTCACCCAAATTCAAAGCCAATACTTGATGCTGAGAGGGGATATTTTCTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR TCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAATTAGGTTATGCCTGGTaGTCGGCAAGGTTCTTTCTG +
Preference number: 2 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNELGYAW*SARFFL
Trigger: CAGAAAGAACCTTGCCGATCACCAGGCATAACCTAA...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
3UTR-3UTR GCA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTCTTCCCAAACCTCGATaGATGTCTAATTTAGCAATG +
Preference number: 2 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSLPKPR*MSNLAM
Trigger: CATTGCTAAATTAGACATGCATCGAGGTTTGGGAAG...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR TCA 90 bp GCTTGTCCTCTACAGTATCTTCCAATCCTGAGTACTGATATGATAAACATACTGACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGA +
Preference number: 2 (lower is better)
Translates to: ACPLQYLPILSTDMINILTQYWR*LLVHPR
Trigger: TCTTGGATGCACTAAAAGTCACCGCCAATATTGTGT...CAGTATGTTTATCATATCAGTACTCAGGATTGGAAGATACTGTAGAGGACAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR GCA 90 bp CTGTTTGCCTTTGGTAAGGTGACACTTACCCATATCTTCTGCAACTTCATCCAGCAAAGTCCTGAAGTTTaGTATGAAACAGTTACTACT +
Preference number: 2 (lower is better)
Translates to: LFAFGKVTLTHIFCNFIQQSPEV*YETVTT
Trigger: AGTAGTAACTGTTTCATAGCAAACTTCAGGACTTTG...CTGGATGAAGTTGCAGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
3UTR-3UTR CCA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATATTTTCAGACCTATATaGATTTGGAGCATCAACGGG +
Preference number: 2 (lower is better)
Translates to: QVAASFFRCAFICIFWINIFRPI*IWSING
Trigger: CCCGTTGATGCTCCAAATCCATATAGGTCTGAAAAT...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR CCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGACTGGAATAGATTTCTaGAGGTCTCAGTTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLTGIDF*RSQFWC
Trigger: GCACCAGAACTGAGACCTCCAGAAATCTATTCCAGT...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAAACTGGAATAGATTTCTaGAGGTCTCAGTTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNETGIDF*RSQFWC
Trigger: GCACCAGAACTGAGACCTCCAGAAATCTATTCCAGT...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
3UTR-3UTR TCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTCAAGTTAACGCTCTTTaGGCCACGCTATTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVQVNAL*ATLLVR
Trigger: CCTTACTAATAGCGTGGCTCAAAGAGCGTTAACTTG...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTGATGCTCTGCCTTCCTaGTTCAGTCTCATAGAGAAA +
Preference number: 2 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVDALPS*FSLIEK
Trigger: TTTCTCTATGAGACTGAAGCAGGAAGGCAGAGCATC...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTAACAAGATGATGCTCTaGCTTCCTGCTTCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVNKMML*LPASVS
Trigger: TGAGACTGAAGCAGGAAGGCAGAGCATCATCTTGTT...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp ATTAGACATAAGACAAGTTTGAAAGCAAGTCTTCCTTCCCAAACCTCGATGCATATTTCTCCAAACATCTaGTTCGGCTACTCATTCCAT +
Preference number: 2 (lower is better)
Translates to: IRHKTSLKASLPSQTSMHISPNI*FGYSFH
Trigger: ATGGAATGAGTAGCCGAAGCAGATGTTTGGAGAAAT...ATGCATCGAGGTTTGGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
3UTR CAA 90 bp CACTCCTTCTCTATTGATGGTATTGGCATCCTTGTTGAAAACAAGTaGACCAGAAATGTATGGGTTTATTTCTGGATGTTCAGTTCCATT +
Preference number: 2 (lower is better)
Translates to: HSFSIDGIGILVENK*TRNVWVYFWMFSSI
Trigger: AATGGAACTGAACATCCAGAAATAAACCCATACATTTCTGGTCAACTTGTTTTCAACAAGGATGCCAATACCATCAATAGAGAAGGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR TCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTCTTCAAGTACAATGCTaGATAGAAGTAGTGCCGAGT +
Preference number: 2 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVLQVQC*IEVVPS
Trigger: ACTCGGCACTACTTCTATTCAGCATTGTACTTGAAG...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR TCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGTCAGTTCCATTCCTCTaGTCGATATGTCTATCCATA +
Preference number: 2 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLSVPFL*SICLSI
Trigger: TATGGATAGACATATCGATCAGAGGAATGGAACTGA...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGGATAAAATTAGGTTATaGCTGGTGATCGGCAAGGTT +
Preference number: 2 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLDKIRL*LVIGKV
Trigger: AACCTTGCCGATCACCAGGCATAACCTAATTTTATC...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR TCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGTTCAGTCTATCACCATaGAGTATAATGTTAGGTGTG +
Preference number: 2 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLFSLSP*SIMLGV
Trigger: CACACCTAACATTATACTTCATGGTGATAGACTGAA...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR GCA 90 bp GCTTGTCCTCTACAGTATCTTCCAATCCTGAGTACTGATATGATAAACATACTGTGTTCCTTTAATTTTTaGAGTGAACTGAGTCTGGTA +
Preference number: 2 (lower is better)
Translates to: ACPLQYLPILSTDMINILCSFNF*SELSLV
Trigger: TACCAGACTCAGTTCACTGCAAAAATTAAAGGAACA...CAGTATGTTTATCATATCAGTACTCAGGATTGGAAGATACTGTAGAGGACAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR CCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGGTATGGGTTTATTTCTaGATGTTCAGTTCCATTCCT +
Preference number: 2 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLVWVYF*MFSSIP
Trigger: AGGAATGGAACTGAACATCCAGAAATAAACCCATAC...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CAA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGTGGGTGAGCCTTTACTaGCTCAAACCTCCACTATCC +
Preference number: 3 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEWVSLY*LKPPLS
Trigger: GGATAGTGGAGGTTTGAGCAAGTAAAGGCTCACCCA...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CAA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGCTTGAAGACAGGTGTTaGAGACCAGCATGGGCAACA +
Preference number: 3 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWLEDRC*RPAWAT
Trigger: TGTTGCCCATGCTGGTCTCAAACACCTGTCTTCAAG...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 72 bp GCGATTCTCCTGTTTCAGCCTCCACGGATGCTGCAGTaGGCTGAGACTATGTCGCTGCACTCCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: AILLFQPPRMLQ*AETMSLHSSLG
Trigger: GCCCAGGCTGGAGTGCAGCGACATAGTCTCAGCTCACTGCAGCATCCGTGGAGGCTGAAACAGGAGAATCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CAA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGACCACTCCTTCTCTATaGATGGTATTGGCATCCTTG +
Preference number: 3 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWTTPSL*MVLASL
Trigger: CAAGGATGCCAATACCATCAATAGAGAAGGAGTGGT...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CAA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGGATGTTGAACCAACCTaGAATTCCTGGGATAAATTC +
Preference number: 3 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEDVEPT*NSWDKF
Trigger: GAATTTATCCCAGGAATTCAAGGTTGGTTCAACATC...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CAA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGCTAATTTGGGCAGCATaGCCATCTTACCAATATTCA +
Preference number: 3 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWLIWAA*PSYQYS
Trigger: TGAATATTGGTAAGATGGCAATGCTGCCCAAATTAG...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR GCA 72 bp TTCATGCGATTCTCCTGTTTCAGCCTCCACGGATGCTaGAGTGAGCTGAGACTATGTCGCTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: FMRFSCFSLHGC*SELRLCRCTPA
Trigger: GGCTGGAGTGCAGCGACATAGTCTCAGCTCACTGCAGCATCCGTGGAGGCTGAAACAGGAGAATCGCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 72 bp CTTCGGCTACTCATTCCATGTCTGGAAGACCAGGACTaGCTAGTGAGCAGAGATCCCAACTCCATGGGTGTT +
Preference number: 3 (lower is better)
Translates to: LRLLIPCLEDQD*LVSRDPNSMGV
Trigger: AACACCCATGGAGTTGGGATCTCTGCTCACTAGTCAGTCCTGGTCTTCCAGACATGGAATGAGTAGCCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
3UTR GCA 72 bp AAATTCATGCGATTCTCCTGTTTCAGCCTCCACGGATaGTGCAGTGAGCTGAGACTATGTCGCTGCACTCCA +
Preference number: 3 (lower is better)
Translates to: KFMRFSCFSLHG*CSELRLCRCTP
Trigger: TGGAGTGCAGCGACATAGTCTCAGCTCACTGCAGCATCCGTGGAGGCTGAAACAGGAGAATCGCATGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CAA 90 bp CCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTCCAAAGGCTGGTCAGTaGTTTGCTCTTTATTATCAG +
Preference number: 3 (lower is better)
Translates to: PWPTVDSAQEIQQNILFPPKAGQ*FALYYQ
Trigger: CTGATAATAAAGAGCAAACAACTGACCAGCCTTTGG...AGGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR CAA 90 bp GATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCAGACCTATATGGATTaGGAGCATCAACGGGGACCA +
Preference number: 3 (lower is better)
Translates to: DPLIPSSCQFLQVCLYLHQTYMD*EHQRGP
Trigger: TGGTCCCCGTTGATGCTCCAAATCCATATAGGTCTG...ATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR CAA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTGCTTGGGAAGATCCTTaGATACCAAGTAGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSAWEDP*IPSSCQ
Trigger: CTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR TCA 72 bp CTTCGAATCTCTAGAGCCTGTTTGCCTTTGGTAAGGTaGCACTTACCCATATCTTCTGCAACTTCATCCAGT +
Preference number: 3 (lower is better)
Translates to: LRISRACLPLVR*HLPISSATSSS
Trigger: ACTGGATGAAGTTGCAGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAAACAGGCTCTAGAGATTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR TCA 72 bp CCCCTCTCAGCATCAAGTATTGGCTTTGAATTTGGGTaGGCCTTTACTTGCTCAAACCTCCACTATCCTAAT +
Preference number: 3 (lower is better)
Translates to: PLSASSIGFEFG*AFTCSNLHYPN
Trigger: ATTAGGATAGTGGAGGTTTGAGCAAGTAAAGGCTCACCCAAATTCAAAGCCAATACTTGATGCTGAGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CAA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGTTGGTCAAGCTGGTCTaGAACTCCTGGGCTCAAGTG +
Preference number: 3 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLLVKLV*NSWAQV
Trigger: CACTTGAGCCCAGGAGTTCAAGACCAGCTTGACCAA...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 72 bp ACACCTCACTGTTACTTCATGTGCAAGTCAGAGATTTaGAAAGAGGCATTAGAGATGGGGGAAGAAGGCAAT +
Preference number: 3 (lower is better)
Translates to: TPHCYFMCKSEI*KEALEMGEEGN
Trigger: ATTGCCTTCTTCCCCCATCTCTAATGCCTCTTTTCAAATCTCTGACTTGCACATGAAGTAACAGTGAGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR CCA 72 bp TTGTACACACAGACAATTTTCAGACCTATATGGATTTaGAGCATCAACGGGGACCATGAAGCTGTTCCCAAA +
Preference number: 3 (lower is better)
Translates to: LYTQTIFRPIWI*SINGDHEAVPK
Trigger: TTTGGGAACAGCTTCATGGTCCCCGTTGATGCTCCAAATCCATATAGGTCTGAAAATTGTCTGTGTGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR-3UTR CAA 90 bp ATTAGACATAAGACAAGTTTGAAAGCAAGTCTTCCTTCCCAAACCTCGATGCATATCAAAAGGGCAACCTaGTCCTTCGCTGTCCAATCT +
Preference number: 3 (lower is better)
Translates to: IRHKTSLKASLPSQTSMHIKRAT*SFAVQS
Trigger: AGATTGGACAGCGAAGGACAAGGTTGCCCTTTTGAT...ATGCATCGAGGTTTGGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR TCA 72 bp CTTGACACGTGGCATATCCAAACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGATTGGAATGGTATCAT +
Preference number: 3 (lower is better)
Translates to: LDTWHIQTQYWR*LLVHPRLEWYH
Trigger: ATGATACCATTCCAATCTTGGATGCACTAAAAGTCACCGCCAATATTGTGTTTGGATATGCCACGTGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR GCA 72 bp AATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTaGTTGTCCTCTACAGTATCTTCCAATCCTGAGTAC +
Preference number: 3 (lower is better)
Translates to: NLAMRGFPTFTS*LSSTVSSNPEY
Trigger: GTACTCAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR CAA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTAGACATAAGACAAGTTaGAAAGCAAGTCTTCCTTCC +
Preference number: 3 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSRHKTS*KASLPS
Trigger: GGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCT...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR CAA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGTTGTCCCAGCACCGTTaGTTGAAAAGACCACTCCTT +
Preference number: 3 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLLSQHR*LKRPLL
Trigger: AAGGAGTGGTCTTTTCAACAAACGGTGCTGGGACAA...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CAA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTCAGGTGTGCCTTTATTaGCATCTTTTGGATCAATAT +
Preference number: 3 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSQVCLY*HLLDQY
Trigger: ATATTGATCCAAAAGATGCAAATAAAGGCACACCTG...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR TCA 72 bp AAACTTGAAATAAATGCATCTGGAGTCCGGCTGCAATaGCAGCTATCTGCTGGTGTAACATTACTTGGATTA +
Preference number: 3 (lower is better)
Translates to: KLEINASGVRLQ*QLSAGVTLLGL
Trigger: TAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGGACTCCAGATGCATTTATTTCAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR-3UTR CAA 90 bp GCTTGTCCTCTACAGTATCTTCCAATCCTGAGTACTGATATGATAAACATACTGTATCCAAACACAATATaGGCGGTGACTTTTAGTGCA +
Preference number: 3 (lower is better)
Translates to: ACPLQYLPILSTDMINILYPNTI*AVTFSA
Trigger: TGCACTAAAAGTCACCGCCAATATTGTGTTTGGATA...CAGTATGTTTATCATATCAGTACTCAGGATTGGAAGATACTGTAGAGGACAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR TCA 72 bp TATGGGTTTATTTCTGGATGTTCAGTTCCATTCCTCTaGTCGATATGTCTATCCATATGCCTACACTGTCTT +
Preference number: 3 (lower is better)
Translates to: YGFISGCSVPFL*SICLSICLHCL
Trigger: AAGACAGTGTAGGCATATGGATAGACATATCGATCAGAGGAATGGAACTGAACATCCAGAAATAAACCCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR-3UTR CAA 90 bp TTCATAAAGATTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTTTAGTGCATCCAAGATaGGAATGGTATCATCGTAGT +
Preference number: 3 (lower is better)
Translates to: FIKIPFANPECWISKASALVHPR*EWYHRS
Trigger: ACTACGATGATACCATTCCAATCTTGGATGCACTAA...AGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAATCTTTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR TCA 72 bp CTATTGATGGTATTGGCATCCTTGTTGAAAACAAGTTaGCCAGAAATGTATGGGTTTATTTCTGGATGTTCA +
Preference number: 3 (lower is better)
Translates to: LLMVLASLLKTS*PEMYGFISGCS
Trigger: TGAACATCCAGAAATAAACCCATACATTTCTGGTCAACTTGTTTTCAACAAGGATGCCAATACCATCAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 72 bp TATAGCTTTAAGAATGCCAGATTTAAAGCACAAGGTTaGTGGGTTGATGCTTTTCAAAATGCTGGCACTTTA +
Preference number: 3 (lower is better)
Translates to: YSFKNARFKAQG*WVDAFQNAGTL
Trigger: TAAAGTGCCAGCATTTTGAAAAGCATCAACCCATCAACCTTGTGCTTTAAATCTGGCATTCTTAAAGCTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR TCA 72 bp CTTCCAATCCTGAGTACTGATATGATAAACATACTGTaGAGACTAGATGTTCCTTTAATTTTTGCAGTGAAC +
Preference number: 3 (lower is better)
Translates to: LPILSTDMINIL*RLDVPLIFAVN
