Pregenerated sensors for MALINC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000245146Ensembl transcript IDs: ENST00000499203.7, ENST00000518790.2, ENST00000521133.1, ENST00000521563.6, ENST00000522747.6, ENST00000523452.5, ENST00000653092.1, ENST00000654348.1, ENST00000656599.1, ENST00000659306.1, ENST00000659960.1, ENST00000660071.1, ENST00000663778.1, ENST00000668151.1, ENST00000671132.1, ENST00000671248.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGCACGGAGCGCCGGGTTACGCGCCGACGTCTGGCTGCCACGACTTaGCGTCTGCGGCGGCGGCGGCGGCGGCGAGCGGATCCCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTERRVTRRRLAATT*RLRRRRRRRADPAG Trigger: CCCTGCGGGATCCGCTCGCCGCCGCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAACCCGGCGCTCCGTGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS GCA 90 bp | AGCGCCGGGTTACGCGCCGACGTCTGGCTGCCACGACTTGCCGTCTaGGGCGGCGGCGGCGGCGGCGAGCGGATCCCGCAGGGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAGLRADVWLPRLAV*GGGGGGERIPQGKE Trigger: CTCCTTCCCCTGCGGGATCCGCTCGCCGCCGCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAACCCGGCGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS GCA 90 bp | CCTGGAGTCACGCACGGAGCGCCGGGTTACGCGCCGACGTCTGGCTaGCACGACTTGCCGTCTGCGGCGGCGGCGGCGGCGGCGAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PGVTHGAPGYAPTSG*HDLPSAAAAAAASG Trigger: TCCGCTCGCCGCCGCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAACCCGGCGCTCCGTGCGTGACTCCAGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CCA 90 bp | GTCGCCTGGAGTCACGCACGGAGCGCCGGGTTACGCGCCGACGTCTaGCTGCCACGACTTGCCGTCTGCGGCGGCGGCGGCGGCGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAWSHARSAGLRADV*LPRLAVCGGGGGGE Trigger: CTCGCCGCCGCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAACCCGGCGCTCCGTGCGTGACTCCAGGCGAC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS TCA 90 bp | GAGCCACGGAGTTGGGAGGAGGGGTGGGGAACGCGGAGCGCGCGCTaGCGTCGCCTGGAGTCACGCACGGAGCGCCGGGTTACGCGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EPRSWEEGWGTRSAR*RRLESRTERRVTRR Trigger: TCGGCGCGTAACCCGGCGCTCCGTGCGTGACTCCAGGCGACGTCAGCGCGCGCTCCGCGTTCCCCACCCCTCCTCCCAACTCCGTGGCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CCA 90 bp | GTTGGGAGGAGGGGTGGGGAACGCGGAGCGCGCGCTGACGTCGCCTaGAGTCACGCACGGAGCGCCGGGTTACGCGCCGACGTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGRRGGERGARADVA*SHARSAGLRADVWL Trigger: CAGCCAGACGTCGGCGCGTAACCCGGCGCTCCGTGCGTGACTCCAGGCGACGTCAGCGCGCGCTCCGCGTTCCCCACCCCTCCTCCCAAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CCA 90 bp | GCTGTGAGTGAGCGGGAGAAGCAGGGTGTGAGCCGGACTTGCCCATaGGAGGGAGAGCGAGCGAGAGCCGAGCCAGCCATCCGAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVSEREKQGVSRTCP*EGERARAEPAIRAA Trigger: GGCGGCTCGGATGGCTGGCTCGGCTCTCGCTCGCTCTCCCTCCCATGGGCAAGTCCGGCTCACACCCTGCTTCTCCCGCTCACTCACAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS TCA 90 bp | CGCAGGGGAAGGAGGAGGAGGAGGGAGAGCCAAGGGGGCTGTGAGTaGGCGGGAGAAGCAGGGTGTGAGCCGGACTTGCCCATGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRGRRRRRESQGGCE*AGEAGCEPDLPMGG Trigger: CCCTCCCATGGGCAAGTCCGGCTCACACCCTGCTTCTCCCGCTCACTCACAGCCCCCTTGGCTCTCCCTCCTCCTCCTCCTTCCCCTGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS GCA 90 bp | AAGGGGGCTGTGAGTGAGCGGGAGAAGCAGGGTGTGAGCCGGACTTaGCCATGGGAGGGAGAGCGAGCGAGAGCCGAGCCAGCCATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KGAVSEREKQGVSRT*PWEGERARAEPAIR Trigger: TCGGATGGCTGGCTCGGCTCTCGCTCGCTCTCCCTCCCATGGGCAAGTCCGGCTCACACCCTGCTTCTCCCGCTCACTCACAGCCCCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CCA 90 bp | GTGGTAGCAGAAGTCGCAACGACGCACAGGGCCCTAAGTTGGAGCTaGCGCAGGCCCTTCAGGGTTCTATCCCCGCCAGAGCCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVAEVATTHRALSWS*RRPFRVLSPPEPGF Trigger: GAAGCCAGGCTCTGGCGGGGATAGAACCCTGAAGGGCCTGCGCCAGCTCCAACTTAGGGCCCTGTGCGTCGTTGCGACTTCTGCTACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS GCA 90 bp | CAGCGGCTGAGGCAGGAGAATCACTCGAGCTGGGGAAGTGGAGGTTaGAGTGAGCCAAGATCGCGCCGCTGCACTTCAGCCTGGACGACA | + |
