RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAK (Homo sapiens)

Ensembl gene IDs: ENSG00000111837

Ensembl transcript IDs: ENST00000313243.6, ENST00000354489.7, ENST00000474039.5, ENST00000536370.6, ENST00000538030.3, ENST00000675026.1, ENST00000676116.1

Found 795 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATaGTGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATA +
Preference number: 1 (lower is better)
Translates to: DISQGQGTCTYSTEQ*CRVSHHRLLPVASI
Trigger: TATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR CCA 90 bp CCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTG +
Preference number: 1 (lower is better)
Translates to: PTGPSDLGNNWLLQV*GFISFPLAIKDTFL
Trigger: CAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR CCA 90 bp TTTAGGGAAGTAACAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACTGGCTCTGGAAGCTTGTGTGTAACA +
Preference number: 1 (lower is better)
Translates to: FREVTAGKLLFSPVE*LEPEGTGSGSLCVT
Trigger: TGTTACACACAAGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGTTACTTCCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR CCA 90 bp GGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTaGCTATCAAGGACACCTTCTTGGGATTCACACCTGGAAGATATC +
Preference number: 1 (lower is better)
Translates to: GITGCSKCGGLFPFH*LSRTPSWDSHLEDI
Trigger: GATATCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR CAA 90 bp GCTGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTaGGCCACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGT +
Preference number: 2 (lower is better)
Translates to: AVGFHTIDSYRWPPY*ATQSVLPCTEGMGC
Trigger: ACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CCA 90 bp CCACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAACGGGTCCCAGTGACTTaGGGAATAACTGGTTGCTCC +
Preference number: 2 (lower is better)
Translates to: PPSLSSHALREWAVHGSQRVPVT*GITGCS
Trigger: GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCG...TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CCA 90 bp CCACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAAGACTTGGGGAATAACTaGTTGCTCCAAGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: PPSLSSHALREWAVHGSQDLGNN*LLQVWG
Trigger: CCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTC...TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR GCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGCACACCTGTAAGCCCTaGACTTTGGGAGGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: LCDITAPAAERTCFRANVHTCKP*TLGGRG
Trigger: GCCTCGGCCTCCCAAAGTGCAGGGCTTACAGGTGTG...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp ACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCCCTGTCGAGTGGTTaGAGCCTGAGGGTACTGGCT +
Preference number: 2 (lower is better)
Translates to: TGCSKCGGLFPFHWLSRTPLSSG*SLRVLA
Trigger: AGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGG...TGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACAATAAGAACCACAGCTaGCAGCCAGCAAAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: PRVKELARTLRSNAVGFHNKNHS*QPAKVG
Trigger: GCCAACCTTTGCTGGCTGTCAGCTGTGGTTCTTATT...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR TCA 90 bp CCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATCTGCATTGCTCCTTTTaGAAGCAAGTTCTGCCCCAA +
Preference number: 2 (lower is better)
Translates to: PSLSSHALREWAVHGSQYLHCSF*KQVLPQ
Trigger: TTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAG...ATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR CAA 90 bp AGGGAAGTAACAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGCTCTGGAAGCTTGTGTGTAACATGT +
Preference number: 2 (lower is better)
Translates to: REVTAGKLLFSPVEW*EPEGTGSGSLCVTC
Trigger: ACATGTTACACACAAGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGTTACTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR TCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGAATAAGAACCACAGCTaGCAGCCAGCAAAGGTTGGC +
Preference number: 2 (lower is better)
Translates to: TFPRVKELARTLRSNAVGNKNHS*QPAKVG
Trigger: GCCAACCTTTGCTGGCTGTCAGCTGTGGTTCTTATT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACACACCTGTAAGCCCTaGACTTTGGGAGGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLHTCKP*TLGGRG
Trigger: GCCTCGGCCTCCCAAAGTGCAGGGCTTACAGGTGTG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCTGTCATTGACAAAATaGCAGCGCAGAGCCTTAGTC +
Preference number: 2 (lower is better)
Translates to: PRVKELARTLRSNAVGFHLSLTK*QRRALV
Trigger: GACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp TGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCATCAAGGACACCTTCTTaGGATTCACACCTGGAAGAT +
Preference number: 2 (lower is better)
Translates to: CRVSHHRLLPVASILGHPSRTPS*DSHLED
Trigger: ATCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGA...TGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR GCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 2 (lower is better)
Translates to: PRVKELARTLRSNAVGFHYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
3UTR-3UTR GCA 90 bp GGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTCCAAGTACCCACTTTTaGATATTTCTTCCAGAACTC +
Preference number: 2 (lower is better)
Translates to: GFHTIDSYRWPPYLATQSPSTHF*IFLPEL
Trigger: GAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGG...AGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR GCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 2 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTGGGGAATAACTGGTTaGTCCAAGTGTGGGGGTTTA +
Preference number: 2 (lower is better)
Translates to: TFPRVKELARTLRSNAVGWGITG*SKCGGL
Trigger: TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCTGTCATTGACAAAATaGCAGCGCAGAGCCTTAGTC +
Preference number: 2 (lower is better)
Translates to: TFPRVKELARTLRSNAVGLSLTK*QRRALV
Trigger: GACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGGTCACCTTGAATTCATaGGAACTGTACTGGTCAAGA +
Preference number: 2 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGVTLNS*ELYWSR
Trigger: TCTTGACCAGTACAGTTCCCATGAATTCAAGGTGAC...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR TCA 90 bp GGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTACCTGGAAGATATCTTaGTTGTTTCAAGTAGTACTG +
Preference number: 2 (lower is better)
Translates to: GFHTIDSYRWPPYLATQSTWKIS*LFQVVL
Trigger: CAGTACTACTTGAAACAATCAAGATATCTTCCAGGT...AGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR TCA 90 bp GTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTCTGCATTGCTCCTTTTaGAAGCAAGTTCTGCCCCAA +
Preference number: 2 (lower is better)
Translates to: VYSEAVALRGAKWILWPALHCSF*KQVLPQ
Trigger: TTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAG...AGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR GCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 2 (lower is better)
Translates to: TFPRVKELARTLRSNAVGYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
3UTR-3UTR GCA 90 bp TCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTGACTGCCCAAGTACCCACTTTTaGATATTTCTTCCAGAACTC +
Preference number: 2 (lower is better)
Translates to: SEAVALRGAKWILWPADCPSTHF*IFLPEL
Trigger: GAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGG...GCAGTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR GCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 2 (lower is better)
Translates to: PRVKELARTLRSNAVGFHIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
3UTR-3UTR GCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGAAAGGTTGGCCCAACTaGTGTACAAAAACAAAAGAC +
Preference number: 2 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGKGWPN*CTKTKD
Trigger: GTCTTTTGTTTTTGTACAGCAGTTGGGCCAACCTTT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACACACCTGTAAGCCCTaGACTTTGGGAGGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEHTCKP*TLGGRG
Trigger: GCCTCGGCCTCCCAAAGTGCAGGGCTTACAGGTGTG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGACAGCCAGCAAAGGTTaGCCCAACTGCTGTACAAAA +
Preference number: 2 (lower is better)
Translates to: LCDITAPAAERTCFRANVTASKG*PNCCTK
Trigger: TTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACT +
Preference number: 2 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGIFSPVE*LEPEGT
Trigger: AGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAA...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCTGAGGTCAGGAGTTTaGGACCAGCCTGAGCCTGAC +
Preference number: 2 (lower is better)
Translates to: QENLDLVTIEVIKPLGLILRSGV*DQPEPD
Trigger: GTCAGGCTCAGGCTGGTCTCAAACTCCTGACCTCAG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR TCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATGTGAAGGTCAGAGCTaGGTCAGTGGTCAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLCEGQS*VSGQQH
Trigger: ATGCTGCTGACCACTGACTCAGCTCTGACCTTCACA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 2 (lower is better)
Translates to: TFPRVKELARTLRSNAVGIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
3UTR-3UTR CCA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGTCAAGGACACCTTCTTaGGATTCACACAGAGTGAGC +
Preference number: 2 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWSRTPS*DSHRVS
Trigger: GCTCACTCTGTGTGAATCCCAAGAAGGTGTCCTTGA...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675026.1
3UTR-3UTR GCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCCAAGTACCCACTTTTaGATATTTCTTCCAGAACTC +
Preference number: 2 (lower is better)
Translates to: TFPRVKELARTLRSNAVGPSTHF*IFLPEL
Trigger: GAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
3UTR-3UTR GCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 2 (lower is better)
Translates to: LCDITAPAAERTCFRANVIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGAAAGGTTGGCCCAACTaGTGTACAAAAACAAAAGAC +
Preference number: 2 (lower is better)
Translates to: TFPRVKELARTLRSNAVGKGWPN*CTKTKD
Trigger: GTCTTTTGTTTTTGTACAGCAGTTGGGCCAACCTTT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp TCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGAGTAACTATGACTCTTaGGTCTCTTTCCCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: SKCGGLFPFHWLSRTPSWSNYDS*VSFPEG
Trigger: GCCTTCAGGGAAAGAGACGCAAGAGTCATAGTTACT...CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675026.1
3UTR-3UTR GCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCCAGAAAACAGAATCTTaGTCCAAGTACACAGCCGGT +
Preference number: 2 (lower is better)
Translates to: VFQVYSEAVALRGAKWILQKTES*SKYTAG
Trigger: ACCGGCTGTGTACTTGGAGCAAGATTCTGTTTTCTG...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675026.1
3UTR-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCATATATCAACACTGTaGGCAATGATGCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGHISTL*AMMLRK
Trigger: TTTTCTTAGCATCATTGCCCACAGTGTTGATATATG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCTGTCATTGACAAAATaGCAGCGCAGAGCCTTAGTC +
Preference number: 2 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWALSLTK*QRRALV
Trigger: GACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTATGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLWLLQV*GFISFP
Trigger: TGGAAAGGAAATAAACCCCCACACTTGGAGCAACCA...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR TCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCGAGTGGTTGGAGCCTaGGGGTACTGGCTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIRVVGA*GYWLWK
Trigger: CTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR TCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCAGAGGTTGGAGCAGTTaGCAATTCGGAATCAGATTT +
Preference number: 2 (lower is better)
Translates to: VFQVYSEAVALRGAKWILRGWSS*QFGIRF
Trigger: AAATCTGATTCCGAATTGTCAACTGCTCCAACCTCT...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR GCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCAGGGTCAAGGAACTTaGACGTACTCTACGGAGCAA +
Preference number: 2 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLQGQGT*TYSTEQ
Trigger: TTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp TCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 2 (lower is better)
Translates to: SKCGGLFPFHWLSRTPSWIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR GCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGCAGCTGAACGCACTTaGTTCAGAGCAAATGTGAAG +
Preference number: 2 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLAAERT*FRANVK
Trigger: CTTCACATTTGCTCTGAAGCAAGTGCGTTCAGCTGC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACTGTCATTGACAAAATaGCAGCGCAGAGCCTTAGTC +
Preference number: 2 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLLSLTK*QRRALV
Trigger: GACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTTACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 2 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 2 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTGTCACCTTGAATTCATaGGAACTGTACTGGTCAAGA +
Preference number: 2 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAVTLNS*ELYWSR
Trigger: TCTTGACCAGTACAGTTCCCATGAATTCAAGGTGAC...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR CAA 90 bp AGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATaGGGCTTGATTGTCACCTTGAATTCATGGGAACTGTACTGGTCA +
Preference number: 2 (lower is better)
Translates to: SQENLDLVTIEVIKP*GLIVTLNSWELYWS
Trigger: TGACCAGTACAGTTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR TCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAAATATATGTACTATGTaGTATCACTGCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLNICTM*YHCPSS
Trigger: GCTGCTGGGGCAGTGATATCACATAGTACATATATT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCACATATATCAACACTGTaGGCAATGATGCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: QVYSEAVALRGAKWILWPHISTL*AMMLRK
Trigger: TTTTCTTAGCATCATTGCCCACAGTGTTGATATATG...TGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGAAGAGAACCTTGACTTaGTTACTATTGAAGTCATCA +
Preference number: 2 (lower is better)
Translates to: LCDITAPAAERTCFRANVKRTLT*LLLKSS
Trigger: TGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR CAA 90 bp TTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTaGAATTCATGGGAACTGTACTGGTCAAGATCAAAACACAAGCCG +
Preference number: 2 (lower is better)
Translates to: LVTIEVIKPLGLIVT*NSWELYWSRSKHKP
Trigger: CGGCTTGTGTTTTGATCTTGACCAGTACAGTTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR CAA 90 bp GAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTaGATTGTCACCTTGAATTCATGGGAACTGTACTGGTCAAGATCA +
Preference number: 2 (lower is better)
Translates to: ENLDLVTIEVIKPLG*IVTLNSWELYWSRS
Trigger: TGATCTTGACCAGTACAGTTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR CAA 90 bp GTTTCCAGAACTTTCTTAATGATGTCCAGCCAAGAGAACCTTGACTaGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACC +
Preference number: 2 (lower is better)
Translates to: VSRTFLMMSSQENLD*VTIEVIKPLGLIVT
Trigger: GGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACATCATTAAGAAAGTTCTGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR TCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCCAACCACAGCAAAGTaGAGAACTACTAAACCATTT +
Preference number: 2 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAPTTAK*RTTKPF
Trigger: AAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 2 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAACAGCCAGCAAAGGTTaGCCCAACTGCTGTACAAAA +
Preference number: 2 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQTASKG*PNCCTK
Trigger: TTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGT...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATCATGGGAACTGTACTaGTCAAGATCAAAACACAAG +
Preference number: 2 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLSWELY*SRSKHK
Trigger: CTTGTGTTTTGATCTTGACCAGTACAGTTCCCATGA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGAAAGGTTGGCCCAACTaGTGTACAAAAACAAAAGAC +
Preference number: 2 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLKGWPN*CTKTKD
Trigger: GTCTTTTGTTTTTGTACAGCAGTTGGGCCAACCTTT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCCAACCACAGCAAAGTaGAGAACTACTAAACCATTT +
Preference number: 2 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIPTTAK*RTTKPF
Trigger: AAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAAAAGGTTGGCCCAACTaGTGTACAAAAACAAAAGAC +
Preference number: 2 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEKGWPN*CTKTKD
Trigger: GTCTTTTGTTTTTGTACAGCAGTTGGGCCAACCTTT...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTCATGGGAACTGTACTaGTCAAGATCAAAACACAAG +
Preference number: 2 (lower is better)
Translates to: QENLDLVTIEVIKPLGLISWELY*SRSKHK
Trigger: CTTGTGTTTTGATCTTGACCAGTACAGTTCCCATGA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAAAGAGAACCTTGACTTaGTTACTATTGAAGTCATCA +
Preference number: 2 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLKRTLT*LLLKSS
Trigger: TGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACCAACCACAGCAAAGTaGAGAACTACTAAACCATTT +
Preference number: 2 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQPTTAK*RTTKPF
Trigger: AAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR GCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACCAAGTACCCACTTTTaGATATTTCTTCCAGAACTC +
Preference number: 2 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQPSTHF*IFLPEL
Trigger: GAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCATATATCAACACTGTaGGCAATGATGCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLHISTL*AMMLRK
Trigger: TTTTCTTAGCATCATTGCCCACAGTGTTGATATATG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCATATATCAACACTGTaGGCAATGATGCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIHISTL*AMMLRK
Trigger: TTTTCTTAGCATCATTGCCCACAGTGTTGATATATG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACATATATCAACACTGTaGGCAATGATGCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQHISTL*AMMLRK
Trigger: TTTTCTTAGCATCATTGCCCACAGTGTTGATATATG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp TTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGC +
Preference number: 3 (lower is better)
Translates to: FHTIDSYRWPPYLATQSVSPVEW*EPEGTG
Trigger: GCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGA...GACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR CAA 90 bp TCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCCTACGGGTCCCAGTGACTaGGGGAATAACTGGTTGCTC +
Preference number: 3 (lower is better)
Translates to: SHHRLLPVASILGHPVCPTGPSD*GNNWLL
Trigger: GAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGT...AGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR CCA 72 bp GTGGTCAGCAGCATGAGCTGGCTTGGGGGAACCAGCTaGCACACTTCATCTTTGTGTCTGGTAGGGACACAG +
Preference number: 3 (lower is better)
Translates to: VVSSMSWLGGTS*HTSSLCLVGTQ
Trigger: CTGTGTCCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCATGCTGCTGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR TCA 72 bp ACGCACTTGCTTCAGAGCAAATGTGAAGGTCAGAGCTaGGTCAGTGGTCAGCAGCATGAGCTGGCTTGGGGG +
Preference number: 3 (lower is better)
Translates to: THLLQSKCEGQS*VSGQQHELAWG
Trigger: CCCCCAAGCCAGCTCATGCTGCTGACCACTGACTCAGCTCTGACCTTCACATTTGCTCTGAAGCAAGTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 3 (lower is better)
Translates to: PRVKELARTLRSNAVGFHPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
3UTR-3UTR CAA 90 bp CAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTACCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 3 (lower is better)
Translates to: QRVPVTWGITGCSKCGGLPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp GGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGCCCCCGACCAGTTTTaGTGTTCCAGGTATATTCTG +
Preference number: 3 (lower is better)
Translates to: GFHTIDSYRWPPYLATQSAPDQF*CSRYIL
Trigger: CAGAATATACCTGGAACACAAAAACTGGTCGGGGGC...AGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR CCA 72 bp GTAACAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACTGGCTCTGGAAGCTTG +
Preference number: 3 (lower is better)
Translates to: VTAGKLLFSPVE*LEPEGTGSGSL
Trigger: CAAGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 3 (lower is better)
Translates to: TFPRVKELARTLRSNAVGPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
3UTR-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACGACAGCCAGCAAAGGTaGGCCCAACTGCTGTACAAA +
Preference number: 3 (lower is better)
Translates to: PRVKELARTLRSNAVGFHDSQQR*AQLLYK
Trigger: TTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTC...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp GCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTGACTGCACTTCTTTGGGGAATAACTGGTaGCTCCAAGTGTGGGGGTTT +
Preference number: 3 (lower is better)
Translates to: AVALRGAKWILWPADCTSLGNNW*LQVWGF
Trigger: AAACCCCCACACTTGGAGCAACCAGTTATTCCCCAA...AGAAGTGCAGTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGACGGGTCCCAGTGACTaGGGGAATAACTGGTTGCTC +
Preference number: 3 (lower is better)
Translates to: TFPRVKELARTLRSNAVGTGPSD*GNNWLL
Trigger: GAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATACCTGCATTGCTCCTTTaGAAAGCAAGTTCTGCCCCA +
Preference number: 3 (lower is better)
Translates to: TQSVLPCTEGMGCARFTIPALLL*KASSAP
Trigger: TGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGG...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp TGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCATCTGAAGCCGTTGCATaGAGAGGTGCTAAGTGGATC +
Preference number: 3 (lower is better)
Translates to: CRVSHHRLLPVASILGHPSEAVA*RGAKWI
Trigger: GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA...TGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR GCA 72 bp CAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATaGTGTAGGGTTTCACACCATAGACTCCTACCGGTG +
Preference number: 3 (lower is better)
Translates to: QGQGTCTYSTEQ*CRVSHHRLLPV
Trigger: CACCGGTAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGGAAGTCATCAAGCCATaGGGCTTGATTGTCACCTTG +
Preference number: 3 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGEVIKP*GLIVTL
Trigger: CAAGGTGACAATCAAGCCCAATGGCTTGATGACTTC...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCCTGCATTGCTCCTTTaGAAAGCAAGTTCTGCCCCA +
Preference number: 3 (lower is better)
Translates to: PRVKELARTLRSNAVGFHPALLL*KASSAP
Trigger: TGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCCAGCCAAGAGAACCTaGACTTGGTTACTATTGAAG +
Preference number: 3 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGPAKRT*TWLLLK