Trigger: GTTCACTGCAAAAATTAAAGGAACATCTAGTCTTCACAGTATGTTTATCATATCAGTACTCAGGATTGGAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGCCACGGATGCTGCAGTaGGCTGAGACTATGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWPRMLQ*AETMSL
Trigger: CAGCGACATAGTCTCAGCTCACTGCAGCATCCGTGG...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGATGCTGCAGTGAGCTaGGACTATGTCGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWDAAVS*DYVAAL
Trigger: GAGTGCAGCGACATAGTCTCAGCTCACTGCAGCATC...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGGTAACCTCTGCCTTCTaGGCTCAAGCGATCGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEVTSAF*AQAIVP
Trigger: TGGGACGATCGCTTGAGCCCAGAAGGCAGAGGTTAC...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGGCAGCAGCAGTACTGTaGACAAAACACCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEAAAVL*TKHPAL
Trigger: CAGAGCCGGGTGTTTTGTCCACAGTACTGCTGCTGC...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGAGGTGTGAGCCACCATaGCCAGGGTTTCAGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWERCEPP*PGFQCQ
Trigger: TTGACACTGAAACCCTGGGCATGGTGGCTCACACCT...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGCAGCTGGATGGGGTTTaGATTTCAGCTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWQLDGV*ISALTP
Trigger: AGGTGTCAGAGCTGAAATTCAAACCCCATCCAGCTG...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGCCTGGGAGACAGAGTaGGACTCAAAAGACAACAAC +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWAWETE*DSKDNN
Trigger: GTTGTTGTCTTTTGAGTCTCACTCTGTCTCCCAGGC...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGTCTCTGGAAGCTCTCTaGGATGTCGCAAACATCCAG +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWSLEAL*DVANIQ
Trigger: CTGGATGTTTGCGACATCCCAGAGAGCTTCCAGAGA...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGCCATCAACACTTCTCTaGAAGCTCTCTGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWPSTLL*KLSGMS
Trigger: CGACATCCCAGAGAGCTTCCAGAGAAGTGTTGATGG...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGCCCCCAACAGCGACATaGCCCTCGCCGGCGACCCCG +
Preference number: 4 (lower is better)
Translates to: PAAMTAICWCNITWITRMPPTAT*PSPATP
Trigger: CGGGGTCGCCGGCGAGGGCCATGTCGCTGTTGGGGG...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGCAAGTTAACGCTCTTTaGGCCACGCTATTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWQVNAL*ATLLVR
Trigger: CCTTACTAATAGCGTGGCTCAAAGAGCGTTAACTTG...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGCCTGGCCAACATGGTaGAACCCTGTTTATTTTAGT +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWAWPTW*NPVYFS
Trigger: ACTAAAATAAACAGGGTTTCACCATGTTGGCCAGGC...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp CCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTGATCCAGGAGCTCGCTaGGCCTCCGCAGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: PWPTVDSAQEIQQNILFPDPGAR*ASAAAA
Trigger: AGCCGCTGCTGCGGAGGCTCAGCGAGCTCCTGGATC...AGGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR TCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGTTGCCTTTGGTAAGGTaGCACTTACCCATATCTTCT +
Preference number: 4 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWELPLVR*HLPISS
Trigger: AGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAA...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGGATTTCAAAAGCTTCTaGTCCTTGACACGTGGCATA +
Preference number: 4 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEDFKSF*SLTRGI
Trigger: TATGCCACGTGTCAAGGAGCAGAAGCTTTTGAAATC...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGTTAATTCATCTTCAGTaGACTCCACTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWELIHLQ*TPLPHL
Trigger: CAGATGAGGCAGTGGAGTGCACTGAAGATGAATTAA...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGCTGCTCCTTGACACGTaGCATATCCAAACACAATAT +
Preference number: 4 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWELLLDT*HIQTQY
Trigger: ATATTGTGTTTGGATATGCCACGTGTCAAGGAGCAG...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGAAGACACATACTTTCTaGAAGTTCATGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEKTHTF*KFMSLG
Trigger: GCCAAGGCTCATGAACTTCCAGAAAGTATGTGTCTT...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGTTCAGTCTATCACCATaGAGTATAATGTTAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWFSLSP*SIMLGV
Trigger: CACACCTAACATTATACTTCATGGTGATAGACTGAA...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGTTTAAAGCACAAGGTTaGTGGGTTGATGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWFKAQG*WVDAFQ
Trigger: TTGAAAAGCATCAACCCATCAACCTTGTGCTTTAAA...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGATATGTAGACTAATTTaGGCAGCATTGCCATCTTAC +
Preference number: 4 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWEICRLI*AALPSY
Trigger: GTAAGATGGCAATGCTGCCCAAATTAGTCTACATAT...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACGGCCCTCGGGCGCCTaGTCCAGGAGCTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQARPSGA*SRSSLS
Trigger: GCTCAGCGAGCTCCTGGATCAGGCGCCCGAGGGCCG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAACGGCCCTCGGGCGCCTaGTCCAGGAGCTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNERPSGA*SRSSLS
Trigger: GCTCAGCGAGCTCCTGGATCAGGCGCCCGAGGGCCG...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCAATCCTGCCACCAAAGGAGCTTTaGGCTTGGGGTGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: EVSQHSLPACPLQYLPILPPKEL*AWGAPG
Trigger: ACCGGGAGCACCCCAAGCTCAAAGCTCCTTTGGTGG...CAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACCCCCAACAGCGACATaGCCCTCGCCGGCGACCCCG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAPPTAT*PSPATP
Trigger: CGGGGTCGCCGGCGAGGGCCATGTCGCTGTTGGGGG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATCCCCCAACAGCGACATaGCCCTCGCCGGCGACCCCG +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNPPTAT*PSPATP
Trigger: CGGGGTCGCCGGCGAGGGCCATGTCGCTGTTGGGGG...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp CCTCGATGCATGTCTAATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTGCATGCCCTGCTCCTCCTaGGGTGGCTGCAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: PRCMSNLAMRGFPTFTSCMPCSS*GGCRTL
Trigger: CAGAGTTCTGCAGCCACCTCAGGAGGAGCAGGGCAT...GCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATTAGACATGCATCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTCTGGAAGACCAGGACTaGCTAGTGAGCAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: AWEDPLIPSSCQFLQVCLLEDQD*LVSRDP
Trigger: GGGATCTCTGCTCACTAGTCAGTCCTGGTCTTCCAG...AAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGATCCAGGAGCTCGCTaGGCCTCCGCAGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQADPGAR*ASAAAA
Trigger: AGCCGCTGCTGCGGAGGCTCAGCGAGCTCCTGGATC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAAGATCCAGGAGCTCGCTaGGCCTCCGCAGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNEDPGAR*ASAAAA
Trigger: AGCCGCTGCTGCGGAGGCTCAGCGAGCTCCTGGATC...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCGAATGGGTCTTGCAATaGGTGATAATGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPEWVLQ*VIMPCS
Trigger: GGAGCAGGGCATTATCACTCATTGCAAGACCCATTC...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTGTAAGGGCTGAAACCTaGGGTGTCTCAGACTCCTTC +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAVRAET*GVSDSF
Trigger: GAAGGAGTCTGAGACACCTCAGGTTTCAGCCCTTAC...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp GCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTCATCTGGAGTCCGGCTaGAATGACAGCTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: AWEDPLIPSSCQFLQVCLHLESG*NDSYLL
Trigger: CAGCAGATAGCTGTCATTGCAGCCGGACTCCAGATG...AAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAACCACCAAAGGAGCTTTaGGCTTGGGGTGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVEPPKEL*AWGAPG
Trigger: ACCGGGAGCACCCCAAGCTCAAAGCTCCTTTGGTGG...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTGAATGGGTCTTGCAATaGGTGATAATGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAEWVLQ*VIMPCS
Trigger: GGAGCAGGGCATTATCACTCATTGCAAGACCCATTC...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCCATCTGGAGTCCGGCTaGAATGACAGCTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSHLESG*NDSYLL
Trigger: CAGCAGATAGCTGTCATTGCAGCCGGACTCCAGATG...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTGAAGTTCATGAGCCTTaGCCCACTGTAGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAEVHEP*PTVDSA
Trigger: TGCGGAATCTACAGTGGGCCAAGGCTCATGAACTTC...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GGTGGCTGCAGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTTGAAAGCACTGCTCCTCCTGAGGTaGCTGCAGAACTCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: GGCRTLVRTIRHKTSLKALLLLR*LQNSGK
Trigger: CTTACCAGAGTTCTGCAGCCACCTCAGGAGGAGCAG...TGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCTGCAGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCACAGTGAAACCACTTTaGAGTCCAGCTGTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPTVKPL*SPAVSV
Trigger: TACTGAGACAGCTGGACTTCAAAGTGGTTTCACTGT...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GCTACTCATTCCATGTCTGGAAGACCAGGACTGACTAGTGAGCAGAGATCCCAAACAGTGAAACCACTTTaGAGTCCAGCTGTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: ATHSMSGRPGLTSEQRSQTVKPL*SPAVSV
Trigger: TACTGAGACAGCTGGACTTCAAAGTGGTTTCACTGT...TTGGGATCTCTGCTCACTAGTCAGTCCTGGTCTTCCAGACATGGAATGAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR TCA 90 bp CCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTAAAGCTTCTGCTCCTTaGCACGTGGCATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: PWPTVDSAQEIQQNILFPKASAP*HVAYPN
Trigger: GTTTGGATATGCCACGTGTCAAGGAGCAGAAGCTTT...AGGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp GCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTACCTTAAGAGAACACTaGTCCAGGTCTAGGCAACTG +
Preference number: 4 (lower is better)
Translates to: AWEDPLIPSSCQFLQVCLTLREH*SRSRQL
Trigger: CAGTTGCCTAGACCTGGAGCAGTGTTCTCTTAAGGT...AAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR GCA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGGTAAAACCAATGTGCTaGCTGGCATCAGCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PAAMTAICWCNITWITRMVKPMC*LASAFG
Trigger: CCCAAAAGCTGATGCCAGGCAGCACATTGGTTTTAC...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR GCA 90 bp GCTACTCATTCCATGTCTGGAAGACCAGGACTGACTAGTGAGCAGAGATCCCAATTGATACCAAGTAGCTaGCAGTTTCTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: ATHSMSGRPGLTSEQRSQLIPSS*QFLQVC
Trigger: GCACACCTGAAGAAACTGGCAGCTACTTGGTATCAA...TTGGGATCTCTGCTCACTAGTCAGTCCTGGTCTTCCAGACATGGAATGAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR GCA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTTCAGTGCACTCCACTaGCTCATCTGTTCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPFSALH*LICSSY
Trigger: ATAGGAAGAACAGATGAGGCAGTGGAGTGCACTGAA...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGGCGGAAGAACAAATCTaGCAGCGCGGCACGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLAEEQI*QRGTAL
Trigger: GAGGGCCGTGCCGCGCTGCCAGATTTGTTCTTCCGC...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCACTCTGGAAGCTCTCTaGGATGTCGCAAACATCCAG +
Preference number: 4 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSTLEAL*DVANIQ
Trigger: CTGGATGTTTGCGACATCCCAGAGAGCTTCCAGAGT...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS-3UTR CCA 90 bp CCTCGATGCATGTCTAATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTGCCCACATAAGGCACTCTaGAAGCTCTCTGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: PRCMSNLAMRGFPTFTSCPHKAL*KLSGMS
Trigger: CGACATCCCAGAGAGCTTCCAGAGTGCCTTATGTGG...GCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATTAGACATGCATCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACCACCAAAGGAGCTTTaGGCTTGGGGTGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAPPKEL*AWGAPG
Trigger: ACCGGGAGCACCCCAAGCTCAAAGCTCCTTTGGTGG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPTQYWR*LLVHPR
Trigger: TCTTGGATGCACTAAAAGTCACCGCCAATATTGTGT...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAATGCCCTGCTCCTCCTaGGGTGGCTGCAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAMPCSS*GGCRTL
Trigger: CAGAGTTCTGCAGCCACCTCAGGAGGAGCAGGGCAT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATGGAGTCCGGCTGCAATaGCAGCTATCTGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: QVAASFFRCAFICIFWINGVRLQ*QLSAGV
Trigger: TACACCAGCAGATAGCTGTCATTGCAGCCGGACTCC...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp GAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCAATCCTGAAAAGGATGTCCAGTTaGCCGGCAACACAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: EVSQHSLPACPLQYLPILKRMSS*PATQFH
Trigger: GTGAAACTGTGTTGCCGGGCAACTGGACATCCTTTT...CAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp AAGTCCAGCTGTCTCAGTAAGTTAGTCAATTCGTACACATCCACCAAAGGAGCTGAAGTTCATGAGCCTTaGCCCACTGTAGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: KSSCLSKLVNSYTSTKGAEVHEP*PTVDSA
Trigger: TGCGGAATCTACAGTGGGCCAAGGCTCATGAACTTC...AGCTCCTTTGGTGGATGTGTACGAATTGACTAACTTACTGAGACAGCTGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS-3UTR CCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAACTGCTCCTCCTGAGGTaGCTGCAGAACTCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVELLLLR*LQNSGK
Trigger: CTTACCAGAGTTCTGCAGCCACCTCAGGAGGAGCAG...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTAGTAAGATCCAACAGTaGAACCACTTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: AWEDPLIPSSCQFLQVCLSKIQQ*NHFEVQ
Trigger: CTGGACTTCAAAGTGGTTTCACTGTTGGATCTTACT...AAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGTTGCCTTTGGTAAGGTaGCACTTACCCATATCTTCT +
Preference number: 4 (lower is better)
Translates to: PAAMTAICWCNITWITRMLPLVR*HLPISS
Trigger: AGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAA...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGGACATAAGACAAGTTTaGAAGCAAGTCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PAAMTAICWCNITWITRMDIRQV*KQVFLP
Trigger: GGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTC...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTATGCCCTGCTCCTCCTaGGGTGGCTGCAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLMPCSS*GGCRTL
Trigger: CAGAGTTCTGCAGCCACCTCAGGAGGAGCAGGGCAT...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTCAGTCTTCCAATCCATaGACATGGATGTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAQSSNP*TWMSFH
Trigger: ATGGAAAGACATCCATGTTCATGGATTGGAAGACTG...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATTTCCTGGGTGACAGGTaGACCAAAGGCTGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: QVAASFFRCAFICIFWINFLGDR*TKGWSV