|
Preference number: 5 (lower is better) Translates to: QRLRQENHSSWGSGG*SEPRSRRCTSAWTT Trigger: TGTCGTCCAGGCTGAAGTGCAGCGGCGCGATCTTGGCTCACTGCAACCTCCACTTCCCCAGCTCGAGTGATTCTCCTGCCTCAGCCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000523452.5 ENST00000663778.1 |
||
| CDS CCA 90 bp | GATAGGGTGGTAGCAGAAGTCGCAACGACGCACAGGGCCCTAAGTTaGAGCTGGCGCAGGCCCTTCAGGGTTCTATCCCCGCCAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DRVVAEVATTHRALS*SWRRPFRVLSPPEP Trigger: AGGCTCTGGCGGGGATAGAACCCTGAAGGGCCTGCGCCAGCTCCAACTTAGGGCCCTGTGCGTCGTTGCGACTTCTGCTACCACCCTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS CCA 90 bp | TTGGAGCTGGCGCAGGCCCTTCAGGGTTCTATCCCCGCCAGAGCCTaGCTTCGGCCTTCAGAAGCCAAACGAGTAATAGGTCCTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LELAQALQGSIPARA*LRPSEAKRVIGPSG Trigger: CCCAGAAGGACCTATTACTCGTTTGGCTTCTGAAGGCCGAAGCCAGGCTCTGGCGGGGATAGAACCCTGAAGGGCCTGCGCCAGCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000522747.6 ENST00000653092.1 ENST00000654348.1 |
||
| CDS CCA 90 bp | CCCTTTGGTGCTGACATCGCAGATGAAGCCGGGCCCAAAGATGGGTaGCCCGAACAAGGCATTTTTACTGCCCCACAGCGCTGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PFGADIADEAGPKDG*PEQGIFTAPQRWVS Trigger: GCTGACCCAGCGCTGTGGGGCAGTAAAAATGCCTTGTTCGGGCCACCCATCTTTGGGCCCGGCTTCATCTGCGATGTCAGCACCAAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671132.1 |
||
| CDS CCA 90 bp | CGTGGGAGGCTGGGCAGCAACCCCACGCTTCCTGTCAAGGATTCCTaGGGCCAGAGCCTGAAAAGTGCTCTAGCCACTCTTCTCTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRLGSNPTLPVKDS*GQSLKSALATLLYA Trigger: AGCATAGAGAAGAGTGGCTAGAGCACTTTTCAGGCTCTGGCCCCAGGAATCCTTGACAGGAAGCGTGGGGTTGCTGCCCAGCCTCCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS GCA 90 bp | GGAAGTCGCATTCCCTCAAAGGGGCCCGGCTTCAACATATTACACTaGGTGGGAGGCTGGGCAGCAACCCCACGCTTCCTGTCAAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: GSRIPSKGPGFNILH*VGGWAATPRFLSRI Trigger: AATCCTTGACAGGAAGCGTGGGGTTGCTGCCCAGCCTCCCACGCAGTGTAATATGTTGAAGCCGGGCCCCTTTGAGGGAATGCGACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS TCA 90 bp | ACTATCTTCCAAAGTGGCTGTGCCCTTTTGCATTCCCACCAGCAATaGACCAGAGTTCCTGTTGCTCCACATCCTCACCAGCATTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TIFQSGCALLHSHQQ*TRVPVAPHPHQHLV Trigger: CACCAAATGCTGGTGAGGATGTGGAGCAACAGGAACTCTGGTTCATTGCTGGTGGGAATGCAAAAGGGCACAGCCACTTTGGAAGATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS GCA 90 bp | CTGTGCCCTTTTGCATTCCCACCAGCAATGAACCAGAGTTCCTGTTaGTCCACATCCTCACCAGCATTTGGTGTTGTCATGTTCTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LCPFAFPPAMNQSSC*STSSPAFGVVMFWT Trigger: AGTCCAGAACATGACAACACCAAATGCTGGTGAGGATGTGGAGCAACAGGAACTCTGGTTCATTGCTGGTGGGAATGCAAAAGGGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS GCA 90 bp | CAAACCTTTTCTAGTCCTCTGCGATTCTTCTCAGCCATCAGGCACTaGCTACAATACGTAAGAGGCAGCAAAAGATACTCCGCAGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTFSSPLRFFSAIRH*LQYVRGSKRYSAGA Trigger: AGCGCCTGCGGAGTATCTTTTGCTGCCTCTTACGTATTGTAGGCAGTGCCTGATGGCTGAGAAGAATCGCAGAGGACTAGAAAAGGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659306.1 ENST00000659960.1 ENST00000660071.1 |
||