Trigger: CTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp CAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAACAGCAGGTAAGCTCTaGTTTTCCCCTGTCGAGTGG +
Preference number: 3 (lower is better)
Translates to: QVYSEAVALRGAKWILWPTAGKL*FSPVEW
Trigger: CCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGT...TGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGATCAAGCCATTGGGCTaGATTGTCACCTTGAATTCA +
Preference number: 3 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGIKPLG*IVTLNS
Trigger: TGAATTCAAGGTGACAATCAAGCCCAATGGCTTGAT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR GCA 72 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTaGTTCAGAGCAAATGTGAAGGTCAGAGCTGAGTCA +
Preference number: 3 (lower is better)
Translates to: LCDITAPAAERT*FRANVKVRAES
Trigger: TGACTCAGCTCTGACCTTCACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR CCA 72 bp CCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCACTGGCTATCAAGGAC +
Preference number: 3 (lower is better)
Translates to: PSDLGNNWLLQV*GFISFPLAIKD
Trigger: GTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 3 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGGCAATCTTTCTGTCATaGACAAAATGGCAGCGCAGA +
Preference number: 3 (lower is better)
Translates to: TFPRVKELARTLRSNAVGAIFLS*TKWQRR
Trigger: TCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGC...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGGGCTTGATTGTCACCTaGAATTCATGGGAACTGTAC +
Preference number: 3 (lower is better)
Translates to: LCDITAPAAERTCFRANVGLIVT*NSWELY
Trigger: GTACAGTTCCCATGAATTCAAGGTGACAATCAAGCC...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCATCAAGGACACCTTCTaGGGATTCACACCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: VFQVYSEAVALRGAKWILIKDTF*GFTPGR
Trigger: TCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGAT...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR CAA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGATCAAGGACACCTTCTaGGGATTCACACAGAGTGAG +
Preference number: 3 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWIKDTF*GFTQSE
Trigger: CTCACTCTGTGTGAATCCCAAGAAGGTGTCCTTGAT...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675026.1
3UTR-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGATATCCTGCTCAAGATaGAAATTACCATCGCTCCCA +
Preference number: 3 (lower is better)
Translates to: LCDITAPAAERTCFRANVISCSR*KLPSLP
Trigger: TGGGAGCGATGGTAATTTCAATCTTGAGCAGGATAT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp GTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTTCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: VYSEAVALRGAKWILWPASKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...AGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAGACAGCCAGCAAAGGTaGGCCCAACTGCTGTACAAA +
Preference number: 3 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEDSQQR*AQLLYK
Trigger: TTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTC...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGAAGTCATCAAGCCATaGGGCTTGATTGTCACCTTG +
Preference number: 3 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLEVIKP*GLIVTL
Trigger: CAAGGTGACAATCAAGCCCAATGGCTTGATGACTTC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTAACTGGCTCTGGAAGCTaGTGTGTAACATGTTTCTAT +
Preference number: 3 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLTGSGS*CVTCFY
Trigger: ATAGAAACATGTTACACACAAGCTTCCAGAGCCAGT...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR-3UTR CAA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTACCAAGATTTCCTGCATaGCTCCTTTTGAAAGCAAGT +
Preference number: 3 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLPRFPA*LLLKAS
Trigger: ACTTGCTTTCAAAAGGAGCAATGCAGGAAATCTTGG...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTATCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLSKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGCAATCTTTCTGTCATaGACAAAATGGCAGCGCAGA +
Preference number: 3 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLAIFLS*TKWQRR
Trigger: TCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 3 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
3UTR-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWASKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTTCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTASKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGACAGCCAGCAAAGGTaGGCCCAACTGCTGTACAAA +
Preference number: 3 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIDSQQR*AQLLYK
Trigger: TTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAGCAATCTTTCTGTCATaGACAAAATGGCAGCGCAGA +
Preference number: 3 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEAIFLS*TKWQRR
Trigger: TCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGC...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLSKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTATATCCTGCTCAAGATaGAAATTACCATCGCTCCCA +
Preference number: 3 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIISCSR*KLPSLP
Trigger: TGGGAGCGATGGTAATTTCAATCTTGAGCAGGATAT...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWESKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQSKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTATATCCTGCTCAAGATaGAAATTACCATCGCTCCCA +
Preference number: 3 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIISCSR*KLPSLP
Trigger: TGGGAGCGATGGTAATTTCAATCTTGAGCAGGATAT...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAAGGGTCGGACAGAGGGTaGTGGCCCTGCAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PPSLSSHALREWAVHGSQGSDRG*WPCSPL
Trigger: CAGCGGGCTGCAGGGCCACCACCCTCTGTCCGACCC...TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CCA 90 bp GGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTTCTGTGGCGGCTGAATaGGCTGCAGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GFHTIDSYRWPPYLATQSSVAAE*AAVAAG
Trigger: GCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGA...AGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATACGAGTGGTTGGAGCCTaGGGGTACTGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TQSVLPCTEGMGCARFTIRVVGA*GYWLWK
Trigger: CTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCG...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCACACCTGTAAGCCCTaGACTTTGGGAGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGHTCKP*TLGGRG
Trigger: GCCTCGGCCTCCCAAAGTGCAGGGCTTACAGGTGTG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCCCCTGTCGAGTGGTTaGAGCCTGAGGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGPLSSG*SLRVLA
Trigger: AGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGGGTGGCCTCCATACTTaGCCACCCAGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGGGLHT*PPSLSS
Trigger: GGAGGACAGACTGGGTGGCCAAGTATGGAGGCCACC...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTGACTGCGGTGGCCTCCATACTTaGCCACCCAGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SEAVALRGAKWILWPADCGGLHT*PPSLSS
Trigger: GGAGGACAGACTGGGTGGCCAAGTATGGAGGCCACC...GCAGTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCAGCATGAGCTGGCTTaGGGGAACCAGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGQHELA*GNQLAH
Trigger: GTGTGCCAGCTGGTTCCCCCAAGCCAGCTCATGCTG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCTGAGGTCAGGAGTTTaGGACCAGCCTGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGLRSGV*DQPEPD
Trigger: GTCAGGCTCAGGCTGGTCTCAAACTCCTGACCTCAG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCACTGCCCCAGCAGCTaGACGCACTTGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHHCPSS*THLLQS
Trigger: GCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AAGCAAGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCTCGTTCGCTCCCTTGTaGAGCTCCGGCGTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KQVLPQRVPVTWGITGCSSFAPL*SSGVLC
Trigger: ACACAAGACGCCGGAGCTTCACAAGGGAGCGAACGA...GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR GCA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATAGCACACTCCCATACGTaGCGTCCCCCAACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TQSVLPCTEGMGCARFTIAHSHT*RPPTVS
Trigger: TGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGC...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp TTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCGCACACTCCCATACGTaGCGTCCCCCAACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: FHTIDSYRWPPYLATQSVAHSHT*RPPTVS
Trigger: TGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGC...GACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCAGGTCGGGCTCCGGCTaGGTCGGACAGAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VFQVYSEAVALRGAKWILRSGSG*VGQRVV
Trigger: CACCACCCTCTGTCCGACCCAGCCGGAGCCCGACCT...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTCTGTGGCGGCTGAATaGGCTGCAGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGSVAAE*AAVAAG
Trigger: GCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCCCCTGTCGAGTGGTTaGAGCCTGAGGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHPLSSG*SLRVLA
Trigger: AGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCAGCATGAGCTGGCTTaGGGGAACCAGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHQHELA*GNQLAH
Trigger: GTGTGCCAGCTGGTTCCCCCAAGCCAGCTCATGCTG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR CAA 72 bp TTTCACACCATAGACTCCTACCGGTGGCCTCCATACTaGGCCACCCAGTCTGTCCTCCCATGCACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: FHTIDSYRWPPY*ATQSVLPCTEG
Trigger: TCCCTCAGTGCATGGGAGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGTTCTCTTCATCCTTTTaGTGGCCACCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGFSSSF*WPPAPR
Trigger: CCGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAA...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR TCA 90 bp TCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCCTTGTGGCGGTTTCTCCTaGCTCTGTTGCTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SHHRLLPVASILGHPVCPCGGFS*LCCFGG
Trigger: ACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACA...AGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp GGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTCTGAAGCCGTTGCATTaGGAGGTGCTAAGTGGATCC +
Preference number: 4 (lower is better)
Translates to: GFHTIDSYRWPPYLATQSLKPLH*EVLSGS
Trigger: GGATCCACTTAGCACCTCTCAATGCAACGGCTTCAG...AGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCTGAGGTCAGGAGTTTaGGACCAGCCTGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHLRSGV*DQPEPD
Trigger: GTCAGGCTCAGGCTGGTCTCAAACTCCTGACCTCAG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTCGTTCGCTCCCTTGTaGAGCTCCGGCGTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHSFAPL*SSGVLC
Trigger: ACACAAGACGCCGGAGCTTCACAAGGGAGCGAACGA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354489.7
ENST00000538030.3
ENST00000676116.1
CDS-3UTR TCA 90 bp GCTGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCTTGCGTCTCTTTCCCTaGAGGCCAGTGTCACAGATC +
Preference number: 4 (lower is better)
Translates to: AVGFHTIDSYRWPPYLATLRLFP*RPVSQI
Trigger: GATCTGTGACACTGGCCTTCAGGGAAAGAGACGCAA...GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR GCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCAGTCTGTCCTCCCATaGACTGAGGGAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGQSVLP*TEGMGC
Trigger: ACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGGCCCTGCAGCCCGCTaGGGATTACCTGTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLGPAAR*GLPVRA
Trigger: GGCGCGGACAGGTAATCCCCAGCGGGCTGCAGGGCC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313243.6
CDS-3UTR CCA 90 bp CCACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAAATAGAGGATGCCAGCTaGTATCCTTCTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PPSLSSHALREWAVHGSQIEDAS*YPSGQS
Trigger: TGACTGGCCAGAAGGATACCAGCTGGCATCCTCTAT...TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp AGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGCGGGTCCCAGTGACTTaGGGAATAACTGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSAPTGPSDLGNNWLLQVRVPVT*GITGCS
Trigger: GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCG...CACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp TGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCACGGGTCCCAGTGACTTaGGGAATAACTGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CRVSHHRLLPVASILGHPRVPVT*GITGCS
Trigger: GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCG...TGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATAATAGACTCCTACCGGTaGCCTCCATACTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: TQSVLPCTEGMGCARFTIIDSYR*PPYLAT
Trigger: GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTAT...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGATAGACTCCTACCGGTaGCCTCCATACTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGIDSYR*PPYLAT
Trigger: GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTAT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCAGCATGAGCTGGCTTaGGGGAACCAGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGQHELA*GNQLAH
Trigger: GTGTGCCAGCTGGTTCCCCCAAGCCAGCTCATGCTG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTTCTCTTCATCCTTTTaGTGGCCACCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHFSSSF*WPPAPR
Trigger: CCGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGGACTTGAAGATAGTCTaGCCCCAACGCCTCCTACCA +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGDLKIV*PQRLLP
Trigger: TGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTC...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCGAGTGGTTGGAGCCTaGGGGTACTGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCRVVGA*GYWLWK
Trigger: CTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGCACTGCCCCAGCAGCTaGACGCACTTGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVHCPSS*THLLQS
Trigger: GCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTG...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCCTGGGAAACTGGTGTGCTaGGAGGGAAATAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: SHHRLLPVASILGHPVCPGKLVC*EGNNSH
Trigger: ATGGCTGTTATTTCCCTCTCAGCACACCAGTTTCCC...AGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR GCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCACACCTGTAAGCCCTaGACTTTGGGAGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCHTCKP*TLGGRG
Trigger: GCCTCGGCCTCCCAAAGTGCAGGGCTTACAGGTGTG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAAGGTCGGGCTCCGGCTaGGTCGGACAGAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLRSGSG*VGQRVV
Trigger: CACCACCCTCTGTCCGACCCAGCCGGAGCCCGACCT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313243.6
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGGGCTGCAGTGGCTGCTaGCTAGTTTTTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGGCSGC*LVFGWG
Trigger: ACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCC...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCTGAATGGGCTGCAGTaGCTGCTGGCTAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGLNGLQ*LLASFW
Trigger: CCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGGACGCTCAGGTTCTGTaGCGGCTGAATGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVDAQVL*RLNGLQ
Trigger: CTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTC...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTGACGCTCAGGTTCTGTaGCGGCTGAATGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VYSEAVALRGAKWILWPADAQVL*RLNGLQ
Trigger: CTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTC...AGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp GACACCTTCTTGGGATTCACACAGAGTGAGCTGACAGATGGTGCAGTCCCATCGTGCTTTGGAGGTTGCTaGACGCTCAGGTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: DTFLGFTQSELTDGAVPSCFGGC*TLRFCG
Trigger: GCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCA...CGATGGGACTGCACCATCTGTCAGCTCACTCTGTGTGAATCCCAAGAAGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CCA 90 bp CCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATCTGACTCTGTTGCTTTaGAGGTTGCTGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSLSSHALREWAVHGSQYLTLLL*RLLDAQ
Trigger: CTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAG...ATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp GGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTCCATGCTTGGCTTCTTaGAATGGGAGGCTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: GFHTIDSYRWPPYLATQSPCLAS*NGRLRN
Trigger: ATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGG...AGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCCCCTGTCGAGTGGTTaGAGCCTGAGGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCPLSSG*SLRVLA
Trigger: AGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp AGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATTTACCCCTGTCGAGTGGTTaGAGCCTGAGGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: SLSSHALREWAVHGSQYLPLSSG*SLRVLA
Trigger: AGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGG...TAAATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGGACTTGGGGAATAACTaGTTGCTCCAAGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGDLGNN*LLQVWG
Trigger: CCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTC...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCGGGTCCCAGTGACTTaGGGAATAACTGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHRVPVT*GITGCS
Trigger: GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGGCTAAGTGGATCCTCTaGCCAGCTGACTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGAKWIL*PADCTS
Trigger: AGAAGTGCAGTCAGCTGGCCAGAGGATCCACTTAGC...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR CCA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATTGAGAGGTGCTAAGTaGATCCTCTGGCCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: TQSVLPCTEGMGCARFTILRGAK*ILWPAD
Trigger: GTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAA...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
3UTR CAA 72 bp ACAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGCTCTGGAAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: TAGKLLFSPVEW*EPEGTGSGSLC
Trigger: ACACAAGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR TCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTCTCTTCATCCTTTTaGTGGCCACCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGFSSSF*WPPAPR
Trigger: CCGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp TCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCCTGGTTGTCCAACAACCTaGTCGATTATATCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SHHRLLPVASILGHPVCPGCPTT*SIISGR
Trigger: TCTGCCGGATATAATCGATCAGGTTGTTGGACAACC...AGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACGACTTGAAGATAGTCTaGCCCCAACGCCTCCTACCA +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHDLKIV*PQRLLP
Trigger: TGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTC...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTACGAGTGGTTGGAGCCTaGGGGTACTGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLRVVGA*GYWLWK
Trigger: CTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCG...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGAATAAGAACCACAGCTaGCAGCCAGCAAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGNKNHS*QPAKVG
Trigger: GCCAACCTTTGCTGGCTGTCAGCTGTGGTTCTTATT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGCTGAGGTCAGGAGTTTaGGACCAGCCTGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVLRSGV*DQPEPD
Trigger: GTCAGGCTCAGGCTGGTCTCAAACTCCTGACCTCAG...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCTGAGGTCAGGAGTTTaGGACCAGCCTGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCLRSGV*DQPEPD
Trigger: GTCAGGCTCAGGCTGGTCTCAAACTCCTGACCTCAG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTGTGAAGGTCAGAGCTaGGTCAGTGGTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHCEGQS*VSGQQH
Trigger: ATGCTGCTGACCACTGACTCAGCTCTGACCTTCACA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCAGTCTGTCCTCCCATaGACTGAGGGAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGQSVLP*TEGMGC
Trigger: ACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR GCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCAGGGTCAAGGAACTTaGACGTACTCTACGGAGCAA +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGQGQGT*TYSTEQ
Trigger: TTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp CAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTGGTTGGAGCCTGAGGGTACTGCAGGGTCAAGGAACTTaGACGTACTCTACGGAGCAA +
Preference number: 4 (lower is better)
Translates to: QQVSSCFPLSSGWSLRVLQGQGT*TYSTEQ
Trigger: TTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTG...CAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR GCA 90 bp AGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGCAGGGTCAAGGAACTTaGACGTACTCTACGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SSAPTGPSDLGNNWLLQVQGQGT*TYSTEQ
Trigger: TTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTG...CACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCTGCTGGCTAGTTTTTaGCTGGGGTTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGLLASF*LGLSNN
Trigger: GTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATACTGCTGGCTAGTTTTTaGCTGGGGTTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: TQSVLPCTEGMGCARFTILLASF*LGLSNN
Trigger: GTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAG...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTACTGACTCTGTTGCTTTaGAGGTTGCTGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: QRVPVTWGITGCSKCGGLLTLLL*RLLDAQ
Trigger: CTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAG...TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHFSPVE*LEPEGT
Trigger: AGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTTGAGAGGTGCTAAGTaGATCCTCTGGCCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHLRGAK*ILWPAD
Trigger: GTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp TCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGGTGGCCTCCATACTTaGCCACCCAGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SKCGGLFPFHWLSRTPSWGGLHT*PPSLSS
Trigger: GGAGGACAGACTGGGTGGCCAAGTATGGAGGCCACC...CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTTCTCTTCATCCTTTTaGTGGCCACCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCFSSSF*WPPAPR
Trigger: CCGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTGGTTGGAGCCTGAGGGTACTGGGTTGTCCAACAACCTaGTCGATTATATCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: QQVSSCFPLSSGWSLRVLGCPTT*SIISGR