Trigger: AACTGACCAGCCTTTGGTTCACCTGTCACCCAGGAA...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS-3UTR GCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTCCAACATTCACTTCCTaGTTGTCCTCTACAGTATCT +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAPTFTS*LSSTVS
Trigger: AGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGG...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGGCAATGACAGCTATCTaGTGGTGTAACATTACTTGG +
Preference number: 4 (lower is better)
Translates to: PAAMTAICWCNITWITRMAMTAI*WCNITW
Trigger: CCAAGTAATGTTACACCAGCAGATAGCTGTCATTGC...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGTTAATTCATCTTCAGTaGACTCCACTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PAAMTAICWCNITWITRMLIHLQ*TPLPHL
Trigger: CAGATGAGGCAGTGGAGTGCACTGAAGATGAATTAA...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTTCACTGGACAGTGCTaGTCGGTGGTAACCACAGCT +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVFTGQC*SVVTTA
Trigger: AGCTGTGGTTACCACCGAGCAGCACTGTCCAGTGAA...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAACTGAGACTATGTCGCTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNELRLCR*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGCGACATAGTCTCAG...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAATCGTCCAGGCTGGAGTaGAGTGGCACAATCTCTACT +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVESSRLE*SGTIST
Trigger: AGTAGAGATTGTGCCACTGCACTCCAGCCTGGACGA...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATTCTCTGGAAGCTCTCTaGGATGTCGCAAACATCCAG +
Preference number: 4 (lower is better)
Translates to: DPLIPSSCQFLQVCLYLHSLEAL*DVANIQ
Trigger: CTGGATGTTTGCGACATCCCAGAGAGCTTCCAGAGA...ATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CCA 90 bp TATAGAGGCAATGCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCCATCAACACTTCTCTaGAAGCTCTCTGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: YRGNAWEDPLIPSSCQFLPSTLL*KLSGMS
Trigger: CGACATCCCAGAGAGCTTCCAGAGAAGTGTTGATGG...AAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGCATTGCCTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCTCCTTCGCCAAAGGCTaGTCAGTTGTTTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSSFAKG*SVVCSL
Trigger: TAAAGAGCAAACAACTGACCAGCCTTTGGCGAAGGA...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CCA 90 bp GATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATGAAGTTCATGAGCCTTaGCCCACTGTAGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: DPLIPSSCQFLQVCLYLHEVHEP*PTVDSA
Trigger: TGCGGAATCTACAGTGGGCCAAGGCTCATGAACTTC...ATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp GCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTAAGACACATACTTTCTaGAAGTTCATGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AWEDPLIPSSCQFLQVCLKTHTF*KFMSLG
Trigger: GCCAAGGCTCATGAACTTCCAGAAAGTATGTGTCTT...AAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTAAGGCAATGTCTAAATaGACCTTTTCTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAKAMSK*TFSVPG
Trigger: TCCTGGCACAGAAAAGGTCCATTTAGACATTGCCTT...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAACAAAACACCCGGCTCTaGTCTGGGTCTGAATCATCC +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVEQNTRL*SGSESS
Trigger: GGATGATTCAGACCCAGACCAGAGCCGGGTGTTTTG...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TATAGAGGCAATGCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTGCAAACATCCAGCTGTaGCCACTGGCTGAATTCAAA +
Preference number: 4 (lower is better)
Translates to: YRGNAWEDPLIPSSCQFLANIQL*PLAEFK
Trigger: TTTGAATTCAGCCAGTGGTCACAGCTGGATGTTTGC...AAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGCATTGCCTCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp TTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTCCTTGACACGCATCAACGGGGACCATaGAGCTGTTCCCAAAATTTT +
Preference number: 4 (lower is better)
Translates to: FHLPIQNAGFQKLLLLDTHQRGP*SCSQNF
Trigger: AAAATTTTGGGAACAGCTTCATGGTCCCCGTTGATG...CGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCAATCCTGACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: EVSQHSLPACPLQYLPILTQYWR*LLVHPR
Trigger: TCTTGGATGCACTAAAAGTCACCGCCAATATTGTGT...CAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCTTGCCTTTGGTAAGGTaGCACTTACCCATATCTTCT +
Preference number: 4 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSLPLVR*HLPISS
Trigger: AGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAA...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCTGGATTACCAGGATGTaGATGGTAAACACCATGGAA +
Preference number: 4 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSWITRM*MVNTME
Trigger: TTCCATGGTGTTTACCATTCACATCCTGGTAATCCA...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGGAGTCCGGCTGCAATaGCAGCTATCTGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAGVRLQ*QLSAGV
Trigger: TACACCAGCAGATAGCTGTCATTGCAGCCGGACTCC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATGGAGTCCGGCTGCAATaGCAGCTATCTGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNGVRLQ*QLSAGV
Trigger: TACACCAGCAGATAGCTGTCATTGCAGCCGGACTCC...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp CCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTTCTACTAAAATGACATaGAGCATGGTGAGCGAAACT +
Preference number: 4 (lower is better)
Translates to: PWPTVDSAQEIQQNILFPSTKMT*SMVSET
Trigger: AGTTTCGCTCACCATGCTTCATGTCATTTTAGTAGA...AGGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTTCAGTTCCATTCCTCTaGTCGATATGTCTATCCATA +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEASVPFL*SICLSI
Trigger: TATGGATAGACATATCGATCAGAGGAATGGAACTGA...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGCCCAGCACCGTTTGTTaGAAAGACCACTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVPSTVC*KDHSFS
Trigger: AGAGAAGGAGTGGTCTTTTCAACAAACGGTGCTGGG...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTATCAAGTATTGGCTTTaGATTTGGGTGAGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAIKYWL*IWVSLY
Trigger: GTAAAGGCTCACCCAAATTCAAAGCCAATACTTGAT...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TATAGAGGCAATGCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTAAAAGGATGTCCAGTTaGCCGGCAACACAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: YRGNAWEDPLIPSSCQFLKRMSS*PATQFH
Trigger: GTGAAACTGTGTTGCCGGGCAACTGGACATCCTTTT...AAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGCATTGCCTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp CCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTACAGACATAAAAGCCTaGATCTTTTACATGCACTGC +
Preference number: 4 (lower is better)
Translates to: PWPTVDSAQEIQQNILFPTDIKA*IFYMHC
Trigger: GCAGTGCATGTAAAAGATGCAGGCTTTTATGTCTGT...AGGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp GAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCAATCCTGGATTTCAAAAGCTTCTaGTCCTTGACACGTGGCATA +
Preference number: 4 (lower is better)
Translates to: EVSQHSLPACPLQYLPILDFKSF*SLTRGI
Trigger: TATGCCACGTGTCAAGGAGCAGAAGCTTTTGAAATC...CAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp TTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTCCTTGACACGTTCAGTGCACTCCACTaGCTCATCTGTTCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: FHLPIQNAGFQKLLLLDTFSALH*LICSSY
Trigger: ATAGGAAGAACAGATGAGGCAGTGGAGTGCACTGAA...CGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGGGCAGAATTCAACAATaGAGCCATCTAGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVGRIQQ*SHLGLG
Trigger: TCCCAGGCCTAGATGGCTGCATTGTTGAATTCTGCC...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACCAAGACGTGCCACTaGACTACAGCCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATKTCH*TTAWET
Trigger: TGTCTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGATTTCTCCAAACATCTaGTTCGGCTACTCATTCCAT +
Preference number: 4 (lower is better)
Translates to: PAAMTAICWCNITWITRMISPNI*FGYSFH
Trigger: ATGGAATGAGTAGCCGAAGCAGATGTTTGGAGAAAT...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CCA 90 bp CTGTTTGCCTTTGGTAAGGTGACACTTACCCATATCTTCTGCAACTTCATCCAGAGTAATCTTTATTCCTaGGGGGCTGAGAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LFAFGKVTLTHIFCNFIQSNLYS*GAEKLK
Trigger: CTTCAGCTTCTCAGCCCCCCAGGAATAAAGATTACT...CTGGATGAAGTTGCAGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp GGTGGCTGCAGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTTGAAAGCATCCAGCTGTGACCACTaGCTGAATTCAAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: GGCRTLVRTIRHKTSLKASSCDH*LNSKVK
Trigger: TTTCACCTTTGAATTCAGCCAGTGGTCACAGCTGGA...TGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCTGCAGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTAACCAATGTGCTGCCTaGCATCAGCTTTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSNQCAA*HQLLGS
Trigger: ACTTCCCAAAAGCTGATGCCAGGCAGCACATTGGTT...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CCA 90 bp GGTGGCTGCAGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTTGAAAGCAAGACCTATATGGATTTaGAGCATCAACGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: GGCRTLVRTIRHKTSLKARPIWI*SINGDH
Trigger: ATGGTCCCCGTTGATGCTCCAAATCCATATAGGTCT...TGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCTGCAGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACTGCTCCTCCTGAGGTaGCTGCAGAACTCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQALLLLR*LQNSGK
Trigger: CTTACCAGAGTTCTGCAGCCACCTCAGGAGGAGCAG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGCTGCTCCTCCTGAGGTaGCTGCAGAACTCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLLLLLR*LQNSGK
Trigger: CTTACCAGAGTTCTGCAGCCACCTCAGGAGGAGCAG...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGCCGGGGCCAGCTGGATaGGGTTTGAATTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLPGPAG*GLNFSS
Trigger: AGAGCTGAAATTCAAACCCCATCCAGCTGGCCCCGG...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATGCAAACATCCAGCTGTaGCCACTGGCTGAATTCAAA +
Preference number: 4 (lower is better)
Translates to: QVAASFFRCAFICIFWINANIQL*PLAEFK
Trigger: TTTGAATTCAGCCAGTGGTCACAGCTGGATGTTTGC...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAGCAAACATCCAGCTGTaGCCACTGGCTGAATTCAAA +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVEANIQL*PLAEFK
Trigger: TTTGAATTCAGCCAGTGGTCACAGCTGGATGTTTGC...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTATGGTAATTCATTTTTaGACCACTGGTAGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: AWEDPLIPSSCQFLQVCLMVIHF*TTGSEE
Trigger: TTCCTCACTACCAGTGGTTCAAAAATGAATTACCAT...AAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR TCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCATTTTTGCAGTGAACTaGGTCTGGTATAGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSIFAVN*VWYRGN
Trigger: ATTGCCTCTATACCAGACTCAGTTCACTGCAAAAAT...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTTAGGTTATGCCTGGTaGTCGGCAAGGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVLGYAW*SARFFL
Trigger: CAGAAAGAACCTTGCCGATCACCAGGCATAACCTAA...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GCTTGTCCTCTACAGTATCTTCCAATCCTGAGTACTGATATGATAAACATACTGAAAACAGTTCCTGGGTaGCAGGTGAACCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ACPLQYLPILSTDMINILKTVPG*QVNQRL
Trigger: CAGCCTTTGGTTCACCTGTCACCCAGGAACTGTTTT...CAGTATGTTTATCATATCAGTACTCAGGATTGGAAGATACTGTAGAGGACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS-3UTR GCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGACCTTAAGAGAACACTaGTCCAGGTCTAGGCAACTG +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVTLREH*SRSRQL
Trigger: CAGTTGCCTAGACCTGGAGCAGTGTTCTCTTAAGGT...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTCCTTGACACGACTGTAAAACCAATGTaGTGCCTGGCATCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: FHLPIQNAGFQKLLLLDTTVKPM*CLASAF
Trigger: AAAAGCTGATGCCAGGCAGCACATTGGTTTTACAGT...CGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR GCA 90 bp CTGTTTGCCTTTGGTAAGGTGACACTTACCCATATCTTCTGCAACTTCATCCAGCCAACATTCACTTCCTaGTTGTCCTCTACAGTATCT +
Preference number: 4 (lower is better)
Translates to: LFAFGKVTLTHIFCNFIQPTFTS*LSSTVS
Trigger: AGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGG...CTGGATGAAGTTGCAGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCCTTCCCAAACCTCGATaGATGTCTAATTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSLPKPR*MSNLAM
Trigger: CATTGCTAAATTAGACATGCATCGAGGTTTGGGAAG...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACATCTGGAGTCCGGCTaGAATGACAGCTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAHLESG*NDSYLL
Trigger: CAGCAGATAGCTGTCATTGCAGCCGGACTCCAGATG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAACATCTGGAGTCCGGCTaGAATGACAGCTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNEHLESG*NDSYLL
Trigger: CAGCAGATAGCTGTCATTGCAGCCGGACTCCAGATG...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAAAGCCTCCACGGATGCTaGAGTGAGCTGAGACTATGT +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNESLHGC*SELRLC
Trigger: ACATAGTCTCAGCTCACTGCAGCATCCGTGGAGGCT...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTTTTGAGACAGCGTCTTaGCCTGTCGTCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVFETAS*PVVQAG
Trigger: TCCAGCCTGGACGACAGGGCAAGACGCTGTCTCAAA...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCATTTTCAGACCTATATaGATTTGGAGCATCAACGGG +
Preference number: 4 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSIFRPI*IWSING
Trigger: CCCGTTGATGCTCCAAATCCATATAGGTCTGAAAAT...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp AAGTCCAGCTGTCTCAGTAAGTTAGTCAATTCGTACACATCCACCAAAGGAGCTCTGCTCCTTGACACGTaGCATATCCAAACACAATAT +
Preference number: 4 (lower is better)
Translates to: KSSCLSKLVNSYTSTKGALLLDT*HIQTQY
Trigger: ATATTGTGTTTGGATATGCCACGTGTCAAGGAGCAG...AGCTCCTTTGGTGGATGTGTACGAATTGACTAACTTACTGAGACAGCTGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
3UTR CAA 72 bp CAGTCATTTGTGGATATGTGTAAATGGGTGAAAAATTaGAGTCACCCAGTACACATGTTCCCAGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QSFVDMCKWVKN*SHPVHMFPAEA
Trigger: AGCCTCAGCTGGGAACATGTGTACTGGGTGACTCAAATTTTTCACCCATTTACACATATCCACAAATGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR CAA 72 bp AATATCCCCTCTCAGCATCAAGTATTGGCTTTGAATTaGGGTGAGCCTTTACTTGCTCAAACCTCCACTATC +
Preference number: 4 (lower is better)
Translates to: NIPSQHQVLALN*GEPLLAQTSTI
Trigger: GATAGTGGAGGTTTGAGCAAGTAAAGGCTCACCCAAATTCAAAGCCAATACTTGATGCTGAGAGGGGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAACAGTGAAACCACTTTaGAGTCCAGCTGTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVETVKPL*SPAVSV
