RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAGI3 (Homo sapiens)

Ensembl gene IDs: ENSG00000081026

Ensembl transcript IDs: ENST00000307546.14, ENST00000369611.4, ENST00000369615.5, ENST00000369617.8, ENST00000477955.1, ENST00000486456.1

Found 675 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGACGAGCTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTaGATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGG +
Preference number: 1 (lower is better)
Translates to: EDELGSLSRAGQMSM*MQLLPESEGGQPAR
Trigger: CCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAGCTCGTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR TCA 90 bp CCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTaGGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTTCTTA +
Preference number: 1 (lower is better)
Translates to: PEQGGSDEHVDAAPS*ERGRAAGQGDSWFL
Trigger: TAAGAACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR GCA 90 bp CGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATaGAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTG +
Preference number: 1 (lower is better)
Translates to: RPGGQLVLSNPKGPS*SLGNLRLTLTCTYL
Trigger: CAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR GCA 90 bp GCATACCCTACACAGGTTGTTTTTAAACACCCAAGCTTGTGCACCTaGTACCAGAAGAGTTGGTACTTGGACTGTGAAACTGGTTTCATG +
Preference number: 1 (lower is better)
Translates to: AYPTQVVFKHPSLCT*YQKSWYLDCETGFM
Trigger: CATGAAACCAGTTTCACAGTCCAAGTACCAACTCTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTTAAAAACAACCTGTGTAGGGTATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR TCA 90 bp CAAAAATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTaGGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGA +
Preference number: 1 (lower is better)
Translates to: QKSHSGKHVLSTGAN*VVGLKSFTVRLPEG
Trigger: TCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR CCA 90 bp GTTGTTTTTAAACACCCAAGCTTGTGCACCTGCTACCAGAAGAGTTaGTACTTGGACTGTGAAACTGGTTTCATGATTAAGTCCCTCACA +
Preference number: 1 (lower is better)
Translates to: VVFKHPSLCTCYQKS*YLDCETGFMIKSLT
Trigger: TGTGAGGGACTTAATCATGAAACCAGTTTCACAGTCCAAGTACCAACTCTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTTAAAAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR TCA 90 bp CCTGCTACCAGAAGAGTTGGTACTTGGACTGTGAAACTGGTTTCATaGTTAAGTCCCTCACATAATCTATATAATATGTTTACTTTTCAA +
Preference number: 1 (lower is better)
Translates to: PATRRVGTWTVKLVS*LSPSHNLYNMFTFQ
Trigger: TTGAAAAGTAAACATATTATATAGATTATGTGAGGGACTTAATCATGAAACCAGTTTCACAGTCCAAGTACCAACTCTTCTGGTAGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR CAA 90 bp AGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTaGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAAC +
Preference number: 2 (lower is better)
Translates to: SSFLRAREGSRPGGQ*VLSNPKGPSCSLGN
Trigger: GTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR GCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCATCTTGTCCAGAGCCTaGCCTGGTGCTGACCTGACA +
Preference number: 2 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCILSRA*PGADLT
Trigger: TGTCAGGTCAGCACCAGGGCAGGCTCTGGACAAGAT...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR TCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACGCAGGGCGGGTCAGATaGGCATGTGGATGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDAGRVR*ACGCSS
Trigger: GGAGCTGCATCCACATGCTCATCTGACCCGCCCTGC...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAGATGCAGCTCCTTCCTaGGAGCGAGGGAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTDAAPS*ERGRAA
Trigger: GGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCATC...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCCATGCAACATGCTATTaGGATCATCAACTTCCAAGC +
Preference number: 2 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCHATCY*DHQLPS
Trigger: GCTTGGAAGTTGATGATCTCAATAGCATGTTGCATG...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCTTTGTCCTCATTTGCTaGGCATACCCTACACAGGTT +
Preference number: 2 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSFVLIC*AYPTQV
Trigger: AACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAA...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR GCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCTTCTCTTCAGGTTCTTaGTTCAGCCTCTTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCFSSGS*FSLFSD
Trigger: ATCAGAAAAGAGGCTGAAGCAAGAACCTGAAGAGAA...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR CCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACGGTCAGATGAGCATGTaGATGCAGCTCCTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDGQMSM*MQLLPE
Trigger: CTCAGGAAGGAGCTGCATCCACATGCTCATCTGACC...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCAGTATACATCGAGGTTaGATAACACAGCAGGAGATG +
Preference number: 2 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSSIHRG*ITQQEM
Trigger: CATCTCCTGCTGTGTTATCCAACCTCGATGTATACT...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCTGCTACCAGAAGAGTTaGTACTTGGACTGTGAAACT +
Preference number: 2 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSCYQKS*YLDCET
Trigger: AGTTTCACAGTCCAAGTACCAACTCTTCTGGTAGCA...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTCTGGGGCTGAGGGATTaGTCTCTGGGTCTTCTTTTG +
Preference number: 2 (lower is better)
Translates to: IWDLLSITARIACYSSTLLGLRD*SLGLLL
Trigger: CAAAAGAAGACCCAGAGATCAATCCCTCAGCCCCAG...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR GCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACCCAAGCTTGTGCACCTaGTACCAGAAGAGTTGGTAC +
Preference number: 2 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDPSLCT*YQKSWY
Trigger: GTACCAACTCTTCTGGTAGCAGGTGCACAAGCTTGG...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCAGAAGAGTTGGTACTTaGACTGTGAAACTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSRRVGT*TVKLVS
Trigger: TGAAACCAGTTTCACAGTCCAAGTACCAACTCTTCT...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGGATGCAGCTCCTTCCTaGGAGCGAGGGAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWDAAPS*ERGRAA
Trigger: GGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCATC...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCATAAAAAGGGTGACCTaGGATGCTGTAAGTATACAT +
Preference number: 2 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSIKRVT*DAVSIH
Trigger: ATGTATACTTACAGCATCTCAGGTCACCCTTTTTAT...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACTTGTTACTGTGCCCATaGCTGCTGGGTGGATCCCTC +
Preference number: 2 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYLLLCP*LLGGSL
Trigger: GAGGGATCCACCCAGCAGTCATGGGCACAGTAACAA...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR CCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAGGTCAGATGAGCATGTaGATGCAGCTCCTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTGQMSM*MQLLPE
Trigger: CTCAGGAAGGAGCTGCATCCACATGCTCATCTGACC...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAGCAGGGCGGGTCAGATaGGCATGTGGATGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: AIEIINFQAKPNFFITVEAGRVR*ACGCSS
Trigger: GGAGCTGCATCCACATGCTCATCTGACCCGCCCTGC...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACTGCTTCACAACAAGATaGACCCAGGTGACAGAACAA +
Preference number: 2 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDCFTTR*TQVTEQ
Trigger: TTGTTCTGTCACCTGGGTTCATCTTGTTGTGAAGCA...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCTGCTTTTTCTGCACTaGTCTTGTCCAGAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGLLFLH*SCPEPA
Trigger: GGCAGGCTCTGGACAAGATCAGTGCAGAAAAAGCAG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR GCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACACCTAAAGGCCCTTCATaGAGCCTAGGTAACTTGAGG +
Preference number: 2 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTPKGPS*SLGNLR
Trigger: CCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGG...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTGGCCAGGGGGACAGTTaGTTCTTAGCAATCCTAAAG +
Preference number: 2 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGGQGDS*FLAILK
Trigger: CTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCC...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTAGCCTGCCCTGGTGCTaGCCTGACAACTTTTATTTT +
Preference number: 2 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGSLPWC*PDNFYF
Trigger: AAAATAAAAGTTGTCAGGTCAGCACCAGGGCAGGCT...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR GCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACAAACACCCAAGCTTGTaGACCTGCTACCAGAAGAGT +
Preference number: 2 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYKHPSL*TCYQKS
Trigger: ACTCTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR GCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTTCTGCTCAGCATTACTaGCCGTATAGCCTGCTATTC +
Preference number: 2 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFSAQHY*PYSLLF
Trigger: GAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGA...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR GCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTACATTTGTCCTCATTTaGTGGGCATACCCTACACAG +
Preference number: 2 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGTFVLI*WAYPTQ
Trigger: CTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGT...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGAGATTCTTCAATTACTaGCACGTGAGACTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: TYVICSDTHEDELGSLSRRFFNY*HVRLFK
Trigger: TTTGAAGAGTCTCACGTGCCAGTAATTGAAGAATCT...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR CAA 90 bp CCTGGAGTTATCAGTGTTTTCTTAACTGGAGAACTGCTTTCCGGTTaGAACCTTCCAGTCTCTTTGTTTTTGTCAGCTGCCTCTAGTTCT +
Preference number: 2 (lower is better)
Translates to: PGVISVFLTGELLSG*NLPVSLFLSAASSS
Trigger: AGAACTAGAGGCAGCTGACAAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAAACACTGATAACTCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTGCTGCTTCAGGGAACTaGAAAACCTGGATCTATTTT +
Preference number: 2 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGAASGN*KTWIYF
Trigger: AAAATAGATCCAGGTTTTTCAGTTCCCTGAAGCAGC...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACATCAATTACTGGCACGTaGGACTCTTCAAATATGGAA +
Preference number: 2 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTSITGT*DSSNME
Trigger: TTCCATATTTGAAGAGTCTCACGTGCCAGTAATTGA...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR GCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGTACTGTGCCCATGACTaGTGGGTGGATCCCTCTTAC +
Preference number: 2 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWYCAHD*WVDPSY
Trigger: GTAAGAGGGATCCACCCAGCAGTCATGGGCACAGTA...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR CCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGTGTGCCCATGACTGCTaGGTGGATCCCTCTTACTCA +
Preference number: 2 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKCAHDC*VDPSYS
Trigger: TGAGTAAGAGGGATCCACCCAGCAGTCATGGGCACA...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTTTATATAGATGCTACTaGATGCTGCTTCAGGGAACT +
Preference number: 2 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGLYRCY*MLLQGT
Trigger: AGTTCCCTGAAGCAGCATTCAGTAGCATCTATATAA...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAATCTTCTGTTTTGTTTaGAACTACCTTCTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTIFCFV*NYLLFR
Trigger: CCTGAAGAGAAGGTAGTTTCAAACAAAACAGAAGAT...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR GCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGCCTAAAGGCCCTTCATaGAGCCTAGGTAACTTGAGG +
Preference number: 2 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKPKGPS*SLGNLR
Trigger: CCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGG...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR GCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACATAGATGCTACTGAATaGTGCTTCAGGGAACTGAAA +
Preference number: 2 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYIDATE*CFRELK
Trigger: TTTCAGTTCCCTGAAGCAGCATTCAGTAGCATCTAT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR GCA 90 bp TTTCTTAACTGGAGAACTGCTTTCCGGTTTGAACCTTCCAGTCTCTTTGTTTTTCAACTGATTCTGCTTTaGATCTTTCCTGATGACGTC +
Preference number: 2 (lower is better)
Translates to: FLNWRTAFRFEPSSLFVFQLILL*IFPDDV
Trigger: GACGTCATCAGGAAAGATGCAAAGCAGAATCAGTTG...AAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR TCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGGGCACAAATACAAAGTaGGTTGTGACCACATTGTTA +
Preference number: 2 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWGTNTK*VVTTLL
Trigger: TAACAATGTGGTCACAACTCACTTTGTATTTGTGCC...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR TCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGGCCTTTTCACATATCTaGACTCTCAAAGATTCTTCA +
Preference number: 2 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKAFSHI*TLKDSS
Trigger: TGAAGAATCTTTGAGAGTTCAGATATGTGAAAAGGC...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR TCA 72 bp GGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTaGGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGT +
Preference number: 3 (lower is better)
Translates to: GGSDEHVDAAPS*ERGRAAGQGDS
Trigger: ACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR CCA 72 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTaGATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: LGSLSRAGQMSM*MQLLPESEGGQ
Trigger: CTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CAA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCTTTAAACACCCAAGCTaGTGCACCTGCTACCAGAAG +
Preference number: 3 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSFKHPS*CTCYQK
Trigger: CTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTTAAA...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CAA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCAACCTTCCAGTCTCTTaGTTTTTGTCAGCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSNLPVS*FLSAAS
Trigger: AGAGGCAGCTGACAAAAACAAAGAGACTGGAAGGTT...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR CAA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCTTACCCTCTAATAATTaGGCCTCAGCATTTGATGGA +
Preference number: 3 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSLPSNN*ASAFDG
Trigger: TCCATCAAATGCTGAGGCCAAATTATTAGAGGGTAA...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR CAA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGTGCAGCCTAGGTAACTaGAGGCTCACATTAACATGT +
Preference number: 3 (lower is better)
Translates to: TYVICSDTHEDELGSLSRCSLGN*RLTLTC
Trigger: ACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CAA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTCGGCCAGGGGGACAGTaGGTTCTTAGCAATCCTAAA +
Preference number: 3 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFRPGGQ*VLSNPK
Trigger: TTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCG...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CAA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACCAGAAGAGTTGGTACTaGGACTGTGAAACTGGTTTC +
Preference number: 3 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDQKSWY*DCETGF
Trigger: GAAACCAGTTTCACAGTCCAAGTACCAACTCTTCTG...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR GCA 72 bp ATTTTTCCTTCCCATCTGGGATCTGCTCAGCATTACTaGCCGTATAGCCTGCTATTCTTCGACTCTTACCCT +
Preference number: 3 (lower is better)
Translates to: IFPSHLGSAQHY*PYSLLFFDSYP
Trigger: AGGGTAAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGATGGGAAGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR CAA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCAGTACATCCACATTTaGCTCAGCATTCCAAGGCCA +
Preference number: 3 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGQYIHI*LSIPRP
Trigger: TGGCCTTGGAATGCTGAGCAAAATGTGGATGTACTG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR GCA 72 bp GGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATaGAGCCTAGGTAACTTGAGGCTCACATTAACATGT +
Preference number: 3 (lower is better)
Translates to: GQLVLSNPKGPS*SLGNLRLTLTC
Trigger: ACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR GCA 72 bp TACCCTACACAGGTTGTTTTTAAACACCCAAGCTTGTaGACCTGCTACCAGAAGAGTTGGTACTTGGACTGT +
Preference number: 3 (lower is better)
Translates to: YPTQVVFKHPSL*TCYQKSWYLDC
Trigger: ACAGTCCAAGTACCAACTCTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTTAAAAACAACCTGTGTAGGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CAA 90 bp TTTCTTAACTGGAGAACTGCTTTCCGGTTTGAACCTTCCAGTCTCTTTGTTTTTGCTGGGGCTGAGGGATaGATCTCTGGGTCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: FLNWRTAFRFEPSSLFVFAGAEG*ISGSSF
Trigger: AAAAGAAGACCCAGAGATCAATCCCTCAGCCCCAGC...AAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR-3UTR CAA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACCCAGTCTCTTTGTTTTaGTCAGCTGCCTCTAGTTCT +
Preference number: 3 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYPVSLF*SAASSS
Trigger: AGAACTAGAGGCAGCTGACAAAAACAAAGAGACTGG...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR TCA 72 bp CACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTaGGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTC +
Preference number: 3 (lower is better)
Translates to: HSGKHVLSTGAN*VVGLKSFTVRL
Trigger: GAGTCTGACTGTGAAACTCTTTAACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR TCA 72 bp GGACTAGGAATCTTATCCAAATGTTCCTCTGAATGTTaGCTGGCTGGCTTTTTGGGACTAACCGATCTACCT +
Preference number: 3 (lower is better)
Translates to: GLGILSKCSSEC*LAGFLGLTDLP
Trigger: AGGTAGATCGGTTAGTCCCAAAAAGCCAGCCAGTCAACATTCAGAGGAACATTTGGATAAGATTCCTAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR TCA 72 bp CAACTGATTCTGCTTTGCATCTTTCCTGATGACGTCTaGTTTTTCCTTCCCATCTGGGATCTGCTCAGCATT +
Preference number: 3 (lower is better)
Translates to: QLILLCIFPDDV*FFLPIWDLLSI
Trigger: AATGCTGAGCAGATCCCAGATGGGAAGGAAAAATCAGACGTCATCAGGAAAGATGCAAAGCAGAATCAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
3UTR GCA 72 bp ACACAGGTTGTTTTTAAACACCCAAGCTTGTGCACCTaGTACCAGAAGAGTTGGTACTTGGACTGTGAAACT +
Preference number: 3 (lower is better)
Translates to: TQVVFKHPSLCT*YQKSWYLDCET
Trigger: AGTTTCACAGTCCAAGTACCAACTCTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTTAAAAACAACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR CCA 72 bp AAACACCCAAGCTTGTGCACCTGCTACCAGAAGAGTTaGTACTTGGACTGTGAAACTGGTTTCATGATTAAG +
Preference number: 3 (lower is better)
Translates to: KHPSLCTCYQKS*YLDCETGFMIK
Trigger: CTTAATCATGAAACCAGTTTCACAGTCCAAGTACCAACTCTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CAA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAACGGCCAGGGGGACAGTaGGTTCTTAGCAATCCTAAA +
Preference number: 3 (lower is better)
Translates to: AIEIINFQAKPNFFITVERPGGQ*VLSNPK
Trigger: TTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCG...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR CCA 72 bp CCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTaGGCATACCCTACACAGGTTGTTTTTAAACACCCA +
Preference number: 3 (lower is better)
Translates to: PVSTVYTFVLIC*AYPTQVVFKHP
Trigger: TGGGTGTTTAAAAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR GCA 72 bp GATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTaGTGGGCATACCCTACACAGGTTGTTTTTAAACAC +
Preference number: 3 (lower is better)
Translates to: DPVSTVYTFVLI*WAYPTQVVFKH
Trigger: GTGTTTAAAAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR TCA 72 bp ATTCTCAGAAGGTGCCTTTATTTATATAGATGCTACTaGATGCTGCTTCAGGGAACTGAAAAACCTGGATCT +
Preference number: 3 (lower is better)
Translates to: ILRRCLYLYRCY*MLLQGTEKPGS
Trigger: AGATCCAGGTTTTTCAGTTCCCTGAAGCAGCATTCAGTAGCATCTATATAAATAAAGGCACCTTCTGAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR-3UTR CAA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGGATACAGTAGATAACTaGGCACAAATACAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWDTVDN*AQIQSE
Trigger: CTCACTTTGTATTTGTGCCAAGTTATCTACTGTATC...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTGTCACTGCCGCCGGCTaGTCCCTGGGCTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGVTAAG*SLGSAP
