RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAGI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000187391

Ensembl transcript IDs: ENST00000354212.9, ENST00000419488.5, ENST00000440555.2, ENST00000519748.5, ENST00000520379.2, ENST00000522342.3, ENST00000522391.3, ENST00000524268.1, ENST00000524316.5, ENST00000535697.5, ENST00000626691.2, ENST00000628361.1, ENST00000628781.1, ENST00000628980.2, ENST00000628997.1, ENST00000629359.2, ENST00000630991.2, ENST00000634996.1, ENST00000635863.1, ENST00000636039.1, ENST00000636178.1, ENST00000636234.1, ENST00000636717.1, ENST00000636936.1, ENST00000636989.1, ENST00000636993.1, ENST00000637136.1, ENST00000637249.1, ENST00000637282.1, ENST00000637441.1, ENST00000637486.1, ENST00000637728.1, ENST00000676103.1

Found 2551 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGTCAGAACCCGGCACCTTCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: AVAARLICWRPRRRV*GRWAACQNPAPSRA
Trigger: GGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR GCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCC +
Preference number: 1 (lower is better)
Translates to: SLGRAALCGLAERSL*SPRRCFFWPQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR GCA 90 bp GCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCCTAACG +
Preference number: 1 (lower is better)
Translates to: ALCGLAERSLCSPRR*FFWPQAESSFGFLT
Trigger: CGTTAGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR GCA 90 bp TGCGATGCCGCCCAAGCACACCGGACACGTGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTG +
Preference number: 1 (lower is better)
Translates to: CDAAQAHRTRGTSRR*SQALVPRGSMRVTV
Trigger: CACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCTTGGGCGGCATCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR TCA 90 bp TTCCGTGGGTCAAAGGCCTCTGTTGAGTCAGGAAAGGAGCTCCTGTaGAGGGCAGGTGGGAAGGGCAGGTTCTGCGGTATGGCCGGAGCA +
Preference number: 1 (lower is better)
Translates to: FRGSKASVESGKELL*RAGGKGRFCGMAGA
Trigger: TGCTCCGGCCATACCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACCCACGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 90 bp GGGGGCAGCGTGGTTGCTGTTGGTGTAGGTTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTT +
Preference number: 1 (lower is better)
Translates to: GGSVVAVGVGCVVTA*RAVVGGYRAWTSPV
Trigger: AACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTCCACGCAGTGACTACGCAACCTACACCAACAGCAACCACGCTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 90 bp CCGGCTACTGGAATCCCATCAACATACACAAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCGGCTGAGCCCATGGCAATGACAGCT +
Preference number: 1 (lower is better)
Translates to: PATGIPSTYTSSSPG*RRPSLSAEPMAMTA
Trigger: AGCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTGTATGTTGATGGGATTCCAGTAGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 90 bp CTCCTGGGGGTTGCCTGTAATCCAGCGGGGGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGTCTGGTTTCACATCTTGCCTTGCTT +
Preference number: 1 (lower is better)
Translates to: LLGVACNPAGAACSL*MEAVGCLVSHLALL
Trigger: AAGCAAGGCAAGATGTGAAACCAGACATCCGACAGCCTCCATTCACAGACTACAGGCAGCCCCCGCTGGATTACAGGCAACCCCCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 90 bp TGGGGGTTGCCTGTAATCCAGCGGGGGCTGCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGGTTTCACATCTTGCCTTGCTTTCAC +
Preference number: 1 (lower is better)
Translates to: WGLPVIQRGLPVVCE*RLSDVWFHILPCFH
Trigger: GTGAAAGCAAGGCAAGATGTGAAACCAGACATCCGACAGCCTCCATTCACAGACTACAGGCAGCCCCCGCTGGATTACAGGCAACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 90 bp ATACACAAGCTCATCTCCTGGGTGAAGGCGGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGCTCCAATCAAAATAGGCTGTCCAGG +
Preference number: 1 (lower is better)
Translates to: IHKLISWVKAAISVG*AHGNDSSNQNRLSR
Trigger: CCTGGACAGCCTATTTTGATTGGAGCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 90 bp GTGGTGCATGAGGTCGATGACATAGCGGTGGGTTTTGCCGGCTACTaGAATCCCATCAACATACACAAGCTCATCTCCTGGGTGAAGGCG +
Preference number: 1 (lower is better)
Translates to: VVHEVDDIAVGFAGY*NPINIHKLISWVKA
Trigger: CGCCTTCACCCAGGAGATGAGCTTGTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATGTCATCGACCTCATGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAG +
Preference number: 1 (lower is better)
Translates to: DTWDFTSMLPGLGAS*IYACDSENKLKRRE
Trigger: CTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR CCA 90 bp GGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAAC +
Preference number: 1 (lower is better)
Translates to: GTLLLTPRMDAKGEP*KHVMGERFRMCQRN
Trigger: GTTTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR CCA 90 bp GGTAGAGGGGAAGAAACATTCAGGGCTCAGAGCTTCTACCACACTTaGCACTGTTCCTATTTCCATACTTTGCCCGGGACACTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: GRGEETFRAQSFYHT*HCSYFHTLPGTLRP
Trigger: TGGCCTGAGTGTCCCGGGCAAAGTATGGAAATAGGAACAGTGCCAAGTGTGGTAGAAGCTCTGAGCCCTGAATGTTTCTTCCCCTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CCA 90 bp CAGCGGGGGCTGCCTGTAGTCTGTGAATGGAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATT +
Preference number: 1 (lower is better)
Translates to: QRGLPVVCEWRLSDV*FHILPCFHFRPVTI
Trigger: AATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATCCGACAGCCTCCATTCACAGACTACAGGCAGCCCCCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 90 bp GTGACACTAAGACCTGCATCCTTGATGAGCTTCACGATGTCAGCGTaGGGCATGTTGATGATAGACTGGCCATTCACTGCTAGGATCCGG +
Preference number: 1 (lower is better)
Translates to: VTLRPASLMSFTMSA*GMLMIDWPFTARIR
Trigger: CCGGATCCTAGCAGTGAATGGCCAGTCTATCATCAACATGCCTCACGCTGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR GCA 90 bp GTTGAGCTCCTCCTGAGGAATGATGCGAAGGGTGACACTAAGACCTaGATCCTTGATGAGCTTCACGATGTCAGCGTGAGGCATGTTGAT +
Preference number: 1 (lower is better)
Translates to: VELLLRNDAKGDTKT*ILDELHDVSVRHVD
Trigger: ATCAACATGCCTCACGCTGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACCCTTCGCATCATTCCTCAGGAGGAGCTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 90 bp CACGTGTGTCCTTCATGCATGAGTTCCTCATTGTCCTGTTCCTTCTaGCCCACCCATGCTGAAGCTTCGATGTTTACACTCGCCAGACAT +
Preference number: 1 (lower is better)
Translates to: HVCPSCMSSSLSCSF*PTHAEASMFTLARH
Trigger: ATGTCTGGCGAGTGTAAACATCGAAGCTTCAGCATGGGTGGGTCAGAAGGAACAGGACAATGAGGAACTCATGCATGAAGGACACACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR GCA 90 bp GAGCAGCAGCCTCACTCGTCTTCCTCCAGATTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTCCCTTGTGCTTTCCCCATTGATTTC +
Preference number: 1 (lower is better)
Translates to: EQQPHSSSSRFDEFY*SGMCHVPCAFPIDF
Trigger: GAAATCAATGGGGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGGAGGAAGACGAGTGAGGCTGCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 90 bp TTGAATAGGCAACCACATGTTTGTCACACGTGTGTCCTTCATGCATaGGTTCCTCATTGTCCTGTTCCTTCTGACCCACCCATGCTGAAG +
Preference number: 1 (lower is better)
Translates to: LNRQPHVCHTCVLHA*VPHCPVPSDPPMLK
Trigger: CTTCAGCATGGGTGGGTCAGAAGGAACAGGACAATGAGGAACTCATGCATGAAGGACACACGTGTGACAAACATGTGGTTGCCTATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CCA 90 bp CTCACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATaGGTAATTGTTGCTAGTGCAGTTCCTGTAGTAGCAGAAGTGTCC +
Preference number: 1 (lower is better)
Translates to: LTLFCNFLPRSWEAL*VIVASAVPVVAEVS
Trigger: GGACACTTCTGCTACTACAGGAACTGCACTAGCAACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CCA 90 bp AGTATATCCACTACTTCTGTATGGCTCAGGTTCTGTACATTCTGCTaGTTGATCTCAACAATGAGGTCGCCTTCACACAGGCCAGGGCAT +
Preference number: 1 (lower is better)
Translates to: SISTTSVWLRFCTFC*LISTMRSPSHRPGH
Trigger: ATGCCCTGGCCTGTGTGAAGGCGACCTCATTGTTGAGATCAACCAGCAGAATGTACAGAACCTGAGCCATACAGAAGTAGTGGATATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 90 bp ATTTGTGCCCACAGCCTGTGGCTTTCAGGCTATACAGTATGTCCGTaGCAGTCTTCTGATATACTTGTCCGGTATCTGTATCACTGGAAC +