Trigger: TACTGAGACAGCTGGACTTCAAAGTGGTTTCACTGT...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGAATGGGTCTTGCAATaGGTGATAATGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAEWVLQ*VIMPCS
Trigger: GGAGCAGGGCATTATCACTCATTGCAAGACCCATTC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTCATAAAGATTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTGAATGGGTCTTGCAATaGGTGATAATGCCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FIKIPFANPECWISKASAEWVLQ*VIMPCS
Trigger: GGAGCAGGGCATTATCACTCATTGCAAGACCCATTC...AGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAATCTTTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATTGGATTACCAGGATGTaGATGGTAAACACCATGGAA +
Preference number: 4 (lower is better)
Translates to: DPLIPSSCQFLQVCLYLHWITRM*MVNTME
Trigger: TTCCATGGTGTTTACCATTCACATCCTGGTAATCCA...ATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp GGTGGCTGCAGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTTGAAAGCATCTACTAAAATGACATaGAGCATGGTGAGCGAAACT +
Preference number: 4 (lower is better)
Translates to: GGCRTLVRTIRHKTSLKASTKMT*SMVSET
Trigger: AGTTTCGCTCACCATGCTTCATGTCATTTTAGTAGA...TGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCTGCAGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAGGCTTTGAATTTGGGTaGGCCTTTACTTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVEGFEFG*AFTCSN
Trigger: GTTTGAGCAAGTAAAGGCTCACCCAAATTCAAAGCC...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp GGTGGCTGCAGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTTGAAAGCAACAGACATAAAAGCCTaGATCTTTTACATGCACTGC +
Preference number: 4 (lower is better)
Translates to: GGCRTLVRTIRHKTSLKATDIKA*IFYMHC
Trigger: GCAGTGCATGTAAAAGATGCAGGCTTTTATGTCTGT...TGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCTGCAGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTAGGTGTGCCTTTATTTaGATCTTTTGGATCAATATC +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEARCAFI*IFWINI
Trigger: GATATTGATCCAAAAGATGCAAATAAAGGCACACCT...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATTTGATACCAAGTAGCTaGCAGTTTCTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: QVAASFFRCAFICIFWINLIPSS*QFLQVC
Trigger: GCACACCTGAAGAAACTGGCAGCTACTTGGTATCAA...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTTGATACCAAGTAGCTaGCAGTTTCTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVLIPSS*QFLQVC
Trigger: GCACACCTGAAGAAACTGGCAGCTACTTGGTATCAA...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAAACAAGATGATGCTCTaGCTTCCTGCTTCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVENKMML*LPASVS
Trigger: TGAGACTGAAGCAGGAAGGCAGAGCATCATCTTGTT...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAACTATCACACTGGGAGTaGGGATACCAAGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNELSHWE*GYQASH
Trigger: ATGGGATGCTTGGTATCCGCACTCCCAGTGTGATAG...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAATCCAGCTGTGACCACTaGCTGAATTCAAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVESSCDH*LNSKVK
Trigger: TTTCACCTTTGAATTCAGCCAGTGGTCACAGCTGGA...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATCTCTGGAAGCTCTCTaGGATGTCGCAAACATCCAG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQASLEAL*DVANIQ
Trigger: CTGGATGTTTGCGACATCCCAGAGAGCTTCCAGAGA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACCATCAACACTTCTCTaGAAGCTCTCTGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAPSTLL*KLSGMS
Trigger: CGACATCCCAGAGAGCTTCCAGAGAAGTGTTGATGG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TATAGAGGCAATGCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCACAGATTTGCAACTTaGATTCAGAGACGCCATCAA +
Preference number: 4 (lower is better)
Translates to: YRGNAWEDPLIPSSCQFLHRFAT*IQRRHQ
Trigger: TTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTG...AAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGCATTGCCTCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CCA 90 bp GCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCCATCCAAGATTGGAATaGTATCATCGTAGTCATTTC +
Preference number: 4 (lower is better)
Translates to: AMRGFPTFTSCLSSTVSSHPRLE*YHRSHF
Trigger: GAAATGACTACGATGATACCATTCCAATCTTGGATG...GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTCTCATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp CCTCGATGCATGTCTAATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTGCTTCTGTTCCCTGTATTaGATCAGTAAGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PRCMSNLAMRGFPTFTSCFCSLY*ISKCSL
Trigger: AAGAGAGCACTTACTGATCCAATACAGGGAACAGAA...GCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATTAGACATGCATCGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGAAGTTCATGAGCCTTaGCCCACTGTAGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAEVHEP*PTVDSA
Trigger: TGCGGAATCTACAGTGGGCCAAGGCTCATGAACTTC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TATAGAGGCAATGCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTAAGACACATACTTTCTaGAAGTTCATGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: YRGNAWEDPLIPSSCQFLKTHTF*KFMSLG
Trigger: GCCAAGGCTCATGAACTTCCAGAAAGTATGTGTCTT...AAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGCATTGCCTCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAACTGGAATAGATTTCTaGAGGTCTCAGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVETGIDF*RSQFWC
Trigger: GCACCAGAACTGAGACCTCCAGAAATCTATTCCAGT...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATACTGGAGGGTGGAAATaGCAGGGGCAATTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNTGGWK*QGQFCV
Trigger: TACACAGAATTGCCCCTGCCATTTCCACCCTCCAGT...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAAGAAATGACTGGAGGGTaGAAATGGCAGGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNEEMTGG*KWQGQF
Trigger: GAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTGTGGATATGTGTAAATaGGTGAAAAATTTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAVDMCK*VKNLSH
Trigger: GTGACTCAAATTTTTCACCCATTTACACATATCCAC...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR CAA 72 bp AGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTaGAAAGCAAGTCTTCCTTCCCAAACCTCGATGCAT +
Preference number: 4 (lower is better)
Translates to: RTLVRTIRHKTS*KASLPSQTSMH
Trigger: ATGCATCGAGGTTTGGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR CAA 72 bp TACCTTCCAGAAAATATCCCCTCTCAGCATCAAGTATaGGCTTTGAATTTGGGTGAGCCTTTACTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: YLPENIPSQHQV*ALNLGEPLLAQ
Trigger: TTGAGCAAGTAAAGGCTCACCCAAATTCAAAGCCAATACTTGATGCTGAGAGGGGATATTTTCTGGAAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGCAAACATCCAGCTGTaGCCACTGGCTGAATTCAAA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAANIQL*PLAEFK
Trigger: TTTGAATTCAGCCAGTGGTCACAGCTGGATGTTTGC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GGTGGCTGCAGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTTGAAAGCAACCTTCTTGCTATCTTaGCTGTCTCGATCATTATAT +
Preference number: 4 (lower is better)
Translates to: GGCRTLVRTIRHKTSLKATFLLS*LSRSLY
Trigger: ATATAATGATCGAGACAGTCAAGATAGCAAGAAGGT...TGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCTGCAGCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGAGTAAGATCCAACAGTaGAACCACTTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVSKIQQ*NHFEVQ
Trigger: CTGGACTTCAAAGTGGTTTCACTGTTGGATCTTACT...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAAAAGCTTCTGCTCCTTaGCACGTGGCATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAKASAP*HVAYPN
Trigger: GTTTGGATATGCCACGTGTCAAGGAGCAGAAGCTTT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGAAAGCTTCTGCTCCTTaGCACGTGGCATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLKASAP*HVAYPN
Trigger: GTTTGGATATGCCACGTGTCAAGGAGCAGAAGCTTT...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAGACATAAGACAAGTTTaGAAGCAAGTCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVEDIRQV*KQVFLP
Trigger: GGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTC...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATGACATAAGACAAGTTTaGAAGCAAGTCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QVAASFFRCAFICIFWINDIRQV*KQVFLP
Trigger: GGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTC...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAATTGAAGACAGGTGTTTaGGACCAGCATGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNELKTGV*DQHGQQ
Trigger: TTGTTGCCCATGCTGGTCTCAAACACCTGTCTTCAA...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGCTATTAGTAAGGGCTaGAACCTGAGGTGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAAISKG*NLRCLR
Trigger: TCTGAGACACCTCAGGTTTCAGCCCTTACTAATAGC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACCTTAAGAGAACACTaGTCCAGGTCTAGGCAACTG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATLREH*SRSRQL
Trigger: CAGTTGCCTAGACCTGGAGCAGTGTTCTCTTAAGGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAAAAAGGATGTCCAGTTaGCCGGCAACACAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAKRMSS*PATQFH
Trigger: GTGAAACTGTGTTGCCGGGCAACTGGACATCCTTTT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGTAAAACCAATGTGCTaGCTGGCATCAGCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAVKPMC*LASAFG
Trigger: CCCAAAAGCTGATGCCAGGCAGCACATTGGTTTTAC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGGATTTCAAAAGCTTCTaGTCCTTGACACGTGGCATA +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVDFKSF*SLTRGI
Trigger: TATGCCACGTGTCAAGGAGCAGAAGCTTTTGAAATC...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp GAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCAATCCTGTGTTCCTTTAATTTTTaGAGTGAACTGAGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: EVSQHSLPACPLQYLPILCSFNF*SELSLV
Trigger: TACCAGACTCAGTTCACTGCAAAAATTAAAGGAACA...CAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATCCAACATTCACTTCCTaGTTGTCCTCTACAGTATCT +
Preference number: 4 (lower is better)
Translates to: QVAASFFRCAFICIFWINPTFTS*LSSTVS
Trigger: AGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGG...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAAACCAATGTGCTGCCTaGCATCAGCTTTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQANQCAA*HQLLGS
Trigger: ACTTCCCAAAAGCTGATGCCAGGCAGCACATTGGTT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATAACCAATGTGCTGCCTaGCATCAGCTTTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNNQCAA*HQLLGS
Trigger: ACTTCCCAAAAGCTGATGCCAGGCAGCACATTGGTT...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp AAGTCCAGCTGTCTCAGTAAGTTAGTCAATTCGTACACATCCACCAAAGGAGCTCATCCAAGATTGGAATaGTATCATCGTAGTCATTTC +
Preference number: 4 (lower is better)
Translates to: KSSCLSKLVNSYTSTKGAHPRLE*YHRSHF
Trigger: GAAATGACTACGATGATACCATTCCAATCTTGGATG...AGCTCCTTTGGTGGATGTGTACGAATTGACTAACTTACTGAGACAGCTGGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS-3UTR CCA 90 bp TTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTCCTTGACACGATGACAGCTATCTGCTaGTGTAACATTACTTGGATT +
Preference number: 4 (lower is better)
Translates to: FHLPIQNAGFQKLLLLDTMTAIC*CNITWI
Trigger: AATCCAAGTAATGTTACACCAGCAGATAGCTGTCAT...CGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTGAGATCCCAACTCCATaGGTGTTGGTTTTGTTAATT +
Preference number: 4 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSEIPTP*VLVLLI
Trigger: AATTAACAAAACCAACACCCATGGAGTTGGGATCTC...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CCA 90 bp GCTTGTCCTCTACAGTATCTTCCAATCCTGAGTACTGATATGATAAACATACTGACTGGAATAGATTTCTaGAGGTCTCAGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ACPLQYLPILSTDMINILTGIDF*RSQFWC
Trigger: GCACCAGAACTGAGACCTCCAGAAATCTATTCCAGT...CAGTATGTTTATCATATCAGTACTCAGGATTGGAAGATACTGTAGAGGACAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGTCTGCCCTTACTAGCTaGGTTATCCTGGAGGGTATA +
Preference number: 4 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLSALTS*VILEGI
Trigger: TATACCCTCCAGGATAACCCAGCTAGTAAGGGCAGA...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACAGTGAAACCACTTTaGAGTCCAGCTGTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATVKPL*SPAVSV
Trigger: TACTGAGACAGCTGGACTTCAAAGTGGTTTCACTGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACATCAACGGGGACCATaGAGCTGTTCCCAAAATTTT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAHQRGP*SCSQNF
Trigger: AAAATTTTGGGAACAGCTTCATGGTCCCCGTTGATG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGCATCAACGGGGACCATaGAGCTGTTCCCAAAATTTT +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLHQRGP*SCSQNF
Trigger: AAAATTTTGGGAACAGCTTCATGGTCCCCGTTGATG...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAATTTTTGCAGTGAACTaGGTCTGGTATAGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVEIFAVN*VWYRGN
Trigger: ATTGCCTCTATACCAGACTCAGTTCACTGCAAAAAT...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTTTAGGTTATGCCTGGTaGTCGGCAAGGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVLGYAW*SARFFL
Trigger: CAGAAAGAACCTTGCCGATCACCAGGCATAACCTAA...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGCTTGGTAGCACTTTTTaGAATTGGTACGTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVLGSTF*NWYVFQ
Trigger: TTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAG...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTAAAAGGATGTCCAGTTaGCCGGCAACACAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLKRMSS*PATQFH
Trigger: GTGAAACTGTGTTGCCGGGCAACTGGACATCCTTTT...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp CTGTTTGCCTTTGGTAAGGTGACACTTACCCATATCTTCTGCAACTTCATCCAGCCTGCATCTTTTACATaGACTGCATTAAAAATAAGC +
Preference number: 4 (lower is better)
Translates to: LFAFGKVTLTHIFCNFIQPASFT*TALKIS
Trigger: GCTTATTTTTAATGCAGTGCATGTAAAAGATGCAGG...CTGGATGAAGTTGCAGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAACAGACATAAAAGCCTaGATCTTTTACATGCACTGC +
Preference number: 4 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVETDIKA*IFYMHC
Trigger: GCAGTGCATGTAAAAGATGCAGGCTTTTATGTCTGT...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTGTAAAACCAATGTGCTaGCTGGCATCAGCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVVKPMC*LASAFG
Trigger: CCCAAAAGCTGATGCCAGGCAGCACATTGGTTTTAC...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp CTGTTTGCCTTTGGTAAGGTGACACTTACCCATATCTTCTGCAACTTCATCCAGAGGTGTGCCTTTATTTaGATCTTTTGGATCAATATC +
Preference number: 4 (lower is better)
Translates to: LFAFGKVTLTHIFCNFIQRCAFI*IFWINI
Trigger: GATATTGATCCAAAAGATGCAAATAAAGGCACACCT...CTGGATGAAGTTGCAGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp CCTCGATGCATGTCTAATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTGCAGGTGTGCCTTTATTTaGATCTTTTGGATCAATATC +