Trigger: TCTGCCGGATATAATCGATCAGGTTGTTGGACAACC...CAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR TCA 90 bp CCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATCTCCTACCACTTTTATaGCTCAGTGTGCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: PSLSSHALREWAVHGSQYLLPLL*LSVPFG
Trigger: GCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAG...ATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGGACTTGAAGATAGTCTaGCCCCAACGCCTCCTACCA +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGDLKIV*PQRLLP
Trigger: TGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTC...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCGAGTGGTTGGAGCCTaGGGGTACTGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWARVVGA*GYWLWK
Trigger: CTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATTTCAATGCCTGGCTTaGTGTCGGTCGTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TQSVLPCTEGMGCARFTIFQCLA*CRSFLW
Trigger: CCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAA...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp CAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATGTTGCTTTGGAGGTTaGTGGACGCTCAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QRVPVTWGITGCSKCGGLCCFGG*WTLRFC
Trigger: ACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACA...TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGTGGGGAATAACTGGTTaGTCCAAGTGTGGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGWGITG*SKCGGL
Trigger: TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCA...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCAGTCTGTCCTCCCATaGACTGAGGGAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCQSVLP*TEGMGC
Trigger: ACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR GCA 90 bp GTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTCAGTCTGTCCTCCCATaGACTGAGGGAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VYSEAVALRGAKWILWPAQSVLP*TEGMGC
Trigger: ACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTG...AGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp TTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCCCCCCAACTGTCTCATaGTTGTGTATCGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: FHTIDSYRWPPYLATQSVPPTVS*LCIGSS
Trigger: AGATGAACCGATACACAACCATGAGACAGTTGGGGG...GACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACATAGAGGATGCCAGCTaGTATCCTTCTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHIEDAS*YPSGQS
Trigger: TGACTGGCCAGAAGGATACCAGCTGGCATCCTCTAT...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGGGGTGTTTCAATGCCTaGCTTGCTGTCGGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGGCFNA*LAVGRF
Trigger: GAAACGACCGACAGCAAGCCAGGCATTGAAACACCC...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATCTGTGGCGGCTGAATaGGCTGCAGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLSVAAE*AAVAAG
Trigger: GCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCTCTGTGGCGGCTGAATaGGCTGCAGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FVFQVYSEAVALRGAKWISVAAE*AAVAAG
Trigger: GCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGA...GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTGACGCTCAGGTTCTGTaGCGGCTGAATGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWADAQVL*RLNGLQ
Trigger: CTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTC...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTTGCTTTGGAGGTTGCTaGACGCTCAGGTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VYSEAVALRGAKWILWPACFGGC*TLRFCG
Trigger: GCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCA...AGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGFSPVE*LEPEGT
Trigger: AGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp GCTGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCTGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: AVGFHTIDSYRWPPYLATWLLQV*GFISFP
Trigger: TGGAAAGGAAATAAACCCCCACACTTGGAGCAACCA...GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCATGCACTGAGGGAATaGGCTGTGCACGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGHALRE*AVHGSQ
Trigger: TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp GTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTATAGACTCCTACCGGTaGCCTCCATACTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: VYSEAVALRGAKWILWPAIDSYR*PPYLAT
Trigger: GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTAT...AGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCAGCATGAGCTGGCTTaGGGGAACCAGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAQHELA*GNQLAH
Trigger: GTGTGCCAGCTGGTTCCCCCAAGCCAGCTCATGCTG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGTATAGAGTTCAGCCATaGTACTTCCAACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGYRVQP*YFQQPT
Trigger: TGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATA...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATTATAGAGTTCAGCCATaGTACTTCCAACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: PSLSSHALREWAVHGSQYYRVQP*YFQQPT
Trigger: TGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATA...ATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCTCCTACCACTTTTATaGCTCAGTGTGCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHLLPLL*LSVPFG
Trigger: GCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp CAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTACTCCTACCACTTTTATaGCTCAGTGTGCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: QRVPVTWGITGCSKCGGLLLPLL*LSVPFG
Trigger: GCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAG...TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGACTTGAAGATAGTCTaGCCCCAACGCCTCCTACCA +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCDLKIV*PQRLLP
Trigger: TGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGGACTTGAAGATAGTCTaGCCCCAACGCCTCCTACCA +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVDLKIV*PQRLLP
Trigger: TGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTC...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATTTAGACTTGAAGATAGTCTaGCCCCAACGCCTCCTACCA +
Preference number: 4 (lower is better)
Translates to: SLSSHALREWAVHGSQYLDLKIV*PQRLLP
Trigger: TGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTC...TAAATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACGAGTGGTTGGAGCCTaGGGGTACTGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLRVVGA*GYWLWK
Trigger: CTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCTGCATTGCTCCTTTTaGAAGCAAGTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHLHCSF*KQVLPQ
Trigger: TTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp CAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTACTGCATTGCTCCTTTTaGAAGCAAGTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: QRVPVTWGITGCSKCGGLLHCSF*KQVLPQ
Trigger: TTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAG...TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp GTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTCTGAAGCCGTTGCATTaGGAGGTGCTAAGTGGATCC +
Preference number: 4 (lower is better)
Translates to: VYSEAVALRGAKWILWPALKPLH*EVLSGS
Trigger: GGATCCACTTAGCACCTCTCAATGCAACGGCTTCAG...AGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp GACACCTTCTTGGGATTCACACAGAGTGAGCTGACAGATGGTGCAGTCCCATCGATTATAAGTACGTCCTaGAAACTGCCCCCGACCAGT +
Preference number: 4 (lower is better)
Translates to: DTFLGFTQSELTDGAVPSIISTS*KLPPTS
Trigger: ACTGGTCGGGGGCAGTTTTCAGGACGTACTTATAAT...CGATGGGACTGCACCATCTGTCAGCTCACTCTGTGTGAATCCCAAGAAGGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTGTGAAGGTCAGAGCTaGGTCAGTGGTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCCEGQS*VSGQQH
Trigger: ATGCTGCTGACCACTGACTCAGCTCTGACCTTCACA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAAGAGGGTGGTGGCCCTaGAGCCCGCTGGGGATTACC +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWERGWWP*SPLGIT
Trigger: GGTAATCCCCAGCGGGCTGCAGGGCCACCACCCTCT...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313243.6
CDS-3UTR GCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGTCCTCACACTGTTGTTaGTACACTGGTGACAGGTTT +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGSSHCC*YTGDRF
Trigger: AAACCTGTCACCAGTGTAGCAACAACAGTGTGAGGA...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR GCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGTACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp CCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATTACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: PSLSSHALREWAVHGSQYYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...ATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACGCAGCTGAACGCACTTaGTTCAGAGCAAATGTGAAG +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHAAERT*FRANVK
Trigger: CTTCACATTTGCTCTGAAGCAAGTGCGTTCAGCTGC...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCTGTTTCTATCTGTCCTaGAACGGCTGCAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: FHTIDSYRWPPYLATQSVCFYLS*NGCSWI
Trigger: AATCCAACTGCAGCCGTTGCAGGACAGATAGAAACA...GACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCCCCCAACTGTCTCATaGTTGTGTATCGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHPPTVS*LCIGSS
Trigger: AGATGAACCGATACACAACCATGAGACAGTTGGGGG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp TCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCCTCAGCCCACACATCAATaGGAGAACTATAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: SHHRLLPVASILGHPVCPQPTHQ*ENYKLK
Trigger: CTTCAGTTTATAGTTCTCCCATTGATGTGTGGGCTG...AGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGGGTGTTTCAATGCCTaGCTTGCTGTCGGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCGCFNA*LAVGRF
Trigger: GAAACGACCGACAGCAAGCCAGGCATTGAAACACCC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGGGGTGTTTCAATGCCTaGCTTGCTGTCGGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVGCFNA*LAVGRF
Trigger: GAAACGACCGACAGCAAGCCAGGCATTGAAACACCC...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTGGCTGCAGTGGCTGCTaGCTAGTTTTTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAGCSGC*LVFGWG
Trigger: ACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCC...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTGGCTGCAGTGGCTGCTaGCTAGTTTTTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGIGCSGC*LVFGWG
Trigger: ACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCC...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGACGCTCAGGTTCTGTaGCGGCTGAATGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLDAQVL*RLNGLQ
Trigger: CTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCGACGCTCAGGTTCTGTaGCGGCTGAATGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FVFQVYSEAVALRGAKWIDAQVL*RLNGLQ
Trigger: CTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTC...GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCCATGCTTGGCTTCTTaGAATGGGAGGCTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGPCLAS*NGRLRN
Trigger: ATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCCCCTGTCGAGTGGTTaGAGCCTGAGGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAPLSSG*SLRVLA
Trigger: AGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVFSPVE*LEPEGT
Trigger: AGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAA...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGACTTGGGGAATAACTaGTTGCTCCAAGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCDLGNN*LLQVWG
Trigger: CCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGACTTGGGGAATAACTaGTTGCTCCAAGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QVYSEAVALRGAKWILWPDLGNN*LLQVWG
Trigger: CCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTC...TGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGGTGGCCTCCATACTTaGCCACCCAGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLGGLHT*PPSLSS
Trigger: GGAGGACAGACTGGGTGGCCAAGTATGGAGGCCACC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCTTGGGGGAACCAGCTaGCACACTTCATCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGLGGTS*HTSSLC
Trigger: ACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTGTCAGCAGCATGAGCTaGCTTGGGGGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAVSSMS*LGGTSW
Trigger: CCAGCTGGTTCCCCCAAGCCAGCTCATGCTGCTGAC...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGTCAGCAGCATGAGCTaGCTTGGGGGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLVSSMS*LGGTSW
Trigger: CCAGCTGGTTCCCCCAAGCCAGCTCATGCTGCTGAC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTCACACATTCTCTTCATCCTTTTaGTGGCCACCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GVYFLSTGYQGHLLGIHTFSSSF*WPPAPR
Trigger: CCGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAA...TGTGTGAATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR TCA 90 bp AGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGATTTCGGTCATGAGCTaGATAGCTTCATTACTGGCA +
Preference number: 4 (lower is better)
Translates to: SSAPTGPSDLGNNWLLQVISVMS*IASLLA
Trigger: TGCCAGTAATGAAGCTATTCAGCTCATGACCGAAAT...CACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp TGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAATTTCGGTCATGAGCTaGATAGCTTCATTACTGGCA +
Preference number: 4 (lower is better)
Translates to: CRVSHHRLLPVASILGHPISVMS*IASLLA
Trigger: TGCCAGTAATGAAGCTATTCAGCTCATGACCGAAAT...TGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGTGTGGCGGTTTCTCCTaGCTCTGTTGCTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWCGGFS*LCCFGG
Trigger: ACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACA...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCTCCTACCACTTTTATaGCTCAGTGTGCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGLLPLL*LSVPFG
Trigger: GCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCGAGTGGTTGGAGCCTaGGGGTACTGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLRVVGA*GYWLWK
Trigger: CTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGAGAGGTTGGAGCAGTTaGCAATTCGGAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGRGWSS*QFGIRF
Trigger: AAATCTGATTCCGAATTGTCAACTGCTCCAACCTCT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCAGTGGTCAGCAGCATaGGCTGGCTTGGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLQWSAA*AGLGEP
Trigger: TGGTTCCCCCAAGCCAGCTCATGCTGCTGACCACTG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGCTTCAGAGCAAATGTaGAGGTCAGAGCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCASEQM*RSELSQ
Trigger: CTGACTCAGCTCTGACCTTCACATTTGCTCTGAAGC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGAATATATGTACTATGTaGTATCACTGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGNICTM*YHCPSS
Trigger: GCTGCTGGGGCAGTGATATCACATAGTACATATATT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTTCGTTCGCTCCCTTGTaGAGCTCCGGCGTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTASFAPL*SSGVLC
Trigger: ACACAAGACGCCGGAGCTTCACAAGGGAGCGAACGA...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354489.7
ENST00000676116.1
CDS-3UTR GCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTCCTCACACTGTTGTTaGTACACTGGTGACAGGTTT +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHSSHCC*YTGDRF
Trigger: AAACCTGTCACCAGTGTAGCAACAACAGTGTGAGGA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGTGTTGCTTTGGAGGTTaGTGGACGCTCAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVCCFGG*WTLRFC
Trigger: ACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACA...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp AGATTTCCTGCATTGCTCCTTTTGAAAGCAAGTTCTGCCCCAACGGGTCCCAGTTGTTGCTTTGGAGGTTaGTGGACGCTCAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RFPALLLLKASSAPTGPSCCFGG*WTLRFC
Trigger: ACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACA...ACTGGGACCCGTTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGGAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp CAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: QRVPVTWGITGCSKCGGLYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATAATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 4 (lower is better)
Translates to: TQSVLPCTEGMGCARFTIIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGGCAGCTGAACGCACTTaGTTCAGAGCAAATGTGAAG +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGAAERT*FRANVK
Trigger: CTTCACATTTGCTCTGAAGCAAGTGCGTTCAGCTGC...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp AGATTTCCTGCATTGCTCCTTTTGAAAGCAAGTTCTGCCCCAACGGGTCCCAGTCTGTCCTGCAACGGCTaGAGTTGGATTCATAACGTG +
Preference number: 4 (lower is better)
Translates to: RFPALLLLKASSAPTGPSLSCNG*SWIHNV
Trigger: CACGTTATGAATCCAACTGCAGCCGTTGCAGGACAG...ACTGGGACCCGTTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGGAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGGGTCGGACAGAGGGTaGTGGCCCTGCAGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIGSDRG*WPCSPL
Trigger: CAGCGGGCTGCAGGGCCACCACCCTCTGTCCGACCC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313243.6
ENST00000675026.1
CDS-3UTR CCA 90 bp CCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATCAGCCCACACATCAATaGGAGAACTATAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: PSLSSHALREWAVHGSQYQPTHQ*ENYKLK
Trigger: CTTCAGTTTATAGTTCTCCCATTGATGTGTGGGCTG...ATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGATAGAGGATGCCAGCTaGTATCCTTCTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVIEDAS*YPSGQS
Trigger: TGACTGGCCAGAAGGATACCAGCTGGCATCCTCTAT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACTGAATGGGCTGCAGTaGCTGCTGGCTAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: TGCSKCGGLFPFHWLSRTLNGLQ*LLASFW
Trigger: CCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAG...TGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTGGTTGGAGCCTGAGGGTACTGGCCATTTGGCTTAGTTaGCATGTTTTTGACGATGCT +
Preference number: 4 (lower is better)
Translates to: QQVSSCFPLSSGWSLRVLAIWLS*HVFDDA
Trigger: AGCATCGTCAAAAACATGCCAACTAAGCCAAATGGC...CAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCCCCTGTCGAGTGGTTaGAGCCTGAGGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLPLSSG*SLRVLA
Trigger: AGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: VFQVYSEAVALRGAKWILFSPVE*LEPEGT
Trigger: AGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAA...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTCAAGGACACCTTCTTaGGATTCACACCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHSRTPS*DSHLED
Trigger: ATCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000676116.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHWLLQV*GFISFP
Trigger: TGGAAAGGAAATAAACCCCCACACTTGGAGCAACCA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCGGGTCCCAGTGACTTaGGGAATAACTGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWARVPVT*GITGCS
Trigger: GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGCTAAGTGGATCCTCTaGCCAGCTGACTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SKCGGLFPFHWLSRTPSWAKWIL*PADCTS
Trigger: AGAAGTGCAGTCAGCTGGCCAGAGGATCCACTTAGC...CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACAGCTAAGTGGATCCTCTaGCCAGCTGACTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: TGCSKCGGLFPFHWLSRTAKWIL*PADCTS
Trigger: AGAAGTGCAGTCAGCTGGCCAGAGGATCCACTTAGC...TGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp TCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGTTGAGAGGTGCTAAGTaGATCCTCTGGCCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SKCGGLFPFHWLSRTPSWLRGAK*ILWPAD
Trigger: GTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAA...CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp AACTGCCCCCGACCAGTTTTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGCATGCACTGAGGGAATaGGCTGTGCACGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: NCPRPVFVFQVYSEAVALHALRE*AVHGSQ
Trigger: TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATG...CAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGTGGCCTCCATACTTaGCCACCCAGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLGGLHT*PPSLSS
Trigger: GGAGGACAGACTGGGTGGCCAAGTATGGAGGCCACC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGACAGCCAGCAAAGGTTaGCCCAACTGCTGTACAAAA +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGTASKG*PNCCTK
Trigger: TTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGCTTGGGGGAACCAGCTaGCACACTTCATCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVLGGTS*HTSSLC
Trigger: ACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAG...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTATAGAGTTCAGCCATaGTACTTCCAACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGYRVQP*YFQQPT
Trigger: TGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACATTTCGGTCATGAGCTaGATAGCTTCATTACTGGCA +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHISVMS*IASLLA
Trigger: TGCCAGTAATGAAGCTATTCAGCTCATGACCGAAAT...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGGTTGTCCAACAACCTaGTCGATTATATCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCGCPTT*SIISGR
Trigger: TCTGCCGGATATAATCGATCAGGTTGTTGGACAACC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCTGCATTGCTCCTTTTaGAAGCAAGTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCLHCSF*KQVLPQ
Trigger: TTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGCTGCATTGCTCCTTTTaGAAGCAAGTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVLHCSF*KQVLPQ
Trigger: TTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAG...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGGAAGGAATATATCCTaGCTGATTGTAAGTAGCATA +
Preference number: 4 (lower is better)
Translates to: GFHTIDSYRWPPYLATQSGRNIS*LIVSSI
Trigger: TATGCTACTTACAATCAGTCAGGATATATTCCTTCC...AGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGATTATAAGTACGTCCTaGAAACTGCCCCCGACCAGT +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVIISTS*KLPPTS
Trigger: ACTGGTCGGGGGCAGTTTTCAGGACGTACTTATAAT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCCAACCACAGCAAAGTaGAGAACTACTAAACCATTT +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGPTTAK*RTTKPF
Trigger: AAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCAGTGGTCAGCAGCATaGGCTGGCTTGGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIQWSAA*AGLGEP
Trigger: TGGTTCCCCCAAGCCAGCTCATGCTGCTGACCACTG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACACTGCCCCAGCAGCTaGACGCACTTGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEHCPSS*THLLQS
Trigger: GCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGAAGTTCATAGAGGATaGCAGCTGGTATCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCEVHRG*QLVSFW