Preference number: 1 (lower is better)
Translates to: ICAHSLWLSGYTVCP*QSSDILVRYLYHWN
Trigger: GTTCCAGTGATACAGATACCGGACAAGTATATCAGAAGACTGTCACGGACATACTGTATAGCCTGAAAGCCACAGGCTGTGGGCACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
3UTR GCA 90 bp TTAAGTATATCCACTACTTCTGTATGGCTCAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATGAGGTCGCCTTCACACAGGCCAGGG +
Preference number: 1 (lower is better)
Translates to: LSISTTSVWLRFCTF*WLISTMRSPSHRPG
Trigger: CCCTGGCCTGTGTGAAGGCGACCTCATTGTTGAGATCAACCAGCAGAATGTACAGAACCTGAGCCATACAGAAGTAGTGGATATACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 90 bp AGAACTTCAGCCCTCACCCTGTTCTGTAACTTTCTTCCCAGATCATaGGAGGCACTATGGGTAATTGTTGCTAGTGCAGTTCCTGTAGTA +
Preference number: 1 (lower is better)
Translates to: RTSALTLFCNFLPRS*EALWVIVASAVPVV
Trigger: TACTACAGGAACTGCACTAGCAACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGTGAGGGCTGAAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CCA 90 bp ACATGGCTGAGGCTCATTGACTTTCAGTGTCCTAAGTCCACAAATTaGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTAC +
Preference number: 1 (lower is better)
Translates to: TWLRLIDFQCPKSTN*QMGKPGLSLILFLY
Trigger: GTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGGACTTAGGACACTGAAAGTCAATGAGCCTCAGCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR TCA 90 bp TGGGTAATTGTTGCTAGTGCAGTTCCTGTAGTAGCAGAAGTGTCCTaGACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGC +
Preference number: 1 (lower is better)
Translates to: WVIVASAVPVVAEVS*TASFQTVKRFFYSS
Trigger: GCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGACACTTCTGCTACTACAGGAACTGCACTAGCAACAATTACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR TCA 90 bp TGCTTCTTTCTTTCAGCTTTGACAGCCTTCACTTGCATTTCAAACTaGGAGTTTCAGGCTGTTTTGAGTGCTTTGAATAGGCAACCACAT +
Preference number: 1 (lower is better)
Translates to: CFFLSALTAFTCISN*EFQAVLSALNRQPH
Trigger: ATGTGGTTGCCTATTCAAAGCACTCAAAACAGCCTGAAACTCTCAGTTTGAAATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR TCA 90 bp AGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCTaGACAGGTATTATCTGCACTAGTCTGATGTGTCTGTATGCCCGT +
Preference number: 1 (lower is better)
Translates to: RAHYSGQQLDLVFLI*TGIICTSLMCLYAR
Trigger: ACGGGCATACAGACACATCAGACTAGTGCAGATAATACCTGTTCAGATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 90 bp TTCAATGATTTGATCTCCTACCCTCATCCTCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCTCAACACATACAAATCCATTTTGTA +
Preference number: 1 (lower is better)
Translates to: FNDLISYPHPPIPYC*SIFCQSQHIQIHFV
Trigger: TACAAAATGGATTTGTATGTGTTGAGACTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGATGAGGGTAGGAGATCAAATCATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 90 bp TTGCTGTCCGTTTCCAAACAAGGAATCAACAATGTGATACTTCCTTaGAGGAAAAACACCTGCAGACAGGGCCAAATAAATCATAAAAGG +
Preference number: 1 (lower is better)
Translates to: LLSVSKQGINNVILP*RKNTCRQGQINHKR
Trigger: CCTTTTATGATTTATTTGGCCCTGTCTGCAGGTGTTTTTCCTTCAAGGAAGTATCACATTGTTGATTCCTTGTTTGGAAACGGACAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR TCA 90 bp TACTTTTTAGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTaGACTCCTGTAAAGAGTAAGAATATGGAAAGGATGAAGCCTCAT +
Preference number: 1 (lower is better)
Translates to: YFLDYKCREVELICI*TPVKSKNMERMKPH
Trigger: ATGAGGCTTCATCCTTTCCATATTCTTACTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCTAAAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR GCA 90 bp TTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTaGTGGGAAACAACAACTTTAAAGATGTTTGAAGACAAATCCATG +
Preference number: 1 (lower is better)
Translates to: FGYTRAMLSVVSIMG*WETTTLKMFEDKSM
Trigger: CATGGATTTGTCTTCAAACATCTTTAAAGTTGTTGTTTCCCAGCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 90 bp TTCACAGCTAACACTACACAAATATTATTTGGAATGGGATTTAGATaGTGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCA +
Preference number: 1 (lower is better)
Translates to: FTANTTQILFGMGFR*CAVFTGYGLQPHKA
Trigger: TGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATATTTGTGTAGTGTTAGCTGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR CCA 90 bp ATTATAGAAAGACAAAACGATTCAGAAAGCATATTAGTGGTTACCTaGGGTTTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATG +
Preference number: 1 (lower is better)
Translates to: IIERQNDSESILVVT*GLGEFGMMDVLRIM
Trigger: CATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAAACCCCAGGTAACCACTAATATGCTTTCTGAATCGTTTTGTCTTTCTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR GCA 90 bp GATCAATTAAAAGATATAATCTTGTCTCAGTTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCTT +
Preference number: 1 (lower is better)
Translates to: DQLKDIILSQFQLAP*SLIFKAIFQFVIAL
Trigger: AAGAGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTATATCTTTTAATTGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPAERSL*SPRRCF
Trigger: GAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGC...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CAA 90 bp CATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGCTaGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCC +
Preference number: 2 (lower is better)
Translates to: HLLAAEAPGLRTLGS*SEPGTFQGPGATAA
Trigger: GGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CAA 90 bp GGCCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTGTCAGAACCCGGCACCTTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GRGRAAHLLAAEAPG*RTLGSLSEPGTFQG
Trigger: GCCCTGGAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 2 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: AACQNPAPSRAPARRRPCEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: SLSEPGTFQGPGATAALREPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 2 (lower is better)
Translates to: AACQNPAPSRAPARRRPCGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 2 (lower is better)
Translates to: SLSEPGTFQGPGATAALRGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: AACQNPAPSRAPARRRPCGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 2 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: SLSEPGTFQGPGATAALRFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 2 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDALLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCT +
Preference number: 2 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSRAGWP*PRGSSA
Trigger: AGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCCGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: AACQNPAPSRAPARRRPCRRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: AACQNPAPSRAPARRRPCWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: SLSEPGTFQGPGATAALRWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 2 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSCSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMAERSL*SPRRCF
Trigger: GAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGC...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTTTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTG +
Preference number: 2 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAFDIPS*AWAYLV
Trigger: CACCAGATAAGCCCAGGCCCAACTTGGGATATCAAA...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 2 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTTTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCG +
Preference number: 2 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAFQLAP*SLIFKA
Trigger: CGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAA...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629359.2