Preference number: 4 (lower is better)
Translates to: PRCMSNLAMRGFPTFTSCRCAFI*IFWINI
Trigger: GATATTGATCCAAAAGATGCAAATAAAGGCACACCT...GCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATTAGACATGCATCGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATTGATACCAAGTAGCTaGCAGTTTCTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQALIPSS*QFLQVC
Trigger: GCACACCTGAAGAAACTGGCAGCTACTTGGTATCAA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATCTTCCCAAACCTCGATaGATGTCTAATTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: QVAASFFRCAFICIFWINLPKPR*MSNLAM
Trigger: CATTGCTAAATTAGACATGCATCGAGGTTTGGGAAG...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp GCTTGTCCTCTACAGTATCTTCCAATCCTGAGTACTGATATGATAAACATACTGGCAATGACAGCTATCTaGTGGTGTAACATTACTTGG +
Preference number: 4 (lower is better)
Translates to: ACPLQYLPILSTDMINILAMTAI*WCNITW
Trigger: CCAAGTAATGTTACACCAGCAGATAGCTGTCATTGC...CAGTATGTTTATCATATCAGTACTCAGGATTGGAAGATACTGTAGAGGACAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATTTCAGTGCACTCCACTaGCTCATCTGTTCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNFSALH*LICSSY
Trigger: ATAGGAAGAACAGATGAGGCAGTGGAGTGCACTGAA...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGGATAAAATTAGGTTATaGCTGGTGATCGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVDKIRL*LVIGKV
Trigger: AACCTTGCCGATCACCAGGCATAACCTAATTTTATC...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGGATGCTCTGCCTTCCTaGTTCAGTCTCATAGAGAAA +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLDALPS*FSLIEK
Trigger: TTTCTCTATGAGACTGAAGCAGGAAGGCAGAGCATC...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGCTATTCTGGGTCCCCTaGGTTTCCCTACCAATTTTA +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLLFWVP*VSLPIL
Trigger: TAAAATTGGTAGGGAAACGCAGGGGACCCAGAATAG...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAAAAAAATTGCGACTGCTaGACAGGACACCTCACTGTT +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNEKNCDC*TGHLTV
Trigger: AACAGTGAGGTGTCCTGTGCAGCAGTCGCAATTTTT...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAAGTAATCTTTATTCCTaGGGGGCTGAGAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQASNLYS*GAEKLK
Trigger: CTTCAGCTTCTCAGCCCCCCAGGAATAAAGATTACT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATCCAGCTGTGACCACTaGCTGAATTCAAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQASSCDH*LNSKVK
Trigger: TTTCACCTTTGAATTCAGCCAGTGGTCACAGCTGGA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATCCTTCGCCAAAGGCTaGTCAGTTGTTTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQASFAKG*SVVCSL
Trigger: TAAAGAGCAAACAACTGACCAGCCTTTGGCGAAGGA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAAGACCTATATGGATTTaGAGCATCAACGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQARPIWI*SINGDH
Trigger: ATGGTCCCCGTTGATGCTCCAAATCCATATAGGTCT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGAGACCTATATGGATTTaGAGCATCAACGGGGACCAT +
Preference number: 4 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLRPIWI*SINGDH
Trigger: ATGGTCCCCGTTGATGCTCCAAATCCATATAGGTCT...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATATGACAGCTATCTGCTaGTGTAACATTACTTGGATT +
Preference number: 4 (lower is better)
Translates to: DPLIPSSCQFLQVCLYLHMTAIC*CNITWI
Trigger: AATCCAAGTAATGTTACACCAGCAGATAGCTGTCAT...ATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp GGTGGCTGCAGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTTGAAAGCAATCAGTTGTCTCTACTaGCACATTACTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: GGCRTLVRTIRHKTSLKAISCLY*HITSTK
Trigger: TTTAGTAGAAGTAATGTGCCAGTAGAGACAACTGAT...TGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCTGCAGCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
3UTR CAA 72 bp CCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTaGCATCTTTTGGATCAATATCTAGATCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PSSCQFLQVCLY*HLLDQYLDQVE
Trigger: TTCCACTTGATCTAGATATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGATGGTAATTCATTTTTaGACCACTGGTAGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: TLSTNITLISEPVRKAVVMVIHF*TTGSEE
Trigger: TTCCTCACTACCAGTGGTTCAAAAATGAATTACCAT...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAAGTAAGATCCAACAGTaGAACCACTTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQASKIQQ*NHFEVQ
Trigger: CTGGACTTCAAAGTGGTTTCACTGTTGGATCTTACT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTCATAAAGATTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTAGTAAGATCCAACAGTaGAACCACTTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FIKIPFANPECWISKASASKIQQ*NHFEVQ
Trigger: CTGGACTTCAAAGTGGTTTCACTGTTGGATCTTACT...AGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAATCTTTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATQYWR*LLVHPR
Trigger: TCTTGGATGCACTAAAAGTCACCGCCAATATTGTGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATTGCCTTTGGTAAGGTaGCACTTACCCATATCTTCT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQALPLVR*HLPISS
Trigger: AGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGACATAAGACAAGTTTaGAAGCAAGTCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQADIRQV*KQVFLP
Trigger: GGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATGGATTACCAGGATGTaGATGGTAAACACCATGGAA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAWITRM*MVNTME
Trigger: TTCCATGGTGTTTACCATTCACATCCTGGTAATCCA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGTGTGTTCCATAGCCTaGAGGAAATCACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAVCSIA*RKSLNS
Trigger: AGAATTGAGTGATTTCCTGCAGGCTATGGAACACAC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTCATAAAGATTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTGTGTGTTCCATAGCCTaGAGGAAATCACTCAATTCT +
Preference number: 4 (lower is better)
Translates to: FIKIPFANPECWISKASAVCSIA*RKSLNS
Trigger: AGAATTGAGTGATTTCCTGCAGGCTATGGAACACAC...AGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAATCTTTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGGTTCAACACAGATTTaGAACTTGGATTCAGAGACG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAGSTQI*NLDSET
Trigger: CGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATGGTTCAACACAGATTTaGAACTTGGATTCAGAGACG +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNGSTQI*NLDSET
Trigger: CGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACC...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTCATAAAGATTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTGGTTCAACACAGATTTaGAACTTGGATTCAGAGACG +
Preference number: 4 (lower is better)
Translates to: FIKIPFANPECWISKASAGSTQI*NLDSET
Trigger: CGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACC...AGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAATCTTTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACTGTAAAACCAATGTaGTGCCTGGCATCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATVKPM*CLASAF
Trigger: AAAAGCTGATGCCAGGCAGCACATTGGTTTTACAGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGATTTCAAAAGCTTCTaGTCCTTGACACGTGGCATA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQADFKSF*SLTRGI
Trigger: TATGCCACGTGTCAAGGAGCAGAAGCTTTTGAAATC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACCAACATTCACTTCCTaGTTGTCCTCTACAGTATCT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAPTFTS*LSSTVS
Trigger: AGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGCAATGACAGCTATCTaGTGGTGTAACATTACTTGG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAAMTAI*WCNITW
Trigger: CCAAGTAATGTTACACCAGCAGATAGCTGTCATTGC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATTTAATTCATCTTCAGTaGACTCCACTGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNLIHLQ*TPLPHL
Trigger: CAGATGAGGCAGTGGAGTGCACTGAAGATGAATTAA...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACACAGATTTGCAACTTaGATTCAGAGACGCCATCAA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAHRFAT*IQRRHQ
Trigger: TTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGCACAGATTTGCAACTTaGATTCAGAGACGCCATCAA +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLHRFAT*IQRRHQ
Trigger: TTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTG...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTTCCTTCGCCAAAGGCTaGTCAGTTGTTTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVSFAKG*SVVCSL
Trigger: TAAAGAGCAAACAACTGACCAGCCTTTGGCGAAGGA...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACTGCTCCTTGACACGTaGCATATCCAAACACAATAT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQALLLDT*HIQTQY
Trigger: ATATTGTGTTTGGATATGCCACGTGTCAAGGAGCAG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTCATAAAGATTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTCTGCTCCTTGACACGTaGCATATCCAAACACAATAT +
Preference number: 4 (lower is better)
Translates to: FIKIPFANPECWISKASALLLDT*HIQTQY
Trigger: ATATTGTGTTTGGATATGCCACGTGTCAAGGAGCAG...AGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAATCTTTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp ATTAGACATAAGACAAGTTTGAAAGCAAGTCTTCCTTCCCAAACCTCGATGCATTTCTGTTCCCTGTATTaGATCAGTAAGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: IRHKTSLKASLPSQTSMHFCSLY*ISKCSL
Trigger: AAGAGAGCACTTACTGATCCAATACAGGGAACAGAA...ATGCATCGAGGTTTGGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAAAGACACATACTTTCTaGAAGTTCATGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAKTHTF*KFMSLG
Trigger: GCCAAGGCTCATGAACTTCCAGAAAGTATGTGTCTT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGCCAACCTTGAATTCCTaGGATAAATTCCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLPTLNS*DKFHLV
Trigger: GACCAAGTGGAATTTATCCCAGGAATTCAAGGTTGG...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR CAA 72 bp ATCTCATATTCAGTAAGATCCAACAGTGAAACCACTTaGAAGTCCAGCTGTCTCAGTAAGTTAGTCAATTCG +
Preference number: 4 (lower is better)
Translates to: ISYSVRSNSETT*KSSCLSKLVNS
Trigger: CGAATTGACTAACTTACTGAGACAGCTGGACTTCAAAGTGGTTTCACTGTTGGATCTTACTGAATATGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS-3UTR TCA 90 bp CATATACTCCCTTGTCTAAAAGGAGTAAAAACTCATCCACAGCATTACGCATCTACCTTCTTGCTATCTTaGCTGTCTCGATCATTATAT +
Preference number: 4 (lower is better)
Translates to: HILPCLKGVKTHPQHYASTFLLS*LSRSLY
Trigger: ATATAATGATCGAGACAGTCAAGATAGCAAGAAGGT...AGATGCGTAATGCTGTGGATGAGTTTTTACTCCTTTTAGACAAGGGAGTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS-3UTR TCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLTQYWR*LLVHPR
Trigger: TCTTGGATGCACTAAAAGTCACCGCCAATATTGTGT...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAATTTTTGCAGTGAACTaGGTCTGGTATAGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAIFAVN*VWYRGN
Trigger: ATTGCCTCTATACCAGACTCAGTTCACTGCAAAAAT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTTGGATTACCAGGATGTaGATGGTAAACACCATGGAA +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLWITRM*MVNTME
Trigger: TTCCATGGTGTTTACCATTCACATCCTGGTAATCCA...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATCTACTAAAATGACATaGAGCATGGTGAGCGAAACT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQASTKMT*SMVSET
Trigger: AGTTTCGCTCACCATGCTTCATGTCATTTTAGTAGA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTCTTCAAGTACAATGCTaGATAGAAGTAGTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLLQVQC*IEVVPS
Trigger: ACTCGGCACTACTTCTATTCAGCATTGTACTTGAAG...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAATGCAAGTCAGAGATTTaGAAAGAGGCATTAGAGATG +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNECKSEI*KEALEM
Trigger: CATCTCTAATGCCTCTTTTCAAATCTCTGACTTGCA...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTCAGTATACATGTCAGTaGTCTAAGCTCTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLQYTCQ*SKLWLH
Trigger: ATGTAGCCAGAGCTTAGATCACTGACATGTATACTG...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACAGACATAAAAGCCTaGATCTTTTACATGCACTGC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATDIKA*IFYMHC
Trigger: GCAGTGCATGTAAAAGATGCAGGCTTTTATGTCTGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACTTCCCAAACCTCGATaGATGTCTAATTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQALPKPR*MSNLAM
Trigger: CATTGCTAAATTAGACATGCATCGAGGTTTGGGAAG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTGCAATGACAGCTATCTaGTGGTGTAACATTACTTGG +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLAMTAI*WCNITW
Trigger: CCAAGTAATGTTACACCAGCAGATAGCTGTCATTGC...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATCAAAGTCCTGAAGTTTaGTATGAAACAGTTACTACT +
Preference number: 4 (lower is better)
Translates to: QVAASFFRCAFICIFWINQSPEV*YETVTT
Trigger: AGTAGTAACTGTTTCATAGCAAACTTCAGGACTTTG...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGATAAAATTAGGTTATaGCTGGTGATCGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQADKIRL*LVIGKV
Trigger: AACCTTGCCGATCACCAGGCATAACCTAATTTTATC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAATTTTCAGACCTATATaGATTTGGAGCATCAACGGG +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAIFRPI*IWSING
Trigger: CCCGTTGATGCTCCAAATCCATATAGGTCTGAAAAT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATATTTTCAGACCTATATaGATTTGGAGCATCAACGGG +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNIFRPI*IWSING
Trigger: CCCGTTGATGCTCCAAATCCATATAGGTCTGAAAAT...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATTCTGTTCCCTGTATTaGATCAGTAAGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAFCSLY*ISKCSL
Trigger: AAGAGAGCACTTACTGATCCAATACAGGGAACAGAA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGGCACTTTAGAGGAATaGTCTTATTTAGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAGTLEE*SYLVLP
Trigger: TGGCAGTACTAAATAAGACCATTCCTCTAAAGTGCC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGTTCTATCTGCTACCCTaGTGCCTAATTAGCAACTTA +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLFYLLP*CLISNL
Trigger: TAAGTTGCTAATTAGGCACCAGGGTAGCAGATAGAA...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAATGGTAATTCATTTTTaGACCACTGGTAGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAMVIHF*TTGSEE
Trigger: TTCCTCACTACCAGTGGTTCAAAAATGAATTACCAT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACCTTCTTGCTATCTTaGCTGTCTCGATCATTATAT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATFLLS*LSRSLY
Trigger: ATATAATGATCGAGACAGTCAAGATAGCAAGAAGGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATACCTTCTTGCTATCTTaGCTGTCTCGATCATTATAT +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNTFLLS*LSRSLY