Trigger: GGGCGCTGAGCCCAGGGACCAGCCGGCGGCAGTGAC...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR CCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTGCACATCGCCTGGGCTaGGCGCCTTGCCCGAGACGA +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGAHRLG*APCPRR
Trigger: TCGTCTCGGGCAAGGCGCCCAGCCCAGGCGATGTGC...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTATCGATCGTGGCCGCTaGGGAGCTGTAGCGCGGAGA +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGIDRGR*GAVARR
Trigger: TCTCCGCGCTACAGCTCCGCAGCGGCCACGATCGAT...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR CCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTATGGGCTCGCGGAAGTaGCGGATGACAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGMGSRK*RMTARV
Trigger: CACCCTGGCTGTCATCCGCCACTTCCGCGAGCCCAT...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTGCGGAGACCAACGCCTaGCCAAGCTGCCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGAETNA*PSCQET
Trigger: AGTTTCCTGGCAGCTTGGGCAGGCGTTGGTCTCCGC...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR CCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTTCGCGGGATCGATCGTaGCCGCTGCGGAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPSRDRS*PLRSCS
Trigger: GCTACAGCTCCGCAGCGGCCACGATCGATCCCGCGA...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR TCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTGTTGAAATGAAGGCCTaGGAGCTGTCGTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGVEMKA*ELSSSG
Trigger: ACCCGAGGACGACAGCTCTCAGGCCTTCATTTCAAC...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCCCTGTGACTGTCCCATaGGCCTGTGCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCPVTVP*ACAAGL
Trigger: CAGCCCTGCAGCACAGGCCCATGGGACAGTCACAGG...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR CAA 72 bp CTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTaGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LRAREGSRPGGQ*VLSNPKGPSCS
Trigger: GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTCAATTTTGGGGATCCTaGCCTGATAATGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGQFWGS*PDNARW
Trigger: CCACCGAGCATTATCAGGTCAGGATCCCCAAAATTG...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTGTTGAAATGAAGGCCTaGGAGCTGTCGTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPVEMKA*ELSSSG
Trigger: ACCCGAGGACGACAGCTCTCAGGCCTTCATTTCAAC...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGAGACGACGCAGCAGGTaGCCCCGCCGGGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRRRRSR*PRRAPR
Trigger: GCGAGGAGCCCGGCGGGGGCACCTGCTGCGTCGTCT...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTTGCAGGGCTGGGCTTTaGCTGGCTGAGTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPCRAGL*LAEFVP
Trigger: AGGAACAAACTCAGCCAGGCAAAGCCCAGCCCTGCA...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTGCAATTTTCCCATCCTaGGCTGCGGGACCATCTTTC +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPAIFPS*AAGPSF
Trigger: GAAAGATGGTCCCGCAGCTCAGGATGGGAAAATTGC...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTTTTGGCCTCAGCATTTaGTGGAGCTTTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGFGLSI*WSFASF
Trigger: GAAGGAAGCAAAGCTCCATCAAATGCTGAGGCCAAA...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTTACTGTGCCCATGACTaGTGGGTGGATCCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPYCAHD*WVDPSY
Trigger: GTAAGAGGGATCCACCCAGCAGTCATGGGCACAGTA...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTGACCTCTGCTTTTTCTaGACTGATCTTGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGDLCFF*TDLVQS
Trigger: GCTCTGGACAAGATCAGTGCAGAAAAAGCAGAGGTC...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTCCAGTTTTTGGGCAGTaGTTCCAGAGTCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGPVFGQ*FQSLIS
Trigger: AGAGATGAGACTCTGGAACCACTGCCCAAAAACTGG...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCCTGTCCCCAGGTATGTaGTTGGCCTGTGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCLSPGM*LACDCP
Trigger: GGGACAGTCACAGGCCAACCACATACCTGGGGACAG...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTTGTGCAAGGTGCTTGTaGTCTGACCAAGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGCARCL*SDQECL
Trigger: CAGACATTCTTGGTCAGACCACAAGCACCTTGCACA...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTTGTGCCCATGACTGCTaGGTGGATCCCTCTTACTCA +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPCAHDC*VDPSYS
Trigger: TGAGTAAGAGGGATCCACCCAGCAGTCATGGGCACA...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTACTCGGCCAATTTTATaGGGAATAACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGTRPIL*GITPGG
Trigger: ACCTCCAGGAGTTATTCCTCATAAAATTGGCCGAGT...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTCAGCAAGACGAAGGATaGACAGCCCCATGTTGTACT +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPQQDEG*TAPCCT
Trigger: AGTACAACATGGGGCTGTTCATCCTTCGTCTTGCTG...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTAACTGCTTTCCGGTTTaGACCTTCCAGTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGNCFPV*TFQSLC
Trigger: ACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTT...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAAGACGACGCAGCAGGTaGCCCCGCCGGGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTRRRSR*PRRAPR
Trigger: GCGAGGAGCCCGGCGGGGGCACCTGCTGCGTCGTCT...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCCTGGCTGGGACCTCTaGCCGGTTCAGGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRPGWDL*PVQAGR
Trigger: TCTCCCCGCCTGAACCGGGCAGAGGTCCCAGCCAGG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACCCTGGCTGGGACCTCTaGCCGGTTCAGGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDPGWDL*PVQAGR
Trigger: TCTCCCCGCCTGAACCGGGCAGAGGTCCCAGCCAGG...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAACGCGAGACGCCCCTTaGACGCCCCTCCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTTRDAP*TPLPAA
Trigger: CGCAGCCGGGAGGGGCGTCCAAGGGGCGTCTCGCGT...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR CCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTTCTCTCCAGCTCTACTaGATAACAACCAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGSLQLY*ITTKVL
Trigger: CAGAACCTTGGTTGTTATCCAGTAGAGCTGGAGAGA...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTCGCGGAAGTGGCGGATaGCAGCCAGGGTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: IWDLLSITARIACYSSTLRGSGG*QPGCPG
Trigger: ACCGGGACACCCTGGCTGTCATCCGCCACTTCCGCG...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR GCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACACTGGGCTGGGCGCCTTaGCCGAGACGACGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTLGWAP*PRRRSR
Trigger: CCTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAG...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTGCACCTACTGGAAACTaGTTTAGCACCTCTACCACT +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPAPTGN*FSTSTT
Trigger: AGTGGTAGAGGTGCTAAAGCAGTTTCCAGTAGGTGC...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTACCATCTTTCTCAGCTaGTCCCAGGGGAATAATAGC +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPTIFLS*SQGNNS
Trigger: GCTATTATTCCCCTGGGAGCAGCTGAGAAAGATGGT...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCCCATGGGCCTGTGCTaGAGGGCTGGGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRPMGLC*RAGLCL
Trigger: CAGGCAAAGCCCAGCCCTGCAGCACAGGCCCATGGG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTTTGATCAACTGGATCTaGCTGAAAAGGGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPLINWI*LKRAGF
Trigger: GAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAA...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTTACAATAACATCGCCTaGTGCAATTTTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGYNNIA*CNFPIL
Trigger: CAGGATGGGAAAATTGCACCAGGCGATGTTATTGTA...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTCAGAACCATTGCTCCTaGCTTAAAATCCTGAGGATT +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGQNHCS*LKILRI
Trigger: AATCCTCAGGATTTTAAGCCAGGAGCAATGGTTCTG...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTAGATCCATTCTGTGTTaGAATGAAGGCCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPRSILC*NEGLRA
Trigger: AGCTCTCAGGCCTTCATTTCAACACAGAATGGATCT...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACCTGGGCTGGGCGCCTTaGCCGAGACGACGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYLGWAP*PRRRSR
Trigger: CCTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAG...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTAATAACATCGCCTGGTaGAATTTTCCCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPNNIAW*NFPILS
Trigger: GCTCAGGATGGGAAAATTGCACCAGGCGATGTTATT...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGTGTCCCATGGGCCTGTaGTGCAGGGCTGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRCPMGL*CRAGLC
Trigger: GCAAAGCCCAGCCCTGCAGCACAGGCCCATGGGACA...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACACAGCAGCACATCGCCTaGGCTGGGCGCCTTGCCCGA +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTQQHIA*AGRLAR
Trigger: TCGGGCAAGGCGCCCAGCCCAGGCGATGTGCTGCTG...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTATTATAATCCACTCCTaGTACTTCTCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPIIIHS*YFSIPG
Trigger: CCCAGGGATGGAGAAGTACCAGGAGTGGATTATAAT...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCTGCCTGACGATGCCATaGATACTCTCTGCTCACTTG +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCCLTMP*ILSAHL
Trigger: CAAGTGAGCAGAGAGTATCCATGGCATCGTCAGGCA...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCCCTGATAATGCTCGGTaGAAAAGGCATAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCPDNAR*KRHRLR
Trigger: CCTCAGCCTATGCCTTTTCCACCGAGCATTATCAGG...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAGGGTGCAGGCCTGGCTaGGACCTCTGCCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTGCRPG*DLCPVQ
Trigger: CTGAACCGGGCAGAGGTCCCAGCCAGGCCTGCACCC...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCGGCCAGGGGGACAGTTaGTTCTTAGCAATCCTAAAG +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCGQGDS*FLAILK
Trigger: CTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCC...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACCGCGGAAGTGGCGGATaGCAGCCAGGGTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHRGSGG*QPGCPG
Trigger: ACCGGGACACCCTGGCTGTCATCCGCCACTTCCGCG...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTTGGTATTGTGGTCAATaGAGTAGATCATCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPWYCGQ*SRSSLC
Trigger: ACACAGGGATGATCTACTTCATTGACCACAATACCA...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCCATCTGATGGTCCATTaGGACCATCACCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCHLMVH*DHHQSK
Trigger: CTTTGACTGGTGATGGTCTCAATGGACCATCAGATG...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCTGTTCCTCTGAATGTTaGCTGGCTGGCTTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCCSSEC*LAGFLG
Trigger: TCCCAAAAAGCCAGCCAGTCAACATTCAGAGGAACA...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTATCTTCTGTTTTGTTTaGAACTACCTTCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MQLLPESEGGQPARGTVGIFCFV*NYLLFR
Trigger: CCTGAAGAGAAGGTAGTTTCAAACAAAACAGAAGAT...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCCTGCTCCAGAACCATTaGTCCTGGCTTAAAATCCTG +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCLLQNH*SWLKIL
Trigger: CAGGATTTTAAGCCAGGAGCAATGGTTCTGGAGCAG...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTTCTGATTGTGCCGACTaGCTACAACTGAAATTACTG +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPSDCAD*LQLKLL
Trigger: CAGTAATTTCAGTTGTAGGCAGTCGGCACAATCAGA...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTCTGAATGAGCTCAATTaGTCGAGTATGTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPLNELN*SSMCDS
Trigger: GGAATCACACATACTCGAGCAATTGAGCTCATTCAG...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCGACCTCTGCTTTTTCTaGACTGATCTTGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCDLCFF*TDLVQS
Trigger: GCTCTGGACAAGATCAGTGCAGAAAAAGCAGAGGTC...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTCAACTGATTCTGCTTTaGATCTTTCCTGATGACGTC +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPQLILL*IFPDDV
Trigger: GACGTCATCAGGAAAGATGCAAAGCAGAATCAGTTG...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTGATGCTACTGAATGCTaGTTCAGGGAACTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPDATEC*FRELKN
Trigger: GTTTTTCAGTTCCCTGAAGCAGCATTCAGTAGCATC...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCGAGGACTTGATCAACTaGATCTGGCTGAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCEDLIN*IWLKRA
Trigger: AGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTC...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACGGGTGCAGGCCTGGCTaGGACCTCTGCCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHGCRPG*DLCPVQ
Trigger: CTGAACCGGGCAGAGGTCCCAGCCAGGCCTGCACCC...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTCCTGTGACTGTCCCATaGGCCTGTGCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: IWDLLSITARIACYSSTLPVTVP*ACAAGL
Trigger: CAGCCCTGCAGCACAGGCCCATGGGACAGTCACAGG...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCTGGTTTCACAGTCTTaGGACGGATGGGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRLVSQS*DGWARG
Trigger: TCCGCGAGCCCATCCGTCTCAAGACTGTGAAACCAG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGAGGCTGGGAGCTGCCTaGCGATGCCATGGATACTCT +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRRLGAA*RCHGYS
Trigger: AGAGTATCCATGGCATCGTCAGGCAGCTCCCAGCCT...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCTTTGGCCTCAGCATTTaGTGGAGCTTTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSFGLSI*WSFASF
Trigger: GAAGGAAGCAAAGCTCCATCAAATGCTGAGGCCAAA...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTCCCATGGGCCTGTaGTGCAGGGCTGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTCPMGL*CRAGLC
Trigger: GCAAAGCCCAGCCCTGCAGCACAGGCCCATGGGACA...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACCTGTCCCCAGGTATGTaGTTGGCCTGTGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDLSPGM*LACDCP
Trigger: GGGACAGTCACAGGCCAACCACATACCTGGGGACAG...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCTTTGTCCTCATTTGCTaGGCATACCCTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCFVLIC*AYPTQV
Trigger: AACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAA...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTGGTTTACATACTGATTaGCAGGTACCAATTGAAACA +
Preference number: 4 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPGLHTD*QVPIET
Trigger: TGTTTCAATTGGTACCTGTCAATCAGTATGTAAACC...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGTTGTTACTGTGCCCATaGCTGCTGGGTGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRLLLCP*LLGGSL
Trigger: GAGGGATCCACCCAGCAGTCATGGGCACAGTAACAA...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACGCAGGGCGGGTCAGATaGGCATGTGGATGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYAGRVR*ACGCSS
Trigger: GGAGCTGCATCCACATGCTCATCTGACCCGCCCTGC...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGTTCGGGCGGGGTCACTaGCGCCGGCTGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKFGRGH*RRLVPG
Trigger: CCCAGGGACCAGCCGGCGGCAGTGACCCCGCCCGAA...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR GCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTGACACGGCGCACTCCTaGACCTTGCTGAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGDTAHS*TLLSQC
Trigger: GCACTGGCTCAGCAAGGTGCAGGAGTGCGCCGTGTC...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTCAGCAGCACATCGCCTaGGCTGGGCGCCTTGCCCGA +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLIQQHIA*AGRLAR
Trigger: TCGGGCAAGGCGCCCAGCCCAGGCGATGTGCTGCTG...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCACCTCTACCACTTaGAGATGTGTTAAATTCTGC +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCSTSTT*RCVKFC
Trigger: GCAGAATTTAACACATCTCCAAGTGGTAGAGGTGCT...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCTGCTTTTTCTGCACTaGTCTTGTCCAGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRLLFLH*SCPEPA
Trigger: GGCAGGCTCTGGACAAGATCAGTGCAGAAAAAGCAG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCGGCACAAATACAAAGTaGGTTGTGACCACATTGTTA +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCGTNTK*VVTTLL
Trigger: TAACAATGTGGTCACAACTCACTTTGTATTTGTGCC...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCTTATATAGATGCTACTaGATGCTGCTTCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCLYRCY*MLLQGT
Trigger: AGTTCCCTGAAGCAGCATTCAGTAGCATCTATATAA...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGACGACGCAGCAGGTaGCCCCGCCGGGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKRRRSR*PRRAPR
Trigger: GCGAGGAGCCCGGCGGGGGCACCTGCTGCGTCGTCT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTGTTCAGGCTGGGAGCTaGCTGACGATGCCATGGATA +
Preference number: 4 (lower is better)
Translates to: IWDLLSITARIACYSSTLVQAGS*LTMPWI
Trigger: TATCCATGGCATCGTCAGGCAGCTCCCAGCCTGAAC...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR GCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCTCTGATTGTGCCGACTaGCTACAACTGAAATTACTG +
Preference number: 4 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSSDCAD*LQLKLL
Trigger: CAGTAATTTCAGTTGTAGGCAGTCGGCACAATCAGA...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACTACTGTGCCCATGACTaGTGGGTGGATCCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDYCAHD*WVDPSY
Trigger: GTAAGAGGGATCCACCCAGCAGTCATGGGCACAGTA...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAACGCGAGACGCCCCTTaGACGCCCCTCCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKTRDAP*TPLPAA
Trigger: CGCAGCCGGGAGGGGCGTCCAAGGGGCGTCTCGCGT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000369617.8
CDS-3UTR CCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCAGCACCTCTACCACTTaGAGATGTGTTAAATTCTGC +
Preference number: 4 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSSTSTT*RCVKFC
Trigger: GCAGAATTTAACACATCTCCAAGTGGTAGAGGTGCT...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCTATCAAGCCAGTTCCTaGCCTCAAAAGAAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSYQASS*PQKKKN
Trigger: GTTCTTCTTCTTTTGAGGCCAGGAACTGGCTTGATA...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCAGTAGAGATTATCTCTaGTCACTTGCTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSSRDYL*SLAAVC
Trigger: ACAAACTGCAGCAAGTGATCAGAGATAATCTCTACT...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCTTGACAGGTACCAATTaGAACATCTGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSLTGTN*NIWTTS
Trigger: AGATGTTGTCCAGATGTTTCAATTGGTACCTGTCAA...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCAATTTTGGGGATCCTaGCCTGATAATGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRQFWGS*PDNARW
Trigger: CCACCGAGCATTATCAGGTCAGGATCCCCAAAATTG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCAGCAAGACGAAGGATaGACAGCCCCATGTTGTACT +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRQQDEG*TAPCCT
Trigger: AGTACAACATGGGGCTGTTCATCCTTCGTCTTGCTG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCGCCTTTTCACATATCTaGACTCTCAAAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCAFSHI*TLKDSS
Trigger: TGAAGAATCTTTGAGAGTTCAGATATGTGAAAAGGC...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATGATGCAGCTCCTTCCTaGGAGCGAGGGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNDAAPS*ERGRAA
Trigger: GGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCATC...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCTGGGCTGGGCGCCTTaGCCGAGACGACGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLGWAP*PRRRSR
Trigger: CCTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACCATCTGGACAACATCTaGATGAGTGTGACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDHLDNI*MSVTED
Trigger: GTCCTCGGTCACACTCATGCAGATGTTGTCCAGATG...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACTCAGGCTGTGCAAGGTaGTTGTGGTCTGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDSGCAR*LWSDQE
Trigger: TTCTTGGTCAGACCACAAGCACCTTGCACAGCCTGA...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTGTCACTAGTTCAGGCTaGGAGCTGCCTGACGATGCC +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFVTSSG*ELPDDA
Trigger: GGCATCGTCAGGCAGCTCCCAGCCTGAACTAGTGAC...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCGCGGAAGTGGCGGATaGCAGCCAGGGTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPRGSGG*QPGCPG