3UTR-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 2 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYCSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 2 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 2 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 2 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDACALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 2 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSRRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGGCGCGGCTCATCTGCTaGCGGCCGAGGCGCCGGGTT +
Preference number: 2 (lower is better)
Translates to: TATQDTAITRRGNDQPREARLIC*RPRRRV
Trigger: AACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
3UTR-3UTR GCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGAGCACACCGGACACGTaGGACTTCACGTCGATGCTC +
Preference number: 2 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMSTPDT*DFTSML
Trigger: GAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCT...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: SLSEPGTFQGPGATAALRFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACCTGGGCTTATCTGGTaGGAAGGGTCGGAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIPGLIW*EGSEGG
Trigger: CCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGCGCGGCTCATCTGCTaGCGGCCGAGGCGCCGGGTT +
Preference number: 2 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHARLIC*RPRRRV
Trigger: AACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGCTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 2 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: TATQDTAITRRGNDQPREEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGTGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 2 (lower is better)
Translates to: TATQDTAITRRGNDQPRECSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629359.2
3UTR-3UTR CCA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCGCTGTTGGGGGTGGCTaGGCTTGGCTGGGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: PDLMSSIALACVMSLVLSAVGGG*AWLGQG
Trigger: CCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGC...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CAA 90 bp CCGCAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCG +
Preference number: 2 (lower is better)
Translates to: PQAESSFGFLTSCSR*ISQVGPGLIWWEGS
Trigger: CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 2 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHPRRRV*GRWAAC
Trigger: ACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 2 (lower is better)
Translates to: EITLLTKKLSISASLGRQLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 2 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAA +
Preference number: 2 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYAKGEP*KHVMGE
Trigger: TTCACCCATGACATGTTTCCATGGCTCACCCTTGGC...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCT +
Preference number: 2 (lower is better)
Translates to: ACDSENKLKRRETEPKKNRAGWP*PRGSSA
Trigger: AGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 2 (lower is better)
Translates to: RCSQALVPRGSMRVTVKILLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 2 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 2 (lower is better)
Translates to: TATQDTAITRRGNDQPREAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 2 (lower is better)
Translates to: KLLLRILQLQGEGMISPGCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGTCGCACACTCACAGATaGCCTGAAAGGTCCTACATT +
Preference number: 2 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGSHTHR*PERSYI
Trigger: AATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGA...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTCCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTCCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 2 (lower is better)
Translates to: YLSGARSPRTLTDALKGPPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR GCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 2 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: EITLLTKKLSISASLGRQGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 2 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 2 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTG +
Preference number: 2 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDFDIPS*AWAYLV
Trigger: CACCAGATAAGCCCAGGCCCAACTTGGGATATCAAA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CAA 90 bp CCCGTGCCTCTCTTGAGCAGCAGCCTCACTCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTT +
Preference number: 2 (lower is better)
Translates to: PVPLLSSSLTRLPPD*MSSIALACVMSLVL
Trigger: AAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGGAGGAAGACGAGTGAGGCTGCTGCTCAAGAGAGGCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: EITLLTKKLSISASLGRQFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATCTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 2 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 2 (lower is better)
Translates to: ACDSENKLKRRETEPKKNLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 2 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 2 (lower is better)
Translates to: KKLSISASLGRQKSLFIKAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 2 (lower is better)
Translates to: CKILHLRLSALFSSCQTTCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCCATCCAAGTCCTTCATaGAGTGGGGAGGAATATTTT +
Preference number: 2 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAHPSPS*SGEEYF
Trigger: AAAATATTCCTCCCCACTGCATGAAGGACTTGGATG...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGTCTCAGTTTCAGCTTaGTCCGTGCAGTTTGATTTT +
Preference number: 2 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYVSVSA*SVQFDF
Trigger: AAAATCAAACTGCACGGAGCAAGCTGAAACTGAGAC...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp GTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGTGCAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 2 (lower is better)
Translates to: VWFHILPCFHFRPVTIFVQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...CACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 2 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAGGCGCTGCTTCTTCTaGCCGCAGGCTGAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGRRCFF*PQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCT...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp GTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGTGCCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 2 (lower is better)
Translates to: VWFHILPCFHFRPVTIFVPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...CACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: YLSGARSPRTLTDALKGPDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAATTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: KLSISASLGRQKSLFIKEFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 2 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629359.2
3UTR-3UTR GCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp CAGGCTGTTTTGAGTGCTTTGAATAGGCAACCACATGTTTGTCACACGTGTGTCGGAGAAGGGGCCCTGTaGTTTACCCCATTCCCTTCC +
Preference number: 2 (lower is better)
Translates to: QAVLSALNRQPHVCHTCVGEGAL*FTPFPS
Trigger: GGAAGGGAATGGGGTAAAGCACAGGGCCCCTTCTCC...GACACACGTGTGACAAACATGTGGTTGCCTATTCAAAGCACTCAAAACAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 2 (lower is better)
Translates to: KLSISASLGRQKSLFIKEDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 2 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 2 (lower is better)
Translates to: KKLSISASLGRQKSLFIKDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGAGCACACCGGACACGTaGGACTTCACGTCGATGCTC +
Preference number: 2 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKSTPDT*DFTSML