| CDS GCA 90 bp | GAAATTTCATCTCTACAAAACATACAAAAATTCTCTGAGTGTGGTTaGCCGCGCCTAGTAGTCCCAGCTACTCCAGCGGCTGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EISSLQNIQKFSECG*PRLVVPATPAAEAG Trigger: TCCTGCCTCAGCCGCTGGAGTAGCTGGGACTACTAGGCGCGGGCAACCACACTCAGAGAATTTTTGTATGTTTTGTAGAGATGAAATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000523452.5 ENST00000663778.1 |
||
| CDS TCA 90 bp | AAGCTGGAGCAGGATGACCAGTTAGGAAGATGTTTAGTATCCAGATaGAGGAGGGTGAGGCATTGTTCTCGAATGGTGGCCATTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KLEQDDQLGRCLVSR*RRVRHCSRMVAIEM Trigger: CATCTCAATGGCCACCATTCGAGAACAATGCCTCACCCTCCTTCATCTGGATACTAAACATCTTCCTAACTGGTCATCCTGCTCCAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CCA 90 bp | TTATTAGCTGATCCACGTTCCATCTACGTATTCAGTGTTGCAGGATaGAGACGTGACAGCGTAGAAAGCGAGCAAAAGCGTTACCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLADPRSIYVFSVAG*RRDSVESEQKRYRA Trigger: TGCACGGTAACGCTTTTGCTCGCTTTCTACGCTGTCACGTCTCCATCCTGCAACACTGAATACGTAGATGGAACGTGGATCAGCTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000518790.2 ENST00000668151.1 |
||
| CDS GCA 90 bp | ACAGCCAAATTGAAAGGAAGGTACAGAGATTTCCCTTATGGCCTCTaGCGTCATACATGTTCAGGCTCCCAATTACAATATCCCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TAKLKGRYRDFPYGL*RHTCSGSQLQYPPP Trigger: TGGTGGGGGATATTGTAATTGGGAGCCTGAACATGTATGACGGCAGAGGCCATAAGGGAAATCTCTGTACCTTCCTTTCAATTTGGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS TCA 90 bp | GTCCACAATGCCTGCCTGGAACATCTCCCTAAATGTTCCCGTGACTaGCTATTTCAGATCTCTGTTCAAATGTTACTTCTTCAGACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHNACLEHLPKCSRD*LFQISVQMLLLQTG Trigger: GCCTGTCTGAAGAAGTAACATTTGAACAGAGATCTGAAATAGTCAGTCACGGGAACATTTAGGGAGATGTTCCAGGCAGGCATTGTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000522747.6 ENST00000653092.1 ENST00000654348.1 ENST00000656599.1 ENST00000659306.1 ENST00000659960.1 ENST00000660071.1 ENST00000671132.1 |
||
| CDS TCA 90 bp | CTGCTATGTGAAGAATGGATCAAAGGAGTAGAAGCTGGAGCAGGATaGCCAGTTAGGAAGATGTTTAGTATCCAGATGAAGGAGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLCEEWIKGVEAGAG*PVRKMFSIQMKEGE Trigger: CTCACCCTCCTTCATCTGGATACTAAACATCTTCCTAACTGGTCATCCTGCTCCAGCTTCTACTCCTTTGATCCATTCTTCACATAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CCA 90 bp | GCTTCCTTGATCACTCTATTTAAAATACTGGGTGAGCGGCATGCATaGACACTTTCACATACAATCACACAGAAACTCTCTTTCCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASLITLFKILGERHA*TLSHTITQKLSFPF Trigger: AAAGGGGAAAGAGAGTTTCTGTGTGATTGTATGTGAAAGTGTCCATGCATGCCGCTCACCCAGTATTTTAAATAGAGTGATCAAGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000522747.6 ENST00000653092.1 ENST00000654348.1 ENST00000656599.1 ENST00000659306.1 ENST00000659960.1 ENST00000660071.1 ENST00000671132.1 |
||
| CDS TCA 90 bp | GATAAAGATGATAAATGCAGTTTTTATTTTGCTGCAGTTATTAGCTaGTCCACGTTCCATCTACGTATTCAGTGTTGCAGGATGGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: DKDDKCSFYFAAVIS*STFHLRIQCCRMET Trigger: CGTCTCCATCCTGCAACACTGAATACGTAGATGGAACGTGGATCAGCTAATAACTGCAGCAAAATAAAAACTGCATTTATCATCTTTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000518790.2 ENST00000668151.1 |
||