Trigger: ACCGGGACACCCTGGCTGTCATCCGCCACTTCCGCG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTCTCCTCCTAGCACCCTaGAGCCAAACCCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFLLLAP*SQTLTL
Trigger: AAGAGTCAGGGTTTGGCTTCAGGGTGCTAGGAGGAG...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGGAGCAGCAGTTGTCATaGGGTCCAAGACTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSREQQLS*GPRLVC
Trigger: ACAAACAAGTCTTGGACCTCATGACAACTGCTGCTC...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACACCGACTGCCTACAACTaGAATTACTGCGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTPTAYN*NYCGVR
Trigger: CCTGACACCGCAGTAATTTCAGTTGTAGGCAGTCGG...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACACTGGGGCTGAGGGATTaGTCTCTGGGTCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTLGLRD*SLGLLL
Trigger: CAAAAGAAGACCCAGAGATCAATCCCTCAGCCCCAG...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACAGCCTGCCCTGGTGCTaGCCTGACAACTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDSLPWC*PDNFYF
Trigger: AAAATAAAAGTTGTCAGGTCAGCACCAGGGCAGGCT...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATGACACGGCGCACTCCTaGACCTTGCTGAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNDTAHS*TLLSQC
Trigger: GCACTGGCTCAGCAAGGTGCAGGAGTGCGCCGTGTC...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCCCGATTTTCCATTCTaGTCCAGAACCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRPDFPF*SRTIAP
Trigger: AGGAGCAATGGTTCTGGAGCAGAATGGAAAATCGGG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTGTTCAGGCTGGGAGCTaGCTGACGATGCCATGGATA +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFVQAGS*LTMPWI
Trigger: TATCCATGGCATCGTCAGGCAGCTCCCAGCCTGAAC...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCTGGCTGGGACCTCTaGCCGGTTCAGGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPGWDL*PVQAGR
Trigger: TCTCCCCGCCTGAACCGGGCAGAGGTCCCAGCCAGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCTGGCTGGGACCTCTaGCCGGTTCAGGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKPGWDL*PVQAGR
Trigger: TCTCCCCGCCTGAACCGGGCAGAGGTCCCAGCCAGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGCCCATGGGCCTGTGCTaGAGGGCTGGGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWPMGLC*RAGLCL
Trigger: CAGGCAAAGCCCAGCCCTGCAGCACAGGCCCATGGG...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACATCTTGTCCAGAGCCTaGCCTGGTGCTGACCTGACA +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYILSRA*PGADLT
Trigger: TGTCAGGTCAGCACCAGGGCAGGCTCTGGACAAGAT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTTGGCCGACCGACCTCTaGTTTTTCTGCACTGATCTT +
Preference number: 4 (lower is better)
Translates to: IWDLLSITARIACYSSTLWPTDL*FFCTDL
Trigger: AAGATCAGTGCAGAAAAAGCAGAGGTCGGTCGGCCA...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATAACGGGAAAAATCCGTaGGGGGCGCGCAGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNNGKNP*GARRSA
Trigger: CGCGCTTCTGCGCGCCCCCCACGGATTTTTCCCGTT...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGCACATCGCCTGGGCTaGGCGCCTTGCCCGAGACGA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKAHRLG*APCPRR
Trigger: TCGTCTCGGGCAAGGCGCCCAGCCCAGGCGATGTGC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGCACATCGCCTGGGCTaGGCGCCTTGCCCGAGACGA +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPAHRLG*APCPRR
Trigger: TCGTCTCGGGCAAGGCGCCCAGCCCAGGCGATGTGC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCAGCAGCACATCGCCTaGGCTGGGCGCCTTGCCCGA +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPQQHIA*AGRLAR
Trigger: TCGGGCAAGGCGCCCAGCCCAGGCGATGTGCTGCTG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTAGGGCTGGGTTCTGCTaGAGGCTTGGGAGTTCCATA +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGRAGFC*RLGSSI
Trigger: TATGGAACTCCCAAGCCTCCAGCAGAACCCAGCCCT...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACAGGGCTGGGTTCTGCTaGAGGCTTGGGAGTTCCATA +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHRAGFC*RLGSSI
Trigger: TATGGAACTCCCAAGCCTCCAGCAGAACCCAGCCCT...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACGAGGACTTGATCAACTaGATCTGGCTGAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDEDLIN*IWLKRA
Trigger: AGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTC...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACGAGGATCCAACCAGGTaGTTGTCTTGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDEDPTR*LSWYCG
Trigger: ACCACAATACCAAGACAACCACCTGGTTGGATCCTC...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGGGTGCAGGCCTGGCTaGGACCTCTGCCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKGCRPG*DLCPVQ
Trigger: CTGAACCGGGCAGAGGTCCCAGCCAGGCCTGCACCC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGGGTGCAGGCCTGGCTaGGACCTCTGCCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPGCRPG*DLCPVQ
Trigger: CTGAACCGGGCAGAGGTCCCAGCCAGGCCTGCACCC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACGGGCTGGGCTTTGCCTaGCTGAGTTTGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYGLGFA*LSLFLM
Trigger: CATCAGGAACAAACTCAGCCAGGCAAAGCCCAGCCC...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCAGATTCTTCAATTACTaGCACGTGAGACTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSRFFNY*HVRLFK
Trigger: TTTGAAGAGTCTCACGTGCCAGTAATTGAAGAATCT...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTCATCTGATGGTCCATTaGGACCATCACCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: IWDLLSITARIACYSSTLHLMVH*DHHQSK
Trigger: CTTTGACTGGTGATGGTCTCAATGGACCATCAGATG...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACACCTGATGGTGGACCATaGTGCTCTTCTTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTPDGGP*CSSSAM
Trigger: CATTGCTGAAGAAGAGCATCATGGTCCACCATCAGG...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCCGACTGCCTACAACTaGAATTACTGCGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGPTAYN*NYCGVR
Trigger: CCTGACACCGCAGTAATTTCAGTTGTAGGCAGTCGG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCTGGGGCTGAGGGATTaGTCTCTGGGTCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGLGLRD*SLGLLL
Trigger: CAAAAGAAGACCCAGAGATCAATCCCTCAGCCCCAG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTCTGCTTTTTCTGCACTaGTCTTGTCCAGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFLLFLH*SCPEPA
Trigger: GGCAGGCTCTGGACAAGATCAGTGCAGAAAAAGCAG...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACTTTCCTGATGACGTCTaGTTTTTCCTTCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDFPDDV*FFLPIW
Trigger: CCAGATGGGAAGGAAAAATCAGACGTCATCAGGAAA...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAACCTTGCTGAGCCAGTaGTTCTTCTTCTTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTTLLSQ*FFFFSV
Trigger: GACGCTGAAGAAGAAGAAGCACTGGCTCAGCAAGGT...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCCATGGGCCTGTGCTaGAGGGCTGGGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKPMGLC*RAGLCL
Trigger: CAGGCAAAGCCCAGCCCTGCAGCACAGGCCCATGGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGATGGGCTCGCGGAAGTaGCGGATGACAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKMGSRK*RMTARV
Trigger: CACCCTGGCTGTCATCCGCCACTTCCGCGAGCCCAT...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTCTGGCTGAAAAGGGCTaGGTTCTGCTGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLILAEKG*VLLEAW
Trigger: CCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAG...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CCA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTCCAGTTTTTGGGCAGTaGTTCCAGAGTCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: IWDLLSITARIACYSSTLPVFGQ*FQSLIS
Trigger: AGAGATGAGACTCTGGAACCACTGCCCAAAAACTGG...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACAGGACACCTTTAAGCTaGGATGGATCTCTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDRTPLS*DGSLVK
Trigger: CTTCACAAGAGATCCATCCCAGCTTAAAGGTGTCCT...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGTCTCTCCAGCTCTACTaGATAACAACCAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRSLQLY*ITTKVL
Trigger: CAGAACCTTGGTTGTTATCCAGTAGAGCTGGAGAGA...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACTGTGCCCATGACTGCTaGGTGGATCCCTCTTACTCA +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHCAHDC*VDPSYS
Trigger: TGAGTAAGAGGGATCCACCCAGCAGTCATGGGCACA...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACGGTCAGATGAGCATGTaGATGCAGCTCCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHGQMSM*MQLLPE
Trigger: CTCAGGAAGGAGCTGCATCCACATGCTCATCTGACC...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACCACCGCGGGTTAGGCTaGAGAAAGGAAAAGGGAATT +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYHRGLG*RKEKGI
Trigger: AATTCCCTTTTCCTTTCTTCAGCCTAACCCGCGGTG...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGTTCTTTCCATCTTGCTaGCAGATGTCGTTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRFFPSC*QMSFVF
Trigger: GAAAACGAACGACATCTGTCAGCAAGATGGAAAGAA...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACACTTCATCCAGTCAGATaGCTCAGAATGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTLHPVR*LRMPLS
Trigger: AGAGAGAGGCATTCTGAGTCATCTGACTGGATGAAG...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACCTGCTCACTTGCATCTaGTGGTCCATTGAGACCATC +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYLLTCI*WSIETI
Trigger: GATGGTCTCAATGGACCATCAGATGCAAGTGAGCAG...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATAGGCTGGGAGCTGCCTaGCGATGCCATGGATACTCT +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNRLGAA*RCHGYS
Trigger: AGAGTATCCATGGCATCGTCAGGCAGCTCCCAGCCT...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGATCTGGTCACCAACATaGATTCTGCCATCTTTGATG +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRIWSPT*ILPSLM
Trigger: CATCAAAGATGGCAGAATTCATGTTGGTGACCAGAT...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTTTGTTACTGTGCCCATaGCTGCTGGGTGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLILLLCP*LLGGSL
Trigger: GAGGGATCCACCCAGCAGTCATGGGCACAGTAACAA...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTTCCTCTGAATGTTaGCTGGCTGGCTTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTCSSEC*LAGFLG
Trigger: TCCCAAAAAGCCAGCCAGTCAACATTCAGAGGAACA...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGACACGGCGCACTCCTaGACCTTGCTGAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPDTAHS*TLLSQC
Trigger: GCACTGGCTCAGCAAGGTGCAGGAGTGCGCCGTGTC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGACACGGCGCACTCCTaGACCTTGCTGAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKDTAHS*TLLSQC
Trigger: GCACTGGCTCAGCAAGGTGCAGGAGTGCGCCGTGTC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCCTCTCTCTGTTTTCTaGGTTTCCACTGCCATTAAT +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRPLSVF*VSTAIN
Trigger: ATTAATGGCAGTGGAAACGCAGAAAACAGAGAGAGG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACCATCTGGACAACATCTaGATGAGTGTGACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHHLDNI*MSVTED
Trigger: GTCCTCGGTCACACTCATGCAGATGTTGTCCAGATG...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACAGTTCAACAATGGACTaGCCATTCACTGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDSSTMD*PFTAEI
Trigger: TATCTCTGCAGTGAATGGGCAGTCCATTGTTGAACT...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGTCCCATGGGCCTGTaGTGCAGGGCTGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPCPMGL*CRAGLC
Trigger: GCAAAGCCCAGCCCTGCAGCACAGGCCCATGGGACA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACTCAGGCTGTGCAAGGTaGTTGTGGTCTGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHSGCAR*LWSDQE
Trigger: TTCTTGGTCAGACCACAAGCACCTTGCACAGCCTGA...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCCTAAAGGCCCTTCATaGAGCCTAGGTAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGPKGPS*SLGNLR
Trigger: CCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTCCTAAAGGCCCTTCATaGAGCCTAGGTAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFPKGPS*SLGNLR
Trigger: CCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGG...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCCAAGCTTGTGCACCTaGTACCAGAAGAGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGPSLCT*YQKSWY
Trigger: GTACCAACTCTTCTGGTAGCAGGTGCACAAGCTTGG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACCCAAGCTTGTGCACCTaGTACCAGAAGAGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHPSLCT*YQKSWY
Trigger: GTACCAACTCTTCTGGTAGCAGGTGCACAAGCTTGG...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCATGGGCTCGCGGAAGTaGCGGATGACAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPMGSRK*RMTARV
Trigger: CACCCTGGCTGTCATCCGCCACTTCCGCGAGCCCAT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAATGGGCTCGCGGAAGTaGCGGATGACAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKMGSRK*RMTARV
Trigger: CACCCTGGCTGTCATCCGCCACTTCCGCGAGCCCAT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACCCTGATAATGCTCGGTaGAAAAGGCATAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYPDNAR*KRHRLR
Trigger: CCTCAGCCTATGCCTTTTCCACCGAGCATTATCAGG...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACAATAACTCCTGGAGGTaGTTTGTTTTTGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDNNSWR*FVFGGE
Trigger: CTCACCTCCAAAAACAAACCACCTCCAGGAGTTATT...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCTGTGACTGTCCCATaGGCCTGTGCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKPVTVP*ACAAGL
Trigger: CAGCCCTGCAGCACAGGCCCATGGGACAGTCACAGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGTGCTACCAGAAGAGTTaGTACTTGGACTGTGAAACT +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRCYQKS*YLDCET
Trigger: AGTTTCACAGTCCAAGTACCAACTCTTCTGGTAGCA...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAGAAGGAGCCAAACCATaGTCAGGTATCAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTEGAKP*SGIKPV
Trigger: AACTGGCTTGATACCTGACCATGGTTTGGCTCCTTC...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAACTGGTTTCACAGTCTTaGGACGGATGGGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVELVSQS*DGWARG
Trigger: TCCGCGAGCCCATCCGTCTCAAGACTGTGAAACCAG...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCTTCATCCAGTCAGATaGCTCAGAATGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGLHPVR*LRMPLS
Trigger: AGAGAGAGGCATTCTGAGTCATCTGACTGGATGAAG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGTTCCATATCTGGTTTTaGAGACCCAATTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRFHIWF*RPNFNL
Trigger: CAGGTTGAAATTGGGTCTTCAAAACCAGATATGGAA...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACTTGACAGGTACCAATTaGAACATCTGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDLTGTN*NIWTTS
Trigger: AGATGTTGTCCAGATGTTTCAATTGGTACCTGTCAA...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCATTCTGTGTTGAAATaGAGGCCTGAGAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGHSVLK*RPESCR
Trigger: ACGACAGCTCTCAGGCCTTCATTTCAACACAGAATG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGTATGTGGTTGGCCTGTaGCTGTCCCATGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWYVVGL*LSHGPV
Trigger: CACAGGCCCATGGGACAGTCACAGGCCAACCACATA...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTGAATTCTGCCATCTTTaGTGGCAGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFEFCHL*WQDHLQ
Trigger: CTGAAGATGGTCCTGCCATCAAAGATGGCAGAATTC...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTGAATTCTGCCATCTTTaGTGGCAGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGEFCHL*WQDHLQ
Trigger: CTGAAGATGGTCCTGCCATCAAAGATGGCAGAATTC...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTTTTCCCATCCTGAGCTaGGGGACCATCTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLIFPILS*GTIFQH
Trigger: GTGCTGAAAGATGGTCCCGCAGCTCAGGATGGGAAA...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR GCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACACCATCTTTCTCAGCTaGTCCCAGGGGAATAATAGC +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHTIFLS*SQGNNS
Trigger: GCTATTATTCCCCTGGGAGCAGCTGAGAAAGATGGT...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATTGCAGGGCTGGGCTTTaGCTGGCTGAGTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNCRAGL*LAEFVP
Trigger: AGGAACAAACTCAGCCAGGCAAAGCCCAGCCCTGCA...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTACTGCCCGTATAGCCTaGTATTCTTCGACTCTTACC +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFTARIA*YSSTLT
Trigger: GGTAAGAGTCGAAGAATAGCAGGCTATACGGGCAGT...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTTCTGCTCAGCATTACTaGCCGTATAGCCTGCTATTC +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGSAQHY*PYSLLF
Trigger: GAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGA...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACTATACTAAAGGTTACTaGCGTTTCTCAGCCATACCA +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDYTKGY*RFSAIP
Trigger: TGGTATGGCTGAGAAACGGCAGTAACCTTTAGTATA...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTAAACACCCAAGCTTGTaGACCTGCTACCAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGKHPSL*TCYQKS
Trigger: ACTCTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTT...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTGGCCCTTGTAGTGCATaGAATGGTTCTCAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFGPCSA*NGSQVE
Trigger: CTCTACTTGAGAACCATTCCATGCACTACAAGGGCC...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACGTTCTGCTGGAGGCTTaGGAGTTCCATAGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYVLLEA*EFHRSF
Trigger: GAAACTTCTATGGAACTCCCAAGCCTCCAGCAGAAC...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGCTGGCTGAAAAGGGCTaGGTTCTGCTGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWLAEKG*VLLEAW
Trigger: CCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAG...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACGAGGATCCAACCAGGTaGTTGTCTTGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHEDPTR*LSWYCG
Trigger: ACCACAATACCAAGACAACCACCTGGTTGGATCCTC...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAGTCACTAGTTCAGGCTaGGAGCTGCCTGACGATGCC +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEVTSSG*ELPDDA
Trigger: GGCATCGTCAGGCAGCTCCCAGCCTGAACTAGTGAC...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTGAGACAGTTCAACAATaGACTGCCCATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGETVQQ*TAHSLQ
Trigger: CTGCAGTGAATGGGCAGTCCATTGTTGAACTGTCTC...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACTGTGCAAGGTGCTTGTaGTCTGACCAAGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHCARCL*SDQECL
Trigger: CAGACATTCTTGGTCAGACCACAAGCACCTTGCACA...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACAGAAGAGTTGGTACTTaGACTGTGAAACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDRRVGT*TVKLVS
Trigger: TGAAACCAGTTTCACAGTCCAAGTACCAACTCTTCT...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACATTTGTCCTCATTTGCTaGGCATACCCTACACAGGTT +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTFVLIC*AYPTQV
Trigger: AACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAA...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACTGGTTTCACAGTCTTaGGACGGATGGGCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKLVSQS*DGWARG
Trigger: TCCGCGAGCCCATCCGTCTCAAGACTGTGAAACCAG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACGGTTTACATACTGATTaGCAGGTACCAATTGAAACA +
Preference number: 4 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDGLHTD*QVPIET
Trigger: TGTTTCAATTGGTACCTGTCAATCAGTATGTAAACC...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTCCTGGCTTAAAATCCTaGGGATTCATGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFPGLKS*GFMQVS
Trigger: AGAGACTTGCATGAATCCTCAGGATTTTAAGCCAGG...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGGCTGGGAGCTGCCTaGCGATGCCATGGATACTCT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKRLGAA*RCHGYS
Trigger: AGAGTATCCATGGCATCGTCAGGCAGCTCCCAGCCT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAGGCTGGGAGCTGCCTaGCGATGCCATGGATACTCT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPRLGAA*RCHGYS
Trigger: AGAGTATCCATGGCATCGTCAGGCAGCTCCCAGCCT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAACTCCTCCTAGCACCCTaGAGCCAAACCCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVELLLAP*SQTLTL