Trigger: CCAGAAGGATACCAGCTGGCATCCTCTATGAACTTC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR GCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGTTTCAATGCCTGGCTTaGTGTCGGTCGTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVFQCLA*CRSFLW
Trigger: CCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAA...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTGGGGAATAACTGGTTaGTCCAAGTGTGGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCWGITG*SKCGGL
Trigger: TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR GCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACAGTCTGTCCTCCCATaGACTGAGGGAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLQSVLP*TEGMGC
Trigger: ACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCAGTCTGTCCTCCCATaGACTGAGGGAATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FVFQVYSEAVALRGAKWIQSVLP*TEGMGC
Trigger: ACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTG...GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCCAAGTACCCACTTTTaGATATTTCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGPSTHF*IFLPEL
Trigger: GAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp GGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTAGTATAATGTCATGCTaGCCTGGAAGATATCTTGAT +
Preference number: 4 (lower is better)
Translates to: GFHTIDSYRWPPYLATQSSIMSC*PGRYLD
Trigger: ATCAAGATATCTTCCAGGGCAGCATGACATTATACT...AGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CCA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTGGGTGTTTCAATGCCTaGCTTGCTGTCGGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGIGCFNA*LAVGRF
Trigger: GAAACGACCGACAGCAAGCCAGGCATTGAAACACCC...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTACTGCTGGCTAGTTTTTaGCTGGGGTTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLLLASF*LGLSNN
Trigger: GTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAG...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATGCTTTGGAGGTTGCTaGACGCTCAGGTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLCFGGC*TLRFCG
Trigger: GCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACCCCTGTCGAGTGGTTaGAGCCTGAGGGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEPLSSG*SLRVLA
Trigger: AGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTCAAGGACACCTTCTTaGGATTCACACCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGSRTPS*DSHLED
Trigger: ATCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACGGGTCCCAGTGACTTaGGGAATAACTGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLRVPVT*GITGCS
Trigger: GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTTGAGAGGTGCTAAGTaGATCCTCTGGCCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWALRGAK*ILWPAD
Trigger: GTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCATGCACTGAGGGAATaGGCTGTGCACGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAHALRE*AVHGSQ
Trigger: TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGGTGGCCTCCATACTTaGCCACCCAGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIGGLHT*PPSLSS
Trigger: GGAGGACAGACTGGGTGGCCAAGTATGGAGGCCACC...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTACAGCCAGCAAAGGTTaGCCCAACTGCTGTACAAAA +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCTASKG*PNCCTK
Trigger: TTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGT...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATTTATGCAACGGCTGCAGTTaGATTCATAACGTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SLSSHALREWAVHGSQYLCNGCS*IHNVGN
Trigger: GTTTCCCACGTTATGAATCCAACTGCAGCCGTTGCA...TAAATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
3UTR CAA 72 bp AGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTaGTGTCTGGTAGGGACACAGAAACAAAACAATTTG +
Preference number: 4 (lower is better)
Translates to: SWLGGTSWHTSS*CLVGTQKQNNL
Trigger: CAAATTGTTTTGTTTCTGTGTCCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTATAGAGTTCAGCCATaGTACTTCCAACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCYRVQP*YFQQPT
Trigger: TGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGATTTCGGTCATGAGCTaGATAGCTTCATTACTGGCA +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGISVMS*IASLLA
Trigger: TGCCAGTAATGAAGCTATTCAGCTCATGACCGAAAT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp CAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATGTTTTGATTCCAGATaGTTTGACGAAGGGCCTAAT +
Preference number: 4 (lower is better)
Translates to: QRVPVTWGITGCSKCGGLCFDSR*FDEGPN
Trigger: ATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACA...TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATGTGGCGGTTTCTCCTaGCTCTGTTGCTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLCGGFS*LCCFGG
Trigger: ACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACGAGTGGTTGGAGCCTaGGGGTACTGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQRVVGA*GYWLWK
Trigger: CTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGAGAGGTTGGAGCAGTTaGCAATTCGGAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGRGWSS*QFGIRF
Trigger: AAATCTGATTCCGAATTGTCAACTGCTCCAACCTCT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp GCAAGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAACCTGGAAGATATCTTaGTTGTTTCAAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: ASSAPTGPSDLGNNWLLQTWKIS*LFQVVL
Trigger: CAGTACTACTTGAAACAATCAAGATATCTTCCAGGT...TTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR TCA 90 bp ACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACTGCATTGCTCCTTTTaGAAGCAAGTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: TGCSKCGGLFPFHWLSRTLHCSF*KQVLPQ
Trigger: TTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAG...TGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCATTATAAGTACGTCCTaGAAACTGCCCCCGACCAGT +
Preference number: 4 (lower is better)
Translates to: VFQVYSEAVALRGAKWILIISTS*KLPPTS
Trigger: ACTGGTCGGGGGCAGTTTTCAGGACGTACTTATAAT...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACTGAGGTCAGGAGTTTaGGACCAGCCTGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWELRSGV*DQPEPD
Trigger: GTCAGGCTCAGGCTGGTCTCAAACTCCTGACCTCAG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACAGTGGTCAGCAGCATaGGCTGGCTTGGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQQWSAA*AGLGEP
Trigger: TGGTTCCCCCAAGCCAGCTCATGCTGCTGACCACTG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACACTGCCCCAGCAGCTaGACGCACTTGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQHCPSS*THLLQS
Trigger: GCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGAATATATGTACTATGTaGTATCACTGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGNICTM*YHCPSS
Trigger: GCTGCTGGGGCAGTGATATCACATAGTACATATATT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCGAAGTTCATAGAGGATaGCAGCTGGTATCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VFQVYSEAVALRGAKWILEVHRG*QLVSFW
Trigger: CCAGAAGGATACCAGCTGGCATCCTCTATGAACTTC...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp AACTGCCCCCGACCAGTTTTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGTTTCAATGCCTGGCTTaGTGTCGGTCGTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NCPRPVFVFQVYSEAVALFQCLA*CRSFLW
Trigger: CCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAA...CAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp ACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACATGGGGAATAACTGGTTaGTCCAAGTGTGGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: TGCSKCGGLFPFHWLSRTWGITG*SKCGGL
Trigger: TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCA...TGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGTACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp CAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTACCAAGTACCCACTTTTaGATATTTCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: QRVPVTWGITGCSKCGGLPSTHF*IFLPEL
Trigger: GAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGG...TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTACCCCCAACTGTCTCATaGTTGTGTATCGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLPPTVS*LCIGSS
Trigger: AGATGAACCGATACACAACCATGAGACAGTTGGGGG...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGAATTTTCACAAGCTCTaGACCCATACAAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGNFHKL*THTKQV
Trigger: AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTATAGAGGATGCCAGCTaGTATCCTTCTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGIIEDAS*YPSGQS
Trigger: TGACTGGCCAGAAGGATACCAGCTGGCATCCTCTAT...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp TGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCATTTATAGGAACACACTaGGGAAAACGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: CRVSHHRLLPVASILGHPFIGTH*GKRKFI
Trigger: TATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAA...TGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTGTCGGTCGTTTCTTTaGATCCCAATTCAACATTTC +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHCRSFL*IPIQHF
Trigger: GAAATGTTGAATTGGGATCCAAAGAAACGACCGACA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTGGGTGTTTCAATGCCTaGCTTGCTGTCGGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAGCFNA*LAVGRF
Trigger: GAAACGACCGACAGCAAGCCAGGCATTGAAACACCC...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCGGGTGTTTCAATGCCTaGCTTGCTGTCGGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: FVFQVYSEAVALRGAKWIGCFNA*LAVGRF
Trigger: GAAACGACCGACAGCAAGCCAGGCATTGAAACACCC...GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCTGCTGGCTAGTTTTTaGCTGGGGTTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWALLASF*LGLSNN
Trigger: GTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAGGCTGCAGTGGCTGCTaGCTAGTTTTTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEGCSGC*LVFGWG
Trigger: ACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCC...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGGCTGCAGTGGCTGCTaGCTAGTTTTTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIGCSGC*LVFGWG
Trigger: ACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCC...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCTGAATGGGCTGCAGTaGCTGCTGGCTAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTALNGLQ*LLASFW
Trigger: CCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACTGAATGGGCTGCAGTaGCTGCTGGCTAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLLNGLQ*LLASFW
Trigger: CCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTCACACCTGGACTGAATGGGCTGCAGTaGCTGCTGGCTAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: FISFPLAIKDTFLGFTPGLNGLQ*LLASFW
Trigger: CCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAG...TCCAGGTGTGAATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACTGACTCTGTTGCTTTaGAGGTTGCTGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLLTLLL*RLLDAQ
Trigger: CTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCCATGCTTGGCTTCTTaGAATGGGAGGCTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAPCLAS*NGRLRN
Trigger: ATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTCCATGCTTGGCTTCTTaGAATGGGAGGCTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGIPCLAS*NGRLRN
Trigger: ATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGG...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp TTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: FVFQVYSEAVALRGAKWIFSPVE*LEPEGT
Trigger: AGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAA...GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGTCAAGGACACCTTCTTaGGATTCACACCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVSRTPS*DSHLED
Trigger: ATCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGA...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTCAAGGACACCTTCTTaGGATTCACACCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCSRTPS*DSHLED
Trigger: ATCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTTTGAGAGGTGCTAAGTaGATCCTCTGGCCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTALRGAK*ILWPAD
Trigger: GTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAA...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGATAGACTCCTACCGGTaGCCTCCATACTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLIDSYR*PPYLAT
Trigger: GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTAT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTCATGGGAACTGTACTaGTCAAGATCAAAACACAAG +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHSWELY*SRSKHK
Trigger: CTTGTGTTTTGATCTTGACCAGTACAGTTCCCATGA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTATAGAGTTCAGCCATaGTACTTCCAACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: VFQVYSEAVALRGAKWILYRVQP*YFQQPT
Trigger: TGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATA...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTGGTTGTCCAACAACCTaGTCGATTATATCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAGCPTT*SIISGR
Trigger: TCTGCCGGATATAATCGATCAGGTTGTTGGACAACC...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTGTGGCGGTTTCTCCTaGCTCTGTTGCTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLCGGFS*LCCFGG
Trigger: ACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCTCCTACCACTTTTATaGCTCAGTGTGCCATTTGGC +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWALLPLL*LSVPFG
Trigger: GCCAAATGGCACACTGAGTCATAAAAGTGGTAGGAG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGACTTGAAGATAGTCTaGCCCCAACGCCTCCTACCA +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLDLKIV*PQRLLP
Trigger: TGGTAGGAGGCGTTGGGGTCAGACTATCTTCAAGTC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGAGAGGTTGGAGCAGTTaGCAATTCGGAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVRGWSS*QFGIRF
Trigger: AAATCTGATTCCGAATTGTCAACTGCTCCAACCTCT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCTGGAAGATATCTTaGTTGTTTCAAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHTWKIS*LFQVVL
Trigger: CAGTACTACTTGAAACAATCAAGATATCTTCCAGGT...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000676116.1
CDS-3UTR TCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAAATAAGAACCACAGCTaGCAGCCAGCAAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLNKNHS*QPAKVG
Trigger: GCCAACCTTTGCTGGCTGTCAGCTGTGGTTCTTATT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTGTGAAGGTCAGAGCTaGGTCAGTGGTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLCEGQS*VSGQQH
Trigger: ATGCTGCTGACCACTGACTCAGCTCTGACCTTCACA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTGCTTCAGAGCAAATGTaGAGGTCAGAGCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAASEQM*RSELSQ
Trigger: CTGACTCAGCTCTGACCTTCACATTTGCTCTGAAGC...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAGCACACTCCCATACGTaGCGTCCCCCAACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQAHSHT*RPPTVS
Trigger: TGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGC...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR GCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTGAAGTTCATAGAGGATaGCAGCTGGTATCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAEVHRG*QLVSFW
Trigger: CCAGAAGGATACCAGCTGGCATCCTCTATGAACTTC...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATGTTGCTTTGGAGGTTaGTGGACGCTCAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLCCFGG*WTLRFC
Trigger: ACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGGGGAATAACTGGTTaGTCCAAGTGTGGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAWGITG*SKCGGL
Trigger: TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCAGGGTCAAGGAACTTaGACGTACTCTACGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAQGQGT*TYSTEQ
Trigger: TTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp AACTGCCCCCGACCAGTTTTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGTAACTATGACTCTTaGGTCTCTTTCCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: NCPRPVFVFQVYSEAVALSNYDS*VSFPEG
Trigger: GCCTTCAGGGAAAGAGACGCAAGAGTCATAGTTACT...CAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR GCA 90 bp AACTGCCCCCGACCAGTTTTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGCAGAAAACAGAATCTTaGTCCAAGTACACAGCCGGT +
Preference number: 4 (lower is better)
Translates to: NCPRPVFVFQVYSEAVALQKTES*SKYTAG
Trigger: ACCGGCTGTGTACTTGGAGCAAGATTCTGTTTTCTG...CAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGACAAAGCAAGTTTTCTaGTTTCATGTCCCTATGAAA +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGTKQVF*FHVPMK
Trigger: TTTCATAGGGACATGAAACCAGAAAACTTGCTTTGT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACAATTTTCACAAGCTCTaGACCCATACAAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHNFHKL*THTKQV
Trigger: AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATT...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTTTATAGGAACACACTaGGGAAAACGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: PRVKELARTLRSNAVGFHFIGTH*GKRKFI
Trigger: TATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTTCTGTGGCGGCTGAATaGGCTGCAGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDISVAAE*AAVAAG
Trigger: GCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGA...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTGCTTTGGAGGTTGCTaGACGCTCAGGTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLICFGGC*TLRFCG
Trigger: GCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATGCTTTGGAGGTTGCTaGACGCTCAGGTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWECFGGC*TLRFCG
Trigger: GCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCTGACTCTGTTGCTTTaGAGGTTGCTGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLLTLLL*RLLDAQ
Trigger: CTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACATGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGCSKCGGLFPFHWLSRTWLLQV*GFISFP
Trigger: TGGAAAGGAAATAAACCCCCACACTTGGAGCAACCA...TGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGCTAAGTGGATCCTCTaGCCAGCTGACTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLAKWIL*PADCTS
Trigger: AGAAGTGCAGTCAGCTGGCCAGAGGATCCACTTAGC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCATGCACTGAGGGAATaGGCTGTGCACGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLHALRE*AVHGSQ
Trigger: TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTATAGACTCCTACCGGTaGCCTCCATACTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIIDSYR*PPYLAT
Trigger: GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTAT...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATACATATATCAACACTGTaGGCAATGATGCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TQSVLPCTEGMGCARFTIHISTL*AMMLRK
Trigger: TTTTCTTAGCATCATTGCCCACAGTGTTGATATATG...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp AGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGCATATATCAACACTGTaGGCAATGATGCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSAPTGPSDLGNNWLLQVHISTL*AMMLRK
Trigger: TTTTCTTAGCATCATTGCCCACAGTGTTGATATATG...CACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTACAGCCAGCAAAGGTTaGCCCAACTGCTGTACAAAA +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWATASKG*PNCCTK
Trigger: TTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGT...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTCATGGGAACTGTACTaGTCAAGATCAAAACACAAG +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGSWELY*SRSKHK
Trigger: CTTGTGTTTTGATCTTGACCAGTACAGTTCCCATGA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGTCACCTTGAATTCATaGGAACTGTACTGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCVTLNS*ELYWSR
Trigger: TCTTGACCAGTACAGTTCCCATGAATTCAAGGTGAC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGGTCACCTTGAATTCATaGGAACTGTACTGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVVTLNS*ELYWSR
Trigger: TCTTGACCAGTACAGTTCCCATGAATTCAAGGTGAC...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGAAGAGAACCTTGACTTaGTTACTATTGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGKRTLT*LLLKSS
Trigger: TGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AACTGCCCCCGACCAGTTTTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGCATAACGTGGGAAACTaGTGTGCTGAGAGGGAAATA +
Preference number: 4 (lower is better)
Translates to: NCPRPVFVFQVYSEAVALHNVGN*CAEREI
Trigger: TATTTCCCTCTCAGCACACCAGTTTCCCACGTTATG...CAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCGTTGGATTCATAACGTaGGAAACTGGTGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VFQVYSEAVALRGAKWILVGFIT*ETGVLR
Trigger: TCTCAGCACACCAGTTTCCCACGTTATGAATCCAAC...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR TCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTATAGAGTTCAGCCATaGTACTTCCAACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAYRVQP*YFQQPT
Trigger: TGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATGTGGCGGTTTCTCCTaGCTCTGTTGCTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWECGGFS*LCCFGG
Trigger: ACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTGTGGCGGTTTCTCCTaGCTCTGTTGCTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLICGGFS*LCCFGG
Trigger: ACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGAGAGGTTGGAGCAGTTaGCAATTCGGAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: SKCGGLFPFHWLSRTPSWRGWSS*QFGIRF
Trigger: AAATCTGATTCCGAATTGTCAACTGCTCCAACCTCT...CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTAAGAGGTTGGAGCAGTTaGCAATTCGGAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLRGWSS*QFGIRF
Trigger: AAATCTGATTCCGAATTGTCAACTGCTCCAACCTCT...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAATTATAAGTACGTCCTaGAAACTGCCCCCGACCAGT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLIISTS*KLPPTS
Trigger: ACTGGTCGGGGGCAGTTTTCAGGACGTACTTATAAT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTATTATAAGTACGTCCTaGAAACTGCCCCCGACCAGT +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAIISTS*KLPPTS
Trigger: ACTGGTCGGGGGCAGTTTTCAGGACGTACTTATAAT...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCCAACCACAGCAAAGTaGAGAACTACTAAACCATTT +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCPTTAK*RTTKPF
Trigger: AAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGAATAAGAACCACAGCTaGCAGCCAGCAAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLNKNHS*QPAKVG
Trigger: GCCAACCTTTGCTGGCTGTCAGCTGTGGTTCTTATT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCAGTGGTCAGCAGCATaGGCTGGCTTGGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIQWSAA*AGLGEP
Trigger: TGGTTCCCCCAAGCCAGCTCATGCTGCTGACCACTG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTGTGAAGGTCAGAGCTaGGTCAGTGGTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLICEGQS*VSGQQH