Trigger: GAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCT...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCCCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 2 (lower is better)
Translates to: PDLMSSIALACVMSLVLSPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CAA 90 bp ATATCCACTACTTCTGTATGGCTCAGGTTCTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCGCCTTCACACAGGCCAGGGCATCCC +
Preference number: 2 (lower is better)
Translates to: ISTTSVWLRFCTFCW*ISTMRSPSHRPGHP
Trigger: GGGATGCCCTGGCCTGTGTGAAGGCGACCTCATTGTTGAGATCAACCAGCAGAATGTACAGAACCTGAGCCATACAGAAGTAGTGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 2 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPLLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: ASWIYACDSENKLKRRETRRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 2 (lower is better)
Translates to: IILSQFQLAPCSLIFKAILRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCG +
Preference number: 2 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPFQLAP*SLIFKA
Trigger: CGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAA...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp CATGTGCCTGTAGTCCTACCTACTGGAGAAGCTGAGGTGAAGGATCACTTGAGCCACGTGTGTCCTTCATaGATGAGTTCCTCATTGTCC +
Preference number: 2 (lower is better)
Translates to: HVPVVLPTGEAEVKDHLSHVCPS*MSSSLS
Trigger: GGACAATGAGGAACTCATGCATGAAGGACACACGTG...GCTCAAGTGATCCTTCACCTCAGCTTCTCCAGTAGGTAGGACTACAGGCACATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 2 (lower is better)
Translates to: ASWIYACDSENKLKRRETGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAATCCCAAGTTGGGCCTaGGCTTATCTGGTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGIPSWA*AYLVGR
Trigger: CCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGAT...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: ASWIYACDSENKLKRRETWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGTCTCAGTTTCAGCTTaGTCCGTGCAGTTTGATTTT +
Preference number: 2 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLVSVSA*SVQFDF
Trigger: AAAATCAAACTGCACGGAGCAAGCTGAAACTGAGAC...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 2 (lower is better)
Translates to: SSHTHRCPERSYISYFKHKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATAGCACACCGGACACGTaGGACTTCACGTCGATGCTC +
Preference number: 2 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHSTPDT*DFTSML
Trigger: GAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCT...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGCCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: KKLSISASLGRQKSLFIKPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGTTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTG +
Preference number: 2 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPFDIPS*AWAYLV
Trigger: CACCAGATAAGCCCAGGCCCAACTTGGGATATCAAA...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCCGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHTEGTA*CRGSAA
Trigger: GGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGT...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CAA 90 bp CCTGTAGTCTGTGAATGGAGGCTGTCGGATGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: PVVCEWRLSDVWFHI*PCFHFRPVTIFVSL
Trigger: CAAGGACACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATCCGACAGCCTCCATTCACAGACTACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGATTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACGATATTCCAGTTTGTaGTTGCTCTTAACTTTGTCC +
Preference number: 2 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIRYSSL*LLLTLS
Trigger: GGACAAAGTTAAGAGCAATCACAAACTGGAATATCG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 2 (lower is better)
Translates to: ASWIYACDSENKLKRRETDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 2 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTATTACGTGTGACCTTTaGGATGGACCTGATCGCCCC +
Preference number: 2 (lower is better)
Translates to: CKILHLRLSALFSSCQTTITCDL*DGPDRP
Trigger: GGGGCGATCAGGTCCATCTCAAAGGTCACACGTAAT...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp CTGTCGGCTGAGCCCATGGCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCTCCTTTGAGATAGTCTaGTGCATAAACAATGTTAGG +
Preference number: 2 (lower is better)
Translates to: LSAEPMAMTAPIKIGCPGSFEIV*CINNVR
Trigger: CCTAACATTGTTTATGCATCAGACTATCTCAAAGGA...GCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGCCATGGGCTCAGCCGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR GCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCCATCCAAGTCCTTCATaGAGTGGGGAGGAATATTTT +
Preference number: 2 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVHPSPS*SGEEYF
Trigger: AAAATATTCCTCCCCACTGCATGAAGGACTTGGATG...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACCCTGAAGATATGTTaGTTGTCTCTGGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: YLSGARSPRTLTDALKGPTLKIC*LSLAPV
Trigger: AACTGGGGCCAGAGACAAGCAACATATCTTCAGGGT...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
3UTR-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 2 (lower is better)
Translates to: ACDSENKLKRRETEPKKNGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 2 (lower is better)
Translates to: LEIAFTSCKILHLRLSALDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCCATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 2 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATAAGGCGCTGCTTCTTCTaGCCGCAGGCTGAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIRRCFF*PQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCT...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629359.2
3UTR-3UTR CCA 90 bp AGCTGTTTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTGCCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 2 (lower is better)
Translates to: SCFGYTRAMLSVVSIMGCPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...GCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: KPLHKGTAALPILIKQIVFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGATTACGTGTGACCTTTaGGATGGACCTGATCGCCCC +
Preference number: 2 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLITCDL*DGPDRP
Trigger: GGGGCGATCAGGTCCATCTCAAAGGTCACACGTAAT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 2 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRLLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
3UTR-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCCATCCAAGTCCTTCATaGAGTGGGGAGGAATATTTT +
Preference number: 2 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERHPSPS*SGEEYF
Trigger: AAAATATTCCTCCCCACTGCATGAAGGACTTGGATG...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp GTGGGTTTTGCCGGCTACTGGAATCCCATCAACATACACAAGCTCATCTCCTGGAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 2 (lower is better)
Translates to: VGFAGYWNPINIHKLISWRFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...CCAGGAGATGAGCTTGTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATAAGCACACCGGACACGTaGGACTTCACGTCGATGCTC +
Preference number: 2 (lower is better)
Translates to: IILSQFQLAPCSLIFKAISTPDT*DFTSML
Trigger: GAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCT...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCAGCACACCGGACACGTaGGACTTCACGTCGATGCTC +
Preference number: 2 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSSTPDT*DFTSML
Trigger: GAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCT...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGCATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 2 (lower is better)
Translates to: KLLLRILQLQGEGMISPGHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAA +
Preference number: 2 (lower is better)
Translates to: CKILHLRLSALFSSCQTTAKGEP*KHVMGE