Trigger: AAGAGTCAGGGTTTGGCTTCAGGGTGCTAGGAGGAG...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACTCGGCCAATTTTATaGGGAATAACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYTRPIL*GITPGG
Trigger: ACCTCCAGGAGTTATTCCTCATAAAATTGGCCGAGT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTCCTGATGGTGGACCATaGTGCTCTTCTTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLIPDGGP*CSSSAM
Trigger: CATTGCTGAAGAAGAGCATCATGGTCCACCATCAGG...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATATGTGGTTGGCCTGTaGCTGTCCCATGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKYVVGL*LSHGPV
Trigger: CACAGGCCCATGGGACAGTCACAGGCCAACCACATA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTATGTGGTTGGCCTGTaGCTGTCCCATGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPYVVGL*LSHGPV
Trigger: CACAGGCCCATGGGACAGTCACAGGCCAACCACATA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTTTATTTCCACCAGCCTaGATGAGCTCAATTGCTCGA +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGLFPPA*MSSIAR
Trigger: TCGAGCAATTGAGCTCATTCAGGCTGGTGGAAATAA...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACAACTGCTTTCCGGTTTaGACCTTCCAGTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHNCFPV*TFQSLC
Trigger: ACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTT...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGATAAAAAGGGTGACCTaGGATGCTGTAAGTATACAT +
Preference number: 4 (lower is better)
Translates to: TYVICSDTHEDELGSLSRIKRVT*DAVSIH
Trigger: ATGTATACTTACAGCATCTCAGGTCACCCTTTTTAT...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTTGCTTCACAACAAGATaGACCCAGGTGACAGAACAA +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGCFTTR*TQVTEQ
Trigger: TTGTTCTGTCACCTGGGTTCATCTTGTTGTGAAGCA...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTTCAGATGACTCAGAATaGCTCTCTCTGTTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGSDDSE*LSLFSA
Trigger: CGCAGAAAACAGAGAGAGGCATTCTGAGTCATCTGA...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTAATAACATCGCCTGGTaGAATTTTCCCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFNNIAW*NFPILS
Trigger: GCTCAGGATGGGAAAATTGCACCAGGCGATGTTATT...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAATCTTGTCCAGAGCCTaGCCTGGTGCTGACCTGACA +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEILSRA*PGADLT
Trigger: TGTCAGGTCAGCACCAGGGCAGGCTCTGGACAAGAT...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACATTTGTCCTCATTTaGTGGGCATACCCTACACAG +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYTFVLI*WAYPTQ
Trigger: CTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACATTATAATCCACTCCTaGTACTTCTCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYIIIHS*YFSIPG
Trigger: CCCAGGGATGGAGAAGTACCAGGAGTGGATTATAAT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCTGGCTGAAAAGGGCTaGGTTCTGCTGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLAEKG*VLLEAW
Trigger: CCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACTGGCTGAAAAGGGCTaGGTTCTGCTGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKLAEKG*VLLEAW
Trigger: CCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGTCACTAGTTCAGGCTaGGAGCTGCCTGACGATGCC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKVTSSG*ELPDDA
Trigger: GGCATCGTCAGGCAGCTCCCAGCCTGAACTAGTGAC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGGGGCTGGGCTTTGCCTaGCTGAGTTTGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKGLGFA*LSLFLM
Trigger: CATCAGGAACAAACTCAGCCAGGCAAAGCCCAGCCC...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCTGTCCCCAGGTATGTaGTTGGCCTGTGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLSPGM*LACDCP
Trigger: GGGACAGTCACAGGCCAACCACATACCTGGGGACAG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTACTGTTCAACGGAAATaGAATTATAATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: IWDLLSITARIACYSSTLTVQRK*NYNPLL
Trigger: CAGGAGTGGATTATAATTTCATTTCCGTTGAACAGT...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAGCAATTTTCCCATCCTaGGCTGCGGGACCATCTTTC +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEAIFPS*AAGPSF
Trigger: GAAAGATGGTCCCGCAGCTCAGGATGGGAAAATTGC...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATCTGCTCACTTGCATCTaGTGGTCCATTGAGACCATC +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNLLTCI*WSIETI
Trigger: GATGGTCTCAATGGACCATCAGATGCAAGTGAGCAG...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACTCCTCCTAGCACCCTaGAGCCAAACCCTGACTCTT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKLLLAP*SQTLTL
Trigger: AAGAGTCAGGGTTTGGCTTCAGGGTGCTAGGAGGAG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGTTGAAATGAAGGCCTaGGAGCTGTCGTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKVEMKA*ELSSSG
Trigger: ACCCGAGGACGACAGCTCTCAGGCCTTCATTTCAAC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACCATGCAACATGCTATTaGGATCATCAACTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYHATCY*DHQLPS
Trigger: GCTTGGAAGTTGATGATCTCAATAGCATGTTGCATG...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTTCTACAGGGGCTAATTaGGTTGTTGGGTTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGSTGAN*VVGLKS
Trigger: ACTCTTTAACCCAACAACTCAATTAGCCCCTGTAGA...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGTTTCCCATCCTGAGCTaGGGGACCATCTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWFPILS*GTIFQH
Trigger: GTGCTGAAAGATGGTCCCGCAGCTCAGGATGGGAAA...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGTTCAGGCTGGGAGCTaGCTGACGATGCCATGGATA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKVQAGS*LTMPWI
Trigger: TATCCATGGCATCGTCAGGCAGCTCCCAGCCTGAAC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTGCACCTACTGGAAACTaGTTTAGCACCTCTACCACT +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLIAPTGN*FSTSTT
Trigger: AGTGGTAGAGGTGCTAAAGCAGTTTCCAGTAGGTGC...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATGCAGGGCTGGGCTTTaGCTGGCTGAGTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKCRAGL*LAEFVP
Trigger: AGGAACAAACTCAGCCAGGCAAAGCCCAGCCCTGCA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTACTGCCCGTATAGCCTaGTATTCTTCGACTCTTACC +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLITARIA*YSSTLT
Trigger: GGTAAGAGTCGAAGAATAGCAGGCTATACGGGCAGT...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR GCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTGATGCTACTGAATGCTaGTTCAGGGAACTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFDATEC*FRELKN
Trigger: GTTTTTCAGTTCCCTGAAGCAGCATTCAGTAGCATC...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCGAGATCATGCCATTaGACTCCAGCTTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKPRSCH*TPAWAT
Trigger: TGTCGCCCAAGCTGGAGTGCAATGGCATGATCTCGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGGGCTGGGTTCTGCTaGAGGCTTGGGAGTTCCATA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKRAGFC*RLGSSI
Trigger: TATGGAACTCCCAAGCCTCCAGCAGAACCCAGCCCT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTCCAATATATATAGACTaGTCAGGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFPIYID*SGPSPP
Trigger: AGGAGGAGATGGACCTGACCAGTCTATATATATTGG...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTGAGACAGTTCAACAATaGACTGCCCATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLIETVQQ*TAHSLQ
Trigger: CTGCAGTGAATGGGCAGTCCATTGTTGAACTGTCTC...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGGGCTGGGCTTTGCCTaGCTGAGTTTGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPGLGFA*LSLFLM
Trigger: CATCAGGAACAAACTCAGCCAGGCAAAGCCCAGCCC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTAGTATACATCGAGGTTaGATAACACAGCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFSIHRG*ITQQEM
Trigger: CATCTCCTGCTGTGTTATCCAACCTCGATGTATACT...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR CAA 72 bp AAGGGTGACCTGAGATGCTGTAAGTATACATCGAGGTaGGATAACACAGCAGGAGATGAACTCTATTGCTTA +
Preference number: 4 (lower is better)
Translates to: KGDLRCCKYTSR*DNTAGDELYCL
Trigger: TAAGCAATAGAGTTCATCTCCTGCTGTGTTATCCAACCTCGATGTATACTTACAGCATCTCAGGTCACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
3UTR CAA 72 bp ATCAGTGTTTTCTTAACTGGAGAACTGCTTTCCGGTTaGAACCTTCCAGTCTCTTTGTTTTTGTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ISVFLTGELLSG*NLPVSLFLSAA
Trigger: GGCAGCTGACAAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAAACACTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACAGTAGAGATTATCTCTaGTCACTTGCTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYSRDYL*SLAAVC
Trigger: ACAAACTGCAGCAAGTGATCAGAGATAATCTCTACT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGCAATTTTCCCATCCTaGGCTGCGGGACCATCTTTC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPAIFPS*AAGPSF
Trigger: GAAAGATGGTCCCGCAGCTCAGGATGGGAAAATTGC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTTCTTAACTGGAGAACTGCTTTCCGGTTTGAACCTTCCAGTCTCTTTGTTTTTCATTCTGTGTTGAAATaGAGGCCTGAGAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: FLNWRTAFRFEPSSLFVFHSVLK*RPESCR
Trigger: ACGACAGCTCTCAGGCCTTCATTTCAACACAGAATG...AAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTAGATCCATTCTGTGTTaGAATGAAGGCCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLIRSILC*NEGLRA
Trigger: AGCTCTCAGGCCTTCATTTCAACACAGAATGGATCT...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp TTTCTTAACTGGAGAACTGCTTTCCGGTTTGAACCTTCCAGTCTCTTTGTTTTTCCGGACTTCCTTCTATaGCTCGGCCAATTTTATGAG +
Preference number: 4 (lower is better)
Translates to: FLNWRTAFRFEPSSLFVFPDFLL*LGQFYE
Trigger: CTCATAAAATTGGCCGAGTCATAGAAGGAAGTCCGG...AAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCGACTGCCTACAACTaGAATTACTGCGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKPTAYN*NYCGVR
Trigger: CCTGACACCGCAGTAATTTCAGTTGTAGGCAGTCGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATTTCCACCAGCCTGAATaGGCTCAATTGCTCGAGTAT +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNFHQPE*AQLLEY
Trigger: ATACTCGAGCAATTGAGCTCATTCAGGCTGGTGGAA...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTTCAATTACTGGCACGTaGGACTCTTCAAATATGGAA +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFSITGT*DSSNME
Trigger: TTCCATATTTGAAGAGTCTCACGTGCCAGTAATTGA...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACTCAATTACTGGCACGTaGGACTCTTCAAATATGGAA +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHSITGT*DSSNME
Trigger: TTCCATATTTGAAGAGTCTCACGTGCCAGTAATTGA...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAGCCTTTTCACATATCTaGACTCTCAAAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTAFSHI*TLKDSS
Trigger: TGAAGAATCTTTGAGAGTTCAGATATGTGAAAAGGC...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTGGCACAAATACAAAGTaGGTTGTGACCACATTGTTA +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFGTNTK*VVTTLL
Trigger: TAACAATGTGGTCACAACTCACTTTGTATTTGTGCC...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACTCTCTGATCACTTGCTaGAGTTTGTGGTCAATTGAT +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHSLITC*SLWSID
Trigger: ATCAATTGACCACAAACTGCAGCAAGTGATCAGAGA...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACTCTCTGATCACTTGCTaGAGTTTGTGGTCAATTGAT +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYSLITC*SLWSID
Trigger: ATCAATTGACCACAAACTGCAGCAAGTGATCAGAGA...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTTCCCATCCTGAGCTaGGGGACCATCTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPFPILS*GTIFQH
Trigger: GTGCTGAAAGATGGTCCCGCAGCTCAGGATGGGAAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCAGGAATTCCATCAATaGACATTAGTTCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGQEFHQ*TLVHQL
Trigger: CAGCTGATGAACTAATGTGCATTGATGGAATTCCTG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACCAGGAATTCCATCAATaGACATTAGTTCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: TTAIFNDELTVSSSARTHQEFHQ*TLVHQL
Trigger: CAGCTGATGAACTAATGTGCATTGATGGAATTCCTG...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGTGGCCGACCGACCTCTaGTTTTTCTGCACTGATCTT +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWWPTDL*FFCTDL
Trigger: AAGATCAGTGCAGAAAAAGCAGAGGTCGGTCGGCCA...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGTGAGCCGAGATCATaGCATTGCACTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKSEPRS*HCTPAW
Trigger: CCAAGCTGGAGTGCAATGGCATGATCTCGGCTCACT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369617.8
CDS-3UTR CCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACATTAATGACTTTGCCTaGTTTCACAGTCTTGAGACG +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYINDFA*FHSLET
Trigger: CGTCTCAAGACTGTGAAACCAGGCAAAGTCATTAAT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATGGCCCTTGTAGTGCATaGAATGGTTCTCAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNGPCSA*NGSQVE
Trigger: CTCTACTTGAGAACCATTCCATGCACTACAAGGGCC...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTTGTTTGGTTGTAACTTaGAACAGTCTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFCLVVT*NSLHPV
Trigger: GACTGGATGAAGACTGTTCCAAGTTACAACCAAACA...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATCCATTTCCCAGTTTTTaGGCAGTGGTTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNPFPSF*AVVPES
Trigger: AGACTCTGGAACCACTGCCCAAAAACTGGGAAATGG...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGTGCCTGACGATGCCATaGATACTCTCTGCTCACTTG +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWCLTMP*ILSAHL
Trigger: CAAGTGAGCAGAGAGTATCCATGGCATCGTCAGGCA...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAGGCCAGGGGGACAGTTaGTTCTTAGCAATCCTAAAG +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEGQGDS*FLAILK
Trigger: CTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCC...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACACCGCGGGTTAGGCTaGAGAAAGGAAAAGGGAATT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKHRGLG*RKEKGI
Trigger: AATTCCCTTTTCCTTTCTTCAGCCTAACCCGCGGTG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCTGCTCACTTGCATCTaGTGGTCCATTGAGACCATC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLLTCI*WSIETI
Trigger: GATGGTCTCAATGGACCATCAGATGCAAGTGAGCAG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACTGCTCACTTGCATCTaGTGGTCCATTGAGACCATC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKLLTCI*WSIETI
Trigger: GATGGTCTCAATGGACCATCAGATGCAAGTGAGCAG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCAATTTTGGGGATCCTaGCCTGATAATGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPQFWGS*PDNARW
Trigger: CCACCGAGCATTATCAGGTCAGGATCCCCAAAATTG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATCCTGAAGCCAAACCCTaGCTCTTGTTTTCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNPEAKP*LLFSKK
Trigger: TTTCTTCGAAAACAAGAGTCAGGGTTTGGCTTCAGG...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGGAGCAGCAGTTGTCATaGGGTCCAAGACTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWEQQLS*GPRLVC
Trigger: ACAAACAAGTCTTGGACCTCATGACAACTGCTGCTC...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAACCGGACTTCCTTCTATaGCTCGGCCAATTTTATGAG +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEPDFLL*LGQFYE
Trigger: CTCATAAAATTGGCCGAGTCATAGAAGGAAGTCCGG...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTTTCACTGCAGAGATATaGTCTCCAACTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFFTAEI*SPTFSF
Trigger: AAAACTGAAAGTTGGAGATCATATCTCTGCAGTGAA...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCTGATGGTGGACCATaGTGCTCTTCTTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPDGGP*CSSSAM
Trigger: CATTGCTGAAGAAGAGCATCATGGTCCACCATCAGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCAGCAAGACGAAGGATaGACAGCCCCATGTTGTACT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPQQDEG*TAPCCT
Trigger: AGTACAACATGGGGCTGTTCATCCTTCGTCTTGCTG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAATTCCACCAGCCTGAATaGGCTCAATTGCTCGAGTAT +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEFHQPE*AQLLEY
Trigger: ATACTCGAGCAATTGAGCTCATTCAGGCTGGTGGAA...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TTTCTTAACTGGAGAACTGCTTTCCGGTTTGAACCTTCCAGTCTCTTTGTTTTTTTATTTCCACCAGCCTaGATGAGCTCAATTGCTCGA +
Preference number: 4 (lower is better)
Translates to: FLNWRTAFRFEPSSLFVFLFPPA*MSSIAR
Trigger: TCGAGCAATTGAGCTCATTCAGGCTGGTGGAAATAA...AAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGAGCCTGCCCTGGTGCTaGCCTGACAACTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKSLPWC*PDNFYF
Trigger: AAAATAAAAGTTGTCAGGTCAGCACCAGGGCAGGCT...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATTGCTTCACAACAAGATaGACCCAGGTGACAGAACAA +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNCFTTR*TQVTEQ
Trigger: TTGTTCTGTCACCTGGGTTCATCTTGTTGTGAAGCA...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAACCTTGCTGAGCCAGTaGTTCTTCTTCTTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKTLLSQ*FFFFSV
Trigger: GACGCTGAAGAAGAAGAAGCACTGGCTCAGCAAGGT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTTCTTAACTGGAGAACTGCTTTCCGGTTTGAACCTTCCAGTCTCTTTGTTTTTTCAGATGACTCAGAATaGCTCTCTCTGTTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: FLNWRTAFRFEPSSLFVFSDDSE*LSLFSA
Trigger: CGCAGAAAACAGAGAGAGGCATTCTGAGTCATCTGA...AAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACATCTGGACAACATCTaGATGAGTGTGACCGAGGAC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKHLDNI*MSVTED
Trigger: GTCCTCGGTCACACTCATGCAGATGTTGTCCAGATG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGCTGCTCCAGAACCATTaGTCCTGGCTTAAAATCCTG +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWLLQNH*SWLKIL
Trigger: CAGGATTTTAAGCCAGGAGCAATGGTTCTGGAGCAG...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAACCCGATTTTCCATTCTaGTCCAGAACCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEPDFPF*SRTIAP
Trigger: AGGAGCAATGGTTCTGGAGCAGAATGGAAAATCGGG...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATCAGGCTGTGCAAGGTaGTTGTGGTCTGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKSGCAR*LWSDQE
Trigger: TTCTTGGTCAGACCACAAGCACCTTGCACAGCCTGA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTCAGGCTGTGCAAGGTaGTTGTGGTCTGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSGCAR*LWSDQE
Trigger: TTCTTGGTCAGACCACAAGCACCTTGCACAGCCTGA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGTCTGCTCAGCATTACTaGCCGTATAGCCTGCTATTC +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKSAQHY*PYSLLF
Trigger: GAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGA...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAGTTCTGCTGGAGGCTTaGGAGTTCCATAGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEVLLEA*EFHRSF
Trigger: GAAACTTCTATGGAACTCCCAAGCCTCCAGCAGAAC...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGTTGATCAACTGGATCTaGCTGAAAAGGGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKLINWI*LKRAGF
Trigger: GAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAA...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGCCATTTCCCAGTTTTTaGGCAGTGGTTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKPFPSF*AVVPES
Trigger: AGACTCTGGAACCACTGCCCAAAAACTGGGAAATGG...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATAGGACACCTTTAAGCTaGGATGGATCTCTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNRTPLS*DGSLVK
Trigger: CTTCACAAGAGATCCATCCCAGCTTAAAGGTGTCCT...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGCCTGACGATGCCATaGATACTCTCTGCTCACTTG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPCLTMP*ILSAHL
Trigger: CAAGTGAGCAGAGAGTATCCATGGCATCGTCAGGCA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATGCCTGACGATGCCATaGATACTCTCTGCTCACTTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKCLTMP*ILSAHL
Trigger: CAAGTGAGCAGAGAGTATCCATGGCATCGTCAGGCA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCTGATAATGCTCGGTaGAAAAGGCATAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPDNAR*KRHRLR
Trigger: CCTCAGCCTATGCCTTTTCCACCGAGCATTATCAGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTTATCAAGCCAGTTCCTaGCCTCAAAAGAAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLIYQASS*PQKKKN
Trigger: GTTCTTCTTCTTTTGAGGCCAGGAACTGGCTTGATA...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CCA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACAGATTCTTCAATTACTaGCACGTGAGACTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYRFFNY*HVRLFK