Trigger: ATGCTGCTGACCACTGACTCAGCTCTGACCTTCACA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCACTGCCCCAGCAGCTaGACGCACTTGCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIHCPSS*THLLQS
Trigger: GCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTGAAGTTCATAGAGGATaGCAGCTGGTATCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAEVHRG*QLVSFW
Trigger: CCAGAAGGATACCAGCTGGCATCCTCTATGAACTTC...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATTTCAATGCCTGGCTTaGTGTCGGTCGTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLFQCLA*CRSFLW
Trigger: CCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ACACAGCCGGTTAGTAGTAGCAGGTCAGTAACTATGACTCTTGCGTCTCTTTCCATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 4 (lower is better)
Translates to: TQPVSSSRSVTMTLASLSIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...GGAAAGAGACGCAAGAGTCATAGTTACTGACCTGCTACTACTAACCGGCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR GCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGAAAGGTTGGCCCAACTaGTGTACAAAAACAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVKGWPN*CTKTKD
Trigger: GTCTTTTGTTTTTGTACAGCAGTTGGGCCAACCTTT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAAAGGTTGGCCCAACTaGTGTACAAAAACAAAAGAC +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCKGWPN*CTKTKD
Trigger: GTCTTTTGTTTTTGTACAGCAGTTGGGCCAACCTTT...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCACACCTGTAAGCCCTaGACTTTGGGAGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIHTCKP*TLGGRG
Trigger: GCCTCGGCCTCCCAAAGTGCAGGGCTTACAGGTGTG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTGCAGCTGAACGCACTTaGTTCAGAGCAAATGTGAAG +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAAAERT*FRANVK
Trigger: CTTCACATTTGCTCTGAAGCAAGTGCGTTCAGCTGC...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTGTAGTATAATGTCATaGTGCCCTGGAAGATATCTT +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGCSIMS*CPGRYL
Trigger: AAGATATCTTCCAGGGCAGCATGACATTATACTACA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACCCCCAACTGTCTCATaGTTGTGTATCGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLPPTVS*LCIGSS
Trigger: AGATGAACCGATACACAACCATGAGACAGTTGGGGG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTGTCGGTCGTTTCTTTaGATCCCAATTCAACATTTC +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCCRSFL*IPIQHF
Trigger: GAAATGTTGAATTGGGATCCAAAGAAACGACCGACA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATGCTTTGGAGGTTGCTaGACGCTCAGGTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQCFGGC*TLRFCG
Trigger: GCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCTGACTCTGTTGCTTTaGAGGTTGCTGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLILTLLL*RLLDAQ
Trigger: CTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGCCATTTGGCTTAGTTaGCATGTTTTTGACGATGCT +
Preference number: 4 (lower is better)
Translates to: SKCGGLFPFHWLSRTPSWAIWLS*HVFDDA
Trigger: AGCATCGTCAAAAACATGCCAACTAAGCCAAATGGC...CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTACTCAGTGTGCCATTTaGCTTAGTTGGCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCTQCAI*LSWHVF
Trigger: AAAAACATGCCAACTAAGCCAAATGGCACACTGAGT...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIFSPVE*LEPEGT
Trigger: AGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTTATTTCCTTTCCACTaGCTATCAAGGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCLFPFH*LSRTPS
Trigger: AGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGTTATTTCCTTTCCACTaGCTATCAAGGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVLFPFH*LSRTPS
Trigger: AGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAA...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACATGCACTGAGGGAATaGGCTGTGCACGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEHALRE*AVHGSQ
Trigger: TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGGTGGCCTCCATACTTaGCCACCCAGTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIGGLHT*PPSLSS
Trigger: GGAGGACAGACTGGGTGGCCAAGTATGGAGGCCACC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAACAGCCAGCAAAGGTTaGCCCAACTGCTGTACAAAA +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLTASKG*PNCCTK
Trigger: TTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCTGTCATTGACAAAATaGCAGCGCAGAGCCTTAGTC +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTALSLTK*QRRALV
Trigger: GACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTCATGGGAACTGTACTaGTCAAGATCAAAACACAAG +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCSWELY*SRSKHK
Trigger: CTTGTGTTTTGATCTTGACCAGTACAGTTCCCATGA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGTCAGCAGCATGAGCTaGCTTGGGGGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIVSSMS*LGGTSW
Trigger: CCAGCTGGTTCCCCCAAGCCAGCTCATGCTGCTGAC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATATAGAGTTCAGCCATaGTACTTCCAACAGCCCACA +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLYRVQP*YFQQPT
Trigger: TGTGGGCTGTTGGAAGTATCATGGCTGAACTCTATA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGTTGTCCAACAACCTaGTCGATTATATCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLGCPTT*SIISGR
Trigger: TCTGCCGGATATAATCGATCAGGTTGTTGGACAACC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTACCTGGAAGATATCTTaGTTGTTTCAAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCTWKIS*LFQVVL
Trigger: CAGTACTACTTGAAACAATCAAGATATCTTCCAGGT...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000676116.1
CDS-3UTR TCA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGACCTGGAAGATATCTTaGTTGTTTCAAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: LCDITAPAAERTCFRANVTWKIS*LFQVVL
Trigger: CAGTACTACTTGAAACAATCAAGATATCTTCCAGGT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACTGAAGCCGTTGCATTaGGAGGTGCTAAGTGGATCC +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQLKPLH*EVLSGS
Trigger: GGATCCACTTAGCACCTCTCAATGCAACGGCTTCAG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTAATAAGAACCACAGCTaGCAGCCAGCAAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLINKNHS*QPAKVG
Trigger: GCCAACCTTTGCTGGCTGTCAGCTGTGGTTCTTATT...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATGTGAAGGTCAGAGCTaGGTCAGTGGTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQCEGQS*VSGQQH
Trigger: ATGCTGCTGACCACTGACTCAGCTCTGACCTTCACA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGCTTCAGAGCAAATGTaGAGGTCAGAGCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIASEQM*RSELSQ
Trigger: CTGACTCAGCTCTGACCTTCACATTTGCTCTGAAGC...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTGCCATCTTCACCTGTTaGCGAAATGGAGAATCTTTT +
Preference number: 4 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGIAIFTC*RNGESF
Trigger: AAAAGATTCTCCATTTCGTCAACAGGTGAAGATGGC...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR GCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATCCTCACACTGTTGTTaGTACACTGGTGACAGGTTT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLSSHCC*YTGDRF
Trigger: AAACCTGTCACCAGTGTAGCAACAACAGTGTGAGGA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR GCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGCACACTCCCATACGTaGCGTCCCCCAACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIAHSHT*RPPTVS
Trigger: TGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR GCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTGTTGCTTTGGAGGTTaGTGGACGCTCAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLICCFGG*WTLRFC
Trigger: ACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACAGGGTCAAGGAACTTaGACGTACTCTACGGAGCAA +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEQGQGT*TYSTEQ
Trigger: TTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCCAAGTACCCACTTTTaGATATTTCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWPSTHF*IFLPEL
Trigger: GAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGG...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGACAAAGCAAGTTTTCTaGTTTCATGTCCCTATGAAA +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGTKQVF*FHVPMK
Trigger: TTTCATAGGGACATGAAACCAGAAAACTTGCTTTGT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAATAGAGGATGCCAGCTaGTATCCTTCTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEIEDAS*YPSGQS
Trigger: TGACTGGCCAGAAGGATACCAGCTGGCATCCTCTAT...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTATAGAGGATGCCAGCTaGTATCCTTCTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIIEDAS*YPSGQS
Trigger: TGACTGGCCAGAAGGATACCAGCTGGCATCCTCTAT...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCTGCTGGCTAGTTTTTaGCTGGGGTTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLILLASF*LGLSNN
Trigger: GTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGGCTGCAGTGGCTGCTaGCTAGTTTTTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIGCSGC*LVFGWG
Trigger: ACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACTGAATGGGCTGCAGTaGCTGCTGGCTAGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQLNGLQ*LLASFW
Trigger: CCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AACTGCCCCCGACCAGTTTTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGACTCAGTGTGCCATTTaGCTTAGTTGGCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: NCPRPVFVFQVYSEAVALTQCAI*LSWHVF
Trigger: AAAAACATGCCAACTAAGCCAAATGGCACACTGAGT...CAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCACTCAGTGTGCCATTTaGCTTAGTTGGCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: VFQVYSEAVALRGAKWILTQCAI*LSWHVF
Trigger: AAAAACATGCCAACTAAGCCAAATGGCACACTGAGT...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCCATGCTTGGCTTCTTaGAATGGGAGGCTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIPCLAS*NGRLRN
Trigger: ATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACCATGCTTGGCTTCTTaGAATGGGAGGCTCCGAAAT +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEPCLAS*NGRLRN
Trigger: ATTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATCAAGGACACCTTCTTaGGATTCACACCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLSRTPS*DSHLED
Trigger: ATCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTTATTTCCTTTCCACTaGCTATCAAGGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: VFQVYSEAVALRGAKWILLFPFH*LSRTPS
Trigger: AGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAA...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTATTATTTCCTTTCCACTaGCTATCAAGGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLLFPFH*LSRTPS
Trigger: AGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAA...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTTGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAWLLQV*GFISFP
Trigger: TGGAAAGGAAATAAACCCCCACACTTGGAGCAACCA...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAGACTTGGGGAATAACTaGTTGCTCCAAGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQDLGNN*LLQVWG
Trigger: CCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTC...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACATGCACTGAGGGAATaGGCTGTGCACGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQHALRE*AVHGSQ
Trigger: TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGACAGCCAGCAAAGGTTaGCCCAACTGCTGTACAAAA +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLTASKG*PNCCTK
Trigger: TTTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGAAGAGAACCTTGACTTaGTTACTATTGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: TFPRVKELARTLRSNAVGKRTLT*LLLKSS
Trigger: TGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCTTGGGGGAACCAGCTaGCACACTTCATCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLILGGTS*HTSSLC
Trigger: ACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAATTTCGGTCATGAGCTaGATAGCTTCATTACTGGCA +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLISVMS*IASLLA
Trigger: TGCCAGTAATGAAGCTATTCAGCTCATGACCGAAAT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGTTTTGATTCCAGATaGTTTGACGAAGGGCCTAAT +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWACFDSR*FDEGPN
Trigger: ATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGGTTGTCCAACAACCTaGTCGATTATATCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIGCPTT*SIISGR
Trigger: TCTGCCGGATATAATCGATCAGGTTGTTGGACAACC...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCTGCATTGCTCCTTTTaGAAGCAAGTTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLILHCSF*KQVLPQ
Trigger: TTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCGGAAGGAATATATCCTaGCTGATTGTAAGTAGCATA +
Preference number: 4 (lower is better)
Translates to: VFQVYSEAVALRGAKWILGRNIS*LIVSSI
Trigger: TATGCTACTTACAATCAGTCAGGATATATTCCTTCC...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCCAACCACAGCAAAGTaGAGAACTACTAAACCATTT +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAPTTAK*RTTKPF
Trigger: AAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAGCTTCAGAGCAAATGTaGAGGTCAGAGCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQASEQM*RSELSQ
Trigger: CTGACTCAGCTCTGACCTTCACATTTGCTCTGAAGC...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTCCCTGGAAGATATCTTaGTTGTTTCAAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGIPWKIS*LFQVVL
Trigger: CAGTACTACTTGAAACAATCAAGATATCTTCCAGGG...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR GCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGAAGTTCATAGAGGATaGCAGCTGGTATCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIEVHRG*QLVSFW
Trigger: CCAGAAGGATACCAGCTGGCATCCTCTATGAACTTC...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATTTCAATGCCTGGCTTaGTGTCGGTCGTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEFQCLA*CRSFLW
Trigger: CCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATGGGGAATAACTGGTTaGTCCAAGTGTGGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEWGITG*SKCGGL
Trigger: TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTACTCTACGGAGCAATaGTGTAGGGTTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLYSTEQ*CRVSHH
Trigger: ATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCCAAGTACCCACTTTTaGATATTTCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAPSTHF*IFLPEL
Trigger: GAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAATTATGCTTTCTTCTaGATTGCTCCTTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCNYAFF*IAPFES
Trigger: GCTTTCAAAAGGAGCAATGCAGAAGAAAGCATAATT...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354489.7
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACCCCCAACTGTCTCATaGTTGTGTATCGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEPPTVS*LCIGSS
Trigger: AGATGAACCGATACACAACCATGAGACAGTTGGGGG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCCCCCAACTGTCTCATaGTTGTGTATCGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIPPTVS*LCIGSS
Trigger: AGATGAACCGATACACAACCATGAGACAGTTGGGGG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CCA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTACAAAGCAAGTTTTCTaGTTTCATGTCCCTATGAAA +
Preference number: 4 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCTKQVF*FHVPMK
Trigger: TTTCATAGGGACATGAAACCAGAAAACTTGCTTTGT...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCAGCCCACACATCAATaGGAGAACTATAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAQPTHQ*ENYKLK
Trigger: CTTCAGTTTATAGTTCTCCCATTGATGTGTGGGCTG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTTGTCGGTCGTTTCTTTaGATCCCAATTCAACATTTC +
Preference number: 4 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGICRSFL*IPIQHF
Trigger: GAAATGTTGAATTGGGATCCAAAGAAACGACCGACA...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACTGCTGGCTAGTTTTTaGCTGGGGTTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQLLASF*LGLSNN
Trigger: GTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTGCCATTTGGCTTAGTTaGCATGTTTTTGACGATGCT +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAAIWLS*HVFDDA
Trigger: AGCATCGTCAAAAACATGCCAACTAAGCCAAATGGC...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGCCATTTGGCTTAGTTaGCATGTTTTTGACGATGCT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLAIWLS*HVFDDA
Trigger: AGCATCGTCAAAAACATGCCAACTAAGCCAAATGGC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLWLLQV*GFISFP
Trigger: TGGAAAGGAAATAAACCCCCACACTTGGAGCAACCA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCGGGTCCCAGTGACTTaGGGAATAACTGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIRVPVT*GITGCS
Trigger: GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTATAGACTCCTACCGGTaGCCTCCATACTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIIDSYR*PPYLAT
Trigger: GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTAT...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCTGTCATTGACAAAATaGCAGCGCAGAGCCTTAGTC +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLILSLTK*QRRALV
Trigger: GACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACTGTCATTGACAAAATaGCAGCGCAGAGCCTTAGTC +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWELSLTK*QRRALV
Trigger: GACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGTCACCTTGAATTCATaGGAACTGTACTGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLVTLNS*ELYWSR
Trigger: TCTTGACCAGTACAGTTCCCATGAATTCAAGGTGAC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR CAA 72 bp GACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTaGATTGTCACCTTGAATTCATGGGAACTGTACTGG +
Preference number: 4 (lower is better)
Translates to: DLVTIEVIKPLG*IVTLNSWELYW
Trigger: CCAGTACAGTTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGATTTCGGTCATGAGCTaGATAGCTTCATTACTGGCA +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLISVMS*IASLLA
Trigger: TGCCAGTAATGAAGCTATTCAGCTCATGACCGAAAT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGAGAGGTTGGAGCAGTTaGCAATTCGGAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLRGWSS*QFGIRF
Trigger: AAATCTGATTCCGAATTGTCAACTGCTCCAACCTCT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTACCTGGAAGATATCTTaGTTGTTTCAAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWATWKIS*LFQVVL
Trigger: CAGTACTACTTGAAACAATCAAGATATCTTCCAGGT...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCTGAAGCCGTTGCATTaGGAGGTGCTAAGTGGATCC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDILKPLH*EVLSGS
Trigger: GGATCCACTTAGCACCTCTCAATGCAACGGCTTCAG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000538030.3
ENST00000675026.1
CDS-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATTATAAGTACGTCCTaGAAACTGCCCCCGACCAGT +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQIISTS*KLPPTS
Trigger: ACTGGTCGGGGGCAGTTTTCAGGACGTACTTATAAT...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATTTCAATGCCTGGCTTaGTGTCGGTCGTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQFQCLA*CRSFLW
Trigger: CCAAAGAAACGACCGACAGCAAGCCAGGCATTGAAA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCCAAGTACCCACTTTTaGATATTTCTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAPSTHF*IFLPEL
Trigger: GAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTAAAGGTTGGCCCAACTaGTGTACAAAAACAAAAGAC +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAKGWPN*CTKTKD
Trigger: GTCTTTTGTTTTTGTACAGCAGTTGGGCCAACCTTT...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACAACAAAGCAAGTTTTCTaGTTTCATGTCCCTATGAAA +
Preference number: 4 (lower is better)
Translates to: TGCSKCGGLFPFHWLSRTTKQVF*FHVPMK
Trigger: TTTCATAGGGACATGAAACCAGAAAACTTGCTTTGT...TGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTAATTTTCACAAGCTCTaGACCCATACAAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWANFHKL*THTKQV
Trigger: AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATT...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCAGCCCACACATCAATaGGAGAACTATAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLQPTHQ*ENYKLK
Trigger: CTTCAGTTTATAGTTCTCCCATTGATGTGTGGGCTG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATGTCGGTCGTTTCTTTaGATCCCAATTCAACATTTC +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLCRSFL*IPIQHF
Trigger: GAAATGTTGAATTGGGATCCAAAGAAACGACCGACA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCTGACTCTGTTGCTTTaGAGGTTGCTGGACGCTCAG +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDILTLLL*RLLDAQ
Trigger: CTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGCCATTTGGCTTAGTTaGCATGTTTTTGACGATGCT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLAIWLS*HVFDDA
Trigger: AGCATCGTCAAAAACATGCCAACTAAGCCAAATGGC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAACTCAGTGTGCCATTTaGCTTAGTTGGCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLTQCAI*LSWHVF
Trigger: AAAAACATGCCAACTAAGCCAAATGGCACACTGAGT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATTATTTCCTTTCCACTaGCTATCAAGGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLLFPFH*LSRTPS
Trigger: AGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEWLLQV*GFISFP
Trigger: TGGAAAGGAAATAAACCCCCACACTTGGAGCAACCA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGACTTGGGGAATAACTaGTTGCTCCAAGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIDLGNN*LLQVWG
Trigger: CCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
3UTR CAA 72 bp ACTTTCTTAATGATGTCCAGCCAAGAGAACCTTGACTaGGTTACTATTGAAGTCATCAAGCCATTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TFLMMSSQENLD*VTIEVIKPLGL
Trigger: CAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACATCATTAAGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTGTTTTGATTCCAGATaGTTTGACGAAGGGCCTAAT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLCFDSR*FDEGPN
Trigger: ATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATCCTCACACTGTTGTTaGTACACTGGTGACAGGTTT +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQSSHCC*YTGDRF
Trigger: AAACCTGTCACCAGTGTAGCAACAACAGTGTGAGGA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR GCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCAGGGTCAAGGAACTTaGACGTACTCTACGGAGCAA +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIQGQGT*TYSTEQ
Trigger: TTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTACAAAGCAAGTTTTCTaGTTTCATGTCCCTATGAAA +
Preference number: 4 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGITKQVF*FHVPMK
Trigger: TTTCATAGGGACATGAAACCAGAAAACTTGCTTTGT...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTAATTTTCACAAGCTCTaGACCCATACAAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTANFHKL*THTKQV