| CDS CCA 90 bp | TCCTGTTGCTCCACATCCTCACCAGCATTTGGTGTTGTCATGTTCTaGACTTTGGCCATTCTAATAGATATGTATCTTGAATTAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCCSTSSPAFGVVMF*TLAILIDMYLELIF Trigger: AAAAATTAATTCAAGATACATATCTATTAGAATGGCCAAAGTCCAGAACATGACAACACCAAATGCTGGTGAGGATGTGGAGCAACAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CAA 72 bp | GCGCCGGGTTACGCGCCGACGTCTGGCTGCCACGACTaGCCGTCTGCGGCGGCGGCGGCGGCGGCGAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: APGYAPTSGCHD*PSAAAAAAASG Trigger: TCCGCTCGCCGCCGCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAACCCGGCGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CAA 90 bp | ACGCACGGAGCGCCGGGTTACGCGCCGACGTCTGGCTGCCACGACTaGCCGTCTGCGGCGGCGGCGGCGGCGGCGAGCGGATCCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: THGAPGYAPTSGCHD*PSAAAAAAASGSRR Trigger: CCTGCGGGATCCGCTCGCCGCCGCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAACCCGGCGCTCCGTGCGT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS GCA 72 bp | CGCCGGGTTACGCGCCGACGTCTGGCTGCCACGACTTaGCGTCTGCGGCGGCGGCGGCGGCGGCGAGCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RRVTRRRLAATT*RLRRRRRRRAD Trigger: ATCCGCTCGCCGCCGCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAACCCGGCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS GCA 72 bp | ACGCACGGAGCGCCGGGTTACGCGCCGACGTCTGGCTaGCACGACTTGCCGTCTGCGGCGGCGGCGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: THGAPGYAPTSG*HDLPSAAAAAA Trigger: CGCCGCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAACCCGGCGCTCCGTGCGT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS GCA 72 bp | TTACGCGCCGACGTCTGGCTGCCACGACTTGCCGTCTaGGGCGGCGGCGGCGGCGGCGAGCGGATCCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRADVWLPRLAV*GGGGGGERIPQ Trigger: CTGCGGGATCCGCTCGCCGCCGCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CCA 72 bp | AGTCACGCACGGAGCGCCGGGTTACGCGCCGACGTCTaGCTGCCACGACTTGCCGTCTGCGGCGGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHARSAGLRADV*LPRLAVCGGGG Trigger: GCCGCCGCCGCCGCAGACGGCAAGTCGTGGCAGCCAGACGTCGGCGCGTAACCCGGCGCTCCGTGCGTGACT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CCA 72 bp | AGGGGTGGGGAACGCGGAGCGCGCGCTGACGTCGCCTaGAGTCACGCACGGAGCGCCGGGTTACGCGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: RGGERGARADVA*SHARSAGLRAD Trigger: GTCGGCGCGTAACCCGGCGCTCCGTGCGTGACTCCAGGCGACGTCAGCGCGCGCTCCGCGTTCCCCACCCCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS TCA 72 bp | AGTTGGGAGGAGGGGTGGGGAACGCGGAGCGCGCGCTaGCGTCGCCTGGAGTCACGCACGGAGCGCCGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SWEEGWGTRSAR*RRLESRTERRV Trigger: AACCCGGCGCTCCGTGCGTGACTCCAGGCGACGTCAGCGCGCGCTCCGCGTTCCCCACCCCTCCTCCCAACT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CAA 72 bp | TCCTCAGACGCGCCCCAAGGCCTGGCCCGCGGAATGTaGACGCGCCAGGAGCCGATAGGGCGCGCTCACGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSDAPQGLARGM*TRQEPIGRAHA Trigger: CGCGTGAGCGCGCCCTATCGGCTCCTGGCGCGTCAACATTCCGCGGGCCAGGCCTTGGGGCGCGTCTGAGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000653092.1 ENST00000654348.1 |
||
| CDS CAA 90 bp | ACATCCCCCTCCTCAGACGCGCCCCAAGGCCTGGCCCGCGGAATGTaGACGCGCCAGGAGCCGATAGGGCGCGCTCACGCGCGAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSPSSDAPQGLARGM*TRQEPIGRAHAREG Trigger: CCCTTCTCGCGCGTGAGCGCGCCCTATCGGCTCCTGGCGCGTCAACATTCCGCGGGCCAGGCCTTGGGGCGCGTCTGAGGAGGGGGATGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000654348.1 |
||
| CDS CCA 72 bp | GAGCGGGAGAAGCAGGGTGTGAGCCGGACTTGCCCATaGGAGGGAGAGCGAGCGAGAGCCGAGCCAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: EREKQGVSRTCP*EGERARAEPAI Trigger: GATGGCTGGCTCGGCTCTCGCTCGCTCTCCCTCCCATGGGCAAGTCCGGCTCACACCCTGCTTCTCCCGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CCA 72 bp | GAAGTCGCAACGACGCACAGGGCCCTAAGTTGGAGCTaGCGCAGGCCCTTCAGGGTTCTATCCCCGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EVATTHRALSWS*RRPFRVLSPPE Trigger: CTCTGGCGGGGATAGAACCCTGAAGGGCCTGCGCCAGCTCCAACTTAGGGCCCTGTGCGTCGTTGCGACTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS TCA 72 bp | TGGAGACCACCAGTGATGCGTTTGCTTAGCAATCCCTaGGCCCCATTTCCCCTGGCCGCCTTCGCCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WRPPVMRLLSNP*APFPLAAFALG Trigger: CCCCAGGGCGAAGGCGGCCAGGGGAAATGGGGCTCAGGGATTGCTAAGCAAACGCATCACTGGTGGTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000521133.1 ENST00000523452.5 ENST00000656599.1 ENST00000659306.1 ENST00000659960.1 ENST00000660071.1 ENST00000663778.1 ENST00000671132.1 ENST00000671248.1 |