Trigger: TTTGAAGAGTCTCACGTGCCAGTAATTGAAGAATCT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTTCAAAAATCTCACTCTaGGAAGCATGTCTTATCTAC +
Preference number: 4 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGSKISL*EACLIY
Trigger: GTAGATAAGACATGCTTCCCAGAGTGAGATTTTTGA...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATTTCTTTCCATCTTGCTaGCAGATGTCGTTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNFFPSC*QMSFVF
Trigger: GAAAACGAACGACATCTGTCAGCAAGATGGAAAGAA...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACTTCATCCAGTCAGATaGCTCAGAATGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKLHPVR*LRMPLS
Trigger: AGAGAGAGGCATTCTGAGTCATCTGACTGGATGAAG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTTTCCATATCTGGTTTTaGAGACCCAATTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLIFHIWF*RPNFNL
Trigger: CAGGTTGAAATTGGGTCTTCAAAACCAGATATGGAA...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR TCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGCCTGGCTTAAAATCCTaGGGATTCATGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWPGLKS*GFMQVS
Trigger: AGAGACTTGCATGAATCCTCAGGATTTTAAGCCAGG...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCATCTGATGGTCCATTaGGACCATCACCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPHLMVH*DHHQSK
Trigger: CTTTGACTGGTGATGGTCTCAATGGACCATCAGATG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACATCTGATGGTCCATTaGGACCATCACCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKHLMVH*DHHQSK
Trigger: CTTTGACTGGTGATGGTCTCAATGGACCATCAGATG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGGGAAAAGGCATAGGCTaGGGAATAGGCTCATTTATG +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWGKGIG*GIGSFM
Trigger: CATAAATGAGCCTATTCCTCAGCCTATGCCTTTTCC...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAGGAAAAGGCATAGGCTaGGGAATAGGCTCATTTATG +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEGKGIG*GIGSFM
Trigger: CATAAATGAGCCTATTCCTCAGCCTATGCCTTTTCC...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAACCTGAAGCCAAACCCTaGCTCTTGTTTTCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEPEAKP*LLFSKK
Trigger: TTTCTTCGAAAACAAGAGTCAGGGTTTGGCTTCAGG...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGAGCAGCAGTTGTCATaGGGTCCAAGACTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKEQQLS*GPRLVC
Trigger: ACAAACAAGTCTTGGACCTCATGACAACTGCTGCTC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACATTCTGTGTTGAAATaGAGGCCTGAGAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKHSVLK*RPESCR
Trigger: ACGACAGCTCTCAGGCCTTCATTTCAACACAGAATG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCGGACTTCCTTCTATaGCTCGGCCAATTTTATGAG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPDFLL*LGQFYE
Trigger: CTCATAAAATTGGCCGAGTCATAGAAGGAAGTCCGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGAATTCTGCCATCTTTaGTGGCAGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPEFCHL*WQDHLQ
Trigger: CTGAAGATGGTCCTGCCATCAAAGATGGCAGAATTC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGAATTCTGCCATCTTTaGTGGCAGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKEFCHL*WQDHLQ
Trigger: CTGAAGATGGTCCTGCCATCAAAGATGGCAGAATTC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTCCACCAGCCTGAATaGGCTCAATTGCTCGAGTAT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPFHQPE*AQLLEY
Trigger: ATACTCGAGCAATTGAGCTCATTCAGGCTGGTGGAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAATTTCCTGATGACGTCTaGTTTTTCCTTCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEFPDDV*FFLPIW
Trigger: CCAGATGGGAAGGAAAAATCAGACGTCATCAGGAAA...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATGCTGCTTCAGGGAACTaGAAAACCTGGATCTATTTT +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNAASGN*KTWIYF
Trigger: AAAATAGATCCAGGTTTTTCAGTTCCCTGAAGCAGC...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATAATCCTGAGGATTCATaGAAGTCTCTCCCTTGGTTA +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNNPEDS*KSLPWL
Trigger: TAACCAAGGGAGAGACTTGCATGAATCCTCAGGATT...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACTGCTCCAGAACCATTaGTCCTGGCTTAAAATCCTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKLLQNH*SWLKIL
Trigger: CAGGATTTTAAGCCAGGAGCAATGGTTCTGGAGCAG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCCGATTTTCCATTCTaGTCCAGAACCATTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPDFPF*SRTIAP
Trigger: AGGAGCAATGGTTCTGGAGCAGAATGGAAAATCGGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGCACCTACTGGAAACTaGTTTAGCACCTCTACCACT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPAPTGN*FSTSTT
Trigger: AGTGGTAGAGGTGCTAAAGCAGTTTCCAGTAGGTGC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCACCATCTTTCTCAGCTaGTCCCAGGGGAATAATAGC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPTIFLS*SQGNNS
Trigger: GCTATTATTCCCCTGGGAGCAGCTGAGAAAGATGGT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAACCATCTTTCTCAGCTaGTCCCAGGGGAATAATAGC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKTIFLS*SQGNNS
Trigger: GCTATTATTCCCCTGGGAGCAGCTGAGAAAGATGGT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGGCCCTTGTAGTGCATaGAATGGTTCTCAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPGPCSA*NGSQVE
Trigger: CTCTACTTGAGAACCATTCCATGCACTACAAGGGCC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGTTCTGCTGGAGGCTTaGGAGTTCCATAGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPVLLEA*EFHRSF
Trigger: GAAACTTCTATGGAACTCCCAAGCCTCCAGCAGAAC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTGATCAACTGGATCTaGCTGAAAAGGGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLINWI*LKRAGF
Trigger: GAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGAGGACTTGATCAACTaGATCTGGCTGAAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPEDLIN*IWLKRA
Trigger: AGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCAGTTTTTGGGCAGTaGTTCCAGAGTCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPVFGQ*FQSLIS
Trigger: AGAGATGAGACTCTGGAACCACTGCCCAAAAACTGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCATTTCCCAGTTTTTaGGCAGTGGTTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKPFPSF*AVVPES
Trigger: AGACTCTGGAACCACTGCCCAAAAACTGGGAAATGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCATTTCCCAGTTTTTaGGCAGTGGTTCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPFPSF*AVVPES
Trigger: AGACTCTGGAACCACTGCCCAAAAACTGGGAAATGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGAGGATCCAACCAGGTaGTTGTCTTGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKEDPTR*LSWYCG
Trigger: ACCACAATACCAAGACAACCACCTGGTTGGATCCTC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGAGGATCCAACCAGGTaGTTGTCTTGGTATTGTGGT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPEDPTR*LSWYCG
Trigger: ACCACAATACCAAGACAACCACCTGGTTGGATCCTC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTTCTTAACTGGAGAACTGCTTTCCGGTTTGAACCTTCCAGTCTCTTTGTTTTTTACAATAACATCGCCTaGTGCAATTTTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: FLNWRTAFRFEPSSLFVFYNNIA*CNFPIL
Trigger: CAGGATGGGAAAATTGCACCAGGCGATGTTATTGTA...AAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATCAGAACCATTGCTCCTaGCTTAAAATCCTGAGGATT +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNQNHCS*LKILRI
Trigger: AATCCTCAGGATTTTAAGCCAGGAGCAATGGTTCTG...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATAATAACTCCTGGAGGTaGTTTGTTTTTGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNNNSWR*FVFGGE
Trigger: CTCACCTCCAAAAACAAACCACCTCCAGGAGTTATT...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGAGACAGTTCAACAATaGACTGCCCATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPETVQQ*TAHSLQ
Trigger: CTGCAGTGAATGGGCAGTCCATTGTTGAACTGTCTC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATGTGCAAGGTGCTTGTaGTCTGACCAAGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKCARCL*SDQECL
Trigger: CAGACATTCTTGGTCAGACCACAAGCACCTTGCACA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGTGCAAGGTGCTTGTaGTCTGACCAAGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPCARCL*SDQECL
Trigger: CAGACATTCTTGGTCAGACCACAAGCACCTTGCACA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATAGTATACATCGAGGTTaGATAACACAGCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNSIHRG*ITQQEM
Trigger: CATCTCCTGCTGTGTTATCCAACCTCGATGTATACT...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGAAGGAGCCAAACCATaGTCAGGTATCAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKEGAKP*SGIKPV
Trigger: AACTGGCTTGATACCTGACCATGGTTTGGCTCCTTC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGAAGGAGCCAAACCATaGTCAGGTATCAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPEGAKP*SGIKPV
Trigger: AACTGGCTTGATACCTGACCATGGTTTGGCTCCTTC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAATGGTATTGTGGTCAATaGAGTAGATCATCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEWYCGQ*SRSSLC
Trigger: ACACAGGGATGATCTACTTCATTGACCACAATACCA...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCTGGCTTAAAATCCTaGGGATTCATGCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKPGLKS*GFMQVS
Trigger: AGAGACTTGCATGAATCCTCAGGATTTTAAGCCAGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGGAAAAGGCATAGGCTaGGGAATAGGCTCATTTATG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKGKGIG*GIGSFM
Trigger: CATAAATGAGCCTATTCCTCAGCCTATGCCTTTTCC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGGAAAAGGCATAGGCTaGGGAATAGGCTCATTTATG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPGKGIG*GIGSFM
Trigger: CATAAATGAGCCTATTCCTCAGCCTATGCCTTTTCC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCTGAAGCCAAACCCTaGCTCTTGTTTTCGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPEAKP*LLFSKK
Trigger: TTTCTTCGAAAACAAGAGTCAGGGTTTGGCTTCAGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGATCCATTCTGTGTTaGAATGAAGGCCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKRSILC*NEGLRA
Trigger: AGCTCTCAGGCCTTCATTTCAACACAGAATGGATCT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAGATCCATTCTGTGTTaGAATGAAGGCCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPRSILC*NEGLRA
Trigger: AGCTCTCAGGCCTTCATTTCAACACAGAATGGATCT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAACTCGGCCAATTTTATaGGGAATAACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKTRPIL*GITPGG
Trigger: ACCTCCAGGAGTTATTCCTCATAAAATTGGCCGAGT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCACTCGGCCAATTTTATaGGGAATAACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPTRPIL*GITPGG
Trigger: ACCTCCAGGAGTTATTCCTCATAAAATTGGCCGAGT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAATCTGGTCACCAACATaGATTCTGCCATCTTTGATG +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEIWSPT*ILPSLM
Trigger: CATCAAAGATGGCAGAATTCATGTTGGTGACCAGAT...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTATTTCCACCAGCCTaGATGAGCTCAATTGCTCGA +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLFPPA*MSSIAR
Trigger: TCGAGCAATTGAGCTCATTCAGGCTGGTGGAAATAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAGCTGCTTCAGGGAACTaGAAAACCTGGATCTATTTT +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEAASGN*KTWIYF
Trigger: AAAATAGATCCAGGTTTTTCAGTTCCCTGAAGCAGC...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGTCTACAGGGGCTAATTaGGTTGTTGGGTTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKSTGAN*VVGLKS
Trigger: ACTCTTTAACCCAACAACTCAATTAGCCCCTGTAGA...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGCCTCTCTCTGTTTTCTaGGTTTCCACTGCCATTAAT +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWPLSVF*VSTAIN
Trigger: ATTAATGGCAGTGGAAACGCAGAAAACAGAGAGAGG...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATCAGATGACTCAGAATaGCTCTCTCTGTTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKSDDSE*LSLFSA
Trigger: CGCAGAAAACAGAGAGAGGCATTCTGAGTCATCTGA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAATAACATCGCCTGGTaGAATTTTCCCATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPNNIAW*NFPILS
Trigger: GCTCAGGATGGGAAAATTGCACCAGGCGATGTTATT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGAATCCTGAGGATTCATaGAAGTCTCTCCCTTGGTTA +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKNPEDS*KSLPWL
Trigger: TAACCAAGGGAGAGACTTGCATGAATCCTCAGGATT...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAAGTTCAACAATGGACTaGCCATTCACTGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVESSTMD*PFTAEI
Trigger: TATCTCTGCAGTGAATGGGCAGTCCATTGTTGAACT...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGCTGAATGAGCTCAATTaGTCGAGTATGTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWLNELN*SSMCDS
Trigger: GGAATCACACATACTCGAGCAATTGAGCTCATTCAG...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAATTATAATCCACTCCTaGTACTTCTCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKIIIHS*YFSIPG
Trigger: CCCAGGGATGGAGAAGTACCAGGAGTGGATTATAAT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCATTATAATCCACTCCTaGTACTTCTCCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPIIIHS*YFSIPG
Trigger: CCCAGGGATGGAGAAGTACCAGGAGTGGATTATAAT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTTCTTAACTGGAGAACTGCTTTCCGGTTTGAACCTTCCAGTCTCTTTGTTTTTTGTTTGGTTGTAACTTaGAACAGTCTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: FLNWRTAFRFEPSSLFVFCLVVT*NSLHPV
Trigger: GACTGGATGAAGACTGTTCCAAGTTACAACCAAACA...AAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAGGACACCTTTAAGCTaGGATGGATCTCTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPRTPLS*DGSLVK
Trigger: CTTCACAAGAGATCCATCCCAGCTTAAAGGTGTCCT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGCCAATATATATAGACTaGTCAGGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKPIYID*SGPSPP
Trigger: AGGAGGAGATGGACCTGACCAGTCTATATATATTGG...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGACAGTTAGTAACACATaGCCATTTCGAGCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWTVSNT*PFRAAV
Trigger: AACTGCTGCTCGAAATGGCCATGTGTTACTAACTGT...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGACAGTTAGTAACACATaGCCATTTCGAGCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKTVSNT*PFRAAV
Trigger: AACTGCTGCTCGAAATGGCCATGTGTTACTAACTGT...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATCTCTCCAGCTCTACTaGATAACAACCAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKSLQLY*ITTKVL
Trigger: CAGAACCTTGGTTGTTATCCAGTAGAGCTGGAGAGA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTCTCTCCAGCTCTACTaGATAACAACCAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSLQLY*ITTKVL
Trigger: CAGAACCTTGGTTGTTATCCAGTAGAGCTGGAGAGA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAATATCCCAATCACCATaGTCAGGTATCAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEISQSP*SGIKPV
Trigger: AACTGGCTTGATACCTGACCATGGTGATTGGGATAT...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATTCTTTCCATCTTGCTaGCAGATGTCGTTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKFFPSC*QMSFVF
Trigger: GAAAACGAACGACATCTGTCAGCAAGATGGAAAGAA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATGGTATTGTGGTCAATaGAGTAGATCATCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKWYCGQ*SRSSLC
Trigger: ACACAGGGATGATCTACTTCATTGACCACAATACCA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCATCTGGTCACCAACATaGATTCTGCCATCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPIWSPT*ILPSLM
Trigger: CATCAAAGATGGCAGAATTCATGTTGGTGACCAGAT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCTCTCTCTGTTTTCTaGGTTTCCACTGCCATTAAT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPLSVF*VSTAIN
Trigger: ATTAATGGCAGTGGAAACGCAGAAAACAGAGAGAGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCTCTCTCTGTTTTCTaGGTTTCCACTGCCATTAAT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKPLSVF*VSTAIN
Trigger: ATTAATGGCAGTGGAAACGCAGAAAACAGAGAGAGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAATCCTGAGGATTCATaGAAGTCTCTCCCTTGGTTA +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPNPEDS*KSLPWL
Trigger: TAACCAAGGGAGAGACTTGCATGAATCCTCAGGATT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAATCCTGAGGATTCATaGAAGTCTCTCCCTTGGTTA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKNPEDS*KSLPWL
Trigger: TAACCAAGGGAGAGACTTGCATGAATCCTCAGGATT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGTTCAACAATGGACTaGCCATTCACTGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKSSTMD*PFTAEI
Trigger: TATCTCTGCAGTGAATGGGCAGTCCATTGTTGAACT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAGTTCAACAATGGACTaGCCATTCACTGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSSTMD*PFTAEI
Trigger: TATCTCTGCAGTGAATGGGCAGTCCATTGTTGAACT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATCTGATTGTGCCGACTaGCTACAACTGAAATTACTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKSDCAD*LQLKLL
Trigger: CAGTAATTTCAGTTGTAGGCAGTCGGCACAATCAGA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTCTGATTGTGCCGACTaGCTACAACTGAAATTACTG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSDCAD*LQLKLL
Trigger: CAGTAATTTCAGTTGTAGGCAGTCGGCACAATCAGA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCTGAATGAGCTCAATTaGTCGAGTATGTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLNELN*SSMCDS
Trigger: GGAATCACACATACTCGAGCAATTGAGCTCATTCAG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACTGAATGAGCTCAATTaGTCGAGTATGTGTGATTCC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKLNELN*SSMCDS
Trigger: GGAATCACACATACTCGAGCAATTGAGCTCATTCAG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGTTCTCTTCAGGTTCTTaGTTCAGCCTCTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKFSSGS*FSLFSD
Trigger: ATCAGAAAAGAGGCTGAAGCAAGAACCTGAAGAGAA...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGTATACTAAAGGTTACTaGCGTTTCTCAGCCATACCA +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWYTKGY*RFSAIP
Trigger: TGGTATGGCTGAGAAACGGCAGTAACCTTTAGTATA...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGATAGATGCTACTGAATaGTGCTTCAGGGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWIDATE*CFRELK
Trigger: TTTCAGTTCCCTGAAGCAGCATTCAGTAGCATCTAT...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGATTAATGACTTTGCCTaGTTTCACAGTCTTGAGACG +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKINDFA*FHSLET
Trigger: CGTCTCAAGACTGTGAAACCAGGCAAAGTCATTAAT...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTACAATAACATCGCCTaGTGCAATTTTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPYNNIA*CNFPIL
Trigger: CAGGATGGGAAAATTGCACCAGGCGATGTTATTGTA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATACAATAACATCGCCTaGTGCAATTTTCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKYNNIA*CNFPIL
Trigger: CAGGATGGGAAAATTGCACCAGGCGATGTTATTGTA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACAGAACCATTGCTCCTaGCTTAAAATCCTGAGGATT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKQNHCS*LKILRI
Trigger: AATCCTCAGGATTTTAAGCCAGGAGCAATGGTTCTG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCAGAACCATTGCTCCTaGCTTAAAATCCTGAGGATT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPQNHCS*LKILRI
Trigger: AATCCTCAGGATTTTAAGCCAGGAGCAATGGTTCTG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGCACCTCTACCACTTaGAGATGTGTTAAATTCTGC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKSTSTT*RCVKFC
Trigger: GCAGAATTTAACACATCTCCAAGTGGTAGAGGTGCT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCAATATATATAGACTaGTCAGGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKPIYID*SGPSPP
Trigger: AGGAGGAGATGGACCTGACCAGTCTATATATATTGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCAATATATATAGACTaGTCAGGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPIYID*SGPSPP
Trigger: AGGAGGAGATGGACCTGACCAGTCTATATATATTGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCACAGTTAGTAACACATaGCCATTTCGAGCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPTVSNT*PFRAAV
Trigger: AACTGCTGCTCGAAATGGCCATGTGTTACTAACTGT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAATAACTCCTGGAGGTaGTTTGTTTTTGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKNNSWR*FVFGGE