Trigger: AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATT...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACAGCCCACACATCAATaGGAGAACTATAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEQPTHQ*ENYKLK
Trigger: CTTCAGTTTATAGTTCTCCCATTGATGTGTGGGCTG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTATAGAGGATGCCAGCTaGTATCCTTCTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIIEDAS*YPSGQS
Trigger: TGACTGGCCAGAAGGATACCAGCTGGCATCCTCTAT...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTTTTATAGGAACACACTaGGGAAAACGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAFIGTH*GKRKFI
Trigger: TATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAA...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCTGCTGGCTAGTTTTTaGCTGGGGTTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDILLASF*LGLSNN
Trigger: GTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAGCCATTTGGCTTAGTTaGCATGTTTTTGACGATGCT +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEAIWLS*HVFDDA
Trigger: AGCATCGTCAAAAACATGCCAACTAAGCCAAATGGC...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATGGTTGCTCCAAGTGTaGGGGTTTATTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQWLLQV*GFISFP
Trigger: TGGAAAGGAAATAAACCCCCACACTTGGAGCAACCA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCATATATCAACACTGTaGGCAATGATGCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAHISTL*AMMLRK
Trigger: TTTTCTTAGCATCATTGCCCACAGTGTTGATATATG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCTTGGGGGAACCAGCTaGCACACTTCATCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDILGGTS*HTSSLC
Trigger: ACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATTTCGGTCATGAGCTaGATAGCTTCATTACTGGCA +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQISVMS*IASLLA
Trigger: TGCCAGTAATGAAGCTATTCAGCTCATGACCGAAAT...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTGTTTTGATTCCAGATaGTTTGACGAAGGGCCTAAT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLICFDSR*FDEGPN
Trigger: ATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATGTTTTGATTCCAGATaGTTTGACGAAGGGCCTAAT +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWECFDSR*FDEGPN
Trigger: ATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGAAGGAATATATCCTaGCTGATTGTAAGTAGCATA +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLGRNIS*LIVSSI
Trigger: TATGCTACTTACAATCAGTCAGGATATATTCCTTCC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR TCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACCAACCACAGCAAAGTaGAGAACTACTAAACCATTT +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEPTTAK*RTTKPF
Trigger: AAATGGTTTAGTAGTTCTTCACTTTGCTGTGGTTGG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAAATATATGTACTATGTaGTATCACTGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQNICTM*YHCPSS
Trigger: GCTGCTGGGGCAGTGATATCACATAGTACATATATT...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR GCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGAAGTTCATAGAGGATaGCAGCTGGTATCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIEVHRG*QLVSFW
Trigger: CCAGAAGGATACCAGCTGGCATCCTCTATGAACTTC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR GCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTTGGGGAATAACTGGTTaGTCCAAGTGTGGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIWGITG*SKCGGL
Trigger: TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCA...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR GCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAGGGGATGATTTTTaGCCTTCCAAGTACCCACTT +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQIGDDF*PSKYPL
Trigger: AAGTGGGTACTTGGAAGGGCAAAAATCATCCCCTAT...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTACAAAGCAAGTTTTCTaGTTTCATGTCCCTATGAAA +
Preference number: 4 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTATKQVF*FHVPMK
Trigger: TTTCATAGGGACATGAAACCAGAAAACTTGCTTTGT...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGAATTTTCACAAGCTCTaGACCCATACAAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLNFHKL*THTKQV
Trigger: AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTTTATAGGAACACACTaGGGAAAACGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLFIGTH*GKRKFI
Trigger: TATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAACTCAGTGTGCCATTTaGCTTAGTTGGCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWETQCAI*LSWHVF
Trigger: AAAAACATGCCAACTAAGCCAAATGGCACACTGAGT...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTACTCAGTGTGCCATTTaGCTTAGTTGGCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLITQCAI*LSWHVF
Trigger: AAAAACATGCCAACTAAGCCAAATGGCACACTGAGT...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCTGTCATTGACAAAATaGCAGCGCAGAGCCTTAGTC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDILSLTK*QRRALV
Trigger: GACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
3UTR CAA 72 bp ATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTaGAATTCATGGGAACTGTACTGGTCAAGATCAAAA +
Preference number: 4 (lower is better)
Translates to: IEVIKPLGLIVT*NSWELYWSRSK
Trigger: TTTTGATCTTGACCAGTACAGTTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAACCTGGAAGATATCTTaGTTGTTTCAAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWETWKIS*LFQVVL
Trigger: CAGTACTACTTGAAACAATCAAGATATCTTCCAGGT...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAGGAAGGAATATATCCTaGCTGATTGTAAGTAGCATA +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEGRNIS*LIVSSI
Trigger: TATGCTACTTACAATCAGTCAGGATATATTCCTTCC...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR TCA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGGAAGGAATATATCCTaGCTGATTGTAAGTAGCATA +
Preference number: 4 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIGRNIS*LIVSSI
Trigger: TATGCTACTTACAATCAGTCAGGATATATTCCTTCC...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR CCA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATTTATAGGAACACACTaGGGAAAACGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEFIGTH*GKRKFI
Trigger: TATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTTCAAGGACACCTTCTTaGGATTCACACCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDISRTPS*DSHLED
Trigger: ATCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGA...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000676116.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATCATGGGAACTGTACTaGTCAAGATCAAAACACAAG +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQSWELY*SRSKHK
Trigger: CTTGTGTTTTGATCTTGACCAGTACAGTTCCCATGA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTAGAGGTTGGAGCAGTTaGCAATTCGGAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIRGWSS*QFGIRF
Trigger: AAATCTGATTCCGAATTGTCAACTGCTCCAACCTCT...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR TCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTAATATATGTACTATGTaGTATCACTGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDINICTM*YHCPSS
Trigger: GCTGCTGGGGCAGTGATATCACATAGTACATATATT...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAAATTTTCACAAGCTCTaGACCCATACAAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQNFHKL*THTKQV
Trigger: AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATT...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATTTATAGGAACACACTaGGGAAAACGGAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQFIGTH*GKRKFI
Trigger: TATGAACTTCCGTTTTCCCCAGTGTGTTCCTATAAA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGTCACCTTGAATTCATaGGAACTGTACTGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIVTLNS*ELYWSR
Trigger: TCTTGACCAGTACAGTTCCCATGAATTCAAGGTGAC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR TCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTTGTTTTGATTCCAGATaGTTTGACGAAGGGCCTAAT +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDICFDSR*FDEGPN
Trigger: ATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACA...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTACTCAGTGTGCCATTTaGCTTAGTTGGCATGTTTTT +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDITQCAI*LSWHVF
Trigger: AAAAACATGCCAACTAAGCCAAATGGCACACTGAGT...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTTTATTTCCTTTCCACTaGCTATCAAGGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDILFPFH*LSRTPS
Trigger: AGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAA...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CCA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAAAGAGAACCTTGACTTaGTTACTATTGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQKRTLT*LLLKSS
Trigger: TGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTT...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CCA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTAATTTTCACAAGCTCTaGACCCATACAAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDINFHKL*THTKQV
Trigger: AACTTGCTTTGTATGGGTCCAGAGCTTGTGAAAATT...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS GCA 90 bp TCCGGGCGGAGATTGGCCCTGGTAGCACAGGGCGCCGAGGGGACATaGCCGGCCAGCCTCGCAGGTCGGGCTCCGGCTGGGTCGGACAGA +
Preference number: 5 (lower is better)
Translates to: SGRRLALVAQGAEGT*PASLAGRAPAGSDR
Trigger: TCTGTCCGACCCAGCCGGAGCCCGACCTGCGAGGCTGGCCGGGCATGTCCCCTCGGCGCCCTGTGCTACCAGGGCCAATCTCCGCCCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313243.6
ENST00000675026.1
CDS-3UTR CAA 90 bp TCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTGACTGCGTCTCCGGGCGGAGATaGGCCCTGGTAGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: SEAVALRGAKWILWPADCVSGRR*ALVAQG
Trigger: GCCCTGTGCTACCAGGGCCAATCTCCGCCCGGAGAC...GCAGTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CAA 90 bp GGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTCGGTGGCCTCCATACTaGGCCACCCAGTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: GFHTIDSYRWPPYLATQSRWPPY*ATQSVL
Trigger: GAGGACAGACTGGGTGGCCAAGTATGGAGGCCACCG...AGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp TCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTGACTGCTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGC +
Preference number: 5 (lower is better)
Translates to: SEAVALRGAKWILWPADCSPVEW*EPEGTG
Trigger: GCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGA...GCAGTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS TCA 90 bp CTCTGTTGCTTTGGAGGTTGCTGGACGCTCAGGTTCTGTGGCGGCTaGATGGGCTGCAGTGGCTGCTGGCTAGTTTTTGGCTGGGGTTGT +
Preference number: 5 (lower is better)
Translates to: LCCFGGCWTLRFCGG*MGCSGCWLVFGWGC
Trigger: ACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CCA 90 bp CTCCTGACTCTGTTGCTTTGGAGGTTGCTGGACGCTCAGGTTCTGTaGCGGCTGAATGGGCTGCAGTGGCTGCTGGCTAGTTTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LLTLLLWRLLDAQVL*RLNGLQWLLASFWL
Trigger: CAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGC +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHSPVEW*EPEGTG
Trigger: GCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCGGTGGCCTCCATACTaGGCCACCCAGTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHRWPPY*ATQSVL
Trigger: GAGGACAGACTGGGTGGCCAAGTATGGAGGCCACCG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CCACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAACCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 5 (lower is better)
Translates to: PPSLSSHALREWAVHGSQPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CCACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATTTCTCCTGACTCTGTaGCTTTGGAGGTTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PPSLSSHALREWAVHGSQFLLTL*LWRLLD
Trigger: GTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAA...TTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATACCCATGCTTGGCTTCTaGGAATGGGAGGCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: TQSVLPCTEGMGCARFTIPMLGF*EWEAPK
Trigger: TTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGG...TATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp GCTGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCACAGCAGGTAAGCTCTaGTTTTCCCCTGTCGAGTGG +
Preference number: 5 (lower is better)
Translates to: AVGFHTIDSYRWPPYLATTAGKL*FSPVEW
Trigger: CCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGT...GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp AAGCAAGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCACGGGTCCCAGTGACTaGGGGAATAACTGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: KQVLPQRVPVTWGITGCSTGPSD*GNNWLL
Trigger: GAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGT...GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGCGGTGGCCTCCATACTaGGCCACCCAGTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVRWPPY*ATQSVL
Trigger: GAGGACAGACTGGGTGGCCAAGTATGGAGGCCACCG...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCGGTGGCCTCCATACTaGGCCACCCAGTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCRWPPY*ATQSVL
Trigger: GAGGACAGACTGGGTGGCCAAGTATGGAGGCCACCG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATCCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 5 (lower is better)
Translates to: PSLSSHALREWAVHGSQYPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...ATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAGTCTCCGGGCGGAGATaGGCCCTGGTAGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLVSGRR*ALVAQG
Trigger: GCCCTGTGCTACCAGGGCCAATCTCCGCCCGGAGAC...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313243.6
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGTTTCTCTTCATCCTTTaGATGGCCACCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGFLFIL*MATSSP
Trigger: CGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAAA...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGTTTCATCGACCTCACTaGTCCCTGGGAAAAGTGGCC +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGFHRPH*SLGKVA
Trigger: GGCCACTTTTCCCAGGGACAAGTGAGGTCGATGAAA...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCCCATGCTTGGCTTCTaGGAATGGGAGGCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHPMLGF*EWEAPK
Trigger: TTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp TCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCCTCCTGCATTGCTCCTTTaGAAAGCAAGTTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: SHHRLLPVASILGHPVCPPALLL*KASSAP
Trigger: TGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGG...AGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGGACAGCCAGCAAAGGTaGGCCCAACTGCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGDSQQR*AQLLYK
Trigger: TTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTC...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTTTCTCTTCATCCTTTaGATGGCCACCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHFLFIL*MATSSP
Trigger: CGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAAA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTTTCATCGACCTCACTaGTCCCTGGGAAAAGTGGCC +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHFHRPH*SLGKVA
Trigger: GGCCACTTTTCCCAGGGACAAGTGAGGTCGATGAAA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCCTGACTCTGTTGCTTaGGAGGTTGCTGGACGCTCA +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGPDSVA*EVAGRS
Trigger: TGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGTTTCTCCTGACTCTGTaGCTTTGGAGGTTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGFLLTL*LWRLLD
Trigger: GTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAA...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTGACTGCTTTCTCCTGACTCTGTaGCTTTGGAGGTTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SEAVALRGAKWILWPADCFLLTL*LWRLLD
Trigger: GTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAA...GCAGTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGC +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWASPVEW*EPEGTG
Trigger: GCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AAGCAAGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCTTGGGGAATAACTGGTaGCTCCAAGTGTGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: KQVLPQRVPVTWGITGCSLGNNW*LQVWGF
Trigger: AAACCCCCACACTTGGAGCAACCAGTTATTCCCCAA...GGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCCTGCATTGCTCCTTTaGAAAGCAAGTTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGPALLL*KASSAP
Trigger: TGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313243.6
ENST00000474039.5
CDS-3UTR CAA 90 bp CCCAGTCTGTCCTCCCATGCACTGAGGGAATGGGCTGTGCACGGTTCACAATATCCTGCATTGCTCCTTTaGAAAGCAAGTTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: PSLSSHALREWAVHGSQYPALLL*KASSAP
Trigger: TGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGG...ATATTGTGAACCGTGCACAGCCCATTCCCTCAGTGCATGGGAGGACAGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp GCAAGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGCCCCCGACCAGTTTTaGTGTTCCAGGTATATTCTG +
Preference number: 5 (lower is better)
Translates to: ASSAPTGPSDLGNNWLLQAPDQF*CSRYIL
Trigger: CAGAATATACCTGGAACACAAAAACTGGTCGGGGGC...TTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTCGGTGGCCTCCATACTaGGCCACCCAGTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGIRWPPY*ATQSVL
Trigger: GAGGACAGACTGGGTGGCCAAGTATGGAGGCCACCG...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS TCA 90 bp ATGTTTTTGACGATGCTCGGGAATAGCGTTTGTGGCGGTTTCTCCTaGCTCTGTTGCTTTGGAGGTTGCTGGACGCTCAGGTTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: MFLTMLGNSVCGGFS*LCCFGGCWTLRFCG
Trigger: GCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGTCAAAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTGGTTGGAGCCTGAGGGTACTGCCAACTGTCTCATGGTaGTGTATCGGTTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: QQVSSCFPLSSGWSLRVLPTVSW*CIGSSW
Trigger: CCAAGATGAACCGATACACAACCATGAGACAGTTGG...CAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCATCGACCTCACTaGTCCCTGGGAAAAGTGGCC +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGFHRPH*SLGKVA
Trigger: GGCCACTTTTCCCAGGGACAAGTGAGGTCGATGAAA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACGTTTCAATGCCTGGCTaGCTGTCGGTCGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHVSMPG*LSVVSL
Trigger: CAAAGAAACGACCGACAGCAAGCCAGGCATTGAAAC...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp GCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTGACTGCACTTCTAGTTTTTGGCTGGGGTaGTCCAACAACCTGATCGAT +
Preference number: 5 (lower is better)
Translates to: AVALRGAKWILWPADCTSSFWLG*SNNLID
Trigger: ATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACT...AGAAGTGCAGTCAGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGCCTGACTCTGTTGCTTaGGAGGTTGCTGGACGCTCA +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVPDSVA*EVAGRS
Trigger: TGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGG...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCCCATGCTTGGCTTCTaGGAATGGGAGGCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCPMLGF*EWEAPK
Trigger: TTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGC +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLSPVEW*EPEGTG
Trigger: GCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGC +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTASPVEW*EPEGTG
Trigger: GCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGA...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGACAGCAGGTAAGCTCTaGTTTTCCCCTGTCGAGTGG +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGTAGKL*FSPVEW
Trigger: CCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp AGTTCTGCCCCAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGATCAAGGACACCTTCTaGGGATTCACACCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: SSAPTGPSDLGNNWLLQVIKDTF*GFTPGR
Trigger: TCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGAT...CACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTGGGGCAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CAA 90 bp CAACGGGTCCCAGTGACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTGGGGAATAACTGGTaGCTCCAAGTGTGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: QRVPVTWGITGCSKCGGLLGNNW*LQVWGF
Trigger: AAACCCCCACACTTGGAGCAACCAGTTATTCCCCAA...TAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGACGGGTCCCAGTGACTaGGGGAATAACTGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVTGPSD*GNNWLL
Trigger: GAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACGGTGGCCTCCATACTaGGCCACCCAGTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLRWPPY*ATQSVL
Trigger: GAGGACAGACTGGGTGGCCAAGTATGGAGGCCACCG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGCCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGGACAGCCAGCAAAGGTaGGCCCAACTGCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGDSQQR*AQLLYK
Trigger: TTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTC...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCACAGAAAACAGAATCTaGCTCCAAGTACACAGCCGG +
Preference number: 5 (lower is better)
Translates to: FHTIDSYRWPPYLATQSVTENRI*LQVHSR
Trigger: CCGGCTGTGTACTTGGAGCAAGATTCTGTTTTCTGT...GACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS CCA 90 bp TTTAGGGAAGTAACAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACTGGCTCTGGAAGCCGAAATGGAGAA +
Preference number: 5 (lower is better)
Translates to: FREVTAGKLLFSPVE*LEPEGTGSGSRNGE
Trigger: TTCTCCATTTCGGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGTTACTTCCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp GACACCTTCTTGGGATTCACACAGAGTGAGCTGACAGATGGTGCAGTCCCATCGCCAACTGTCTCATGGTaGTGTATCGGTTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: DTFLGFTQSELTDGAVPSPTVSW*CIGSSW
Trigger: CCAAGATGAACCGATACACAACCATGAGACAGTTGG...CGATGGGACTGCACCATCTGTCAGCTCACTCTGTGTGAATCCCAAGAAGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTTTCATCGACCTCACTaGTCCCTGGGAAAAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCFHRPH*SLGKVA
Trigger: GGCCACTTTTCCCAGGGACAAGTGAGGTCGATGAAA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACAGTTTTTGGCTGGGGTaGTCCAACAACCTGATCGAT +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHSFWLG*SNNLID
Trigger: ATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACT...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp ACACAGCCGGTTAGTAGTAGCAGGTCAGTAACTATGACTCTTGCGTCTCTTTCCCCTGACTCTGTTGCTTaGGAGGTTGCTGGACGCTCA +
Preference number: 5 (lower is better)
Translates to: TQPVSSSRSVTMTLASLSPDSVA*EVAGRS
Trigger: TGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGG...GGAAAGAGACGCAAGAGTCATAGTTACTGACCTGCTACTACTAACCGGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGC +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLSPVEW*EPEGTG