||
| CDS CCA 72 bp | GTAGCAGAAGTCGCAACGACGCACAGGGCCCTAAGTTaGAGCTGGCGCAGGCCCTTCAGGGTTCTATCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VAEVATTHRALS*SWRRPFRVLSP Trigger: CGGGGATAGAACCCTGAAGGGCCTGCGCCAGCTCCAACTTAGGGCCCTGTGCGTCGTTGCGACTTCTGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS CAA 72 bp | GGTAGCAGAAGTCGCAACGACGCACAGGGCCCTAAGTaGGAGCTGGCGCAGGCCCTTCAGGGTTCTATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSRSRNDAQGPK*ELAQALQGSIP Trigger: GGGGATAGAACCCTGAAGGGCCTGCGCCAGCTCCAACTTAGGGCCCTGTGCGTCGTTGCGACTTCTGCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS CAA 72 bp | GCCAAGGTGAGACTTTCCCCGGAGATGAAAGGCCTATaGCCTCTTCAGAGACCCGGGCGGAGTTGGGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AKVRLSPEMKGL*PLQRPGRSWGG Trigger: CCCGCCCCAACTCCGCCCGGGTCTCTGAAGAGGCAATAGGCCTTTCATCTCCGGGGAAAGTCTCACCTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS CCA 72 bp | TCGGCCTTCAGAAGCCAAACGAGTAATAGGTCCTTCTaGGGCGCTGTGGGCGGTGGGTGGAGGAAGTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAFRSQTSNRSF*GAVGGGWRKCG Trigger: CCCACACTTCCTCCACCCACCGCCCACAGCGCCCCAGAAGGACCTATTACTCGTTTGGCTTCTGAAGGCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000653092.1 ENST00000654348.1 |
||
| CDS CCA 72 bp | TTCTTCTCAGCCATCAGGCACTGCAGGGCCCTAAGTTaGAGCTGGCGCAGGCCCTTCAGGGTTCTATCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: FFSAIRHCRALS*SWRRPFRVLSP Trigger: CGGGGATAGAACCCTGAAGGGCCTGCGCCAGCTCCAACTTAGGGCCCTGCAGTGCCTGATGGCTGAGAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653092.1 |
||
| CDS GCA 72 bp | ATTCCCTCAAAGGGGCCCGGCTTCAACATATTACACTaGGTGGGAGGCTGGGCAGCAACCCCACGCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IPSKGPGFNILH*VGGWAATPRFL Trigger: CAGGAAGCGTGGGGTTGCTGCCCAGCCTCCCACGCAGTGTAATATGTTGAAGCCGGGCCCCTTTGAGGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS GCA 72 bp | GCCCAAAGATGGGTGGCCCGAACAAGGCATTTTTACTaGCCCACAGCGCTGGGTCAGCTCCACAGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AQRWVARTRHFY*PTALGQLHSSS Trigger: AGAGGAGCTGTGGAGCTGACCCAGCGCTGTGGGGCAGTAAAAATGCCTTGTTCGGGCCACCCATCTTTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671132.1 |
||
| CDS CCA 72 bp | GCGCAGGCCCTTCAGGGTTCTATCCCCGCCAGAGCCTaGCTTCGGCCTTCAGAAGCCAAACGAGTAATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AQALQGSIPARA*LRPSEAKRVIG Trigger: ACCTATTACTCGTTTGGCTTCTGAAGGCCGAAGCCAGGCTCTGGCGGGGATAGAACCCTGAAGGGCCTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000522747.6 ENST00000653092.1 ENST00000654348.1 |
||
| CDS CCA 72 bp | GGGCCCGGCTTCAACATATTACACTGCGTGGGAGGCTaGGCAGCAACCCCACGCTTCCTGTCAAGGATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPGFNILHCVGG*AATPRFLSRIP Trigger: AGGAATCCTTGACAGGAAGCGTGGGGTTGCTGCCCAGCCTCCCACGCAGTGTAATATGTTGAAGCCGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS CCA 72 bp | GCTGACATCGCAGATGAAGCCGGGCCCAAAGATGGGTaGCCCGAACAAGGCATTTTTACTGCCCCACAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ADIADEAGPKDG*PEQGIFTAPQR Trigger: GCGCTGTGGGGCAGTAAAAATGCCTTGTTCGGGCCACCCATCTTTGGGCCCGGCTTCATCTGCGATGTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000671132.1 |
||