Trigger: CTCACCTCCAAAAACAAACCACCTCCAGGAGTTATT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTATCAAGCCAGTTCCTaGCCTCAAAAGAAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPYQASS*PQKKKN
Trigger: GTTCTTCTTCTTTTGAGGCCAGGAACTGGCTTGATA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATATCAAGCCAGTTCCTaGCCTCAAAAGAAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKYQASS*PQKKKN
Trigger: GTTCTTCTTCTTTTGAGGCCAGGAACTGGCTTGATA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAAGAAGAGTTGGTACTTaGACTGTGAAACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVERRVGT*TVKLVS
Trigger: TGAAACCAGTTTCACAGTCCAAGTACCAACTCTTCT...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAGTAGAGATTATCTCTaGTCACTTGCTGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSRDYL*SLAAVC
Trigger: ACAAACTGCAGCAAGTGATCAGAGATAATCTCTACT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGACTGTTCAACGGAAATaGAATTATAATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWTVQRK*NYNPLL
Trigger: CAGGAGTGGATTATAATTTCATTTCCGTTGAACAGT...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATTCCATATCTGGTTTTaGAGACCCAATTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKFHIWF*RPNFNL
Trigger: CAGGTTGAAATTGGGTCTTCAAAACCAGATATGGAA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTCCATATCTGGTTTTaGAGACCCAATTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPFHIWF*RPNFNL
Trigger: CAGGTTGAAATTGGGTCTTCAAAACCAGATATGGAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTGACAGGTACCAATTaGAACATCTGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLTGTN*NIWTTS
Trigger: AGATGTTGTCCAGATGTTTCAATTGGTACCTGTCAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATTGACAGGTACCAATTaGAACATCTGGACAACATCT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKLTGTN*NIWTTS
Trigger: AGATGTTGTCCAGATGTTTCAATTGGTACCTGTCAA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGTTCACTGCAGAGATATaGTCTCCAACTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWFTAEI*SPTFSF
Trigger: AAAACTGAAAGTTGGAGATCATATCTCTGCAGTGAA...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGATCTTCTGTTTTGTTTaGAACTACCTTCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKIFCFV*NYLLFR
Trigger: CCTGAAGAGAAGGTAGTTTCAAACAAAACAGAAGAT...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAATAAAAAGGGTGACCTaGGATGCTGTAAGTATACAT +
Preference number: 4 (lower is better)
Translates to: AIEIINFQAKPNFFITVEIKRVT*DAVSIH
Trigger: ATGTATACTTACAGCATCTCAGGTCACCCTTTTTAT...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTCTCTGATCACTTGCTaGAGTTTGTGGTCAATTGAT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSLITC*SLWSID
Trigger: ATCAATTGACCACAAACTGCAGCAAGTGATCAGAGA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCAGGAATTCCATCAATaGACATTAGTTCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPQEFHQ*TLVHQL
Trigger: CAGCTGATGAACTAATGTGCATTGATGGAATTCCTG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR GCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACAGGAATTCCATCAATaGACATTAGTTCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKQEFHQ*TLVHQL
Trigger: CAGCTGATGAACTAATGTGCATTGATGGAATTCCTG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCATTAATGACTTTGCCTaGTTTCACAGTCTTGAGACG +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPINDFA*FHSLET
Trigger: CGTCTCAAGACTGTGAAACCAGGCAAAGTCATTAAT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGTTTGGTTGTAACTTaGAACAGTCTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPCLVVT*NSLHPV
Trigger: GACTGGATGAAGACTGTTCCAAGTTACAACCAAACA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATGTTTGGTTGTAACTTaGAACAGTCTTCATCCAGTC +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKCLVVT*NSLHPV
Trigger: GACTGGATGAAGACTGTTCCAAGTTACAACCAAACA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CCA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGTCAAAAATCTCACTCTaGGAAGCATGTCTTATCTAC +
Preference number: 4 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKSKISL*EACLIY
Trigger: GTAGATAAGACATGCTTCCCAGAGTGAGATTTTTGA...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAACTGTTCAACGGAAATaGAATTATAATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKTVQRK*NYNPLL
Trigger: CAGGAGTGGATTATAATTTCATTTCCGTTGAACAGT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGGTTTACATACTGATTaGCAGGTACCAATTGAAACA +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKGLHTD*QVPIET
Trigger: TGTTTCAATTGGTACCTGTCAATCAGTATGTAAACC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGGTTTACATACTGATTaGCAGGTACCAATTGAAACA +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPGLHTD*QVPIET
Trigger: TGTTTCAATTGGTACCTGTCAATCAGTATGTAAACC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTCACTGCAGAGATATaGTCTCCAACTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPFTAEI*SPTFSF
Trigger: AAAACTGAAAGTTGGAGATCATATCTCTGCAGTGAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR TCA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATTCACTGCAGAGATATaGTCTCCAACTTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: RHANLPSLFKERPRKALKFTAEI*SPTFSF
Trigger: AAAACTGAAAGTTGGAGATCATATCTCTGCAGTGAA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS CCA 90 bp CAGGAGGTTCCAGAAGGGGCTTCGGGCGGGGTCACTGCCGCCGGCTaGTCCCTGGGCTCAGCGCCCGAGCGGCGGGAAAGGCTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: QEVPEGASGGVTAAG*SLGSAPERRERLRR
Trigger: CCGCCTCAGCCTTTCCCGCCGCTCGGGCGCTGAGCCCAGGGACCAGCCGGCGGCAGTGACCCCGCCCGAAGCCCCTTCTGGAACCTCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS CCA 90 bp GAGCCCGCTGACAGGCGTCCCGTTTACCTCCAGCAGCACATCGCCTaGGCTGGGCGCCTTGCCCGAGACGACGCAGCAGGTGCCCCCGCC +
Preference number: 5 (lower is better)
Translates to: EPADRRPVYLQQHIA*AGRLARDDAAGAPA
Trigger: GGCGGGGGCACCTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAGGCGATGTGCTGCTGGAGGTAAACGGGACGCCTGTCAGCGGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
ENST00000486456.1
CDS GCA 90 bp GCGCCGAAGTCGCCCGGGGGCCCGGCCCAGGACACGGCGCACTCCTaGACCTTGCTGAGCCAGTGCTTCTTCTTCTTCAGCGTCTTCGAC +
Preference number: 5 (lower is better)
Translates to: APKSPGGPAQDTAHS*TLLSQCFFFFSVFD
Trigger: GTCGAAGACGCTGAAGAAGAAGAAGCACTGGCTCAGCAAGGTGCAGGAGTGCGCCGTGTCCTGGGCCGGGCCCCCGGGCGACTTCGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS TCA 90 bp CGCCCGGGGGCCCGGCCCAGGACACGGCGCACTCCTGCACCTTGCTaGGCCAGTGCTTCTTCTTCTTCAGCGTCTTCGACATCCCGAACC +
Preference number: 5 (lower is better)
Translates to: RPGARPRTRRTPAPC*ASASSSSASSTSRT
Trigger: GGTTCGGGATGTCGAAGACGCTGAAGAAGAAGAAGCACTGGCTCAGCAAGGTGCAGGAGTGCGCCGTGTCCTGGGCCGGGCCCCCGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 90 bp ACTTTGCCTGGTTTCACAGTCTTGAGACGGATGGGCTCGCGGAAGTaGCGGATGACAGCCAGGGTGTCCCGGTTGGTGAGCCCGCTGACA +
Preference number: 5 (lower is better)
Translates to: TLPGFTVLRRMGSRK*RMTARVSRLVSPLT
Trigger: TGTCAGCGGGCTCACCAACCGGGACACCCTGGCTGTCATCCGCCACTTCCGCGAGCCCATCCGTCTCAAGACTGTGAAACCAGGCAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
ENST00000486456.1
CDS-3UTR CAA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGGACGCGAGACGCCCCTaGGACGCCCCTCCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: TYVICSDTHEDELGSLSRDARRP*DAPPGC
Trigger: GCAGCCGGGAGGGGCGTCCAAGGGGCGTCTCGCGTC...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR CAA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTGCCATTTCCCAGTTTTaGGGCAGTGGTTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: MQLLPESEGGQPARGTVGAISQF*GSGSRV
Trigger: GACTCTGGAACCACTGCCCAAAAACTGGGAAATGGC...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTCGGCCAGGGGGACAGTaGGTTCTTAGCAATCCTAAA +
Preference number: 5 (lower is better)
Translates to: MQLLPESEGGQPARGTVGRPGGQ*VLSNPK
Trigger: TTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCG...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS GCA 90 bp TCCCCAGGTATGTGGTTGGCCTGTGACTGTCCCATGGGCCTGTGCTaGAGGGCTGGGCTTTGCCTGGCTGAGTTTGTTCCTGATGGTGGA +
Preference number: 5 (lower is better)
Translates to: SPGMWLACDCPMGLC*RAGLCLAEFVPDGG
Trigger: TCCACCATCAGGAACAAACTCAGCCAGGCAAAGCCCAGCCCTGCAGCACAGGCCCATGGGACAGTCACAGGCCAACCACATACCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCCTGGGCTGGGCGCCTaGCCCGAGACGACGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TYVICSDTHEDELGSLSRPGLGA*PETTQQ
Trigger: CTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAGG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS TCA 90 bp GGCTGGGACCTCTGCCCGGTTCAGGCGGGGAGATCCATTCTGTGTTaGAATGAAGGCCTGAGAGCTGTCGTCCTCGGGTTGTTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: GWDLCPVQAGRSILC*NEGLRAVVLGLFFS
Trigger: GGAGAAAAACAACCCGAGGACGACAGCTCTCAGGCCTTCATTTCAACACAGAATGGATCTCCCCGCCTGAACCGGGCAGAGGTCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACACCTGGGCTGGGCGCCTaGCCCGAGACGACGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTPGLGA*PETTQQ
Trigger: CTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAGG...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTTTTTGGCAGTTTTGGTaGGTGAAGGAGGACCTCCTC +
Preference number: 5 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPFWQFW*VKEDLL
Trigger: GAGGAGGTCCTCCTTCACCAACCAAAACTGCCAAAA...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCCGGCCAGGGGGACAGTaGGTTCTTAGCAATCCTAAA +
Preference number: 5 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCRPGGQ*VLSNPK
Trigger: TTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCG...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTAAGTATACATCGAGGTaGGATAACACAGCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: MQLLPESEGGQPARGTVGKYTSR*DNTAGD
Trigger: ATCTCCTGCTGTGTTATCCAACCTCGATGTATACTT...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACGCCAGGGTGTCCCGGTaGGTGAGCCCGCTGACAGGC +
Preference number: 5 (lower is better)
Translates to: TTAIFNDELTVSSSARTHARVSR*VSPLTG
Trigger: GCCTGTCAGCGGGCTCACCAACCGGGACACCCTGGC...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ATGCAGCTCCTTCCTGAGAGCGAGGGAGGGCAGCCGGCCAGGGGGACAGTTGGTTGTCGTTCGTTTTCTTaGAGATTCTGCATCAAACTC +
Preference number: 5 (lower is better)
Translates to: MQLLPESEGGQPARGTVGCRSFS*RFCIKL
Trigger: GAGTTTGATGCAGAATCTCAAAGAAAACGAACGACA...ACCAACTGTCCCCCTGGCCGGCTGCCCTCCCTCGCTCTCAGGAAGGAGCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTAACCTTCCAGTCTCTTaGTTTTTGTCAGCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPNLPVS*FLSAAS
Trigger: AGAGGCAGCTGACAAAAACAAAGAGACTGGAAGGTT...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS TCA 90 bp GGACCTCTGCCCGGTTCAGGCGGGGAGATCCATTCTGTGTTGAAATaGAGGCCTGAGAGCTGTCGTCCTCGGGTTGTTTTTCTCCATAGA +
Preference number: 5 (lower is better)
Translates to: GPLPGSGGEIHSVLK*RPESCRPRVVFLHR
Trigger: TCTATGGAGAAAAACAACCCGAGGACGACAGCTCTCAGGCCTTCATTTCAACACAGAATGGATCTCCCCGCCTGAACCGGGCAGAGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 90 bp CTACAGAAATCACAGGTTGCTGACCAGCCAATAAACTGGTTGCTTTaGGTGAGGTGCTCTCCCTGCCTGTGGCTTGCAGGGGAGGTTGAC +
Preference number: 5 (lower is better)
Translates to: LQKSQVADQPINWLL*VRCSPCLWLAGEVD
Trigger: GTCAACCTCCCCTGCAAGCCACAGGCAGGGAGAGCACCTCACCCAAAGCAACCAGTTTATTGGCTGGTCAGCAACCTGTGATTTCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS-3UTR CAA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGCCTGGTTTCACAGTCTaGAGACGGATGGGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: TYVICSDTHEDELGSLSRPGFTV*RRMGSR
Trigger: CCGCGAGCCCATCCGTCTCAAGACTGTGAAACCAGG...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCTCCTTTCTGAAGGCCTaGACACCACTGACTATCCAG +
Preference number: 5 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSSFLKA*TPLTIQ
Trigger: CTGGATAGTCAGTGGTGTCAAGGCCTTCAGAAAGGA...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp CTGGGCAGCCTGAGCAGGGCGGGTCAGATGAGCATGTGGATGCAGCTCCTTCCTAGTATGTGTGATTCCTaGTGTAGGTTCCCCATTGAT +
Preference number: 5 (lower is better)
Translates to: LGSLSRAGQMSMWMQLLPSMCDS*CRFPID
Trigger: ATCAATGGGGAACCTACACAAGGAATCACACATACT...AGGAAGGAGCTGCATCCACATGCTCATCTGACCCGCCCTGCTCAGGCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCTTTAAACACCCAAGCTaGTGCACCTGCTACCAGAAG +
Preference number: 5 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCFKHPS*CTCYQK
Trigger: CTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTTAAA...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCGTACTGTCTACACATTaGTCCTCATTTGCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCVLSTH*SSFAGH
Trigger: ATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGACGCGAGACGCCCCTaGGACGCCCCTCCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKDARRP*DAPPGC
Trigger: GCAGCCGGGAGGGGCGTCCAAGGGGCGTCTCGCGTC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369617.8
CDS TCA 90 bp GCTTTGGGTGAGGTGCTCTCCCTGCCTGTGGCTTGCAGGGGAGGTTaGCGTCAAATGATATCAAACATAGATGTCTCAGCAGCAGTTATG +
Preference number: 5 (lower is better)
Translates to: ALGEVLSLPVACRGG*RQMISNIDVSAAVM
Trigger: CATAACTGCTGCTGAGACATCTATGTTTGATATCATTTGACGTCAACCTCCCCTGCAAGCCACAGGCAGGGAGAGCACCTCACCCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS CCA 90 bp CCCAGCCATAAGGAAGCTCTCCATCTTCACAGTCTTCAGGGGCTTTaGCTTTCTTACAAAGACGAGGATCCAACCAGGTGGTTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: PSHKEALHLHSLQGL*LSYKDEDPTRWLSW
Trigger: CCAAGACAACCACCTGGTTGGATCCTCGTCTTTGTAAGAAAGCCAAAGCCCCTGAAGACTGTGAAGATGGAGAGCTTCCTTATGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 90 bp AACCCTTTAGGGCCCTTAATCAAAGGGATAGTCACTAGTTCAGGCTaGGAGCTGCCTGACGATGCCATGGATACTCTCTGCTCACTTGCA +
Preference number: 5 (lower is better)
Translates to: NPLGPLIKGIVTSSG*ELPDDAMDTLCSLA
Trigger: TGCAAGTGAGCAGAGAGTATCCATGGCATCGTCAGGCAGCTCCCAGCCTGAACTAGTGACTATCCCTTTGATTAAGGGCCCTAAAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 90 bp CTTTTTAAGCTACAGAAATCACAGGTTGCTGACCAGCCAATAAACTaGTTGCTTTGGGTGAGGTGCTCTCCCTGCCTGTGGCTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: LFKLQKSQVADQPIN*LLWVRCSPCLWLAG
Trigger: CCCTGCAAGCCACAGGCAGGGAGAGCACCTCACCCAAAGCAACCAGTTTATTGGCTGGTCAGCAACCTGTGATTTCTGTAGCTTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS-3UTR CAA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTGCGCACTCCTGCACCTaGCTGAGCCAGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFAHSCT*LSQCFF
Trigger: GAAGAAGCACTGGCTCAGCAAGGTGCAGGAGTGCGC...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCTGGGCTGGGCGCCTaGCCCGAGACGACGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKPGLGA*PETTQQ
Trigger: CTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCCTGGGCTGGGCGCCTaGCCCGAGACGACGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPPGLGA*PETTQQ
Trigger: CTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAGG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAGCCAGGGTGTCCCGGTaGGTGAGCCCGCTGACAGGC +
Preference number: 5 (lower is better)
Translates to: AIEIINFQAKPNFFITVEARVSR*VSPLTG
Trigger: GCCTGTCAGCGGGCTCACCAACCGGGACACCCTGGC...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACCCTGGTTTCACAGTCTaGAGACGGATGGGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYPGFTV*RRMGSR
Trigger: CCGCGAGCCCATCCGTCTCAAGACTGTGAAACCAGG...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCATCACTTGCTGCAGTTaGTGGTCAATTGATCCTTTT +
Preference number: 5 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCITCCS*WSIDPF
Trigger: AAAAGGATCAATTGACCACAAACTGCAGCAAGTGAT...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GGCAGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCTTACCCTCTAATAATTaGGCCTCAGCATTTGATGGA +
Preference number: 5 (lower is better)
Translates to: GSRPGGQLVLSNPKGPSCLPSNN*ASAFDG
Trigger: TCCATCAAATGCTGAGGCCAAATTATTAGAGGGTAA...GCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS TCA 90 bp CTTGTACACAAGGTCATGAACATGTCAGTATCCAGTCTCCAGCTTTaGACTGGTTTCACAGTCTTGAGACGGATGGGCTCGCGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LVHKVMNMSVSSLQL*TGFTVLRRMGSRKW
Trigger: CCACTTCCGCGAGCCCATCCGTCTCAAGACTGTGAAACCAGTTCAAAGCTGGAGACTGGATACTGACATGTTCATGACCTTGTGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS CCA 90 bp GAGGACTTGATCAACTGGATCTGGCTGAAAAGGGCTGGGTTCTGCTaGAGGCTTGGGAGTTCCATAGAAGTTTCCATCATATGTCCCACT +
Preference number: 5 (lower is better)
Translates to: EDLINWIWLKRAGFC*RLGSSIEVSIICPT
Trigger: AGTGGGACATATGATGGAAACTTCTATGGAACTCCCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGCCAGGGTGTCCCGGTaGGTGAGCCCGCTGACAGGC +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKARVSR*VSPLTG
Trigger: GCCTGTCAGCGGGCTCACCAACCGGGACACCCTGGC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGCCAGGGTGTCCCGGTaGGTGAGCCCGCTGACAGGC +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPARVSR*VSPLTG
Trigger: GCCTGTCAGCGGGCTCACCAACCGGGACACCCTGGC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGCCGGCCAGGGGGACAGTTGGTTCTTAGCAATCCTAAAGGCCCTTCATGCAGCAGGTCCAAGACTTGTTaGTGTGATTTCCCTTTAACA +
Preference number: 5 (lower is better)
Translates to: SRPGGQLVLSNPKGPSCSRSKTC*CDFPLT
Trigger: TGTTAAAGGGAAATCACACAAACAAGTCTTGGACCT...GCTGCATGAAGGGCCTTTAGGATTGCTAAGAACCAACTGTCCCCCTGGCCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS CCA 90 bp CAGACCGGAAGGAGCCAAACCATGGTCAGGTATCAAGCCAGTTCCTaGCCTCAAAAGAAGAAGAACTTTATTTCCACCAGCCTGAATGAG +
Preference number: 5 (lower is better)
Translates to: QTGRSQTMVRYQASS*PQKKKNFISTSLNE
Trigger: CTCATTCAGGCTGGTGGAAATAAAGTTCTTCTTCTTTTGAGGCCAGGAACTGGCTTGATACCTGACCATGGTTTGGCTCCTTCCGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACGTTAATGACTGTCCATaGATGACAGGGGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDVNDCP*MTGVAA
Trigger: TGCTGCTACCCCTGTCATCAATGGACAGTCATTAAC...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACGCCATTTCCCAGTTTTaGGGCAGTGGTTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYAISQF*GSGSRV
Trigger: GACTCTGGAACCACTGCCCAAAAACTGGGAAATGGC...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTGCTGGGGCTGAGGGATaGATCTCTGGGTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFAGAEG*ISGSSF
Trigger: AAAAGAAGACCCAGAGATCAATCCCTCAGCCCCAGC...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTGCTGGGGCTGAGGGATaGATCTCTGGGTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGAGAEG*ISGSSF
Trigger: AAAAGAAGACCCAGAGATCAATCCCTCAGCCCCAGC...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACGTACTGTCTACACATTaGTCCTCATTTGCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDVLSTH*SSFAGH
Trigger: ATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS GCA 90 bp ACCAGTCAAAGTGTGTCCCGATTTTCCATTCTGCTCCAGAACCATTaGTCCTGGCTTAAAATCCTGAGGATTCATGCAAGTCTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: TSQSVSRFSILLQNH*SWLKILRIHASLSL
Trigger: AAGGGAGAGACTTGCATGAATCCTCAGGATTTTAAGCCAGGAGCAATGGTTCTGGAGCAGAATGGAAAATCGGGACACACTTTGACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 90 bp CATTATCAAAGAGGACTTGATCAACTGGATCTGGCTGAAAAGGGCTaGGTTCTGCTGGAGGCTTGGGAGTTCCATAGAAGTTTCCATCAT +
Preference number: 5 (lower is better)
Translates to: HYQRGLDQLDLAEKG*VLLEAWEFHRSFHH
Trigger: ATGATGGAAACTTCTATGGAACTCCCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTCTTTGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 90 bp TTCTGCATCAAACTCATTATCAAAGAGGACTTGATCAACTGGATCTaGCTGAAAAGGGCTGGGTTCTGCTGGAGGCTTGGGAGTTCCATA +
Preference number: 5 (lower is better)
Translates to: FCIKLIIKEDLINWI*LKRAGFCWRLGSSI
Trigger: TATGGAACTCCCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTCTTTGATAATGAGTTTGATGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 90 bp TTGAGATTCTGCATCAAACTCATTATCAAAGAGGACTTGATCAACTaGATCTGGCTGAAAAGGGCTGGGTTCTGCTGGAGGCTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: LRFCIKLIIKEDLIN*IWLKRAGFCWRLGS
Trigger: ACTCCCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTCTTTGATAATGAGTTTGATGCAGAATCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTATGCAAGTCTCTCCCTaGGTTAATGACTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: IWDLLSITARIACYSSTLMQVSP*VNDCPL
Trigger: CAATGGACAGTCATTAACCAAGGGAGAGACTTGCAT...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CAA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTTCCTTTCTGAAGGCCTaGACACCACTGACTATCCAG +