Trigger: ATATAATGATCGAGACAGTCAAGATAGCAAGAAGGT...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR TCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTTCTACTAAAATGACATaGAGCATGGTGAGCGAAACT +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLSTKMT*SMVSET
Trigger: AGTTTCGCTCACCATGCTTCATGTCATTTTAGTAGA...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAATATTGGCATCCTTGTTaGAAACAAGTTGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNEYWHPC*KQVDQK
Trigger: TTTCTGGTCAACTTGTTTTCAACAAGGATGCCAATA...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGATTTTTCTCCCATTCTaGGGGTTAACTTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLIFLPF*GLTSLS
Trigger: AGAAAGTGAAGTTAACCCTCAGAATGGGAGAAAAAT...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR TCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGCTAATATTTTATTTTTaGGACAGCGTCTTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLLIFYF*DSVLPC
Trigger: ACAGGGCAAGACGCTGTCTCAAAAATAAAATATTAG...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp ATTAGACATAAGACAAGTTTGAAAGCAAGTCTTCCTTCCCAAACCTCGATGCATCCTGCATCTTTTACATaGACTGCATTAAAAATAAGC +
Preference number: 4 (lower is better)
Translates to: IRHKTSLKASLPSQTSMHPASFT*TALKIS
Trigger: GCTTATTTTTAATGCAGTGCATGTAAAAGATGCAGG...ATGCATCGAGGTTTGGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR GCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTCTTCCCAAACCTCGATaGATGTCTAATTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLLPKPR*MSNLAM
Trigger: CATTGCTAAATTAGACATGCATCGAGGTTTGGGAAG...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGAATGGACCTTTTCTGTaGCAGGATTCTTCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLNGPFL*QDSSLK
Trigger: CTTTAAAGAAGAATCCTGGCACAGAAAAGGTCCATT...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACATCCAAGATTGGAATaGTATCATCGTAGTCATTTC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAHPRLE*YHRSHF
Trigger: GAAATGACTACGATGATACCATTCCAATCTTGGATG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTTTCTGTTCCCTGTATTaGATCAGTAAGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLFCSLY*ISKCSL
Trigger: AAGAGAGCACTTACTGATCCAATACAGGGAACAGAA...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAATGACAGCTATCTGCTaGTGTAACATTACTTGGATT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAMTAIC*CNITWI
Trigger: AATCCAAGTAATGTTACACCAGCAGATAGCTGTCAT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAAGTATGGGTTTATTTCTaGATGTTCAGTTCCATTCCT +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNEVWVYF*MFSSIP
Trigger: AGGAATGGAACTGAACATCCAGAAATAAACCCATAC...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACCTGCATCTTTTACATaGACTGCATTAAAAATAAGC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAPASFT*TALKIS
Trigger: GCTTATTTTTAATGCAGTGCATGTAAAAGATGCAGG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAAGGTGTGCCTTTATTTaGATCTTTTGGATCAATATC +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQARCAFI*IFWINI
Trigger: GATATTGATCCAAAAGATGCAAATAAAGGCACACCT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATGTTCCTTTAATTTTTaGAGTGAACTGAGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQACSFNF*SELSLV
Trigger: TACCAGACTCAGTTCACTGCAAAAATTAAAGGAACA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAATGTTCCTTTAATTTTTaGAGTGAACTGAGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNECSFNF*SELSLV
Trigger: TACCAGACTCAGTTCACTGCAAAAATTAAAGGAACA...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACAAAGTCCTGAAGTTTaGTATGAAACAGTTACTACT +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAQSPEV*YETVTT
Trigger: AGTAGTAACTGTTTCATAGCAAACTTCAGGACTTTG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR GCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTACTGATCTTGTATCCTaGAACCTGTTGAACTCATTT +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVTDLVS*NLLNSF
Trigger: AAATGAGTTCAACAGGTTGCAGGATACAAGATCAGT...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTTATCTGCTACCCTGGTaGCTAATTAGCAACTTATTA +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVYLLPW*LISNLL
Trigger: TAATAAGTTGCTAATTAGGCACCAGGGTAGCAGATA...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAATCAGTTGTCTCTACTaGCACATTACTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAISCLY*HITSTK
Trigger: TTTAGTAGAAGTAATGTGCCAGTAGAGACAACTGAT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CCA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATATCAGTTGTCTCTACTaGCACATTACTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNISCLY*HITSTK
Trigger: TTTAGTAGAAGTAATGTGCCAGTAGAGACAACTGAT...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
3UTR CAA 72 bp TCTATTGATGGTATTGGCATCCTTGTTGAAAACAAGTaGACCAGAAATGTATGGGTTTATTTCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: SIDGIGILVENK*TRNVWVYFWMF
Trigger: GAACATCCAGAAATAAACCCATACATTTCTGGTCAACTTGTTTTCAACAAGGATGCCAATACCATCAATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR CAA 72 bp AAATTTATAACCCTCAAATTGATATCCGTGGCACTTTaGCAGTCATTTGTGGATATGTGTAAATGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KFITLKLISVAL*QSFVDMCKWVK
Trigger: TTTCACCCATTTACACATATCCACAAATGACTGCAAAAGTGCCACGGATATCAATTTGAGGGTTATAAATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR CAA 72 bp GAATTTACCAACTTGCTAAAATTTATAACCCTCAAATaGATATCCGTGGCACTTTTGCAGTCATTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: EFTNLLKFITLK*ISVALLQSFVD
Trigger: ATCCACAAATGACTGCAAAAGTGCCACGGATATCAATTTGAGGGTTATAAATTTTAGCAAGTTGGTAAATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
3UTR CAA 72 bp TTCTTAATGGTGTCCTTTAAGGCGCTAAAGTTAATTTaGATGAAGTCCCATTTATCTACTGTTTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: FLMVSFKALKLI*MKSHLSTVCLC
Trigger: ACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCCTTAAAGGACACCATTAAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTCCTGCATCTTTTACATaGACTGCATTAAAAATAAGC +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVPASFT*TALKIS
Trigger: GCTTATTTTTAATGCAGTGCATGTAAAAGATGCAGG...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTTGTTCCTTTAATTTTTaGAGTGAACTGAGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVCSFNF*SELSLV
Trigger: TACCAGACTCAGTTCACTGCAAAAATTAAAGGAACA...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR GCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTCAAAGTCCTGAAGTTTaGTATGAAACAGTTACTACT +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVQSPEV*YETVTT
Trigger: AGTAGTAACTGTTTCATAGCAAACTTCAGGACTTTG...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CCA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTTCAGGTCAAATCCTTTaGAAATGTTTTCAATGTGAC +
Preference number: 4 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVSGQIL*KCFQCD
Trigger: GTCACATTGAAAACATTTCCAAAGGATTTGACCTGA...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS CCA 90 bp TCCGCTCGCCTCCGAGCCGCGGAGGCAGGGGCGGAAGAACAAATCTaGCAGCGCGGCACGGCCCTCAGAGGAGGAAGCTCCGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: SARLRAAEAGAEEQI*QRGTALRGGSSAPR
Trigger: GCGGGGAGCGGAGCTTCCTCCTCTGAGGGCCGTGCCGCGCTGCCAGATTTGTTCTTCCGCCCCTGCCTCCGCGGCTCGGAGGCGAGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGAATAGAGACAGGGTTTaGCCATCTTGGTCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWNRDRV*PSWSSW
Trigger: CCAGCTTGACCAAGATGGCAAAACCCTGTCTCTATT...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS GCA 90 bp GTTCATGAATTCCTGCACCCCACCCTCTGCATTCATCACCTCGCCTaGGCTTCTTCCCAGCCTTCCTTAGGTCTCCCAGAGCAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: VHEFLHPTLCIHHLA*ASSQPSLGLPEQCP
Trigger: TGGACACTGCTCTGGGAGACCTAAGGAAGGCTGGGAAGAAGCGCAGGCGAGGTGATGAATGCAGAGGGTGGGGTGCAGGAATTCATGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591792.1
CDS-3UTR CAA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGTGGTTCAACACAGATTaGCAACTTGGATTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWWFNTD*QLGFRD
Trigger: GTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCA...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp CCTGGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGTGCAAGTCAGAGATTaGAAAAGAGGCATTAGAGAT +
Preference number: 5 (lower is better)
Translates to: PGRRRLRRTKTCHCTTAWVQVRD*KRGIRD
Trigger: ATCTCTAATGCCTCTTTTCAAATCTCTGACTTGCAC...CCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp GGGAGGCGGAGGTTGCGGCGAACCAAGACGTGCCACTGCACTACAGCCTGGGAGAATATTAAGACACTGTaGTGTACTTTTCCCGTTACG +
Preference number: 5 (lower is better)
Translates to: GRRRLRRTKTCHCTTAWENIKTL*CTFPVT
Trigger: CGTAACGGGAAAAGTACACAACAGTGTCTTAATATT...CTCCCAGGCTGTAGTGCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS GCA 90 bp CTAGGCAACTTGCAAAATGTTCATGAATTCCTGCACCCCACCCTCTaGATTCATCACCTCGCCTGCGCTTCTTCCCAGCCTTCCTTAGGT +
Preference number: 5 (lower is better)
Translates to: LGNLQNVHEFLHPTL*IHHLACASSQPSLG
Trigger: ACCTAAGGAAGGCTGGGAAGAAGCGCAGGCGAGGTGATGAATGCAGAGGGTGGGGTGCAGGAATTCATGAACATTTTGCAAGTTGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591792.1
CDS-3UTR CAA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTATCAAAAGGGCAACCTaGTCCTTCGCCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAIKRAT*SFAKGW
Trigger: CCAGCCTTTGGCGAAGGACAAGGTTGCCCTTTTGAT...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TTGGATTACCAGGATGTGAATGGTAAACACCATGGAATGGGTCTTGCAATGAGTTCCACCAAAGGAGCTTaGAGCTTGGGGTGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: LDYQDVNGKHHGMGLAMSSTKGA*SLGCSR
Trigger: CCGGGAGCACCCCAAGCTCAAAGCTCCTTTGGTGGA...ACTCATTGCAAGACCCATTCCATGGTGTTTACCATTCACATCCTGGTAATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCGCTTGGGAAGATCCTTaGATACCAAGTAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPAWEDP*IPSSCQ
Trigger: CTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS GCA 90 bp GTGCTGCCTGGCATCAGCTTTTGGGAAGTTGGTTCAACACAGATTTaGAACTTGGATTCAGAGACGCCATCAACACTTCTCTGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: VLPGISFWEVGSTQI*NLDSETPSTLLWKL
Trigger: GAGCTTCCAGAGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCCAGGCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345724.7
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp GCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTCAAAAGGATGTCCAGTaGCCCGGCAACACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: AWEDPLIPSSCQFLQVCLQKDVQ*PGNTVS
Trigger: TGAAACTGTGTTGCCGGGCAACTGGACATCCTTTTG...AAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp CCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCTCAGACCTATATGGATTaGGAGCATCAACGGGGACCA +
Preference number: 5 (lower is better)
Translates to: PWPTVDSAQEIQQNILFPQTYMD*EHQRGP
Trigger: TGGTCCCCGTTGATGCTCCAAATCCATATAGGTCTG...AGGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTCAGACCTATATGGATTaGGAGCATCAACGGGGACCA +
Preference number: 5 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAQTYMD*EHQRGP
Trigger: TGGTCCCCGTTGATGCTCCAAATCCATATAGGTCTG...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS TCA 90 bp AAACATCTGCTTCGGCTACTCATTCCATGTCTGGAAGACCAGGACTaGCTAGTGAGCAGAGATCCCAACTCCATGGGTGTTGGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: KHLLRLLIPCLEDQD*LVSRDPNSMGVGFV
Trigger: AACAAAACCAACACCCATGGAGTTGGGATCTCTGCTCACTAGTCAGTCCTGGTCTTCCAGACATGGAATGAGTAGCCGAAGCAGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000589873.5
ENST00000650045.1
ENST00000650355.1
CDS CCA 90 bp CTGGCATCAGCTTTTGGGAAGTTGGTTCAACACAGATTTGCAACTTaGATTCAGAGACGCCATCAACACTTCTCTGGAAGCTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LASAFGKLVQHRFAT*IQRRHQHFSGSSLG
Trigger: TCCCAGAGAGCTTCCAGAGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345724.7
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp CCTCGATGCATGTCTAATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTGCATCAAAAGGGCAACCTaGTCCTTCGCCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PRCMSNLAMRGFPTFTSCIKRAT*SFAKGW
Trigger: CCAGCCTTTGGCGAAGGACAAGGTTGCCCTTTTGAT...GCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATTAGACATGCATCGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CAA 90 bp GCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTATCAAAAGGGCAACCTaGTCCTTCGCTGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: AWEDPLIPSSCQFLQVCLIKRAT*SFAVQS
Trigger: AGATTGGACAGCGAAGGACAAGGTTGCCCTTTTGAT...AAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS GCA 90 bp AAAGATTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTaGTCCTTGACACCTGTAATCCCAGCGACTCAGAAGGCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: KDSICQSRMLDFKSF*SLTPVIPATQKAEA
Trigger: TGCCTCAGCCTTCTGAGTCGCTGGGATTACAGGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000589873.5
ENST00000649125.1
ENST00000649202.1
ENST00000650355.1
CDS-3UTR CAA 90 bp CCTCGATGCATGTCTAATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTGCCAAAAGGATGTCCAGTaGCCCGGCAACACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: PRCMSNLAMRGFPTFTSCQKDVQ*PGNTVS
Trigger: TGAAACTGTGTTGCCGGGCAACTGGACATCCTTTTG...GCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATTAGACATGCATCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATCCACCAAAGGAGCTTaGAGCTTGGGGTGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQASTKGA*SLGCSR
Trigger: CCGGGAGCACCCCAAGCTCAAAGCTCCTTTGGTGGA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAATCCACCAAAGGAGCTTaGAGCTTGGGGTGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNESTKGA*SLGCSR
Trigger: CCGGGAGCACCCCAAGCTCAAAGCTCCTTTGGTGGA...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATTCCACCAAAGGAGCTTaGAGCTTGGGGTGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNSTKGA*SLGCSR
Trigger: CCGGGAGCACCCCAAGCTCAAAGCTCCTTTGGTGGA...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp GGTGGCTGCAGAACTCTGGTAAGGACCATTAGACATAAGACAAGTTTGAAAGCAGCTTGGGAAGATCCTTaGATACCAAGTAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GGCRTLVRTIRHKTSLKAAWEDP*IPSSCQ
Trigger: CTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC...TGCTTTCAAACTTGTCTTATGTCTAATGGTCCTTACCAGAGTTCTGCAGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS CCA 90 bp GAACAGTCATTGGTTCTACTCCTTAGAAAGGCAATGGCAGACAAATaGGATCCAAACCTCCAAACATCTGCTTCGGCTACTCATTCCATG +
Preference number: 5 (lower is better)
Translates to: EQSLVLLLRKAMADK*DPNLQTSASATHSM
Trigger: CATGGAATGAGTAGCCGAAGCAGATGTTTGGAGGTTTGGATCCCATTTGTCTGCCATTGCCTTTCTAAGGAGTAGAACCAATGACTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589873.5