Trigger: GCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACATCAAGGACACCTTCTaGGGATTCACACCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHIKDTF*GFTPGR
Trigger: TCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGAT...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTGGGGAATAACTGGTaGCTCCAAGTGTGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGLGNNW*LQVWGF
Trigger: AAACCCCCACACTTGGAGCAACCAGTTATTCCCCAA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTAACGGGTCCCAGTGACTaGGGGAATAACTGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLTGPSD*GNNWLL
Trigger: GAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGT...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTCTGAAGCCGTTGCATaGAGAGGTGCTAAGTGGATC +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGSEAVA*RGAKWI
Trigger: GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGGGCTTGATTGTCACCTaGAATTCATGGGAACTGTAC +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGGLIVT*NSWELY
Trigger: GTACAGTTCCCATGAATTCAAGGTGACAATCAAGCC...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GCTGTAGGGTTTCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCAGCCATCTTCACCTGTaGACGAAATGGAGAATCTTT +
Preference number: 5 (lower is better)
Translates to: AVGFHTIDSYRWPPYLATSHLHL*TKWRIF
Trigger: AAAGATTCTCCATTTCGTCAACAGGTGAAGATGGCT...GGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGAAACCCTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS TCA 90 bp TGCAGTGGCTGCTGGCTAGTTTTTGGCTGGGGTTGTCCAACAACCTaGTCGATTATATCCGGCAGAGGCTTAGGCTCTACCTCAACTAAA +
Preference number: 5 (lower is better)
Translates to: CSGCWLVFGWGCPTT*SIISGRGLGSTSTK
Trigger: TTTAGTTGAGGTAGAGCCTAAGCCTCTGCCGGATATAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGTTTCTCTTCATCCTTTaGATGGCCACCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWFLFIL*MATSSP
Trigger: CGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAAA...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTATTTCTCTTCATCCTTTaGATGGCCACCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLFLFIL*MATSSP
Trigger: CGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAAA...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGGTTTCAATGCCTGGCTaGCTGTCGGTCGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVVSMPG*LSVVSL
Trigger: CAAAGAAACGACCGACAGCAAGCCAGGCATTGAAAC...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCCTCAACTAAAGATGGCTTaGATTCTAATGGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SHHRLLPVASILGHPVCPQLKMA*ILMVAA
Trigger: AGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTG...AGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTTTCTCCTGACTCTGTaGCTTTGGAGGTTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCFLLTL*LWRLLD
Trigger: GTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGTTTCTCCTGACTCTGTaGCTTTGGAGGTTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVFLLTL*LWRLLD
Trigger: GTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAA...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTTAGTTGGCATGTTTTaGACGATGCTCGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHLVGMF*TMLGNS
Trigger: GCTATTCCCGAGCATCGTCAAAAACATGCCAACTAA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCCCATGCTTGGCTTCTaGGAATGGGAGGCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAPMLGF*EWEAPK
Trigger: TTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGC +
Preference number: 5 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWESPVEW*EPEGTG
Trigger: GCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGATCAAGGACACCTTCTaGGGATTCACACCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGIKDTF*GFTPGR
Trigger: TCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGAT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGCCCCCGACCAGTTTTaGTGTTCCAGGTATATTCTG +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCAPDQF*CSRYIL
Trigger: CAGAATATACCTGGAACACAAAAACTGGTCGGGGGC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGGCCCCCGACCAGTTTTaGTGTTCCAGGTATATTCTG +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVAPDQF*CSRYIL
Trigger: CAGAATATACCTGGAACACAAAAACTGGTCGGGGGC...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGATATCCTGCTCAAGATaGAAATTACCATCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGISCSR*KLPSLP
Trigger: TGGGAGCGATGGTAATTTCAATCTTGAGCAGGATAT...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTGGCACACTTCATCTTaGTGTCTGGTAGGGACACAG +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCWHTSS*CLVGTQ
Trigger: CTGTGTCCCTACCAGACACAAAGATGAAGTGTGCCA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTTTCTCTTCATCCTTTaGATGGCCACCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAFLFIL*MATSSP
Trigger: CGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAAA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp TATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTCACACCTGGAAGTTTCATCGACCTCACTaGTCCCTGGGAAAAGTGGCC +
Preference number: 5 (lower is better)
Translates to: YFLSTGYQGHLLGIHTWKFHRPH*SLGKVA
Trigger: GGCCACTTTTCCCAGGGACAAGTGAGGTCGATGAAA...CTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CAA 90 bp TCACACCATAGACTCCTACCGGTGGCCTCCATACTTGGCCACCCAGTCTGTCCTGCTTCATTACTGGCATaGGGAATAAGAGTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: SHHRLLPVASILGHPVCPASLLA*GIRVFK
Trigger: CTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGC...AGGACAGACTGGGTGGCCAAGTATGGAGGCCACCGGTAGGAGTCTATGGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGGTTTCAATGCCTGGCTaGCTGTCGGTCGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWVSMPG*LSVVSL
Trigger: CAAAGAAACGACCGACAGCAAGCCAGGCATTGAAAC...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTTGATTCCAGATGATTaGACGAAGGGCCTAATACCT +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHLIPDD*TKGLIP
Trigger: AGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGAGTTTTTGGCTGGGGTaGTCCAACAACCTGATCGAT +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVSFWLG*SNNLID
Trigger: ATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGTTTTTGGCTGGGGTaGTCCAACAACCTGATCGAT +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCSFWLG*SNNLID
Trigger: ATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACT...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp TTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTCACACCTGGACCTGACTCTGTTGCTTaGGAGGTTGCTGGACGCTCA +
Preference number: 5 (lower is better)
Translates to: FISFPLAIKDTFLGFTPGPDSVA*EVAGRS
Trigger: TGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGG...TCCAGGTGTGAATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCCTGACTCTGTTGCTTaGGAGGTTGCTGGACGCTCA +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAPDSVA*EVAGRS
Trigger: TGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTAGTTGGCATGTTTTaGACGATGCTCGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGLVGMF*TMLGNS
Trigger: GCTATTCCCGAGCATCGTCAAAAACATGCCAACTAA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACCCATGCTTGGCTTCTaGGAATGGGAGGCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLPMLGF*EWEAPK
Trigger: TTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTACAGCAGGTAAGCTCTaGTTTTCCCCTGTCGAGTGG +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWATAGKL*FSPVEW
Trigger: CCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGT...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTACGGGTCCCAGTGACTaGGGGAATAACTGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTATGPSD*GNNWLL
Trigger: GAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGT...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGAAGTCATCAAGCCATaGGGCTTGATTGTCACCTTG +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCEVIKP*GLIVTL
Trigger: CAAGGTGACAATCAAGCCCAATGGCTTGATGACTTC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGTTGACTTGGTTACTATaGAAGTCATCAAGCCATTGG +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGLTWLL*KSSSHW
Trigger: CCAATGGCTTGATGACTTCAATAGTAACCAAGTCAA...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGCAAGAGAACCTTGACTaGGTTACTATTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGQENLD*VTIEVI
Trigger: GATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGCCAGCCAAGAGAACCTaGACTTGGTTACTATTGAAG +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGPAKRT*TWLLLK
Trigger: CTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTTCTGCATTGCTCCTTTaGAAAGCAAGTTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCSALLL*KASSAP
Trigger: TGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGA...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354489.7
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AGATTTCCTGCATTGCTCCTTTTGAAAGCAAGTTCTGCCCCAACGGGTCCCAGTATCAAGGACACCTTCTaGGGATTCACACAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: RFPALLLLKASSAPTGPSIKDTF*GFTQSE
Trigger: CTCACTCTGTGTGAATCCCAAGAAGGTGTCCTTGAT...ACTGGGACCCGTTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CAA 90 bp GACACCTTCTTGGGATTCACACAGAGTGAGCTGACAGATGGTGCAGTCCCATCGATGCAGCAGAAGTTGTaGATTGAAATGACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: DTFLGFTQSELTDGAVPSMQQKL*IEMTSL
Trigger: CAAGGAAGTCATTTCAATCAACAACTTCTGCTGCAT...CGATGGGACTGCACCATCTGTCAGCTCACTCTGTGTGAATCCCAAGAAGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATTTCTCTTCATCCTTTaGATGGCCACCAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLFLFIL*MATSSP
Trigger: CGGGGAGCTGGTGGCCATCAAAAGGATGAAGAGAAA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACGTGACCTTAATTCTCTaGCAAGTCCAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHVTLIL*QVQNQQ
Trigger: TTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCAC...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGAGCTGGCTTGGGGGAACCAGCTGGCACACTTCATCTTTGTGTCTGGTAGGGGCTTCATTACTGGCATaGGGAATAAGAGTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: MSWLGGTSWHTSSLCLVGASLLA*GIRVFK
Trigger: CTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGC...CCCTACCAGACACAAAGATGAAGTGTGCCAGCTGGTTCCCCCAAGCCAGCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTGTTTCAATGCCTGGCTaGCTGTCGGTCGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAVSMPG*LSVVSL
Trigger: CAAAGAAACGACCGACAGCAAGCCAGGCATTGAAAC...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACCAACTAAAGATGGCTTaGATTCTAATGGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHQLKMA*ILMVAA
Trigger: AGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTG...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCCTGACTCTGTTGCTTaGGAGGTTGCTGGACGCTCA +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLPDSVA*EVAGRS
Trigger: TGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGTTAGTTGGCATGTTTTaGACGATGCTCGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVLVGMF*TMLGNS
Trigger: GCTATTCCCGAGCATCGTCAAAAACATGCCAACTAA...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAACAGCAGGTAAGCTCTaGTTTTCCCCTGTCGAGTGG +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLTAGKL*FSPVEW
Trigger: CCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTTGGGGAATAACTGGTaGCTCCAAGTGTGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWALGNNW*LQVWGF
Trigger: AAACCCCCACACTTGGAGCAACCAGTTATTCCCCAA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTGCCCCCGACCAGTTTTaGTGTTCCAGGTATATTCTG +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAAPDQF*CSRYIL
Trigger: CAGAATATACCTGGAACACAAAAACTGGTCGGGGGC...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTCACACAGCCCCCGACCAGTTTTaGTGTTCCAGGTATATTCTG +
Preference number: 5 (lower is better)
Translates to: GVYFLSTGYQGHLLGIHTAPDQF*CSRYIL
Trigger: CAGAATATACCTGGAACACAAAAACTGGTCGGGGGC...TGTGTGAATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACTCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHSKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTGCAATCTTTCTGTCATaGACAAAATGGCAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCAIFLS*TKWQRR
Trigger: TCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGC...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGATATCCTGCTCAAGATaGAAATTACCATCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGISCSR*KLPSLP
Trigger: TGGGAGCGATGGTAATTTCAATCTTGAGCAGGATAT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGCCAGCCAAGAGAACCTaGACTTGGTTACTATTGAAG +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVPAKRT*TWLLLK
Trigger: CTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCCAGCCAAGAGAACCTaGACTTGGTTACTATTGAAG +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCPAKRT*TWLLLK
Trigger: CTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACATAATGCAGCAGAAGTaGTTGATTGAAATGACTTCC +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHIMQQK*LIEMTS
Trigger: GGAAGTCATTTCAATCAACAACTTCTGCTGCATTAT...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGGTGACCTTAATTCTCTaGCAAGTCCAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGVTLIL*QVQNQQ
Trigger: TTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCAC...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp CCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACGCTTCATTACTGGCATaGGGAATAAGAGTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: PRVKELARTLRSNAVGFHASLLA*GIRVFK
Trigger: CTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGC...GTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTGTTTCAATGCCTGGCTaGCTGTCGGTCGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAVSMPG*LSVVSL
Trigger: CAAAGAAACGACCGACAGCAAGCCAGGCATTGAAAC...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTAGTTTTTGGCTGGGGTaGTCCAACAACCTGATCGAT +
Preference number: 5 (lower is better)
Translates to: SVGVYFLSTGYQGHLLGISFWLG*SNNLID
Trigger: ATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACT...AATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTTTTCTCCTGACTCTGTaGCTTTGGAGGTTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAFLLTL*LWRLLD
Trigger: GTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAA...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AACTGCCCCCGACCAGTTTTTGTGTTCCAGGTATATTCTGAAGCCGTTGCATTGTTAGTTGGCATGTTTTaGACGATGCTCGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: NCPRPVFVFQVYSEAVALLVGMF*TMLGNS
Trigger: GCTATTCCCGAGCATCGTCAAAAACATGCCAACTAA...CAATGCAACGGCTTCAGAATATACCTGGAACACAAAAACTGGTCGGGGGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTATTAGTTGGCATGTTTTaGACGATGCTCGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLLVGMF*TMLGNS
Trigger: GCTATTCCCGAGCATCGTCAAAAACATGCCAACTAA...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGACAGCAGGTAAGCTCTaGTTTTCCCCTGTCGAGTGG +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLTAGKL*FSPVEW
Trigger: CCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTACGGGTCCCAGTGACTaGGGGAATAACTGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLITGPSD*GNNWLL
Trigger: GAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGT...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTCCAAGATTTCCTGCATaGCTCCTTTTGAAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCPRFPA*LLLKAS
Trigger: ACTTGCTTTCAAAAGGAGCAATGCAGGAAATCTTGG...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000474039.5
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 5 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCCAGGGTCAAGGAACTaGCACGTACTCTACGGAGCA +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIPGSRN*HVLYGA
Trigger: TGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGACAGCCAGCAAAGGTaGGCCCAACTGCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLDSQQR*AQLLYK
Trigger: TTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTATCAAGCCATTGGGCTaGATTGTCACCTTGAATTCA +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCIKPLG*IVTLNS
Trigger: TGAATTCAAGGTGACAATCAAGCCCAATGGCTTGAT...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTGACTTGGTTACTATaGAAGTCATCAAGCCATTGG +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGLTWLL*KSSSHW
Trigger: CCAATGGCTTGATGACTTCAATAGTAACCAAGTCAA...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATGGCACACTTCATCTTaGTGTCTGGTAGGGACACAG +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLWHTSS*CLVGTQ
Trigger: CTGTGTCCCTACCAGACACAAAGATGAAGTGTGCCA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTCTGCATTGCTCCTTTaGAAAGCAAGTTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWASALLL*KASSAP
Trigger: TGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354489.7
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAATGCAGCAGAAGTTGTaGATTGAAATGACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: QVYSEAVALRGAKWILWPMQQKL*IEMTSL
Trigger: CAAGGAAGTCATTTCAATCAACAACTTCTGCTGCAT...TGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGATAATGCAGCAGAAGTaGTTGATTGAAATGACTTCC +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGIMQQK*LIEMTS
Trigger: GGAAGTCATTTCAATCAACAACTTCTGCTGCATTAT...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGGTGACCTTAATTCTCTaGCAAGTCCAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVVTLIL*QVQNQQ
Trigger: TTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCAC...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTTTCATCGACCTCACTaGTCCCTGGGAAAAGTGGCC +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIFHRPH*SLGKVA
Trigger: GGCCACTTTTCCCAGGGACAAGTGAGGTCGATGAAA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTAGGGGCTTCATTACTGGCATaGGGAATAAGAGTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: TFPRVKELARTLRSNAVGASLLA*GIRVFK
Trigger: CTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGC...CCCTACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTGTCGGTCGTTTCTTaGGATCCCAATTCAACATTT +
Preference number: 5 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWLSVVS*DPNSTF
Trigger: AAATGTTGAATTGGGATCCAAAGAAACGACCGACAG...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp GTGTTCCAGGTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCCTGTCGGTCGTTTCTTaGGATCCCAATTCAACATTT +
Preference number: 5 (lower is better)
Translates to: VFQVYSEAVALRGAKWILLSVVS*DPNSTF
Trigger: AAATGTTGAATTGGGATCCAAAGAAACGACCGACAG...GAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATACCTGGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGTTTCAATGCCTGGCTaGCTGTCGGTCGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLVSMPG*LSVVSL
Trigger: CAAAGAAACGACCGACAGCAAGCCAGGCATTGAAAC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGTTGATTCCAGATGATTaGACGAAGGGCCTAATACCT +
Preference number: 5 (lower is better)
Translates to: SKCGGLFPFHWLSRTPSWLIPDD*TKGLIP
Trigger: AGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAA...CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp GTATATTCTGAAGCCGTTGCATTGAGAGGTGCTAAGTGGATCCTCTGGCCAGCTCAACTAAAGATGGCTTaGATTCTAATGGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VYSEAVALRGAKWILWPAQLKMA*ILMVAA
Trigger: AGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTG...AGCTGGCCAGAGGATCCACTTAGCACCTCTCAATGCAACGGCTTCAGAATATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACCTGACTCTGTTGCTTaGGAGGTTGCTGGACGCTCA +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQPDSVA*EVAGRS
Trigger: TGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACCCATGCTTGGCTTCTaGGAATGGGAGGCTCCGAAA +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQPMLGF*EWEAPK
Trigger: TTTCGGAGCCTCCCATTCCAAGAAGCCAAGCATGGG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTACAGCAGGTAAGCTCTaGTTTTCCCCTGTCGAGTGG +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLITAGKL*FSPVEW
Trigger: CCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGT...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAACGGGTCCCAGTGACTaGGGGAATAACTGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQTGPSD*GNNWLL
Trigger: GAGCAACCAGTTATTCCCCAAGTCACTGGGACCCGT...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCCTGCATTGCTCCTTTaGAAAGCAAGTTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLPALLL*KASSAP
Trigger: TGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313243.6
ENST00000474039.5
CDS-3UTR CAA 90 bp ACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCAAGATTTCCTGCATaGCTCCTTTTGAAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: TGCSKCGGLFPFHWLSRTPRFPA*LLLKAS
Trigger: ACTTGCTTTCAAAAGGAGCAATGCAGGAAATCTTGG...TGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTCTGAAGCCGTTGCATaGAGAGGTGCTAAGTGGATC +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLSEAVA*RGAKWI
Trigger: GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGCCCCCGACCAGTTTTaGTGTTCCAGGTATATTCTG +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLAPDQF*CSRYIL
Trigger: CAGAATATACCTGGAACACAAAAACTGGTCGGGGGC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AGATTTCCTGCATTGCTCCTTTTGAAAGCAAGTTCTGCCCCAACGGGTCCCAGTTCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: RFPALLLLKASSAPTGPSSKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...ACTGGGACCCGTTGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGTCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVSKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCCAGCCAAGAGAACCTaGACTTGGTTACTATTGAAG +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAPAKRT*TWLLLK
Trigger: CTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTATCTGCATTGCTCCTTTaGAAAGCAAGTTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLSALLL*KASSAP
Trigger: TGGGGCAGAACTTGCTTTCAAAAGGAGCAATGCAGA...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354489.7
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGACTGGCTCTGGAAGCTaGTGTGTAACATGTTTCTAT +
Preference number: 5 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWTGSGS*CVTCFY
Trigger: ATAGAAACATGTTACACACAAGCTTCCAGAGCCAGT...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CAA 90 bp CTATGTGATATCACTGCCCCAGCAGCTGAACGCACTTGCTTCAGAGCAAATGTGACACTGGTGACAGGTTaGTCATCATTAAATATAGTC +
Preference number: 5 (lower is better)
Translates to: LCDITAPAAERTCFRANVTLVTG*SSLNIV
Trigger: GACTATATTTAATGATGACAAACCTGTCACCAGTGT...CACATTTGCTCTGAAGCAAGTGCGTTCAGCTGCTGGGGCAGTGATATCACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp GTAGACATTTCCCAGGGTCAAGGAACTTGCACGTACTCTACGGAGCAATGCTGTATAATGCAGCAGAAGTaGTTGATTGAAATGACTTCC +