Trigger: TTCACCCATGACATGTTTCCATGGCTCACCCTTGGC...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp GTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGTGTTCGAAAACTGGTCCTaGGTGGCACTTGTTGCCTAC +
Preference number: 2 (lower is better)
Translates to: VWFHILPCFHFRPVTIFVFENWS*VALVAY
Trigger: GTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAA...CACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTT +
Preference number: 2 (lower is better)
Translates to: YLSGARSPRTLTDALKGPNPFEN*SWVALV
Trigger: AACAAGTGCCACCCAGGACCAGTTTTCGAATGGATT...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATCACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 2 (lower is better)
Translates to: SSHTHRCPERSYISYFKHHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCCAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 2 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 2 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp AGCTGTTTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTGCTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 2 (lower is better)
Translates to: SCFGYTRAMLSVVSIMGCFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...GCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR GCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR GCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTACAGTACCAGGACGTaGAGCTACACTACAGAAGCA +
Preference number: 2 (lower is better)
Translates to: CKILHLRLSALFSSCQTTYSTRT*SYTTEA
Trigger: TGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCTTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 2 (lower is better)
Translates to: PDLMSSIALACVMSLVLSFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR GCA 90 bp AGCTGTTTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTGCGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 2 (lower is better)
Translates to: SCFGYTRAMLSVVSIMGCGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...GCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAAGCACACCGGACACGTaGGACTTCACGTCGATGCTC +
Preference number: 2 (lower is better)
Translates to: CSYTTEALSKTRFNKLMASTPDT*DFTSML
Trigger: GAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCT...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTACCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: LEIAFTSCKILHLRLSALPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR CAA 90 bp GGGAACCTAAGACTTTGTAGAGTGCTGCTCACAAATGCCTGGTGTTaGCTGTCCGTTTCCAAACAAGGAATCAACAATGTGATACTTCCT +
Preference number: 2 (lower is better)
Translates to: GNLRLCRVLLTNAWC*LSVSKQGINNVILP
Trigger: AGGAAGTATCACATTGTTGATTCCTTGTTTGGAAACGGACAGCAAACACCAGGCATTTGTGAGCAGCACTCTACAAAGTCTTAGGTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR TCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATGAAACATGTCATGGGTaGACGGTTCCGAATGTGTCA +
Preference number: 2 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHETCHG*TVPNVS
Trigger: TGACACATTCGGAACCGTTCACCCATGACATGTTTC...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCGAAACATGTCATGGGTaGACGGTTCCGAATGTGTCA +
Preference number: 2 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLETCHG*TVPNVS
Trigger: TGACACATTCGGAACCGTTCACCCATGACATGTTTC...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGCCTTTGAGATGGACCTaGTCGCCCCTTTTACTTTTT +
Preference number: 2 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEPLRWT*SPLLLF
Trigger: AAAAAGTAAAAGGGGCGATCAGGTCCATCTCAAAGG...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTTTAAACTTCACACCCTaGAGATATGTTGCTTGTCTC +
Preference number: 2 (lower is better)
Translates to: YLSGARSPRTLTDALKGPLNFTP*RYVACL
Trigger: GAGACAAGCAACATATCTTCAGGGTGTGAAGTTTAA...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
3UTR-3UTR TCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTAATGGGAAACCAGTTTaGGTTCTCCATGACCGATAC +
Preference number: 2 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVNGKPV*VLHDRY
Trigger: GTATCGGTCATGGAGAACTCAAACTGGTTTCCCATT...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR GCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCG +
Preference number: 2 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKFQLAP*SLIFKA
Trigger: CGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAACCTATTTCCATACTTTaGCCGGGACACTCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQPISIL*PGHSGQ
Trigger: CTGGCCTGAGTGTCCCGGGCAAAGTATGGAAATAGG...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAA +
Preference number: 2 (lower is better)
Translates to: LEIAFTSCKILHLRLSALAKGEP*KHVMGE
Trigger: TTCACCCATGACATGTTTCCATGGCTCACCCTTGGC...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR CAA 90 bp GGCTTTCAGGCTATACAGTATGTCCGTGACAGTCTTCTGATATACTaGTCCGGTATCTGTATCACTGGAACAAATCAAAACAAGACCCCT +
Preference number: 2 (lower is better)
Translates to: GFQAIQYVRDSLLIY*SGICITGTNQNKTP
Trigger: AGGGGTCTTGTTTTGATTTGTTCCAGTGATACAGATACCGGACAAGTATATCAGAAGACTGTCACGGACATACTGTATAGCCTGAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524268.1
3UTR-3UTR TCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAACGATATTCCAGTTTGTaGTTGCTCTTAACTTTGTCC +
Preference number: 2 (lower is better)
Translates to: KLSISASLGRQKSLFIKERYSSL*LLLTLS
Trigger: GGACAAAGTTAAGAGCAATCACAAACTGGAATATCG...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAACGATATTCCAGTTTGTaGTTGCTCTTAACTTTGTCC +
Preference number: 2 (lower is better)
Translates to: ITLLTKKLSISASLGRQKRYSSL*LLLTLS
Trigger: GGACAAAGTTAAGAGCAATCACAAACTGGAATATCG...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 2 (lower is better)
Translates to: CKILHLRLSALFSSCQTTLLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATAGAATATGGAAAGGATaGAGCCTCATTCATTCGGGC +
Preference number: 2 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHRIWKG*SLIHSG
Trigger: GCCCGAATGAATGAGGCTTCATCCTTTCCATATTCT...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGTACTGTGTACTCAAATaGACAGTGGACTATCAGTCA +
Preference number: 2 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLYCVLK*TVDYQS
Trigger: TGACTGATAGTCCACTGTTCATTTGAGTACACAGTA...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
3UTR-3UTR TCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAACTGACCCACCCATGCTaGAGCTTCGATGTTTACACT +
Preference number: 2 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQLTHPC*SFDVYT
Trigger: AGTGTAAACATCGAAGCTTCAGCATGGGTGGGTCAG...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR GCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAAGTGCTGCTCACAAATaGCTGGTGTTTGCTGTCCGT +
Preference number: 2 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQSAAHK*LVFAVR
Trigger: ACGGACAGCAAACACCAGGCATTTGTGAGCAGCACT...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR GCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 2 (lower is better)
Translates to: SSHTHRCPERSYISYFKHNSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCCATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 2 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATCATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 2 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGACAAGTGCAGGGAGGTaGAGCTTATTTGCATTTGAA +
Preference number: 2 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKETSAGR*SLFAFE
Trigger: TTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCTCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLISLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAAACGTACCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 2 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHKRTIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGGTACGTTT...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACTTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 2 (lower is better)