CDS-3UTR CAA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTTCAGCTTTTGGGAAGTaGGTTCAACACAGATTTGCA +
Preference number: 5 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEASAFGK*VQHRFA
Trigger: TGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGA...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp CCGGCTGCAATGACAGCTATCTGCTGGTGTAACATTACTTGGATTACCAGGATGTCAGCTTTTGGGAAGTaGGTTCAACACAGATTTGCA +
Preference number: 5 (lower is better)
Translates to: PAAMTAICWCNITWITRMSAFGK*VQHRFA
Trigger: TGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGA...CATCCTGGTAATCCAAGTAATGTTACACCAGCAGATAGCTGTCATTGCAGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CAA 90 bp GAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCAATCCTGACACCAGTAGGTTCCTaGGTGTTCCAAATCCACATA +
Preference number: 5 (lower is better)
Translates to: EVSQHSLPACPLQYLPILTPVGS*VFQIHI
Trigger: TATGTGGATTTGGAACACCAAGGAACCTACTGGTGT...CAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp GCTACTCATTCCATGTCTGGAAGACCAGGACTGACTAGTGAGCAGAGATCCCAATATCCAAACACAATATaGGCGGTGACTTTTAGTGCA +
Preference number: 5 (lower is better)
Translates to: ATHSMSGRPGLTSEQRSQYPNTI*AVTFSA
Trigger: TGCACTAAAAGTCACCGCCAATATTGTGTTTGGATA...TTGGGATCTCTGCTCACTAGTCAGTCCTGGTCTTCCAGACATGGAATGAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CAA 90 bp GCTACTCATTCCATGTCTGGAAGACCAGGACTGACTAGTGAGCAGAGATCCCAAAGACATAAGACAAGTTaGAAAGCAAGTCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: ATHSMSGRPGLTSEQRSQRHKTS*KASLPS
Trigger: GGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCT...TTGGGATCTCTGCTCACTAGTCAGTCCTGGTCTTCCAGACATGGAATGAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CAA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAATTGGTCAAGCTGGTCTaGAACTCCTGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVELVKLV*NSWAQV
Trigger: CACTTGAGCCCAGGAGTTCAAGACCAGCTTGACCAA...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS TCA 90 bp AACACTTCTCTGGAAGCTCTCTGGGATGTCGCAAACATCCAGCTGTaGCCACTGGCTGAATTCAAAGGTGAAATTGTTATTAACTCGACA +
Preference number: 5 (lower is better)
Translates to: NTSLEALWDVANIQL*PLAEFKGEIVINST
Trigger: TGTCGAGTTAATAACAATTTCACCTTTGAATTCAGCCAGTGGTCACAGCTGGATGTTTGCGACATCCCAGAGAGCTTCCAGAGAAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345724.7
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTCCTTGACACGACACCAGTAGGTTCCTaGGTGTTCCAAATCCACATA +
Preference number: 5 (lower is better)
Translates to: FHLPIQNAGFQKLLLLDTTPVGS*VFQIHI
Trigger: TATGTGGATTTGGAACACCAAGGAACCTACTGGTGT...CGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp GCTTGGGAAGATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTTAGTGCATCCAAGATaGGAATGGTATCATCGTAGT +
Preference number: 5 (lower is better)
Translates to: AWEDPLIPSSCQFLQVCLLVHPR*EWYHRS
Trigger: ACTACGATGATACCATTCCAATCTTGGATGCACTAA...AAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp GCCTTGGCCCACTGTAGATTCCGCACAAGAGATTCAGCAGAATATTCTGTTCCCCAGGTGTGCCTTTATTaGCATCTTTTGGATCAATAT +
Preference number: 5 (lower is better)
Translates to: ALAHCRFRTRDSAEYSVPQVCLY*HLLDQY
Trigger: ATATTGATCCAAAAGATGCAAATAAAGGCACACCTG...GGGAACAGAATATTCTGCTGAATCTCTTGTGCGGAATCTACAGTGGGCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp CTGTTTGCCTTTGGTAAGGTGACACTTACCCATATCTTCTGCAACTTCATCCAGACATTCACTTCCTGCTaGTCCTCTACAGTATCTTCC +
Preference number: 5 (lower is better)
Translates to: LFAFGKVTLTHIFCNFIQTFTSC*SSTVSS
Trigger: GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGT...CTGGATGAAGTTGCAGAAGATATGGGTAAGTGTCACCTTACCAAAGGCAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAATCAAAAGGGCAACCTaGTCCTTCGCCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAIKRAT*SFAKGW
Trigger: CCAGCCTTTGGCGAAGGACAAGGTTGCCCTTTTGAT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp GAAATGACTGGAGGGTGGAAATGGCAGGGGCAATTCTGTGTAGTACAAGAAGCTCAGGTGTGCCTTTATTaGCATCTTTTGGATCAATAT +
Preference number: 5 (lower is better)
Translates to: EMTGGWKWQGQFCVVQEAQVCLY*HLLDQY
Trigger: ATATTGATCCAAAAGATGCAAATAAAGGCACACCTG...AGCTTCTTGTACTACACAGAATTGCCCCTGCCATTTCCACCCTCCAGTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp GATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATACATTCACTTCCTGCTaGTCCTCTACAGTATCTTCC +
Preference number: 5 (lower is better)
Translates to: DPLIPSSCQFLQVCLYLHTFTSC*SSTVSS
Trigger: GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGT...ATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp GAGGTTTCCCAACATTCACTTCCTGCTTGTCCTCTACAGTATCTTCCAATCCTGATGGTATTTCATCAGTaGTCTCTACTGGCACATTAC +
Preference number: 5 (lower is better)
Translates to: EVSQHSLPACPLQYLPILMVFHQ*SLLAHY
Trigger: GTAATGTGCCAGTAGAGACAACTGATGAAATACCAT...CAGGATTGGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGTTGGGAAACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACAAAAGGATGTCCAGTaGCCCGGCAACACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAQKDVQ*PGNTVS
Trigger: TGAAACTGTGTTGCCGGGCAACTGGACATCCTTTTG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATCAAAAGGATGTCCAGTaGCCCGGCAACACAGTTTCA +
Preference number: 5 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNQKDVQ*PGNTVS
Trigger: TGAAACTGTGTTGCCGGGCAACTGGACATCCTTTTG...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACAGACCTATATGGATTaGGAGCATCAACGGGGACCA +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAQTYMD*EHQRGP
Trigger: TGGTCCCCGTTGATGCTCCAAATCCATATAGGTCTG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp AAGTCCAGCTGTCTCAGTAAGTTAGTCAATTCGTACACATCCACCAAAGGAGCTTATCCAAACACAATATaGGCGGTGACTTTTAGTGCA +
Preference number: 5 (lower is better)
Translates to: KSSCLSKLVNSYTSTKGAYPNTI*AVTFSA
Trigger: TGCACTAAAAGTCACCGCCAATATTGTGTTTGGATA...AGCTCCTTTGGTGGATGTGTACGAATTGACTAACTTACTGAGACAGCTGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGCTTGGGAAGATCCTTaGATACCAAGTAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAAWEDP*IPSSCQ
Trigger: CTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAAGCTTGGGAAGATCCTTaGATACCAAGTAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNEAWEDP*IPSSCQ
Trigger: CTGGCAGCTACTTGGTATCAAAGGATCTTCCCAAGC...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp CCTCGATGCATGTCTAATTTAGCAATGAGAGGTTTCCCAACATTCACTTCCTGCAGACATAAGACAAGTTaGAAAGCAAGTCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: PRCMSNLAMRGFPTFTSCRHKTS*KASLPS
Trigger: GGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCT...GCAGGAAGTGAATGTTGGGAAACCTCTCATTGCTAAATTAGACATGCATCGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATCAGGGTTTTGCCATCTaGGTCAAGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNQGFAI*VKLVLN
Trigger: GTTCAAGACCAGCTTGACCAAGATGGCAAAACCCTG...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATGGGTGAGCCTTTACTaGCTCAAACCTCCACTATCC +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAWVSLY*LKPPLS
Trigger: GGATAGTGGAGGTTTGAGCAAGTAAAGGCTCACCCA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAACTTGAAGACAGGTGTTaGAGACCAGCATGGGCAACA +
Preference number: 5 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNELEDRC*RPAWAT
Trigger: TGTTGCCCATGCTGGTCTCAAACACCTGTCTTCAAG...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAATGGTTCAACACAGATTaGCAACTTGGATTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVEWFNTD*QLGFRD
Trigger: GTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCA...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGCCAAAGGCTGGTCAGTaGTTTGCTCTTTATTATCAG +
Preference number: 5 (lower is better)
Translates to: TLSTNITLISEPVRKAVVPKAGQ*FALYYQ
Trigger: CTGATAATAAAGAGCAAACAACTGACCAGCCTTTGG...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATTGTCCCAGCACCGTTaGTTGAAAAGACCACTCCTT +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQALSQHR*LKRPLL
Trigger: AAGGAGTGGTCTTTTCAACAAACGGTGCTGGGACAA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp GATCCTTTGATACCAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCCATGGGTGTTGGTTTaGTTAATTCCTTTTCCTACA +
Preference number: 5 (lower is better)
Translates to: DPLIPSSCQFLQVCLYLHPWVLV*LIPFPT
Trigger: TGTAGGAAAAGGAATTAACAAAACCAACACCCATGG...ATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTGGTATCAAAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACACAGATTTGCAACTaGGATTCAGAGACGCCATCA +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATQICN*DSETPS
Trigger: TGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGACACAGATTTGCAACTaGGATTCAGAGACGCCATCA +
Preference number: 5 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLTQICN*DSETPS
Trigger: TGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGT...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TTCATAAAGATTCCATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTGCTACACAGATTTGCAACTaGGATTCAGAGACGCCATCA +
Preference number: 5 (lower is better)
Translates to: FIKIPFANPECWISKASATQICN*DSETPS
Trigger: TGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGT...AGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAATGGAATCTTTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACACCAGTAGGTTCCTaGGTGTTCCAAATCCACATA +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATPVGS*VFQIHI
Trigger: TATGTGGATTTGGAACACCAAGGAACCTACTGGTGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAATTAGTGCATCCAAGATaGGAATGGTATCATCGTAGT +
Preference number: 5 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVELVHPR*EWYHRS
Trigger: ACTACGATGATACCATTCCAATCTTGGATGCACTAA...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATTTAGTGCATCCAAGATaGGAATGGTATCATCGTAGT +
Preference number: 5 (lower is better)
Translates to: QVAASFFRCAFICIFWINLVHPR*EWYHRS
Trigger: ACTACGATGATACCATTCCAATCTTGGATGCACTAA...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAACATTCACTTCCTGCTaGTCCTCTACAGTATCTTCC +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQATFTSC*SSTVSS
Trigger: GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAAGACATAAGACAAGTTaGAAAGCAAGTCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVERHKTS*KASLPS
Trigger: GGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCT...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAAATGGTATTTCATCAGTaGTCTCTACTGGCACATTAC +
Preference number: 5 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVEMVFHQ*SLLAHY
Trigger: GTAATGTGCCAGTAGAGACAACTGATGAAATACCAT...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS TCA 90 bp ACATCAAATGTTCTTACGTGGCATATCCAAACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGATTGGAATGGTATCATCGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: TSNVLTWHIQTQYWR*LLVHPRLEWYHRSH
Trigger: ATGACTACGATGATACCATTCCAATCTTGGATGCACTAAAAGTCACCGCCAATATTGTGTTTGGATATGCCACGTAAGAACATTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589873.5
ENST00000649202.1
CDS CCA 90 bp CTGGCATCAGCTTTTGGGAAGTTGGTTCAACACAGATTTGCAACTTaGATTCAGAGACGCCATCAACACTTCCTTAAATTAAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: LASAFGKLVQHRFAT*IQRRHQHFLKLKEK
Trigger: TTTTTCTTTTAATTTAAGGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649125.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATGGTTCAACACAGATTaGCAACTTGGATTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAWFNTD*QLGFRD
Trigger: GTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATCAGCTTTTGGGAAGTaGGTTCAACACAGATTTGCA +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQASAFGK*VQHRFA
Trigger: TGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTACACCAGTAGGTTCCTaGGTGTTCCAAATCCACATA +
Preference number: 5 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLTPVGS*VFQIHI
Trigger: TATGTGGATTTGGAACACCAAGGAACCTACTGGTGT...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp CAAGTAGCTGCCAGTTTCTTCAGGTGTGCCTTTATTTGCATCTTTTGGATCAATTACCTTCTTGCTATCTaGACTGTCTCGATCATTATA +
Preference number: 5 (lower is better)
Translates to: QVAASFFRCAFICIFWINYLLAI*TVSIII
Trigger: TATAATGATCGAGACAGTCAAGATAGCAAGAAGGTA...ATTGATCCAAAAGATGCAAATAAAGGCACACCTGAAGAAACTGGCAGCTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACCAAAGGCTGGTCAGTaGTTTGCTCTTTATTATCAG +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAPKAGQ*FALYYQ
Trigger: CTGATAATAAAGAGCAAACAACTGACCAGCCTTTGG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATCCAAAGGCTGGTCAGTaGTTTGCTCTTTATTATCAG +
Preference number: 5 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNPKAGQ*FALYYQ
Trigger: CTGATAATAAAGAGCAAACAACTGACCAGCCTTTGG...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTACATTCACTTCCTGCTaGTCCTCTACAGTATCTTCC +
Preference number: 5 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVTFTSC*SSTVSS
Trigger: GGAAGATACTGTAGAGGACAAGCAGGAAGTGAATGT...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGTAGTGGAATTTATAACCCTCAAATaGATATCCGTGGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: YKHNTYLRTCQEGSCVVEFITLK*ISVALL
Trigger: CAAAAGTGCCACGGATATCAATTTGAGGGTTATAAA...TTCCACTACACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp ACTCTATCTACAAACATAACACTTATCTCAGAACCTGTCAGGAAGGCAGTTGTGCTTGTTGAAAACAAGTaGACCAGAAATGTATGGGTT +
Preference number: 5 (lower is better)
Translates to: TLSTNITLISEPVRKAVVLVENK*TRNVWV
Trigger: AACCCATACATTTCTGGTCAACTTGTTTTCAACAAG...CACAACTGCCTTCCTGACAGGTTCTGAGATAAGTGTTATGTTTGTAGATAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTACCACTCCTTCTCTATaGATGGTATTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVTTPSL*MVLASL
Trigger: CAAGGATGCCAATACCATCAATAGAGAAGGAGTGGT...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAGTATTGGCTTTGAATTaGGGTGAGCCTTTACTTGCT +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAVLALN*GEPLLA
Trigger: AGCAAGTAAAGGCTCACCCAAATTCAAAGCCAATAC...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp GATAAAATTAGGTTATGCCTGGTGATCGGCAAGGTTCTTTCTGGTGTTAAAAATTCTCAGCATCAAGTATaGGCTTTGAATTTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: DKIRLCLVIGKVLSGVKNSQHQV*ALNLGE
Trigger: CTCACCCAAATTCAAAGCCAATACTTGATGCTGAGA...ATTTTTAACACCAGAAAGAACCTTGCCGATCACCAGGCATAACCTAATTTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp ATTAGACATAAGACAAGTTTGAAAGCAAGTCTTCCTTCCCAAACCTCGATGCATTACCTTCTTGCTATCTaGACTGTCTCGATCATTATA +
Preference number: 5 (lower is better)
Translates to: IRHKTSLKASLPSQTSMHYLLAI*TVSIII
Trigger: TATAATGATCGAGACAGTCAAGATAGCAAGAAGGTA...ATGCATCGAGGTTTGGGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648670.1