| CDS CAA 90 bp | CTGACACTCCCTGCACGGCAACCATTTCTGTCCGGCCAGGCGCTTTaGGACAGCTTTTCGCAGCGGTGTCTAAGCTTGTGTTCGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LTLPARQPFLSGQAL*DSFSQRCLSLCSVS Trigger: GGACACCGAACACAAGCTTAGACACCGCTGCGAAAAGCTGTCCAAAAGCGCCTGGCCGGACAGAAATGGTTGCCGTGCAGGGAGTGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659306.1 ENST00000663778.1 ENST00000671248.1 |
||
| CDS CCA 72 bp | CTGGGCAGCAACCCCACGCTTCCTGTCAAGGATTCCTaGGGCCAGAGCCTGAAAAGTGCTCTAGCCACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGSNPTLPVKDS*GQSLKSALATL Trigger: AAGAGTGGCTAGAGCACTTTTCAGGCTCTGGCCCCAGGAATCCTTGACAGGAAGCGTGGGGTTGCTGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000522747.6 ENST00000654348.1 |
||
| CDS CCA 72 bp | AAGAGGCAGCAAAAGATAAGGGCCCTAAGTTGGAGCTaGCGCAGGCCCTTCAGGGTTCTATCCCCGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KRQQKIRALSWS*RRPFRVLSPPE Trigger: CTCTGGCGGGGATAGAACCCTGAAGGGCCTGCGCCAGCTCCAACTTAGGGCCCTTATCTTTTGCTGCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521563.6 |
||
| CDS GCA 72 bp | AAGGAAAGCAAGGGAGTGGGGATTCAGGTTGATGGCTaGCTGGCATGGGAGGAGTTAGGGCATGGTACGGGT | + |
|
Preference number: 6 (lower is better) Translates to: KESKGVGIQVDG*LAWEELGHGTG Trigger: ACCCGTACCATGCCCTAACTCCTCCCATGCCAGGCAGCCATCAACCTGAATCCCCACTCCCTTGCTTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CAA 72 bp | GCGCTTTTGGACAGCTTTTCGCAGCGGTGTCTAAGCTaGTGTTCGGTGTCCTTGGAAGGGAGGTCCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALLDSFSQRCLS*CSVSLEGRSQS Trigger: GCTCTGGGACCTCCCTTCCAAGGACACCGAACACAAGCTTAGACACCGCTGCGAAAAGCTGTCCAAAAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659306.1 ENST00000663778.1 ENST00000671248.1 |
||
| CDS CAA 72 bp | CCTGCACGGCAACCATTTCTGTCCGGCCAGGCGCTTTaGGACAGCTTTTCGCAGCGGTGTCTAAGCTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PARQPFLSGQAL*DSFSQRCLSLC Trigger: ACACAAGCTTAGACACCGCTGCGAAAAGCTGTCCAAAAGCGCCTGGCCGGACAGAAATGGTTGCCGTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659306.1 ENST00000663778.1 ENST00000671248.1 |
||
| CDS CCA 72 bp | ATACGTAAGAGGCAGCAAAAGATAAGGGCCCTAAGTTaGAGCTGGCGCAGGCCCTTCAGGGTTCTATCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: IRKRQQKIRALS*SWRRPFRVLSP Trigger: CGGGGATAGAACCCTGAAGGGCCTGCGCCAGCTCCAACTTAGGGCCCTTATCTTTTGCTGCCTCTTACGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521563.6 |
||
| CDS TCA 72 bp | AGCAAAAGATACTCCGCAGGCGCTGGAGACCACCAGTaGTGCGTTTGCTTAGCAATCCCTGAGCCCCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKRYSAGAGDHQ*CVCLAIPEPHF Trigger: GAAATGGGGCTCAGGGATTGCTAAGCAAACGCATCACTGGTGGTCTCCAGCGCCTGCGGAGTATCTTTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659306.1 ENST00000659960.1 ENST00000660071.1 |
||
| CDS CAA 72 bp | TTTTCGCAGCGGTGTCTAAGCTTGTGTTCGGTGTCCTaGGAAGGGAGGTCCCAGAGCTTTACAATAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FSQRCLSLCSVS*EGRSQSFTIGW Trigger: CCAGCCTATTGTAAAGCTCTGGGACCTCCCTTCCAAGGACACCGAACACAAGCTTAGACACCGCTGCGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659306.1 ENST00000663778.1 ENST00000671248.1 |
||
| CDS CAA 90 bp | TTGGACAGCTTTTCGCAGCGGTGTCTAAGCTTGTGTTCGGTGTCCTaGGAAGGGAGGTCCCAGAGCTTTACAATAGGCTGGATTTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LDSFSQRCLSLCSVS*EGRSQSFTIGWIWF Trigger: AAACCAAATCCAGCCTATTGTAAAGCTCTGGGACCTCCCTTCCAAGGACACCGAACACAAGCTTAGACACCGCTGCGAAAAGCTGTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659306.1 ENST00000663778.1 ENST00000671248.1 |
||
| CDS TCA 72 bp | TTCCATCTACGTATTCAGTGTTGCAGGATGGAGACGTaGCAGCGTAGAAAGCGAGCAAAAGCGTTACCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FHLRIQCCRMET*QRRKRAKALPC Trigger: GCACGGTAACGCTTTTGCTCGCTTTCTACGCTGTCACGTCTCCATCCTGCAACACTGAATACGTAGATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000518790.2 ENST00000668151.1 |