Translates to: ACDSENKLKRRETEPKKNLLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR TCA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATCTGGGAGAAAGGACTaGAAGTCTGGGATAGGACAG +
Preference number: 2 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQSGRKD*KSGIGQ
Trigger: CTGTCCTATCCCAGACTTTCAGTCCTTTCTCCCAGA...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR GCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAATGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 2 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGATAAGACAAATACTCTaGCTCTGCTCTGTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEIRQIL*LCSVKV
Trigger: CACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTTTTTAGACTACAAGTaGAGGGAGGTGGAGCTTATT +
Preference number: 2 (lower is better)
Translates to: CKILHLRLSALFSSCQTTFLDYK*REVELI
Trigger: AATAAGCTCCACCTCCCTGCACTTGTAGTCTAAAAA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTACATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 2 (lower is better)
Translates to: LEIAFTSCKILHLRLSALHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGCCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTTTTCTTCCCAGATCATaGGAGGCACTATGGGTAATT +
Preference number: 2 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLFLPRS*EALWVI
Trigger: AATTACCCATAGTGCCTCCCATGATCTGGGAAGAAA...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAACCACAAATTGGCAAATaGGAAAACCAGGGCTTAGCC +
Preference number: 2 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQPQIGK*ENQGLA
Trigger: GGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGG...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CAA 90 bp GTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATaGTCCAAAACCAGATTCAATAAATTAATGGCAAACTATACTGGA +
Preference number: 2 (lower is better)
Translates to: VRGYSTRTCSYTTEA*SKTRFNKLMANYTG
Trigger: TCCAGTATAGTTTGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTACGATATTCCAGTTTGTaGTTGCTCTTAACTTTGTCC +
Preference number: 2 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVRYSSL*LLLTLS
Trigger: GGACAAAGTTAAGAGCAATCACAAACTGGAATATCG...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGAAACATGTCATGGGTaGACGGTTCCGAATGTGTCA +
Preference number: 2 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAETCHG*TVPNVS
Trigger: TGACACATTCGGAACCGTTCACCCATGACATGTTTC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 2 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 2 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCGCAAGATCCTTCACTTaGGGCTTTCAGCCTTATTCT +
Preference number: 2 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSARSFT*GFQPYS
Trigger: AGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGC...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAGTAGCAGAAGTGTCCTaGACAGCATCATTCCAAACT +
Preference number: 2 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQVAEVS*TASFQT
Trigger: AGTTTGGAATGATGCTGTTCAGGACACTTCTGCTAC...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR GCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGATTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCG +
Preference number: 2 (lower is better)
Translates to: PLLCQSANEVMETGFKIRFQLAP*SLIFKA
Trigger: CGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAA...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAGTCTCAGTTTCAGCTTaGTCCGTGCAGTTTGATTTT +
Preference number: 2 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRVSVSA*SVQFDF
Trigger: AAAATCAAACTGCACGGAGCAAGCTGAAACTGAGAC...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATATAAGACAAATACTCTaGCTCTGCTCTGTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHIRQIL*LCSVKV
Trigger: CACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGATTGCTTTTACAAGCTaGAAGATCCTTCACTTGAGG +
Preference number: 2 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLIAFTS*KILHLR
Trigger: CCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAAT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGAGTAGCTGTGAACTGTaGAAACTAGAGTTTATGCCA +
Preference number: 2 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLSSCEL*KLEFMP
Trigger: TGGCATAAACTCTAGTTTGCACAGTTCACAGCTACT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAGACTTTGTAGAGTGCTaGTCACAAATGCCTGGTGTT +
Preference number: 2 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQDFVEC*SQMPGV
Trigger: AACACCAGGCATTTGTGAGCAGCACTCTACAAAGTC...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAA +
Preference number: 2 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQAKGEP*KHVMGE
Trigger: TTCACCCATGACATGTTTCCATGGCTCACCCTTGGC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATATGTTGATGATAGACTaGCCATTCACTGCTAGGATC +
Preference number: 2 (lower is better)
Translates to: SSHTHRCPERSYISYFKHMLMID*PFTARI
Trigger: GATCCTAGCAGTGAATGGCCAGTCTATCATCAACAT...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAATTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 2 (lower is better)
Translates to: LLCQSANEVMETGFKIRQLLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGCCTTCAGAAACACTTTaGCTTTTAATATGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEPSETL*LLICVA
Trigger: AGCTACACATATTAAAAGGCAAAGTGTTTCTGAAGG...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 2 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp AATCATAAAAGGTGCTTCTTTCTTTCAGCTTTGACAGCCTTCACTTGCATTTCATCATGGGAGGCACTATaGGTAATTGTTGCTAGTGCA +
Preference number: 2 (lower is better)
Translates to: NHKRCFFLSALTAFTCISSWEAL*VIVASA
Trigger: TGCACTAGCAACAATTACCCATAGTGCCTCCCATGA...TGAAATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAAGCACCTTTTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CCA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAACCTAAGTCCACAAATTaGCAAATGGGAAAACCAGGG +
Preference number: 2 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQPKSTN*QMGKPG
Trigger: CCCTGGTTTTCCCATTTGCCAATTTGTGGACTTAGG...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 2 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR TCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACCCTTTGAGATGGACCTaGTCGCCCCTTTTACTTTTT +
Preference number: 2 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYPLRWT*SPLLLF
Trigger: AAAAAGTAAAAGGGGCGATCAGGTCCATCTCAAAGG...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCCCTTTGAGATGGACCTaGTCGCCCCTTTTACTTTTT +
Preference number: 2 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLPLRWT*SPLLLF
Trigger: AAAAAGTAAAAGGGGCGATCAGGTCCATCTCAAAGG...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCCACTCACAGATGCCCTaGAAGGTCCTACATTTCATA +
Preference number: 2 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLIHSQMP*KVLHFI
Trigger: TATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTG...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR GCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGATCTATGAGCTAAACTaGAAAATTCTGACTTATGGC +
Preference number: 2 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLIYELN*KILTYG
Trigger: GCCATAAGTCAGAATTTTGCAGTTTAGCTCATAGAT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAATCTATGAGCTAAACTaGAAAATTCTGACTTATGGC +
Preference number: 2 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVIYELN*KILTYG
Trigger: GCCATAAGTCAGAATTTTGCAGTTTAGCTCATAGAT...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCACAAATACTCTGCCTCTaGTCTGTCAAAGTGCAAATG +
Preference number: 2 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAQILCL*SVKVQM
Trigger: CATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTG...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTACCTTCAGAAACACTTTaGCTTTTAATATGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVPSETL*LLICVA