Preference number: 5 (lower is better)
Translates to: VDISQGQGTCTYSTEQCCIMQQK*LIEMTS
Trigger: GGAAGTCATTTCAATCAACAACTTCTGCTGCATTAT...ACAGCATTGCTCCGTAGAGTACGTGCAAGTTCCTTGACCCTGGGAAATGTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCCAACTGTCTCATGGTaGTGTATCGGTTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLPTVSW*CIGSSW
Trigger: CCAAGATGAACCGATACACAACCATGAGACAGTTGG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp ACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACAGTGACCTTAATTCTCTaGCAAGTCCAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: TGCSKCGGLFPFHWLSRTVTLIL*QVQNQQ
Trigger: TTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCAC...TGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGGTGACCTTAATTCTCTaGCAAGTCCAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWVTLIL*QVQNQQ
Trigger: TTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCAC...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCTGTCGGTCGTTTCTTaGGATCCCAATTCAACATTT +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWALSVVS*DPNSTF
Trigger: AAATGTTGAATTGGGATCCAAAGAAACGACCGACAG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGAGTTTTTGGCTGGGGTaGTCCAACAACCTGATCGAT +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLSFWLG*SNNLID
Trigger: ATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGATCAAGGACACCTTCTaGGGATTCACACCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLIKDTF*GFTPGR
Trigger: TCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGAT...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTTGGGGAATAACTGGTaGCTCCAAGTGTGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLILGNNW*LQVWGF
Trigger: AAACCCCCACACTTGGAGCAACCAGTTATTCCCCAA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGTCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: SKCGGLFPFHWLSRTPSWSKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...CCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAACCCCCACACTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAGACAGCCAGCAAAGGTaGGCCCAACTGCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQDSQQR*AQLLYK
Trigger: TTTGTACAGCAGTTGGGCCAACCTTTGCTGGCTGTC...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTATATCCTGCTCAAGATaGAAATTACCATCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAISCSR*KLPSLP
Trigger: TGGGAGCGATGGTAATTTCAATCTTGAGCAGGATAT...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTGGCTTGATTGTCACCTaGAATTCATGGGAACTGTAC +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAGLIVT*NSWELY
Trigger: GTACAGTTCCCATGAATTCAAGGTGACAATCAAGCC...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTATCAAGCCATTGGGCTaGATTGTCACCTTGAATTCA +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAIKPLG*IVTLNS
Trigger: TGAATTCAAGGTGACAATCAAGCCCAATGGCTTGAT...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATGGCACACTTCATCTTaGTGTCTGGTAGGGACACAG +
Preference number: 5 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEWHTSS*CLVGTQ
Trigger: CTGTGTCCCTACCAGACACAAAGATGAAGTGTGCCA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTTGGGGAATAACTGGTTGCTCCAAGTGTGGGGGTTTATTTCCTTTCCACTGGATAATGCAGCAGAAGTaGTTGATTGAAATGACTTCC +
Preference number: 5 (lower is better)
Translates to: TWGITGCSKCGGLFPFHWIMQQK*LIEMTS
Trigger: GGAAGTCATTTCAATCAACAACTTCTGCTGCATTAT...CCAGTGGAAAGGAAATAAACCCCCACACTTGGAGCAACCAGTTATTCCCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAACCAACTGTCTCATGGTaGTGTATCGGTTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEPTVSW*CIGSSW
Trigger: CCAAGATGAACCGATACACAACCATGAGACAGTTGG...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp ACTTGCACGTACTCTACGGAGCAATGCTGTAGGGTTTCACACCATAGACTCCTAGCTTCATTACTGGCATaGGGAATAAGAGTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: TCTYSTEQCCRVSHHRLLASLLA*GIRVFK
Trigger: CTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGC...TAGGAGTCTATGGTGTGAAACCCTACAGCATTGCTCCGTAGAGTACGTGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTTTGATTCCAGATGATTaGACGAAGGGCCTAATACCT +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTALIPDD*TKGLIP
Trigger: AGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAA...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TTTATTTCCTTTCCACTGGCTATCAAGGACACCTTCTTGGGATTCACACCTGGATTGATTCCAGATGATTaGACGAAGGGCCTAATACCT +
Preference number: 5 (lower is better)
Translates to: FISFPLAIKDTFLGFTPGLIPDD*TKGLIP
Trigger: AGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAA...TCCAGGTGTGAATCCCAAGAAGGTGTCCTTGATAGCCAGTGGAAAGGAAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTCAACTAAAGATGGCTTaGATTCTAATGGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAQLKMA*ILMVAA
Trigger: AGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTG...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATCTGAAGCCGTTGCATaGAGAGGTGCTAAGTGGATC +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQSEAVA*RGAKWI
Trigger: GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAATATCCTGCTCAAGATaGAAATTACCATCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLISCSR*KLPSLP
Trigger: TGGGAGCGATGGTAATTTCAATCTTGAGCAGGATAT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAATCAAGCCATTGGGCTaGATTGTCACCTTGAATTCA +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLIKPLG*IVTLNS
Trigger: TGAATTCAAGGTGACAATCAAGCCCAATGGCTTGAT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTATCAAGCCATTGGGCTaGATTGTCACCTTGAATTCA +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAIKPLG*IVTLNS
Trigger: TGAATTCAAGGTGACAATCAAGCCCAATGGCTTGAT...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAGAAGTCATCAAGCCATaGGGCTTGATTGTCACCTTG +
Preference number: 5 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEEVIKP*GLIVTL
Trigger: CAAGGTGACAATCAAGCCCAATGGCTTGATGACTTC...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTTGACTTGGTTACTATaGAAGTCATCAAGCCATTGG +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWALTWLL*KSSSHW
Trigger: CCAATGGCTTGATGACTTCAATAGTAACCAAGTCAA...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTACACTGGTGACAGGTTaGTCATCATTAAATATAGTC +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWATLVTG*SSLNIV
Trigger: GACTATATTTAATGATGACAAACCTGTCACCAGTGT...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTAATGCAGCAGAAGTTGTaGATTGAAATGACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLMQQKL*IEMTSL
Trigger: CAAGGAAGTCATTTCAATCAACAACTTCTGCTGCAT...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAACCAACTGTCTCATGGTaGTGTATCGGTTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQPTVSW*CIGSSW
Trigger: CCAAGATGAACCGATACACAACCATGAGACAGTTGG...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp CCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTGCTTCATTACTGGCATaGGGAATAAGAGTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: PAKRTLTWLLLKSSSHWAASLLA*GIRVFK
Trigger: CTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGC...AGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCTGTCGGTCGTTTCTTaGGATCCCAATTCAACATTT +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLLSVVS*DPNSTF
Trigger: AAATGTTGAATTGGGATCCAAAGAAACGACCGACAG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACAACTAAAGATGGCTTaGATTCTAATGGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLQLKMA*ILMVAA
Trigger: AGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTTTAGTTGGCATGTTTTaGACGATGCTCGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLILVGMF*TMLGNS
Trigger: GCTATTCCCGAGCATCGTCAAAAACATGCCAACTAA...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGCAATCTTTCTGTCATaGACAAAATGGCAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIAIFLS*TKWQRR
Trigger: TCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGC...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAGGCTTGATTGTCACCTaGAATTCATGGGAACTGTAC +
Preference number: 5 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEGLIVT*NSWELY
Trigger: GTACAGTTCCCATGAATTCAAGGTGACAATCAAGCC...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGGCTTGATTGTCACCTaGAATTCATGGGAACTGTAC +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIGLIVT*NSWELY
Trigger: GTACAGTTCCCATGAATTCAAGGTGACAATCAAGCC...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTCAAGAGAACCTTGACTaGGTTACTATTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTAQENLD*VTIEVI
Trigger: GATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CCAGTCCAGAAAGTGGCAGATTTAAACAGAGTAGCCCAAAGTTCGAAGTGTCTACAAGAGAACCTTGACTaGGTTACTATTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: PVQKVADLNRVAQSSKCLQENLD*VTIEVI
Trigger: GATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG...TAGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AAACAGAATCTTGCTCCAAGTACACAGCCGGTTAGTAGTAGCAGGTCAGTAACTGCCCTGGAAGATATCTaGATTGTTTCAAGTAGTACT +
Preference number: 5 (lower is better)
Translates to: KQNLAPSTQPVSSSRSVTALEDI*IVSSST
Trigger: AGTACTACTTGAAACAATCAAGATATCTTCCAGGGC...AGTTACTGACCTGCTACTACTAACCGGCTGTGTACTTGGAGCAAGATTCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675026.1
CDS-3UTR CAA 90 bp TCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATAAGAACCACAGCTACACTGGTGACAGGTTaGTCATCATTAAATATAGTC +
Preference number: 5 (lower is better)
Translates to: SVIDKMAAQSLSQIRTTATLVTG*SSLNIV
Trigger: GACTATATTTAATGATGACAAACCTGTCACCAGTGT...AGCTGTGGTTCTTATTTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGTGACCTTAATTCTCTaGCAAGTCCAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLVTLIL*QVQNQQ
Trigger: TTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCAC...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCTGTCGGTCGTTTCTTaGGATCCCAATTCAACATTT +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLILSVVS*DPNSTF
Trigger: AAATGTTGAATTGGGATCCAAAGAAACGACCGACAG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAATTGATTCCAGATGATTaGACGAAGGGCCTAATACCT +
Preference number: 5 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWELIPDD*TKGLIP
Trigger: AGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAA...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATTAGTTGGCATGTTTTaGACGATGCTCGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQLVGMF*TMLGNS
Trigger: GCTATTCCCGAGCATCGTCAAAAACATGCCAACTAA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTTTGGGGAATAACTGGTaGCTCCAAGTGTGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDILGNNW*LQVWGF
Trigger: AAACCCCCACACTTGGAGCAACCAGTTATTCCCCAA...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTTCTGAAGCCGTTGCATaGAGAGGTGCTAAGTGGATC +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDISEAVA*RGAKWI
Trigger: GATCCACTTAGCACCTCTCAATGCAACGGCTTCAGA...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000538030.3
ENST00000675026.1
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGCCCCCGACCAGTTTTaGTGTTCCAGGTATATTCTG +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIAPDQF*CSRYIL
Trigger: CAGAATATACCTGGAACACAAAAACTGGTCGGGGGC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAGCAATCTTTCTGTCATaGACAAAATGGCAGCGCAGA +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQAIFLS*TKWQRR
Trigger: TCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGC...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTATCAAGCCATTGGGCTaGATTGTCACCTTGAATTCA +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIIKPLG*IVTLNS
Trigger: TGAATTCAAGGTGACAATCAAGCCCAATGGCTTGAT...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGTTGACTTGGTTACTATaGAAGTCATCAAGCCATTGG +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLLTWLL*KSSSHW
Trigger: CCAATGGCTTGATGACTTCAATAGTAACCAAGTCAA...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ATGTCCAGCCAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGCAAGAGAACCTTGACTaGGTTACTATTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: MSSQENLDLVTIEVIKPLQENLD*VTIEVI
Trigger: GATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG...CAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTGGCTGGACAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp ACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTCACCTTGAATTCATGGGAAATGCAGCAGAAGTTGTaGATTGAAATGACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: TIEVIKPLGLIVTLNSWEMQQKL*IEMTSL
Trigger: CAAGGAAGTCATTTCAATCAACAACTTCTGCTGCAT...TTCCCATGAATTCAAGGTGACAATCAAGCCCAATGGCTTGATGACTTCAATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTGTGACCTTAATTCTCTaGCAAGTCCAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIVTLIL*QVQNQQ
Trigger: TTGCTGATTTTGGACTTGCAAGAGAATTAAGGTCAC...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAATTGATTCCAGATGATTaGACGAAGGGCCTAATACCT +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQLIPDD*TKGLIP
Trigger: AGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAA...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTAGTTTTTGGCTGGGGTaGTCCAACAACCTGATCGAT +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDISFWLG*SNNLID
Trigger: ATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACT...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTATCAAGGACACCTTCTaGGGATTCACACCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIIKDTF*GFTPGR
Trigger: TCTTCCAGGTGTGAATCCCAAGAAGGTGTCCTTGAT...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000676116.1
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTCAAGAGAACCTTGACTaGGTTACTATTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIQENLD*VTIEVI
Trigger: GATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp AATAATTGCAATCTTTCTGTCATTGACAAAATGGCAGCGCAGAGCCTTAGTCAAATGCAGCAGAAGTTGTaGATTGAAATGACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: NNCNLSVIDKMAAQSLSQMQQKL*IEMTSL
Trigger: CAAGGAAGTCATTTCAATCAACAACTTCTGCTGCAT...TTGACTAAGGCTCTGCGCTGCCATTTTGTCAATGACAGAAAGATTGCAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp CAAGAGAACCTTGACTTGGTTACTATTGAAGTCATCAAGCCATTGGGCTTGATTATAATGCAGCAGAAGTaGTTGATTGAAATGACTTCC +
Preference number: 5 (lower is better)
Translates to: QENLDLVTIEVIKPLGLIIMQQK*LIEMTS
Trigger: GGAAGTCATTTCAATCAACAACTTCTGCTGCATTAT...AATCAAGCCCAATGGCTTGATGACTTCAATAGTAACCAAGTCAAGGTTCTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCTGTCGGTCGTTTCTTaGGATCCCAATTCAACATTT +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDILSVVS*DPNSTF
Trigger: AAATGTTGAATTGGGATCCAAAGAAACGACCGACAG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTCAACTAAAGATGGCTTaGATTCTAATGGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIQLKMA*ILMVAA
Trigger: AGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTG...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTTCCAAGTACCCACTTTaGCATATTTCTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDISKYPL*HISSRT
Trigger: AGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGA...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTTTGACTTGGTTACTATaGAAGTCATCAAGCCATTGG +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDILTWLL*KSSSHW
Trigger: CCAATGGCTTGATGACTTCAATAGTAACCAAGTCAA...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000676116.1
CDS-3UTR CAA 90 bp TTCCAAGTACCCACTTTTGCATATTTCTTCCAGAACTCAGTAGAAATAGACATTGCTTCATTACTGGCATaGGGAATAAGAGTTTTTAAG +
Preference number: 5 (lower is better)
Translates to: FQVPTFAYFFQNSVEIDIASLLA*GIRVFK
Trigger: CTTAAAAACTCTTATTCCCAATGCCAGTAATGAAGC...AATGTCTATTTCTACTGAGTTCTGGAAGAAATATGCAAAAGTGGGTACTTGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CAA 72 bp AACACCCGGCGTCAGGGACCGGTCTCCGGGCGGAGATaGGCCCTGGTAGCACAGGGCGCCGAGGGGACATGC +
Preference number: 6 (lower is better)
Translates to: NTRRQGPVSGRR*ALVAQGAEGTC
Trigger: GCATGTCCCCTCGGCGCCCTGTGCTACCAGGGCCAATCTCCGCCCGGAGACCGGTCCCTGACGCCGGGTGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313243.6
ENST00000675026.1
CDS CAA 90 bp ATTCTTATAAACACCCGGCGTCAGGGACCGGTCTCCGGGCGGAGATaGGCCCTGGTAGCACAGGGCGCCGAGGGGACATGCCCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ILINTRRQGPVSGRR*ALVAQGAEGTCPAS
Trigger: GCTGGCCGGGCATGTCCCCTCGGCGCCCTGTGCTACCAGGGCCAATCTCCGCCCGGAGACCGGTCCCTGACGCCGGGTGTTTATAAGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313243.6
ENST00000675026.1
CDS CCA 72 bp CTGTTGCTTTGGAGGTTGCTGGACGCTCAGGTTCTGTaGCGGCTGAATGGGCTGCAGTGGCTGCTGGCTAGT +
Preference number: 6 (lower is better)
Translates to: LLLWRLLDAQVL*RLNGLQWLLAS
Trigger: ACTAGCCAGCAGCCACTGCAGCCCATTCAGCCGCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CAA 90 bp TGCTCGGGAATAGCGTTTGTGGCGGTTTCTCCTGACTCTGTTGCTTaGGAGGTTGCTGGACGCTCAGGTTCTGTGGCGGCTGAATGGGCT +
Preference number: 6 (lower is better)
Translates to: CSGIAFVAVSPDSVA*EVAGRSGSVAAEWA
Trigger: AGCCCATTCAGCCGCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CAA 72 bp CTTTTGATGGCCACCAGCTCCCCGGATTCATTACTCTaGCCCATAAGCACACTCCCATACGTGCCGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LLMATSSPDSLL*PISTLPYVPSP
Trigger: GGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGAGTAATGAATCCGGGGAGCTGGTGGCCATCAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS CAA 90 bp CGGCTGAATGGGCTGCAGTGGCTGCTGGCTAGTTTTTGGCTGGGGTaGTCCAACAACCTGATCGATTATATCCGGCAGAGGCTTAGGCTC +
Preference number: 6 (lower is better)
Translates to: RLNGLQWLLASFWLG*SNNLIDYIRQRLRL
Trigger: GAGCCTAAGCCTCTGCCGGATATAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS TCA 72 bp ACGATGCTCGGGAATAGCGTTTGTGGCGGTTTCTCCTaGCTCTGTTGCTTTGGAGGTTGCTGGACGCTCAGG +
Preference number: 6 (lower is better)
Translates to: TMLGNSVCGGFS*LCCFGGCWTLR
Trigger: CCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTATTCCCGAGCATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CCA 72 bp CAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTGGTTaGAGCCTGAGGGTACTGGCTCTGGAAGCCGAAATG +
Preference number: 6 (lower is better)
Translates to: QQVSSCFPLSSG*SLRVLALEAEM
Trigger: CATTTCGGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000675026.1
ENST00000676116.1
CDS CCA 72 bp GTAACAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTaGTTGGAGCCTGAGGGTACTGGCTCTGGAAGCCGA +
Preference number: 6 (lower is better)
Translates to: VTAGKLLFSPVE*LEPEGTGSGSR
Trigger: TCGGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000675026.1
ENST00000676116.1
CDS CAA 72 bp GGGCTGCAGTGGCTGCTGGCTAGTTTTTGGCTGGGGTaGTCCAACAACCTGATCGATTATATCCGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GLQWLLASFWLG*SNNLIDYIRQR
Trigger: CCTCTGCCGGATATAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CAA 72 bp ATAGCGTTTGTGGCGGTTTCTCCTGACTCTGTTGCTTaGGAGGTTGCTGGACGCTCAGGTTCTGTGGCGGCT +
Preference number: 6 (lower is better)
Translates to: IAFVAVSPDSVA*EVAGRSGSVAA
Trigger: AGCCGCCACAGAACCTGAGCGTCCAGCAACCTCCAAAGCAACAGAGTCAGGAGAAACCGCCACAAACGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CAA 72 bp ACAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGCTCTGGAAGCCGAAAT +
Preference number: 6 (lower is better)
Translates to: TAGKLLFSPVEW*EPEGTGSGSRN
Trigger: ATTTCGGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000675026.1
ENST00000676116.1
CDS CCA 72 bp CGGCTGAATGGGCTGCAGTGGCTGCTGGCTAGTTTTTaGCTGGGGTTGTCCAACAACCTGATCGATTATATC +
Preference number: 6 (lower is better)
Translates to: RLNGLQWLLASF*LGLSNNLIDYI
Trigger: GATATAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCAGCCACTGCAGCCCATTCAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CAA 90 bp AGGGAAGTAACAGCAGGTAAGCTCTTGTTTTCCCCTGTCGAGTGGTaGGAGCCTGAGGGTACTGGCTCTGGAAGCCGAAATGGAGAATCT +
Preference number: 6 (lower is better)
Translates to: REVTAGKLLFSPVEW*EPEGTGSGSRNGES
Trigger: AGATTCTCCATTTCGGCTTCCAGAGCCAGTACCCTCAGGCTCCAACCACTCGACAGGGGAAAACAAGAGCTTACCTGCTGTTACTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000675026.1
ENST00000676116.1
CDS TCA 72 bp TGCTGGCTAGTTTTTGGCTGGGGTTGTCCAACAACCTaGTCGATTATATCCGGCAGAGGCTTAGGCTCTACC +
Preference number: 6 (lower is better)
Translates to: CWLVFGWGCPTT*SIISGRGLGST
Trigger: GGTAGAGCCTAAGCCTCTGCCGGATATAATCGATCAGGTTGTTGGACAACCCCAGCCAAAAACTAGCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CCA 72 bp GCACACTCCCATACGTGCCGTCCCCCAACTGTCTCATaGTTGTGTATCGGTTCATCTTGGAAAAATAATGCA +
Preference number: 6 (lower is better)
Translates to: AHSHTCRPPTVS*LCIGSSWKNNA
Trigger: TGCATTATTTTTCCAAGATGAACCGATACACAACCATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS CAA 72 bp CACTCCCATACGTGCCGTCCCCCAACTGTCTCATGGTaGTGTATCGGTTCATCTTGGAAAAATAATGCAGCA +
Preference number: 6 (lower is better)
Translates to: HSHTCRPPTVSW*CIGSSWKNNAA
Trigger: TGCTGCATTATTTTTCCAAGATGAACCGATACACAACCATGAGACAGTTGGGGGACGGCACGTATGGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS GCA 72 bp TTGTGTGTAACATGTTTCTATCTGTCCTGCAACGGCTaGAGTTGGATTCATAACGTGGGAAACTGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: LCVTCFYLSCNG*SWIHNVGNWCA
Trigger: AGCACACCAGTTTCCCACGTTATGAATCCAACTGCAGCCGTTGCAGGACAGATAGAAACATGTTACACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538030.3
CDS CAA 72 bp TGTCCTCACACTGTTGTTGCTACACTGGTGACAGGTTaGTCATCATTAAATATAGTCTCTCCCCCAAGATTA +
Preference number: 6 (lower is better)
Translates to: CPHTVVATLVTG*SSLNIVSPPRL
Trigger: TAATCTTGGGGGAGAGACTATATTTAATGATGACAAACCTGTCACCAGTGTAGCAACAACAGTGTGAGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
CDS CAA 90 bp ATGGTTGCAGCTGCTTATTTAAAGACTGTTTTGATTCCAGATGATTaGACGAAGGGCCTAATACCTGACCAACTTGAAAATATGGGTGTT +
Preference number: 6 (lower is better)
Translates to: MVAAAYLKTVLIPDD*TKGLIPDQLENMGV
Trigger: AACACCCATATTTTCAAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTCTTTAAATAAGCAGCTGCAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS CAA 90 bp ATGGCTTTGATTCTAATGGTTGCAGCTGCTTATTTAAAGACTGTTTaGATTCCAGATGATTTGACGAAGGGCCTAATACCTGACCAACTT +
Preference number: 6 (lower is better)
Translates to: MALILMVAAAYLKTV*IPDDLTKGLIPDQL
Trigger: AAGTTGGTCAGGTATTAGGCCCTTCGTCAAATCATCTGGAATCAAAACAGTCTTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1
CDS GCA 72 bp TCTACCTCAACTAAAGATGGCTTTGATTCTAATGGTTaGAGCTGCTTATTTAAAGACTGTTTTGATTCCAGA +
Preference number: 6 (lower is better)
Translates to: STSTKDGFDSNG*SCLFKDCFDSR
Trigger: TCTGGAATCAAAACAGTCTTTAAATAAGCAGCTGCAACCATTAGAATCAAAGCCATCTTTAGTTGAGGTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313243.6
ENST00000354489.7
ENST00000474039.5
ENST00000536370.6
ENST00000538030.3
ENST00000675026.1
ENST00000676116.1