||
| CDS GCA 72 bp | CCAGATAATTTCAGACTCAAACCTTTTCTAGTCCTCTaGGATTCTTCTCAGCCATCAGGCACTGCAGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PDNFRLKPFLVL*DSSQPSGTAGP Trigger: GGGCCCTGCAGTGCCTGATGGCTGAGAAGAATCGCAGAGGACTAGAAAAGGTTTGAGTCTGAAATTATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653092.1 |
||
| CDS GCA 72 bp | TTTGCATTCCCACCAGCAATGAACCAGAGTTCCTGTTaGTCCACATCCTCACCAGCATTTGGTGTTGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: FAFPPAMNQSSC*STSSPAFGVVM Trigger: CATGACAACACCAAATGCTGGTGAGGATGTGGAGCAACAGGAACTCTGGTTCATTGCTGGTGGGAATGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS GCA 72 bp | TCTAGTCCTCTGCGATTCTTCTCAGCCATCAGGCACTaGCTACAATACGTAAGAGGCAGCAAAAGATACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPLRFFSAIRH*LQYVRGSKRYS Trigger: GGAGTATCTTTTGCTGCCTCTTACGTATTGTAGGCAGTGCCTGATGGCTGAGAAGAATCGCAGAGGACTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659306.1 ENST00000659960.1 ENST00000660071.1 |
||
| CDS CAA 72 bp | TGGCCTGGATTAGCTTCAGAAGGCACTGGTGTCTGGTaGTATGTAAGCAAGCAGAGGAGTTTTAGAGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: WPGLASEGTGVW*YVSKQRSFRAT Trigger: GGTAGCTCTAAAACTCCTCTGCTTGCTTACATACAACCAGACACCAGTGCCTTCTGAAGCTAATCCAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000522747.6 ENST00000653092.1 ENST00000654348.1 ENST00000656599.1 ENST00000659306.1 ENST00000659960.1 ENST00000660071.1 ENST00000671132.1 ENST00000671248.1 |
||
| CDS GCA 72 bp | TCTAGTCCTCTGCGATTCTTCTCAGCCATCAGGCACTaGCTACAATACGTAAGAGGCAGCAAAAGATACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSPLRFFSAIRH*LQYVRGSKRYL Trigger: CAAGTATCTTTTGCTGCCTCTTACGTATTGTAGGCAGTGCCTGATGGCTGAGAAGAATCGCAGAGGACTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499203.7 ENST00000518790.2 ENST00000668151.1 |
||
| CDS GCA 72 bp | TCTAGTCCTCTGCGATTCTTCTCAGCCATCAGGCACTaGCTACAATACGTAAGAGGCAGCAAAAGATACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSPLRFFSAIRH*LQYVRGSKRYL Trigger: AAGGTATCTTTTGCTGCCTCTTACGTATTGTAGGCAGTGCCTGATGGCTGAGAAGAATCGCAGAGGACTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654348.1 |
||
| CDS CAA 90 bp | AGAAGCCAAGTAGAGTTCTCTTCAACAAGGGTCAACAATAAAGTCTaGGAAATCTTCATAAGCTTGATGCTCCGCAGGCGCTGGAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: RSQVEFSSTRVNNKV*EIFISLMLRRRWRP Trigger: TGGTCTCCAGCGCCTGCGGAGCATCAAGCTTATGAAGATTTCCAAGACTTTATTGTTGACCCTTGTTGAAGAGAACTCTACTTGGCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000521133.1 ENST00000523452.5 ENST00000671132.1 ENST00000671248.1 |
||
| CDS CCA 72 bp | TCCTTGGAAGGGAGGTCCCAGAGCTTTACAATAGGCTaGATTTGGTTTGACATCTTTTGGTGGACTGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLEGRSQSFTIG*IWFDIFWWTVK Trigger: TTTGACAGTCCACCAAAAGATGTCAAACCAAATCCAGCCTATTGTAAAGCTCTGGGACCTCCCTTCCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671248.1 |
||
| CDS GCA 72 bp | TTGAAAGGAAGGTACAGAGATTTCCCTTATGGCCTCTaGCGTCATACATGTTCAGGCTCCCAATTACAATAT | + |
|
Preference number: 6 (lower is better) Translates to: LKGRYRDFPYGL*RHTCSGSQLQY Trigger: ATATTGTAATTGGGAGCCTGAACATGTATGACGGCAGAGGCCATAAGGGAAATCTCTGTACCTTCCTTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CAA 90 bp | GACAGCGTAGAAAGCGAGCAAAAGCGTTACCGTGCACCAAAAATCTaGTCAAACTTGATACGATTTCAAGAAGACTGTCTTAAAGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: DSVESEQKRYRAPKI*SNLIRFQEDCLKGH Trigger: ATGTCCTTTAAGACAGTCTTCTTGAAATCGTATCAAGTTTGACAAGATTTTTGGTGCACGGTAACGCTTTTGCTCGCTTTCTACGCTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000499203.7 ENST00000668151.1 |