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATTAGTGCATCCAAGATaGGAATGGTATCATCGTAGT +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQALVHPR*EWYHRS
Trigger: ACTACGATGATACCATTCCAATCTTGGATGCACTAA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATATCCAAACACAATATaGGCGGTGACTTTTAGTGCA +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAYPNTI*AVTFSA
Trigger: TGCACTAAAAGTCACCGCCAATATTGTGTTTGGATA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TATTCTACAATAATGCCATTCCCATTGCTCTTACTTCAGAGTGGTCACAATGAATATCCAAACACAATATaGGCGGTGACTTTTAGTGCA +
Preference number: 5 (lower is better)
Translates to: YSTIMPFPLLLLQSGHNEYPNTI*AVTFSA
Trigger: TGCACTAAAAGTCACCGCCAATATTGTGTTTGGATA...TTCATTGTGACCACTCTGAAGTAAGAGCAATGGGAATGGCATTATTGTAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAAGACATAAGACAAGTTaGAAAGCAAGTCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQARHKTS*KASLPS
Trigger: GGAAGGAAGACTTGCTTTCAAACTTGTCTTATGTCT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCAATGGTATTTCATCAGTaGTCTCTACTGGCACATTAC +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAMVFHQ*SLLAHY
Trigger: GTAATGTGCCAGTAGAGACAACTGATGAAATACCAT...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGGATGTTGAACCAACCTaGAATTCCTGGGATAAATTC +
Preference number: 5 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLDVEPT*NSWDKF
Trigger: GAATTTATCCCAGGAATTCAAGGTTGGTTCAACATC...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTATATCCGTGGCACTTTaGCAGTCATTTGTGGATATG +
Preference number: 5 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLISVAL*QSFVDM
Trigger: CATATCCACAAATGACTGCAAAAGTGCCACGGATAT...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGCCATTTATCTACTGTTaGCCTTTGTTGCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLPFIYC*PLLLVL
Trigger: AAGCACAAGCAACAAAGGCAAACAGTAGATAAATGG...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp GTTGATGCTTTTCAAAATGCTGGCACTTTAGAGGAATGGTCTTATTTAGTACTGACCTTTAGAGCTGTTTaGCGGGATAGATACATAACA +
Preference number: 5 (lower is better)
Translates to: VDAFQNAGTLEEWSYLVLTFRAV*RDRYIT
Trigger: TGTTATGTATCTATCCCGCAAAACAGCTCTAAAGGT...CAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATTTGAACCACTGATATaGAACAAAAGGATGTCCAGT +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAFEPLI*NKRMSS
Trigger: ACTGGACATCCTTTTGTTCAATATCAGTGGTTCAAA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCATACCTTCTTGCTATCTaGACTGTCTCGATCATTATA +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAYLLAI*TVSIII
Trigger: TATAATGATCGAGACAGTCAAGATAGCAAGAAGGTA...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp GGCGCTAAAGTTAATTTTGATGAAGTCCCATTTATCTACTGTTTGCCTTTGTTGTACCTTCTTGCTATCTaGACTGTCTCGATCATTATA +
Preference number: 5 (lower is better)
Translates to: GAKVNFDEVPFIYCLPLLYLLAI*TVSIII
Trigger: TATAATGATCGAGACAGTCAAGATAGCAAGAAGGTA...CAACAAAGGCAAACAGTAGATAAATGGGACTTCATCAAAATTAACTTTAGCGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TTTGCCTTTTCACAATGTCTCACTTTATGTAAGTGCAGTACTATTTCACAGGCACAGGTGTGCCTTTATTaGCATCTTTTGGATCAATAT +
Preference number: 5 (lower is better)
Translates to: FAFSQCLTLCKCSTISQAQVCLY*HLLDQY
Trigger: ATATTGATCCAAAAGATGCAAATAAAGGCACACCTG...TGCCTGTGAAATAGTACTGCACTTACATAAAGTGAGACATTGTGAAAAGGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS-3UTR CAA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTATGGTATTTCATCAGTaGTCTCTACTGGCACATTAC +
Preference number: 5 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVMVFHQ*SLLAHY
Trigger: GTAATGTGCCAGTAGAGACAACTGATGAAATACCAT...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTCTAATTTGGGCAGCATaGCCATCTTACCAATATTCA +
Preference number: 5 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLLIWAA*PSYQYS
Trigger: TGAATATTGGTAAGATGGCAATGCTGCCCAAATTAG...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTGTTTGCCTTTGTTGCTaGTGCTTTTGGTATTATGTC +
Preference number: 5 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVVCLCC*CFWYYV
Trigger: GACATAATACCAAAAGCACAAGCAACAAAGGCAAAC...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTCATCAAGTATTGGCTTaGAATTTGGGTGAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVHQVLA*NLGEPL
Trigger: TAAAGGCTCACCCAAATTCAAAGCCAATACTTGATG...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp ATGGTCTTATTTAGTACTGCCAGCTCTGGAAAGTATTATAAGCTCTTTGATGTTTCTCTATTGATGGTATaGGCATCCTTGTTGAAAACA +
Preference number: 5 (lower is better)
Translates to: MVLFSTASSGKYYKLFDVSLLMV*ASLLKT
Trigger: TGTTTTCAACAAGGATGCCAATACCATCAATAGAGA...AACATCAAAGAGCTTATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS-3UTR CAA 90 bp TATTGTAGCTTGGTAGCACTTTTTGAAATTGGTACGTCTTCCAACTTTGTTCTTAGTATTATAAGCTCTTaGATGTTACAGCATCATCCC +
Preference number: 5 (lower is better)
Translates to: YCSLVALFEIGTSSNFVLSIISS*MLQHHP
Trigger: GGGATGATGCTGTAACATCAAAGAGCTTATAATACT...AAGAACAAAGTTGGAAGACGTACCAATTTCAAAAAGTGCTACCAAGCTACAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS CAA 72 bp TCGCTGAGCCTCCGCAGCAGCGGCTCCCGCAGGCGGTaGAGGGTCGCGCCGGCCGGAGGGGCGAGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: SLSLRSSGSRRR*RVAPAGGASSG
Trigger: GCCGCTGCTCGCCCCTCCGGCCGGCGCGACCCTCAACCGCCTGCGGGAGCCGCTGCTGCGGAGGCTCAGCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS CCA 72 bp CTCCGAGCCGCGGAGGCAGGGGCGGAAGAACAAATCTaGCAGCGCGGCACGGCCCTCAGAGGAGGAAGCTCC +
Preference number: 6 (lower is better)
Translates to: LRAAEAGAEEQI*QRGTALRGGSS
Trigger: GGAGCTTCCTCCTCTGAGGGCCGTGCCGCGCTGCCAGATTTGTTCTTCCGCCCCTGCCTCCGCGGCTCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649217.2
CDS GCA 72 bp GGGCTTCCTTCAGGCTCCAGTACCTTAAGAGAACACTaGTCCAGGTCTAGGCAACTGAGGCGGAGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: GLPSGSSTLREH*SRSRQLRRRRP
Trigger: CGGGCGCCTCCGCCTCAGTTGCCTAGACCTGGAGCAGTGTTCTCTTAAGGTACTGGAGCCTGAAGGAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345724.7
ENST00000649217.2
ENST00000650045.1
CDS GCA 72 bp GGTGACAGAGTTAAGACCCCTGCTCCTCCAAACATCTaGTTCGGCTACTCATTCCATGTCTGGAAGACCAGG +
Preference number: 6 (lower is better)
Translates to: GDRVKTPAPPNI*FGYSFHVWKTR
Trigger: CCTGGTCTTCCAGACATGGAATGAGTAGCCGAAGCAGATGTTTGGAGGAGCAGGGGTCTTAACTCTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650355.1
CDS CAA 90 bp CCTGGCATCAGCTTTTGGGAAGTTGGTTCAACACAGATTTGCAACTaGGATTCAGAGACGCCATCAACACTTCTCTGGAAGCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: PGISFWEVGSTQICN*DSETPSTLLWKLSG
Trigger: CCCAGAGAGCTTCCAGAGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345724.7
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS GCA 72 bp AATGGCAGACAAATGGGATCCAAACCTCCAAACATCTaGTTCGGCTACTCATTCCATGTCTGGAAGACCAGG +
Preference number: 6 (lower is better)
Translates to: NGRQMGSKPPNI*FGYSFHVWKTR
Trigger: CCTGGTCTTCCAGACATGGAATGAGTAGCCGAAGCAGATGTTTGGAGGTTTGGATCCCATTTGTCTGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589873.5
CDS CAA 90 bp TGTGCTGCCTGGCATCAGCTTTTGGGAAGTTGGTTCAACACAGATTaGCAACTTGGATTCAGAGACGCCATCAACACTTCTCTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: CAAWHQLLGSWFNTD*QLGFRDAINTSLEA
Trigger: AGCTTCCAGAGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCCAGGCAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345724.7
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS CAA 90 bp CACACTGTAAAACCAATGTGCTGCCTGGCATCAGCTTTTGGGAAGTaGGTTCAACACAGATTTGCAACTTGGATTCAGAGACGCCATCAA +
Preference number: 6 (lower is better)
Translates to: HTVKPMCCLASAFGK*VQHRFATWIQRRHQ
Trigger: TTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCCAGGCAGCACATTGGTTTTACAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000345724.7
ENST00000649125.1
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS TCA 72 bp CTGGAAGCTCTCTGGGATGTCGCAAACATCCAGCTGTaGCCACTGGCTGAATTCAAAGGTGAAATTGTTATT +
Preference number: 6 (lower is better)
Translates to: LEALWDVANIQL*PLAEFKGEIVI
Trigger: AATAACAATTTCACCTTTGAATTCAGCCAGTGGTCACAGCTGGATGTTTGCGACATCCCAGAGAGCTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345724.7
ENST00000648670.1
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS GCA 72 bp GGCATCAGCTTTTGGGAAGTTGGTTCAACACAGATTTaGAACTTGGATTCAGAGACGCCATCAACACTTCTC +
Preference number: 6 (lower is better)
Translates to: GISFWEVGSTQI*NLDSETPSTLL
Trigger: GAGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345724.7
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS GCA 72 bp ATTTGCCAATCCAGAATGCTGGATTTCAAAAGCTTCTaGTCCTTGACACCTGTAATCCCAGCGACTCAGAAG +
Preference number: 6 (lower is better)
Translates to: ICQSRMLDFKSF*SLTPVIPATQK
Trigger: CTTCTGAGTCGCTGGGATTACAGGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTGGATTGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000589873.5
ENST00000649125.1
ENST00000649202.1
ENST00000650355.1
CDS GCA 72 bp GGCATCAGCTTTTGGGAAGTTGGTTCAACACAGATTTaGAACTTGGATTCAGAGACGCCATCAACACTTCCT +
Preference number: 6 (lower is better)
Translates to: GISFWEVGSTQI*NLDSETPSTLP
Trigger: AGGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649125.1
CDS CCA 72 bp GCTTTTGGGAAGTTGGTTCAACACAGATTTGCAACTTaGATTCAGAGACGCCATCAACACTTCTCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: AFGKLVQHRFAT*IQRRHQHFSGS
Trigger: GCTTCCAGAGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345724.7
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS CCA 72 bp TTGGTTCTACTCCTTAGAAAGGCAATGGCAGACAAATaGGATCCAAACCTCCAAACATCTGCTTCGGCTACT +
Preference number: 6 (lower is better)
Translates to: LVLLLRKAMADK*DPNLQTSASAT
Trigger: AGTAGCCGAAGCAGATGTTTGGAGGTTTGGATCCCATTTGTCTGCCATTGCCTTTCTAAGGAGTAGAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589873.5
CDS CAA 72 bp TGGCATCAGCTTTTGGGAAGTTGGTTCAACACAGATTaGCAACTTGGATTCAGAGACGCCATCAACACTTCC +
Preference number: 6 (lower is better)
Translates to: WHQLLGSWFNTD*QLGFRDAINTS
Trigger: GGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649125.1
CDS CAA 90 bp ATCTTGACTGTCTCGATCATTATATACATGACACCAGTAGGTTCCTaGGTGTTCCAAATCCACATAAGGCACTCTGGAAGCTCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: ILTVSIIIYMTPVGS*VFQIHIRHSGSSLG
Trigger: TCCCAGAGAGCTTCCAGAGTGCCTTATGTGGATTTGGAACACCAAGGAACCTACTGGTGTCATGTATATAATGATCGAGACAGTCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS GCA 72 bp TTTGAACCACTGATATTGAACAAAAGGATGTCCAGTTaGCCGGCAACACAGTTTCACAAACTGTCCAGCCAA +
Preference number: 6 (lower is better)
Translates to: FEPLILNKRMSS*PATQFHKLSSQ
Trigger: TTGGCTGGACAGTTTGTGAAACTGTGTTGCCGGGCAACTGGACATCCTTTTGTTCAATATCAGTGGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345724.7
ENST00000591792.1
ENST00000648670.1
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS CCA 72 bp AGGAACAGTCATTGGTTCTACTCCTTAGAAAGGCAATaGCAGACAAATGGGATCCAAACCTCCAAACATCTG +
Preference number: 6 (lower is better)
Translates to: RNSHWFYSLERQ*QTNGIQTSKHL
Trigger: CAGATGTTTGGAGGTTTGGATCCCATTTGTCTGCCATTGCCTTTCTAAGGAGTAGAACCAATGACTGTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589873.5
CDS CAA 72 bp AGCTTTTGGGAAGTTGGTTCAACACAGATTTGCAACTaGGATTCAGAGACGCCATCAACACTTCTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SFWEVGSTQICN*DSETPSTLLWK
Trigger: CTTCCAGAGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345724.7
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS CAA 72 bp TGGCATCAGCTTTTGGGAAGTTGGTTCAACACAGATTaGCAACTTGGATTCAGAGACGCCATCAACACTTCT +
Preference number: 6 (lower is better)
Translates to: WHQLLGSWFNTD*QLGFRDAINTS
Trigger: AGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGCTGATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345724.7
ENST00000649202.1
ENST00000649217.2
ENST00000650045.1
CDS CAA 72 bp GTCTCGATCATTATATACATGACACCAGTAGGTTCCTaGGTGTTCCAAATCCACATAAGGCACTCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: VSIIIYMTPVGS*VFQIHIRHSGS
Trigger: GCTTCCAGAGTGCCTTATGTGGATTTGGAACACCAAGGAACCTACTGGTGTCATGTATATAATGATCGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648670.1
CDS CAA 90 bp TGCCTCATCTGTTCTTCCTATGATGATTTCTACCTTCTTGCTATCTaGACTGTCTCGATCATTATATACATGACACCAGTAGGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: CLICSSYDDFYLLAI*TVSIIIYMTPVGSL
Trigger: CAAGGAACCTACTGGTGTCATGTATATAATGATCGAGACAGTCAAGATAGCAAGAAGGTAGAAATCATCATAGGAAGAACAGATGAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648670.1
ENST00000649125.1
ENST00000649217.2
ENST00000650045.1
CDS TCA 72 bp GTTCTTACGTGGCATATCCAAACACAATATTGGCGGTaGCTTTTAGTGCATCCAAGATTGGAATGGTATCAT +
Preference number: 6 (lower is better)
Translates to: VLTWHIQTQYWR*LLVHPRLEWYH
Trigger: ATGATACCATTCCAATCTTGGATGCACTAAAAGTCACCGCCAATATTGTGTTTGGATATGCCACGTAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589873.5
ENST00000649202.1
CDS CCA 72 bp GCTTTTGGGAAGTTGGTTCAACACAGATTTGCAACTTaGATTCAGAGACGCCATCAACACTTCCTTAAATTA +
Preference number: 6 (lower is better)
Translates to: AFGKLVQHRFAT*IQRRHQHFLKL
Trigger: TAATTTAAGGAAGTGTTGATGGCGTCTCTGAATCCAAGTTGCAAATCTGTGTTGAACCAACTTCCCAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649125.1
CDS CAA 72 bp GTCTCGATCATTATATACATGACACCAGTAGGTTCCTaGGTGTTCCAAATCCACATAAGGCACCTATATCAA +
Preference number: 6 (lower is better)
Translates to: VSIIIYMTPVGS*VFQIHIRHLYQ
Trigger: TTGATATAGGTGCCTTATGTGGATTTGGAACACCAAGGAACCTACTGGTGTCATGTATATAATGATCGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649125.1
CDS CAA 90 bp AACGTAAACATCAAATGTTCTTACGTGGCATATCCAAACACAATATaGGCGGTGACTTTTAGTGCATCCAAGATTGGAATGGTATCATCG +
Preference number: 6 (lower is better)
Translates to: NVNIKCSYVAYPNTI*AVTFSASKIGMVSS
Trigger: CGATGATACCATTCCAATCTTGGATGCACTAAAAGTCACCGCCAATATTGTGTTTGGATATGCCACGTAAGAACATTTGATGTTTACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589873.5
ENST00000649202.1
CDS CAA 72 bp ATCAAATGTTCTTACGTGGCATATCCAAACACAATATaGGCGGTGACTTTTAGTGCATCCAAGATTGGAATG +
Preference number: 6 (lower is better)
Translates to: IKCSYVAYPNTI*AVTFSASKIGM
Trigger: CATTCCAATCTTGGATGCACTAAAAGTCACCGCCAATATTGTGTTTGGATATGCCACGTAAGAACATTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589873.5
ENST00000649202.1
CDS CAA 72 bp TGTTCTTCCTATGATGATTTCTACCTTCTTGCTATCTaGACTGTCTCGATCATTATATACATGACACCAGTA +
Preference number: 6 (lower is better)
Translates to: CSSYDDFYLLAI*TVSIIIYMTPV
Trigger: TACTGGTGTCATGTATATAATGATCGAGACAGTCAAGATAGCAAGAAGGTAGAAATCATCATAGGAAGAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648670.1
ENST00000649125.1
ENST00000649217.2
ENST00000650045.1