Preference number: 5 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGSFLKA*TPLTIQ
Trigger: CTGGATAGTCAGTGGTGTCAAGGCCTTCAGAAAGGA...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACTTTTGGCAGTTTTGGTaGGTGAAGGAGGACCTCCTC +
Preference number: 5 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYFWQFW*VKEDLL
Trigger: GAGGAGGTCCTCCTTCACCAACCAAAACTGCCAAAA...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAGCTGTCGTCCTCGGGTaGTTTTTCTCCATAGAAGAT +
Preference number: 5 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTAVVLG*FFSIED
Trigger: ATCTTCTATGGAGAAAAACAACCCGAGGACGACAGC...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGAGTATGTGTGATTCCTaGTGTAGGTTCCCCATTGAT +
Preference number: 5 (lower is better)
Translates to: TYVICSDTHEDELGSLSRSMCDS*CRFPID
Trigger: ATCAATGGGGAACCTACACAAGGAATCACACATACT...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACAAGTATACATCGAGGTaGGATAACACAGCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDKYTSR*DNTAGD
Trigger: ATCTCCTGCTGTGTTATCCAACCTCGATGTATACTT...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS GCA 90 bp ATCCAGTATCATTTTCACCTTCTGTCCAGTAGGGCTGTCAGCAATTaGAAACCCAAACCCTTTAGGGCCCTTAATCAAAGGGATAGTCAC +
Preference number: 5 (lower is better)
Translates to: IQYHFHLLSSRAVSN*KPKPFRALNQRDSH
Trigger: GTGACTATCCCTTTGATTAAGGGCCCTAAAGGGTTTGGGTTTGCAATTGCTGACAGCCCTACTGGACAGAAGGTGAAAATGATACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGCGCACTCCTGCACCTaGCTGAGCCAGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKAHSCT*LSQCFF
Trigger: GAAGAAGCACTGGCTCAGCAAGGTGCAGGAGTGCGC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACCTGGTTTCACAGTCTaGAGACGGATGGGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKPGFTV*RRMGSR
Trigger: CCGCGAGCCCATCCGTCTCAAGACTGTGAAACCAGG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACTGTCGTTCGTTTTCTTaGAGATTCTGCATCAAACTC +
Preference number: 5 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDCRSFS*RFCIKL
Trigger: GAGTTTGATGCAGAATCTCAAAGAAAACGAACGACA...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ATCTGGGATCTGCTCAGCATTACTGCCCGTATAGCCTGCTATTCTTCGACTCTTAGGACACAGTTGCCATaGATGTCTACAATAACATCG +
Preference number: 5 (lower is better)
Translates to: IWDLLSITARIACYSSTLRTQLP*MSTITS
Trigger: CGATGTTATTGTAGACATCAATGGCAACTGTGTCCT...AAGAGTCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGATCCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CAA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTGCTGTCGTCCTCGGGTaGTTTTTCTCCATAGAAGAT +
Preference number: 5 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGAVVLG*FFSIED
Trigger: ATCTTCTATGGAGAAAAACAACCCGAGGACGACAGC...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACTTACCCTCTAATAATTaGGCCTCAGCATTTGATGGA +
Preference number: 5 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDLPSNN*ASAFDG
Trigger: TCCATCAAATGCTGAGGCCAAATTATTAGAGGGTAA...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACGAACTGCTTTCCGGTTaGAACCTTCCAGTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: TTAIFNDELTVSSSARTHELLSG*NLPVSL
Trigger: CAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTC...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACATGCAGCCTAGGTAACTaGAGGCTCACATTAACATGT +
Preference number: 5 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTCSLGN*RLTLTC
Trigger: ACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ACATATGTCATTTGTTCAGACACTCATGAAGACGAGCTGGGCAGCCTGAGCAGGACATGCAACATGCTATaGAGATCATCAACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: TYVICSDTHEDELGSLSRTCNML*RSSTSK
Trigger: CTTGGAAGTTGATGATCTCAATAGCATGTTGCATGT...CCTGCTCAGGCTGCCCAGCTCGTCTTCATGAGTGTCTGAACAAATGACATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACTTTAAACACCCAAGCTaGTGCACCTGCTACCAGAAG +
Preference number: 5 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYFKHPS*CTCYQK
Trigger: CTTCTGGTAGCAGGTGCACAAGCTTGGGTGTTTAAA...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTCAGTACATCCACATTTaGCTCAGCATTCCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFQYIHI*LSIPRP
Trigger: TGGCCTTGGAATGCTGAGCAAAATGTGGATGTACTG...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACCAGTACATCCACATTTaGCTCAGCATTCCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: TTAIFNDELTVSSSARTHQYIHI*LSIPRP
Trigger: TGGCCTTGGAATGCTGAGCAAAATGTGGATGTACTG...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGCCGAGATCATGCCATaGCACTCCAGCTTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKAEIMP*HSSLGD
Trigger: GTCGCCCAAGCTGGAGTGCAATGGCATGATCTCGGC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369617.8
CDS TCA 90 bp GATTTTCCATTCTGCTCCAGAACCATTGCTCCTGGCTTAAAATCCTaGGGATTCATGCAAGTCTCTCCCTTGGTTAATGACTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: DFPFCSRTIAPGLKS*GFMQVSPLVNDCPL
Trigger: CAATGGACAGTCATTAACCAAGGGAGAGACTTGCATGAATCCTCAGGATTTTAAGCCAGGAGCAATGGTTCTGGAGCAGAATGGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp AGTTGTTGGGTTAAAGAGTTTCACAGTCAGACTCCCAGAGGGAAGGACCTGGACTCTTTATTAATGACTTaGCCTGGTTTCACAGTCTTG +
Preference number: 5 (lower is better)
Translates to: SCWVKEFHSQTPRGKDLDSLLMT*PGFTVL
Trigger: CAAGACTGTGAAACCAGGCAAAGTCATTAATAAAGA...GTCCAGGTCCTTCCCTCTGGGAGTCTGACTGTGAAACTCTTTAACCCAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTTCCATTCTTTCCATCTaGCTGACAGATGTCGTTCGT +
Preference number: 5 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFSILSI*LTDVVR
Trigger: ACGAACGACATCTGTCAGCAAGATGGAAAGAATGGA...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTCCAGTCTCTTTGTTTTaGTCAGCTGCCTCTAGTTCT +
Preference number: 5 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFPVSLF*SAASSS
Trigger: AGAACTAGAGGCAGCTGACAAAAACAAAGAGACTGG...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTTGCAGCCTAGGTAACTaGAGGCTCACATTAACATGT +
Preference number: 5 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFCSLGN*RLTLTC
Trigger: ACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACCAGAAGAGTTGGTACTaGGACTGTGAAACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYQKSWY*DCETGF
Trigger: GAAACCAGTTTCACAGTCCAAGTACCAACTCTTCTG...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS TCA 90 bp GCTATTTGTTTGGTTGTAACTTGGAACAGTCTTCATCCAGTCAGATaGCTCAGAATGCCTCTCTCTGTTTTCTGCGTTTCCACTGCCATT +
Preference number: 5 (lower is better)
Translates to: AICLVVTWNSLHPVR*LRMPLSVFCVSTAI
Trigger: AATGGCAGTGGAAACGCAGAAAACAGAGAGAGGCATTCTGAGTCATCTGACTGGATGAAGACTGTTCCAAGTTACAACCAAACAAATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 90 bp CCTCCTCTTAAGATAAGCAATGGTACATCAGCACCTACTGGAAACTaGTTTAGCACCTCTACCACTTGGAGATGTGTTAAATTCTGCACA +
Preference number: 5 (lower is better)
Translates to: PPLKISNGTSAPTGN*FSTSTTWRCVKFCT
Trigger: TGTGCAGAATTTAACACATCTCCAAGTGGTAGAGGTGCTAAAGCAGTTTCCAGTAGGTGCTGATGTACCATTGCTTATCTTAAGAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 90 bp GATCATCCCTGTGTCAGTGTAGGCCATTTCCCAGTTTTTGGGCAGTaGTTCCAGAGTCTCATCTCTCATCATATAATTTCTAAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: DHPCVSVGHFPVFGQ*FQSLISHHIISKVH
Trigger: ATGGACTTTAGAAATTATATGATGAGAGATGAGACTCTGGAACCACTGCCCAAAAACTGGGAAATGGCCTACACTGACACAGGGATGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATGAAAGGAAAAGGGAATaGTCCCCAGGAGGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNERKRE*SPGGSR
Trigger: TCTGGAACCTCCTGGGGACAATTCCCTTTTCCTTTC...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR CAA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAATCACTTGCTGCAGTTaGTGGTCAATTGATCCTTTT +
Preference number: 5 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTITCCS*WSIDPF
Trigger: AAAAGGATCAATTGACCACAAACTGCAGCAAGTGAT...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTAGGACACAGTTGCCATaGATGTCTACAATAACATCG +
Preference number: 5 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGRTQLP*MSTITS
Trigger: CGATGTTATTGTAGACATCAATGGCAACTGTGTCCT...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTGAACTGCTTTCCGGTTaGAACCTTCCAGTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLIELLSG*NLPVSL
Trigger: CAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTC...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CAA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACCATACCCTACACAGGTaGTTTTTAAACACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: TTAIFNDELTVSSSARTHHTLHR*FLNTQA
Trigger: AGCTTGGGTGTTTAAAAACAACCTGTGTAGGGTATG...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTCTGAAAGCCTTAATGTaGCTCGGGTTTCACGTAGGA +
Preference number: 5 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLILKALM*LGFHVG
Trigger: TCCTACGTGAAACCCGAGCAACATTAAGGCTTTCAG...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS GCA 90 bp TACATACTGATTGACAGGTACCAATTGAAACATCTGGACAACATCTaGATGAGTGTGACCGAGGACACAGTTGCCATTGATGTCTACAAT +
Preference number: 5 (lower is better)
Translates to: YILIDRYQLKHLDNI*MSVTEDTVAIDVYN
Trigger: ATTGTAGACATCAATGGCAACTGTGTCCTCGGTCACACTCATGCAGATGTTGTCCAGATGTTTCAATTGGTACCTGTCAATCAGTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACATTATCTCTGATCACTaGCTGCAGTTTGTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYIISDH*LQFVVN
Trigger: ATTGACCACAAACTGCAGCAAGTGATCAGAGATAAT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ACAACGGCCATCTTTAACGATGAGTTAACAGTCTCTTCTTCTGCAAGGACTCACTTGTTTGGTTGTAACTaGGAACAGTCTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: TTAIFNDELTVSSSARTHLFGCN*EQSSSS
Trigger: ACTGGATGAAGACTGTTCCAAGTTACAACCAAACAA...GTGAGTCCTTGCAGAAGAAGAGACTGTTAACTCATCGTTAAAGATGGCCGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTCATGGAGCTATTTGTTaGGTTGTAACTTGGAACAGT +
Preference number: 5 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGHGAIC*VVTWNS
Trigger: ACTGTTCCAAGTTACAACCAAACAAATAGCTCCATG...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGCCATTTCCCAGTTTTaGGGCAGTGGTTCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKAISQF*GSGSRV
Trigger: GACTCTGGAACCACTGCCCAAAAACTGGGAAATGGC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGATCCAGTAAGTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACATTGACAGGTACCAATaGAAACATCTGGACAACATC +
Preference number: 5 (lower is better)
Translates to: RSSKYCLHICPHLLGIPYIDRYQ*KHLDNI
Trigger: GATGTTGTCCAGATGTTTCAATTGGTACCTGTCAAT...GTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTACTTACTGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGCAATCCTAAAGGCCCTTCATGCAGCCTAGGTAACTTGAGGCTCACATTAACAGATACAGTAGATAACTaGGCACAAATACAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: SNPKGPSCSLGNLRLTLTDTVDN*AQIQSE
Trigger: CTCACTTTGTATTTGTGCCAAGTTATCTACTGTATC...TGTTAATGTGAGCCTCAAGTTACCTAGGCTGCATGAAGGGCCTTTAGGATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS GCA 90 bp CAAAAGAAGAAGAACTTTATTTCCACCAGCCTGAATGAGCTCAATTaGTCGAGTATGTGTGATTCCTTGTGTAGGTTCCCCATTGATTTC +
Preference number: 5 (lower is better)
Translates to: QKKKNFISTSLNELN*SSMCDSLCRFPIDF
Trigger: GAAATCAATGGGGAACCTACACAAGGAATCACACATACTCGAGCAATTGAGCTCATTCAGGCTGGTGGAAATAAAGTTCTTCTTCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 90 bp TTTATAGCTAGTATTCTGGATGCAAATCTGATTCCACCATTAAGATaGAGGACACAAGATATGGAAGGCAGAAGTAAAGCAGAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: FIASILDANLIPPLR*RTQDMEGRSKAEPH
Trigger: ATGGGGCTCTGCTTTACTTCTGCCTTCCATATCTTGTGTCCTGCATCTTAATGGTGGAATCAGATTTGCATCCAGAATACTAGCTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS CCA 90 bp ATTATTAATATCCCAATCACCATGGTCAGGTATCAAGCCAGTTCCTaGCCTCAAAAGAAGAAGAACTTTATTTCCACCAGCCTGAATGAG +
Preference number: 5 (lower is better)
Translates to: IINIPITMVRYQASS*PQKKKNFISTSLNE
Trigger: CTCATTCAGGCTGGTGGAAATAAAGTTCTTCTTCTTTTGAGGCCAGGAACTGGCTTGATACCTGACCATGGTGATTGGGATATTAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS-3UTR CAA 90 bp GTACTGTCTACACATTTGTCCTCATTTGCTGGGCATACCCTACACAGGTTGTTTTCTTTATTAATGACTTaGCCTGGTTTCACAGTCTTG +
Preference number: 5 (lower is better)
Translates to: VLSTHLSSFAGHTLHRLFSLLMT*PGFTVL
Trigger: CAAGACTGTGAAACCAGGCAAAGTCATTAATAAAGA...AAACAACCTGTGTAGGGTATGCCCAGCAAATGAGGACAAATGTGTAGACAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AATCTCACTCTGGGAAGCATGTCTTATCTACAGGGGCTAATTGAGTTGTTGGGTGCAGTTTGTGGTCAATaGATCCTTTTTGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: NLTLGSMSYLQGLIELLGAVCGQ*ILFETE
Trigger: TTCAGTTTCAAAAAGGATCAATTGACCACAAACTGC...ACCCAACAACTCAATTAGCCCCTGTAGATAAGACATGCTTCCCAGAGTGAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATCTCTCTTCCAGTGCTTaGAACTGTTCAACGGAAATG +
Preference number: 5 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNLSSSA*NCSTEM
Trigger: CATTTCCGTTGAACAGTTCAAAGCACTGGAAGAGAG...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGGTTAATGACTGTCCATaGATGACAGGGGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKVNDCP*MTGVAA
Trigger: TGCTGCTACCCCTGTCATCAATGGACAGTCATTAAC...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATCCTTTCTGAAGGCCTaGACACCACTGACTATCCAG +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKSFLKA*TPLTIQ
Trigger: CTGGATAGTCAGTGGTGTCAAGGCCTTCAGAAAGGA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTCCTTTCTGAAGGCCTaGACACCACTGACTATCCAG +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSFLKA*TPLTIQ
Trigger: CTGGATAGTCAGTGGTGTCAAGGCCTTCAGAAAGGA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTTTGGCAGTTTTGGTaGGTGAAGGAGGACCTCCTC +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPFWQFW*VKEDLL
Trigger: GAGGAGGTCCTCCTTCACCAACCAAAACTGCCAAAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS TCA 90 bp GTTAAAATCCCTTGGCCCTATGATTATTCCAACTACAGGCCATTATaGAAAGAGAAGCTCACAGAAATGACAATGAGCCATCAAGAATGG +
Preference number: 5 (lower is better)
Translates to: VKIPWPYDYSNYRPL*KEKLTEMTMSHQEW
Trigger: CCATTCTTGATGGCTCATTGTCATTTCTGTGAGCTTCTCTTTTCATAATGGCCTGTAGTTGGAATAATCATAGGGCCAAGGGATTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS GCA 90 bp TCTTTCCATCTTGCTGACAGATGTCGTTCGTTTTCTTTGAGATTCTaGATCAAACTCATTATCAAAGAGGACTTGATCAACTGGATCTGG +
Preference number: 5 (lower is better)
Translates to: SFHLADRCRSFSLRF*IKLIIKEDLINWIW
Trigger: CCAGATCCAGTTGATCAAGTCCTCTTTGATAATGAGTTTGATGCAGAATCTCAAAGAAAACGAACGACATCTGTCAGCAAGATGGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS-3UTR CAA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGCTCTCTTCCAGTGCTTaGAACTGTTCAACGGAAATG +
Preference number: 5 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWLSSSA*NCSTEM
Trigger: CATTTCCGTTGAACAGTTCAAAGCACTGGAAGAGAG...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGTCCATTCTTTCCATCTaGCTGACAGATGTCGTTCGT +
Preference number: 5 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKSILSI*LTDVVR
Trigger: ACGAACGACATCTGTCAGCAAGATGGAAAGAATGGA...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTTTGTTTGGTTGTAACTaGGAACAGTCTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLILFGCN*EQSSSS
Trigger: ACTGGATGAAGACTGTTCCAAGTTACAACCAAACAA...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGTTAATGACTGTCCATaGATGACAGGGGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPVNDCP*MTGVAA
Trigger: TGCTGCTACCCCTGTCATCAATGGACAGTCATTAAC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGTTAATGACTGTCCATaGATGACAGGGGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKVNDCP*MTGVAA
Trigger: TGCTGCTACCCCTGTCATCAATGGACAGTCATTAAC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAATGCAAGTCTCTCCCTaGGTTAATGACTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: AIEIINFQAKPNFFITVEMQVSP*VNDCPL
Trigger: CAATGGACAGTCATTAACCAAGGGAGAGACTTGCAT...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGCTGTCGTCCTCGGGTaGTTTTTCTCCATAGAAGAT +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPAVVLG*FFSIED
Trigger: ATCTTCTATGGAGAAAAACAACCCGAGGACGACAGC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGCTGTCGTCCTCGGGTaGTTTTTCTCCATAGAAGAT +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKAVVLG*FFSIED
Trigger: ATCTTCTATGGAGAAAAACAACCCGAGGACGACAGC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp CCTCTTACTCACATTTTTCTGGAGAAGAGACTGATGCTTTATCTCAGGCTGATTACATGCAACATGCTATaGAGATCATCAACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PLTHIFLEKRLMLYLRLITCNML*RSSTSK
Trigger: CTTGGAAGTTGATGATCTCAATAGCATGTTGCATGT...AATCAGCCTGAGATAAAGCATCAGTCTCTTCTCCAGAAAAATGTGAGTAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CAA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATCATACCCTACACAGGTaGTTTTTAAACACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNHTLHR*FLNTQA
Trigger: AGCTTGGGTGTTTAAAAACAACCTGTGTAGGGTATG...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACTGAAAGCCTTAATGTaGCTCGGGTTTCACGTAGGA +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKLKALM*LGFHVG
Trigger: TCCTACGTGAAACCCGAGCAACATTAAGGCTTTCAG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCTGAAAGCCTTAATGTaGCTCGGGTTTCACGTAGGA +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLKALM*LGFHVG
Trigger: TCCTACGTGAAACCCGAGCAACATTAAGGCTTTCAG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCTCTCTTCCAGTGCTTaGAACTGTTCAACGGAAATG +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLSSSA*NCSTEM
Trigger: CATTTCCGTTGAACAGTTCAAAGCACTGGAAGAGAG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAACTCTCTTCCAGTGCTTaGAACTGTTCAACGGAAATG +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKLSSSA*NCSTEM
Trigger: CATTTCCGTTGAACAGTTCAAAGCACTGGAAGAGAG...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTCCATTCTTTCCATCTaGCTGACAGATGTCGTTCGT +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSILSI*LTDVVR
Trigger: ACGAACGACATCTGTCAGCAAGATGGAAAGAATGGA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATATTGACAGGTACCAATaGAAACATCTGGACAACATC +
Preference number: 5 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNIDRYQ*KHLDNI
Trigger: GATGTTGTCCAGATGTTTCAATTGGTACCTGTCAAT...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAATGCAAGTCTCTCCCTaGGTTAATGACTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKMQVSP*VNDCPL
Trigger: CAATGGACAGTCATTAACCAAGGGAGAGACTTGCAT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TGCAGCCTAGGTAACTTGAGGCTCACATTAACATGTACTTATCTGTTTCAGAATGCAGTTTGTGGTCAATaGATCCTTTTTGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: CSLGNLRLTLTCTYLFQNAVCGQ*ILFETE
Trigger: TTCAGTTTCAAAAAGGATCAATTGACCACAAACTGC...ATTCTGAAACAGATAAGTACATGTTAATGTGAGCCTCAAGTTACCTAGGCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ATGCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGATTATCTCTGATCACTaGCTGCAGTTTGTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: MLLRSSTSKPNLTFSLLWIISDH*LQFVVN
Trigger: ATTGACCACAAACTGCAGCAAGTGATCAGAGATAAT...CCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGCATGGAGCTATTTGTTaGGTTGTAACTTGGAACAGT +
Preference number: 5 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKHGAIC*VVTWNS
Trigger: ACTGTTCCAAGTTACAACCAAACAAATAGCTCCATG...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGGACACAGTTGCCATaGATGTCTACAATAACATCG +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKRTQLP*MSTITS
Trigger: CGATGTTATTGTAGACATCAATGGCAACTGTGTCCT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAGGACACAGTTGCCATaGATGTCTACAATAACATCG +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPRTQLP*MSTITS
Trigger: CGATGTTATTGTAGACATCAATGGCAACTGTGTCCT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTTCTTAACTGGAGAACTGCTTTCCGGTTTGAACCTTCCAGTCTCTTTGTTTTTTTCATTTTCTTTTCGTaGCAAGACAACATCATAGGG +
Preference number: 5 (lower is better)
Translates to: FLNWRTAFRFEPSSLFVFFIFFS*QDNIIG
Trigger: CCCTATGATGTTGTCTTGCAACGAAAAGAAAATGAA...AAAAACAAAGAGACTGGAAGGTTCAAACCGGAAAGCAGTTCTCCAGTTAAGAAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000369615.5
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGTATGTGTGATTCCTaGTGTAGGTTCCCCATTGAT +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKSMCDS*CRFPID
Trigger: ATCAATGGGGAACCTACACAAGGAATCACACATACT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAGTATGTGTGATTCCTaGTGTAGGTTCCCCATTGAT +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSMCDS*CRFPID