||
| CDS CAA 90 bp | ATCCCCCACCAGAGCGGTACATACATTACAACAGATAAACCTACATaGATACACCACTATCATCCAAAGTCTATACCTTACATTAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: IPHQSGTYITTDKPT*IHHYHPKSIPYIRV Trigger: AACCCTAATGTAAGGTATAGACTTTGGATGATAGTGGTGTATCAATGTAGGTTTATCTGTTGTAATGTATGTACCGCTCTGGTGGGGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CCA 72 bp | TCCACATCCTCACCAGCATTTGGTGTTGTCATGTTCTaGACTTTGGCCATTCTAATAGATATGTATCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: STSSPAFGVVMF*TLAILIDMYLE Trigger: TTCAAGATACATATCTATTAGAATGGCCAAAGTCCAGAACATGACAACACCAAATGCTGGTGAGGATGTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CCA 72 bp | CATCCAAAGTCTATACCTTACATTAGGGTTCACTCTTaGTGGTGTACATTCTATGGGTTTGGACATACATTC | + |
|
Preference number: 6 (lower is better) Translates to: HPKSIPYIRVHS*WCTFYGFGHTF Trigger: GAATGTATGTCCAAACCCATAGAATGTACACCACCAAGAGTGAACCCTAATGTAAGGTATAGACTTTGGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CAA 72 bp | GAAAGCGAGCAAAAGCGTTACCGTGCACCAAAAATCTaGTCAAACTTGATACGATTTCAAGAAGACTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESEQKRYRAPKI*SNLIRFQEDCL Trigger: AAGACAGTCTTCTTGAAATCGTATCAAGTTTGACAAGATTTTTGGTGCACGGTAACGCTTTTGCTCGCTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000499203.7 ENST00000668151.1 |
||
| CDS CCA 72 bp | CCAAAGTCTATACCTTACATTAGGGTTCACTCTTGGTaGTGTACATTCTATGGGTTTGGACATACATTCATT | + |
|
Preference number: 6 (lower is better) Translates to: PKSIPYIRVHSW*CTFYGFGHTFI Trigger: AATGAATGTATGTCCAAACCCATAGAATGTACACCACCAAGAGTGAACCCTAATGTAAGGTATAGACTTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CAA 72 bp | ATAGACTGGAAACTCTATGACAGCAGACATTTCATTTaGTTCAAGCATCTGGAACAACGTCTGGTAAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: IDWKLYDSRHFI*FKHLEQRLVNR Trigger: TCTGTTTACCAGACGTTGTTCCAGATGCTTGAACAAAATGAAATGTCTGCTGTCATAGAGTTTCCAGTCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000522747.6 ENST00000653092.1 ENST00000654348.1 ENST00000656599.1 ENST00000659306.1 ENST00000659960.1 ENST00000660071.1 ENST00000671132.1 |
||
| CDS CAA 72 bp | CTGGCAACTACTGATCCTTTTACTCTCTCCATAGTTTaGCCTTTTCCAGAATGTGATACAGTTTGGAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: LATTDPFTLSIV*PFPECDTVWNH Trigger: ATGATTCCAAACTGTATCACATTCTGGAAAAGGCAAAACTATGGAGAGAGTAAAAGGATCAGTAGTTGCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CAA 90 bp | CTGTCTTACATAGACTGGAAACTCTATGACAGCAGACATTTCATTTaGTTCAAGCATCTGGAACAACGTCTGGTAAACAGACATTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: LSYIDWKLYDSRHFI*FKHLEQRLVNRHLI Trigger: TATCAAATGTCTGTTTACCAGACGTTGTTCCAGATGCTTGAACAAAATGAAATGTCTGCTGTCATAGAGTTTCCAGTCTATGTAAGACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000499203.7 ENST00000521563.6 ENST00000522747.6 ENST00000653092.1 ENST00000654348.1 ENST00000656599.1 ENST00000659306.1 ENST00000659960.1 ENST00000660071.1 ENST00000671132.1 |
||
| CDS CAA 72 bp | TCCTCACCAGCATTTGGTGTTGTCATGTTCTGGACTTaGGCCATTCTAATAGATATGTATCTTGAATTAATT | + |
|
Preference number: 6 (lower is better) Translates to: SSPAFGVVMFWT*AILIDMYLELI Trigger: AATTAATTCAAGATACATATCTATTAGAATGGCCAAAGTCCAGAACATGACAACACCAAATGCTGGTGAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||
| CDS CAA 72 bp | TCCTCTAATGAAGGCCAACTCAGTTGCTTTCAAGTTTaGGTAATTATAAAAGATGCTATAAACATCCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSNEGQLSCFQV*VIIKDAINIHV Trigger: CACATGGATGTTTATAGCATCTTTTATAATTACCAAAACTTGAAAGCAACTGAGTTGGCCTTCATTAGAGGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663778.1 |
||