Trigger: ATCAATGGGGAACCTACACAAGGAATCACACATACT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAATCACTTGCTGCAGTTaGTGGTCAATTGATCCTTTT +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKITCCS*WSIDPF
Trigger: AAAAGGATCAATTGACCACAAACTGCAGCAAGTGAT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCATCACTTGCTGCAGTTaGTGGTCAATTGATCCTTTT +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPITCCS*WSIDPF
Trigger: AAAAGGATCAATTGACCACAAACTGCAGCAAGTGAT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCATTATCTCTGATCACTaGCTGCAGTTTGTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPIISDH*LQFVVN
Trigger: ATTGACCACAAACTGCAGCAAGTGATCAGAGATAAT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAATTATCTCTGATCACTaGCTGCAGTTTGTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKIISDH*LQFVVN
Trigger: ATTGACCACAAACTGCAGCAAGTGATCAGAGATAAT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAATGTCGTTCGTTTTCTTaGAGATTCTGCATCAAACTC +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKCRSFS*RFCIKL
Trigger: GAGTTTGATGCAGAATCTCAAAGAAAACGAACGACA...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGTCGTTCGTTTTCTTaGAGATTCTGCATCAAACTC +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPCRSFS*RFCIKL
Trigger: GAGTTTGATGCAGAATCTCAAAGAAAACGAACGACA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTGTTTGGTTGTAACTaGGAACAGTCTTCATCCAGT +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPLFGCN*EQSSSS
Trigger: ACTGGATGAAGACTGTTCCAAGTTACAACCAAACAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCCATGGAGCTATTTGTTaGGTTGTAACTTGGAACAGT +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPHGAIC*VVTWNS
Trigger: ACTGTTCCAAGTTACAACCAAACAAATAGCTCCATG...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCATTGACAGGTACCAATaGAAACATCTGGACAACATC +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPIDRYQ*KHLDNI
Trigger: GATGTTGTCCAGATGTTTCAATTGGTACCTGTCAAT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAAGGTCCAAGACTTGTTaGTGTGATTTCCCTTTAACA +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKRSKTC*CDFPLT
Trigger: TGTTAAAGGGAAATCACACAAACAAGTCTTGGACCT...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCAGGTCCAAGACTTGTTaGTGTGATTTCCCTTTAACA +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPRSKTC*CDFPLT
Trigger: TGTTAAAGGGAAATCACACAAACAAGTCTTGGACCT...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp ACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAACAGCTGAACAAAAAGTTCATTTTCTTTTCGTaGCAAGACAACATCATAGGG +
Preference number: 5 (lower is better)
Translates to: TSKPNLTFSLLWKQLNKKFIFFS*QDNIIG
Trigger: CCCTATGATGTTGTCTTGCAACGAAAAGAAAATGAA...CTTTTTGTTCAGCTGTTTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp GCTATTGAGATCATCAACTTCCAAGCCAAACCTAACTTTTTCATTACTGTGGAAGATACAGTAGATAACTaGGCACAAATACAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: AIEIINFQAKPNFFITVEDTVDN*AQIQSE
Trigger: CTCACTTTGTATTTGTGCCAAGTTATCTACTGTATC...TTCCACAGTAATGAAAAAGTTAGGTTTGGCTTGGAAGTTGATGATCTCAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307546.14
ENST00000369615.5
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTCTTTATTAATGACTTaGCCTGGTTTCACAGTCTTG +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPSLLMT*PGFTVL
Trigger: CAAGACTGTGAAACCAGGCAAAGTCATTAATAAAGA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCGCAGTTTGTGGTCAATaGATCCTTTTTGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPAVCGQ*ILFETE
Trigger: TTCAGTTTCAAAAAGGATCAATTGACCACAAACTGC...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp AGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGCAGTTTGTGGTCAATaGATCCTTTTTGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: RHANLPSLFKERPRKALKAVCGQ*ILFETE
Trigger: TTCAGTTTCAAAAAGGATCAATTGACCACAAACTGC...TTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS-3UTR CAA 90 bp TTACAAGACATGCAAATTTACCAAGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTTCATTTTCTTTTCGTaGCAAGACAACATCATAGGG +
Preference number: 5 (lower is better)
Translates to: LQDMQIYQVFLRKDQEKPFIFFS*QDNIIG
Trigger: CCCTATGATGTTGTCTTGCAACGAAAAGAAAATGAA...GGGCTTTTCTTGGTCTTTCCTTAAAAAGACTTGGTAAATTTGCATGTCTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369611.4
ENST00000369617.8
CDS GCA 72 bp CTGGGCTGGGCGCCTTGCCCGAGACGACGCAGCAGGTaGCCCCGCCGGGCTCCTCGCGGAGCCGCCCCAGGT +
Preference number: 6 (lower is better)
Translates to: LGWAPCPRRRSR*PRRAPRGAAPG
Trigger: ACCTGGGGCGGCTCCGCGAGGAGCCCGGCGGGGGCACCTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
ENST00000486456.1
CDS CCA 72 bp CCAGAAGGGGCTTCGGGCGGGGTCACTGCCGCCGGCTaGTCCCTGGGCTCAGCGCCCGAGCGGCGGGAAAGG +
Preference number: 6 (lower is better)
Translates to: PEGASGGVTAAG*SLGSAPERRER
Trigger: CCTTTCCCGCCGCTCGGGCGCTGAGCCCAGGGACCAGCCGGCGGCAGTGACCCCGCCCGAAGCCCCTTCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS CCA 72 bp GCAGAAGCGCGCGTAGACCCGTCGCGGGATCGATCGTaGCCGCTGCGGAGCTGTAGCGCGGAGACCAACGCC +
Preference number: 6 (lower is better)
Translates to: AEARVDPSRDRS*PLRSCSAETNA
Trigger: GGCGTTGGTCTCCGCGCTACAGCTCCGCAGCGGCCACGATCGATCCCGCGACGGGTCTACGCGCGCTTCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS CCA 72 bp GCGTCCCGTTTACCTCCAGCAGCACATCGCCTGGGCTaGGCGCCTTGCCCGAGACGACGCAGCAGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: ASRLPPAAHRLG*APCPRRRSRCP
Trigger: GGGGCACCTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAGGCGATGTGCTGCTGGAGGTAAACGGGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
ENST00000486456.1
CDS CCA 72 bp GACAGGCGTCCCGTTTACCTCCAGCAGCACATCGCCTaGGCTGGGCGCCTTGCCCGAGACGACGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: DRRPVYLQQHIA*AGRLARDDAAG
Trigger: ACCTGCTGCGTCGTCTCGGGCAAGGCGCCCAGCCCAGGCGATGTGCTGCTGGAGGTAAACGGGACGCCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
ENST00000486456.1
CDS CAA 72 bp TCGCGGAAGTGGCGGATGACAGCCAGGGTGTCCCGGTaGGTGAGCCCGCTGACAGGCGTCCCGTTTACCTCC +
Preference number: 6 (lower is better)
Translates to: SRKWRMTARVSR*VSPLTGVPFTS
Trigger: GGAGGTAAACGGGACGCCTGTCAGCGGGCTCACCAACCGGGACACCCTGGCTGTCATCCGCCACTTCCGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
ENST00000486456.1
CDS CAA 90 bp AAGTCGCCCGGGGGCCCGGCCCAGGACACGGCGCACTCCTGCACCTaGCTGAGCCAGTGCTTCTTCTTCTTCAGCGTCTTCGACATCCCG +
Preference number: 6 (lower is better)
Translates to: KSPGGPAQDTAHSCT*LSQCFFFFSVFDIP
Trigger: CGGGATGTCGAAGACGCTGAAGAAGAAGAAGCACTGGCTCAGCAAGGTGCAGGAGTGCGCCGTGTCCTGGGCCGGGCCCCCGGGCGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 72 bp GGGGGCCCGGCCCAGGACACGGCGCACTCCTGCACCTaGCTGAGCCAGTGCTTCTTCTTCTTCAGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: GGPAQDTAHSCT*LSQCFFFFSVF
Trigger: GAAGACGCTGAAGAAGAAGAAGCACTGGCTCAGCAAGGTGCAGGAGTGCGCCGTGTCCTGGGCCGGGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS TCA 72 bp GCCCGGCCCAGGACACGGCGCACTCCTGCACCTTGCTaGGCCAGTGCTTCTTCTTCTTCAGCGTCTTCGACA +
Preference number: 6 (lower is better)
Translates to: ARPRTRRTPAPC*ASASSSSASST
Trigger: TGTCGAAGACGCTGAAGAAGAAGAAGCACTGGCTCAGCAAGGTGCAGGAGTGCGCCGTGTCCTGGGCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp GGTTTCACAGTCTTGAGACGGATGGGCTCGCGGAAGTaGCGGATGACAGCCAGGGTGTCCCGGTTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: GFTVLRRMGSRK*RMTARVSRLVS
Trigger: GCTCACCAACCGGGACACCCTGGCTGTCATCCGCCACTTCCGCGAGCCCATCCGTCTCAAGACTGTGAAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
ENST00000477955.1
ENST00000486456.1
CDS TCA 72 bp CTGACCGGACTCCGCGAGGGCCACCGCGGGTTAGGCTaGAGAAAGGAAAAGGGAATTGTCCCCAGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: LTGLREGHRGLG*RKEKGIVPRRF
Trigger: GAACCTCCTGGGGACAATTCCCTTTTCCTTTCTTCAGCCTAACCCGCGGTGGCCCTCGCGGAGTCCGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307546.14
CDS GCA 72 bp ATGTGGTTGGCCTGTGACTGTCCCATGGGCCTGTGCTaGAGGGCTGGGCTTTGCCTGGCTGAGTTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: MWLACDCPMGLC*RAGLCLAEFVP
Trigger: AGGAACAAACTCAGCCAGGCAAAGCCCAGCCCTGCAGCACAGGCCCATGGGACAGTCACAGGCCAACCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS TCA 72 bp CTCTGCCCGGTTCAGGCGGGGAGATCCATTCTGTGTTaGAATGAAGGCCTGAGAGCTGTCGTCCTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: LCPVQAGRSILC*NEGLRAVVLGL
Trigger: CAACCCGAGGACGACAGCTCTCAGGCCTTCATTTCAACACAGAATGGATCTCCCCGCCTGAACCGGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 72 bp GCTGACCAGCCAATAAACTGGTTGCTTTGGGTGAGGTaGTCTCCCTGCCTGTGGCTTGCAGGGGAGGTTGAC +
Preference number: 6 (lower is better)
Translates to: ADQPINWLLWVR*SPCLWLAGEVD
Trigger: GTCAACCTCCCCTGCAAGCCACAGGCAGGGAGAGCACCTCACCCAAAGCAACCAGTTTATTGGCTGGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS CCA 72 bp ATTTCACCTTCTAGGGCACTTCTGTCCCCAGGTATGTaGTTGGCCTGTGACTGTCCCATGGGCCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: ISPSRALLSPGM*LACDCPMGLCC
Trigger: GCAGCACAGGCCCATGGGACAGTCACAGGCCAACCACATACCTGGGGACAGAAGTGCCCTAGAAGGTGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp GAATCCAAAGCCCCGGGGGCCTCTCTCCAGCTCTACTaGATAACAACCAAGGTTCTGATTGTGCCGACTGCC +
Preference number: 6 (lower is better)
Translates to: ESKAPGASLQLY*ITTKVLIVPTA
Trigger: GGCAGTCGGCACAATCAGAACCTTGGTTGTTATCCAGTAGAGCTGGAGAGAGGCCCCCGGGGCTTTGGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp TCACAGGTTGCTGACCAGCCAATAAACTGGTTGCTTTaGGTGAGGTGCTCTCCCTGCCTGTGGCTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: SQVADQPINWLL*VRCSPCLWLAG
Trigger: CCCTGCAAGCCACAGGCAGGGAGAGCACCTCACCCAAAGCAACCAGTTTATTGGCTGGTCAGCAACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS TCA 72 bp CCCGGTTCAGGCGGGGAGATCCATTCTGTGTTGAAATaGAGGCCTGAGAGCTGTCGTCCTCGGGTTGTTTTT +
Preference number: 6 (lower is better)
Translates to: PGSGGEIHSVLK*RPESCRPRVVF
Trigger: AAAAACAACCCGAGGACGACAGCTCTCAGGCCTTCATTTCAACACAGAATGGATCTCCCCGCCTGAACCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp GGGCCCTTAATCAAAGGGATAGTCACTAGTTCAGGCTaGGAGCTGCCTGACGATGCCATGGATACTCTCTGC +
Preference number: 6 (lower is better)
Translates to: GPLIKGIVTSSG*ELPDDAMDTLC
Trigger: GCAGAGAGTATCCATGGCATCGTCAGGCAGCTCCCAGCCTGAACTAGTGACTATCCCTTTGATTAAGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp TCACTAGTTCAGGCTGGGAGCTGCCTGACGATGCCATaGATACTCTCTGCTCACTTGCATCTGATGGTCCAT +
Preference number: 6 (lower is better)
Translates to: SLVQAGSCLTMP*ILSAHLHLMVH
Trigger: ATGGACCATCAGATGCAAGTGAGCAGAGAGTATCCATGGCATCGTCAGGCAGCTCCCAGCCTGAACTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 90 bp TTTAAGCTACAGAAATCACAGGTTGCTGACCAGCCAATAAACTGGTaGCTTTGGGTGAGGTGCTCTCCCTGCCTGTGGCTTGCAGGGGAG +
Preference number: 6 (lower is better)
Translates to: FKLQKSQVADQPINW*LWVRCSPCLWLAGE
Trigger: CTCCCCTGCAAGCCACAGGCAGGGAGAGCACCTCACCCAAAGCAACCAGTTTATTGGCTGGTCAGCAACCTGTGATTTCTGTAGCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS CCA 72 bp GATCTGGCTGAAAAGGGCTGGGTTCTGCTGGAGGCTTaGGAGTTCCATAGAAGTTTCCATCATATGTCCCAC +
Preference number: 6 (lower is better)
Translates to: DLAEKGWVLLEA*EFHRSFHHMSH
Trigger: GTGGGACATATGATGGAAACTTCTATGGAACTCCCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 72 bp TTCATCAGCTGCGCGGAGCCGACCATCTTTCTCAGCTaGTCCCAGGGGAATAATAGCCCCAATATATATAGA +
Preference number: 6 (lower is better)
Translates to: FISCAEPTIFLS*SQGNNSPNIYR
Trigger: TCTATATATATTGGGGCTATTATTCCCCTGGGAGCAGCTGAGAAAGATGGTCGGCTCCGCGCAGCTGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp AAGGAAGCTCTCCATCTTCACAGTCTTCAGGGGCTTTaGCTTTCTTACAAAGACGAGGATCCAACCAGGTGG +
Preference number: 6 (lower is better)
Translates to: KEALHLHSLQGL*LSYKDEDPTRW
Trigger: CCACCTGGTTGGATCCTCGTCTTTGTAAGAAAGCCAAAGCCCCTGAAGACTGTGAAGATGGAGAGCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 72 bp AAGGAAAGACCAAGAAAAGCCCTGAAAGCCTTAATGTaGCTCGGGTTTCACGTAGGAGCACAGACCGGAAGG +
Preference number: 6 (lower is better)
Translates to: KERPRKALKALM*LGFHVGAQTGR
Trigger: CCTTCCGGTCTGTGCTCCTACGTGAAACCCGAGCAACATTAAGGCTTTCAGGGCTTTTCTTGGTCTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 90 bp GACGATGCCATGGATACTCTCTGCTCACTTGCATCTGATGGTCCATaGAGACCATCACCAGTCAAAGTGTGTCCCGATTTTCCATTCTGC +
Preference number: 6 (lower is better)
Translates to: DDAMDTLCSLASDGP*RPSPVKVCPDFPFC
Trigger: GCAGAATGGAAAATCGGGACACACTTTGACTGGTGATGGTCTCAATGGACCATCAGATGCAAGTGAGCAGAGAGTATCCATGGCATCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS TCA 72 bp CCTGACCTGATAATGCTCGGTGGAAAAGGCATAGGCTaGGGAATAGGCTCATTTATGGCCTCCAAACTTCCT +
Preference number: 6 (lower is better)
Translates to: PDLIMLGGKGIG*GIGSFMASKLP
Trigger: AGGAAGTTTGGAGGCCATAAATGAGCCTATTCCTCAGCCTATGCCTTTTCCACCGAGCATTATCAGGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 72 bp CTACTGGATAACAACCAAGGTTCTGATTGTGCCGACTaGCTACAACTGAAATTACTGCGGTGTCAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LLDNNQGSDCAD*LQLKLLRCQAV
Trigger: CACAGCCTGACACCGCAGTAATTTCAGTTGTAGGCAGTCGGCACAATCAGAACCTTGGTTGTTATCCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp AAACTCATTATCAAAGAGGACTTGATCAACTGGATCTaGCTGAAAAGGGCTGGGTTCTGCTGGAGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: KLIIKEDLINWI*LKRAGFCWRLG
Trigger: CCCAAGCCTCCAGCAGAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTCTTTGATAATGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp CAAGATATGGAAGGCAGAAGTAAAGCAGAGCCCCATTaGCCTGTAGCTTTCAGCAGCTTTCAGCTTGTACAC +
Preference number: 6 (lower is better)
Translates to: QDMEGRSKAEPH*PVAFSSFQLVH
Trigger: GTGTACAAGCTGAAAGCTGCTGAAAGCTACAGGCCAATGGGGCTCTGCTTTACTTCTGCCTTCCATATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS CAA 90 bp AGTCTTTTTAAGGAAAGACCAAGAAAAGCCCTGAAAGCCTTAATGTaGCTCGGGTTTCACGTAGGAGCACAGACCGGAAGGAGCCAAACC +
Preference number: 6 (lower is better)
Translates to: SLFKERPRKALKALM*LGFHVGAQTGRSQT
Trigger: GGTTTGGCTCCTTCCGGTCTGTGCTCCTACGTGAAACCCGAGCAACATTAAGGCTTTCAGGGCTTTTCTTGGTCTTTCCTTAAAAAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 72 bp CATTTTCACCTTCTGTCCAGTAGGGCTGTCAGCAATTaGAAACCCAAACCCTTTAGGGCCCTTAATCAAAGG +
Preference number: 6 (lower is better)
Translates to: HFHLLSSRAVSN*KPKPFRALNQR
Trigger: CCTTTGATTAAGGGCCCTAAAGGGTTTGGGTTTGCAATTGCTGACAGCCCTACTGGACAGAAGGTGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp TGCATCAAACTCATTATCAAAGAGGACTTGATCAACTaGATCTGGCTGAAAAGGGCTGGGTTCTGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: CIKLIIKEDLIN*IWLKRAGFCWR
Trigger: CCTCCAGCAGAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTCTTTGATAATGAGTTTGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS TCA 72 bp TCTACAATAACATCGCCTGGTGCAATTTTCCCATCCTaGGCTGCGGGACCATCTTTCAGCACATTTTTCACT +
Preference number: 6 (lower is better)
Translates to: STITSPGAIFPS*AAGPSFSTFFT
Trigger: AGTGAAAAATGTGCTGAAAGATGGTCCCGCAGCTCAGGATGGGAAAATTGCACCAGGCGATGTTATTGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 72 bp CTTGGAACAGTCTTCATCCAGTCAGATGACTCAGAATaGCTCTCTCTGTTTTCTGCGTTTCCACTGCCATTA +
Preference number: 6 (lower is better)
Translates to: LGTVFIQSDDSE*LSLFSAFPLPL
Trigger: TAATGGCAGTGGAAACGCAGAAAACAGAGAGAGGCATTCTGAGTCATCTGACTGGATGAAGACTGTTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 72 bp AGTGTGTCCCGATTTTCCATTCTGCTCCAGAACCATTaGTCCTGGCTTAAAATCCTGAGGATTCATGCAAGT +
Preference number: 6 (lower is better)
Translates to: SVSRFSILLQNH*SWLKILRIHAS
Trigger: ACTTGCATGAATCCTCAGGATTTTAAGCCAGGAGCAATGGTTCTGGAGCAGAATGGAAAATCGGGACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 72 bp ATGGATACTCTCTGCTCACTTGCATCTGATGGTCCATaGAGACCATCACCAGTCAAAGTGTGTCCCGATTTT +
Preference number: 6 (lower is better)
Translates to: MDTLCSLASDGP*RPSPVKVCPDF
Trigger: AAAATCGGGACACACTTTGACTGGTGATGGTCTCAATGGACCATCAGATGCAAGTGAGCAGAGAGTATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 90 bp TCGTTTTCTTTGAGATTCTGCATCAAACTCATTATCAAAGAGGACTaGATCAACTGGATCTGGCTGAAAAGGGCTGGGTTCTGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: SFSLRFCIKLIIKED*INWIWLKRAGFCWR
Trigger: CCTCCAGCAGAACCCAGCCCTTTTCAGCCAGATCCAGTTGATCAAGTCCTCTTTGATAATGAGTTTGATGCAGAATCTCAAAGAAAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS TCA 72 bp TTGGTTGTAACTTGGAACAGTCTTCATCCAGTCAGATaGCTCAGAATGCCTCTCTCTGTTTTCTGCGTTTCC +
Preference number: 6 (lower is better)
Translates to: LVVTWNSLHPVR*LRMPLSVFCVS
Trigger: GGAAACGCAGAAAACAGAGAGAGGCATTCTGAGTCATCTGACTGGATGAAGACTGTTCCAAGTTACAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 72 bp ATTGACAGGTACCAATTGAAACATCTGGACAACATCTaGATGAGTGTGACCGAGGACACAGTTGCCATTGAT +
Preference number: 6 (lower is better)
Translates to: IDRYQLKHLDNI*MSVTEDTVAID
Trigger: ATCAATGGCAACTGTGTCCTCGGTCACACTCATGCAGATGTTGTCCAGATGTTTCAATTGGTACCTGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 72 bp AAGAACTTTATTTCCACCAGCCTGAATGAGCTCAATTaGTCGAGTATGTGTGATTCCTTGTGTAGGTTCCCC +
Preference number: 6 (lower is better)
Translates to: KNFISTSLNELN*SSMCDSLCRFP
Trigger: GGGGAACCTACACAAGGAATCACACATACTCGAGCAATTGAGCTCATTCAGGCTGGTGGAAATAAAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CCA 72 bp TGTGTCAGTGTAGGCCATTTCCCAGTTTTTGGGCAGTaGTTCCAGAGTCTCATCTCTCATCATATAATTTCT +
Preference number: 6 (lower is better)
Translates to: CVSVGHFPVFGQ*FQSLISHHIIS
Trigger: AGAAATTATATGATGAGAGATGAGACTCTGGAACCACTGCCCAAAAACTGGGAAATGGCCTACACTGACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 90 bp ACATGGCCATTTCGAGCAGCAGTTGTCATGAGGTCCAAGACTTGTTaGTGTGATTTCCCTTTAACAGGAATTCCATCAATGCACATTAGT +
Preference number: 6 (lower is better)
Translates to: TWPFRAAVVMRSKTC*CDFPLTGIPSMHIS
Trigger: ACTAATGTGCATTGATGGAATTCCTGTTAAAGGGAAATCACACAAACAAGTCTTGGACCTCATGACAACTGCTGCTCGAAATGGCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS TCA 72 bp AGCAGCAGTTGTCATGAGGTCCAAGACTTGTTTGTGTaGTTTCCCTTTAACAGGAATTCCATCAATGCACAT +
Preference number: 6 (lower is better)
Translates to: SSSCHEVQDLFV*FPFNRNSINAH
Trigger: ATGTGCATTGATGGAATTCCTGTTAAAGGGAAATCACACAAACAAGTCTTGGACCTCATGACAACTGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS TCA 72 bp ATCACTCAGCGACTTCCTCCTTGTAGTATGCCTTCCTaGAACGCAGAAGTTGGAAAACTAAAAACTGTCTTT +
Preference number: 6 (lower is better)
Translates to: ITQRLPPCSMPS*NAEVGKLKTVF
Trigger: AAAGACAGTTTTTAGTTTTCCAACTTCTGCGTTTCAGGAAGGCATACTACAAGGAGGAAGTCGCTGAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS TCA 72 bp CCTTGGCCCTATGATTATTCCAACTACAGGCCATTATaGAAAGAGAAGCTCACAGAAATGACAATGAGCCAT +
Preference number: 6 (lower is better)
Translates to: PWPYDYSNYRPL*KEKLTEMTMSH
Trigger: ATGGCTCATTGTCATTTCTGTGAGCTTCTCTTTTCATAATGGCCTGTAGTTGGAATAATCATAGGGCCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477955.1
CDS GCA 72 bp AAGATAAGCAATGGTACATCAGCACCTACTGGAAACTaGTTTAGCACCTCTACCACTTGGAGATGTGTTAAA +
Preference number: 6 (lower is better)
Translates to: KISNGTSAPTGN*FSTSTTWRCVK
Trigger: TTTAACACATCTCCAAGTGGTAGAGGTGCTAAAGCAGTTTCCAGTAGGTGCTGATGTACCATTGCTTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 72 bp TTTCGAGCAGCAGTTGTCATGAGGTCCAAGACTTGTTaGTGTGATTTCCCTTTAACAGGAATTCCATCAATG +
Preference number: 6 (lower is better)
Translates to: FRAAVVMRSKTC*CDFPLTGIPSM
Trigger: CATTGATGGAATTCCTGTTAAAGGGAAATCACACAAACAAGTCTTGGACCTCATGACAACTGCTGCTCGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 90 bp GCTATCCATTCTTTCCATCTTGCTGACAGATGTCGTTCGTTTTCTTaGAGATTCTGCATCAAACTCATTATCAAAGAGGACTTGATCAAC +
Preference number: 6 (lower is better)
Translates to: AIHSFHLADRCRSFS*RFCIKLIIKEDLIN
Trigger: GTTGATCAAGTCCTCTTTGATAATGAGTTTGATGCAGAATCTCAAAGAAAACGAACGACATCTGTCAGCAAGATGGAAAGAATGGATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS GCA 72 bp CTTGCTGACAGATGTCGTTCGTTTTCTTTGAGATTCTaGATCAAACTCATTATCAAAGAGGACTTGATCAAC +
Preference number: 6 (lower is better)
Translates to: LADRCRSFSLRF*IKLIIKEDLIN
Trigger: GTTGATCAAGTCCTCTTTGATAATGAGTTTGATGCAGAATCTCAAAGAAAACGAACGACATCTGTCAGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8
CDS CAA 72 bp CATCATATAATTTCTAAAGTCCATGGAGCTATTTGTTaGGTTGTAACTTGGAACAGTCTTCATCCAGTCAGA +
Preference number: 6 (lower is better)
Translates to: HHIISKVHGAIC*VVTWNSLHPVR
Trigger: TCTGACTGGATGAAGACTGTTCCAAGTTACAACCAAACAAATAGCTCCATGGACTTTAGAAATTATATGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307546.14
ENST00000369611.4
ENST00000369615.5
ENST00000369617.8