Trigger: AGCTACACATATTAAAAGGCAAAGTGTTTCTGAAGG...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCAGTAGCTGTGAACTGTaGAAACTAGAGTTTATGCCA +
Preference number: 2 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSSSCEL*KLEFMP
Trigger: TGGCATAAACTCTAGTTTGCACAGTTCACAGCTACT...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR CAA 90 bp CAGCTGTACAGGGTAAATTCACAGCTAACACTACACAAATATTATTaGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGAT +
Preference number: 2 (lower is better)
Translates to: QLYRVNSQLTLHKYY*EWDLDDVLSSQVMD
Trigger: ATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATATTTGTGTAGTGTTAGCTGTGAATTTACCCTGTACAGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 2 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLLLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCGAGCTTATTTGCATTTaGACTCCTGTAAAGAGTAAG +
Preference number: 2 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSELICI*TPVKSK
Trigger: CTTACTCTTTACAGGAGTTCAAATGCAAATAAGCTC...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGGTCTCAGTTTCAGCTTaGTCCGTGCAGTTTGATTTT +
Preference number: 2 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKVSVSA*SVQFDF
Trigger: AAAATCAAACTGCACGGAGCAAGCTGAAACTGAGAC...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAATCTATGAGCTAAACTaGAAAATTCTGACTTATGGC +
Preference number: 2 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRIYELN*KILTYG
Trigger: GCCATAAGTCAGAATTTTGCAGTTTAGCTCATAGAT...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACACAAGTGCAGGGAGGTaGAGCTTATTTGCATTTGAA +
Preference number: 2 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYTSAGR*SLFAFE
Trigger: TTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGT...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCACAAGTGCAGGGAGGTaGAGCTTATTTGCATTTGAA +
Preference number: 2 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLTSAGR*SLFAFE
Trigger: TTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGT...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCCGATATTCCAGTTTGTaGTTGCTCTTAACTTTGTCC +
Preference number: 2 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLRYSSL*LLLTLS
Trigger: GGACAAAGTTAAGAGCAATCACAAACTGGAATATCG...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATACTTGCATTTCAAACTaGGAGTTTCAGGCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNTCISN*EFQAVL
Trigger: CAAAACAGCCTGAAACTCTCAGTTTGAAATGCAAGT...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR GCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAATCTATGAGCTAAACTaGAAAATTCTGACTTATGGC +
Preference number: 2 (lower is better)
Translates to: LLCQSANEVMETGFKIRQIYELN*KILTYG
Trigger: GCCATAAGTCAGAATTTTGCAGTTTAGCTCATAGAT...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTTTTTAGACTACAAGTaGAGGGAGGTGGAGCTTATT +
Preference number: 2 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLFLDYK*REVELI
Trigger: AATAAGCTCCACCTCCCTGCACTTGTAGTCTAAAAA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR TCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATTGTTTGGCTATCATATaGATTTCCCTTTTAGTACCG +
Preference number: 2 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNCLAII*ISLLVP
Trigger: CGGTACTAAAAGGGAAATTCATATGATAGCCAAACA...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR GCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAACCTTCAGAAACACTTTaGCTTTTAATATGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQPSETL*LLICVA
Trigger: AGCTACACATATTAAAAGGCAAAGTGTTTCTGAAGG...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR GCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACCCTTCAGAAACACTTTaGCTTTTAATATGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYPSETL*LLICVA
Trigger: AGCTACACATATTAAAAGGCAAAGTGTTTCTGAAGG...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR CCA 72 bp GAAGAACTGCCTGCGCCGGGGCGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCC +
Preference number: 3 (lower is better)
Translates to: EELPAPGRAGWP*PRGSSAGGRGA
Trigger: GGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCGCCCCGGCGCAGGCAGTTCTTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR GCA 72 bp CGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCT +
Preference number: 3 (lower is better)
Translates to: RAALCGLAERSL*SPRRCFFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR TCA 72 bp GCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGTCAGAACCCGGCACCT +
Preference number: 3 (lower is better)
Translates to: ARLICWRPRRRV*GRWAACQNPAP
Trigger: AGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR GCA 72 bp GGACTCGCCGAGCGCTCCCTCTGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGT +
Preference number: 3 (lower is better)
Translates to: GLAERSLCSPRR*FFWPQAESSFG
Trigger: ACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGCGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CCA 72 bp GCGTTGATGCGATGCCGCCCAAGCACACCGGACACGTaGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCC +
Preference number: 3 (lower is better)
Translates to: ALMRCRPSTPDT*DFTSMLPGLGA
Trigger: GGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCTTGGGCGGCATCGCATCAACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CAA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYAEAPG*RTLGSL
Trigger: CAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGC...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR GCA 72 bp AAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGGGTTGGCCGTGGCCGC +
Preference number: 3 (lower is better)
Translates to: KLKRRETEPKKN*LRRGGRVGRGR
Trigger: GCGGCCACGGCCAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR CCA 72 bp TTCGTGTCCTTGCAGCTGAAGTGGTTGAGGTGGTGCTaGCTGGGCGATGGGGCTGTTGGGGGTGGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: FVSLQLKWLRWC*LGDGAVGGGWA
Trigger: AGCCCAGCCACCCCCAACAGCCCCATCGCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGACACGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR GCA 72 bp GCCCAAGCACACCGGACACGTGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGT +
Preference number: 3 (lower is better)
Translates to: AQAHRTRGTSRR*SQALVPRGSMR
Trigger: ACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR CCA 72 bp CCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCCTGTAGTCCAGTAGGG +
Preference number: 3 (lower is better)
Translates to: PGVVCSPTEGTA*CRGSAACSPVG
Trigger: CCCTACTGGACTACAGGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 72 bp CTGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCG +
Preference number: 3 (lower is better)
Translates to: LLPEALLLLAAG*KLLWFPNVVFP
Trigger: CGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CAA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 3 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYRCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CAA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATAGGACGCTGGGCAGCTaGTCAGAACCCGGCACCTTC +
Preference number: 3 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDRTLGS*SEPGTF
Trigger: GAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCT...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CCA 72 bp AACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTaGGCTTATCTGGTGGGAAGGGTCGGAGGGTGGGGC +
Preference number: 3 (lower is better)
Translates to: NVVFPFDIPSWA*AYLVGRVGGWG
Trigger: GCCCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CCA 72 bp AGGTTGCGTAGTCACTGCGTGGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: RLRSHCVESCGG*IQSLDFSRSLG
Trigger: GCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTCCACGCAGTGACTACGCAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR GCA 72 bp CAGCGTGGTTGCTGTTGGTGTAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGGTGGATACAGAGCCTG +
Preference number: 3 (lower is better)
Translates to: QRGCCWCRLRSH*VESCGGWIQSL
Trigger: CAGGCTCTGTATCCACCCACCACAGCTCTCCACGCAGTGACTACGCAACCTACACCAACAGCAACCACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 72 bp GGAATCCCATCAACATACACAAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCGGCTGAGCCCATGGCA +
Preference number: 3 (lower is better)
Translates to: GIPSTYTSSSPG*RRPSLSAEPMA
Trigger: TGCCATGGGCTCAGCCGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTGTATGTTGATGGGATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR GCA 72 bp CCACATAGCACCTTTCTTCTCACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGGTGCATGAGGTCGATG +
Preference number: 3 (lower is better)
Translates to: PHSTFLLTVRLT*PLRAAWCMRSM
Trigger: CATCGACCTCATGCACCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGTGAGAAGAAAGGTGCTATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 72 bp GTGGTTGCTGTTGGTGTAGGTTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGATACAGAGCCTGGACT +
Preference number: 3 (lower is better)
Translates to: VVAVGVGCVVTA*RAVVGGYRAWT
Trigger: AGTCCAGGCTCTGTATCCACCCACCACAGCTCTCCACGCAGTGACTACGCAACCTACACCAACAGCAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 72 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTGGGAAGGGTCGGAGGG +
Preference number: 3 (lower is better)
Translates to: FPNVVFPFDIPS*AWAYLVGRVGG
Trigger: CCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CCA 72 bp CCTGTAATCCAGCGGGGGCTGCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGGTTTCACATCTTGCCT +
Preference number: 3 (lower is better)
Translates to: PVIQRGLPVVCE*RLSDVWFHILP
Trigger: AGGCAAGATGTGAAACCAGACATCCGACAGCCTCCATTCACAGACTACAGGCAGCCCCCGCTGGATTACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 3 (lower is better)
Translates to: TATQDTAITRRGNDQPRERCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CAA 90 bp AGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: SSNQNRLSRLISPEDSEAGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...GGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 72 bp GTTGCCTGTAATCCAGCGGGGGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGTCTGGTTTCACATCTT +
Preference number: 3 (lower is better)
Translates to: VACNPAGAACSL*MEAVGCLVSHL
Trigger: AAGATGTGAAACCAGACATCCGACAGCCTCCATTCACAGACTACAGGCAGCCCCCGCTGGATTACAGGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR GCA 72 bp CCGACCACCCATGGTCCTGATATAAGGACCCAGGCCTaGGACTCAGCTCTTGAGTCTGCTTATCTCAAAGAG +
Preference number: 3 (lower is better)
Translates to: PTTHGPDIRTQA*DSALESAYLKE
Trigger: CTCTTTGAGATAAGCAGACTCAAGAGCTGAGTCGCAGGCCTGGGTCCTTATATCAGGACCATGGGTGGTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCT +
Preference number: 3 (lower is better)
Translates to: RCSQALVPRGSMRVTVKITSCSR*ISQVGP
Trigger: AGGCCCAACTTGGGATATCAAACGGGAACACGACGT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR GCA 72 bp CTCCTGAGGAATGATGCGAAGGGTGACACTAAGACCTaGATCCTTGATGAGCTTCACGATGTCAGCGTGAGG +
Preference number: 3 (lower is better)
Translates to: LLRNDAKGDTKT*ILDELHDVSVR
Trigger: CCTCACGCTGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACCCTTCGCATCATTCCTCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 72 bp CTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAACGGTTCCGAATGTGT +
Preference number: 3 (lower is better)
Translates to: LLTPRMDAKGEP*KHVMGERFRMC
Trigger: ACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR CCA 72 bp GAGGTCGATGACATAGCGGTGGGTTTTGCCGGCTACTaGAATCCCATCAACATACACAAGCTCATCTCCTGG +
Preference number: 3 (lower is better)
Translates to: EVDDIAVGFAGY*NPINIHKLISW
Trigger: CCAGGAGATGAGCTTGTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATGTCATCGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAACGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 3 (lower is better)
Translates to: KLSISASLGRQKSLFIKERCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CAA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAACGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 3 (lower is better)
Translates to: ITLLTKKLSISASLGRQKRCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CAA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: KPLHKGTAALPILIKQIVAEAPG*RTLGSL
Trigger: CAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGC...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
3UTR CCA 72 bp CTGCCTGTAGTCTGTGAATGGAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGCTTTCACTTCCGACCT +
Preference number: 3 (lower is better)
Translates to: LPVVCEWRLSDV*FHILPCFHFRP
Trigger: AGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATCCGACAGCCTCCATTCACAGACTACAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 3 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQRCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
3UTR-3UTR CAA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTCTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 3 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPLAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCTGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLIWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 72 bp AGTATTGTCAAGACTGTGCTTGGGCTTAGTAGGGGTTaGACTGGCTTCCACCTGCTAGCCTGGAAACCTAAG +
Preference number: 3 (lower is better)
Translates to: SIVKTVLGLSRG*TGFHLLAWKPK
Trigger: CTTAGGTTTCCAGGCTAGCAGGTGGAAGCCAGTTCAACCCCTACTAAGCCCAAGCACAGTCTTGACAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR TCA 72 bp CAACCACATGTTTGTCACACGTGTGTCCTTCATGCATaGGTTCCTCATTGTCCTGTTCCTTCTGACCCACCC +
Preference number: 3 (lower is better)
Translates to: QPHVCHTCVLHA*VPHCPVPSDPP
Trigger: GGGTGGGTCAGAAGGAACAGGACAATGAGGAACTCATGCATGAAGGACACACGTGTGACAAACATGTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR TCA 72 bp AGACCTGCATCCTTGATGAGCTTCACGATGTCAGCGTaGGGCATGTTGATGATAGACTGGCCATTCACTGCT +
Preference number: 3 (lower is better)
Translates to: RPASLMSFTMSA*GMLMIDWPFTA
Trigger: AGCAGTGAATGGCCAGTCTATCATCAACATGCCTCACGCTGACATCGTGAAGCTCATCAAGGATGCAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR GCA 72 bp CCTCACTCGTCTTCCTCCAGATTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTCCCTTGTGCTTTCCCC +
Preference number: 3 (lower is better)
Translates to: PHSSSSRFDEFY*SGMCHVPCAFP
Trigger: GGGGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGGAGGAAGACGAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 72 bp GGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATaGGTGAACGGTTCCGAATGTGTCAAAGAAACCCTT +
Preference number: 3 (lower is better)
Translates to: GWMPRVSHGNMS*VNGSECVKETL
Trigger: AAGGGTTTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGCTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 3 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLLAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCCACCCTGAAGATATGTaGCTTGTCTCTGGCCCCAGT +
Preference number: 3 (lower is better)
Translates to: PDLMSSIALACVMSLVLSHPEDM*LVSGPS
Trigger: ACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTG...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCT +
Preference number: 3 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKTSCSR*ISQVGP
Trigger: AGGCCCAACTTGGGATATCAAACGGGAACACGACGT...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR-3UTR CAA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 3 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLIVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 72 bp CCTTCATGCATGAGTTCCTCATTGTCCTGTTCCTTCTaGCCCACCCATGCTGAAGCTTCGATGTTTACACTC +
Preference number: 3 (lower is better)
Translates to: PSCMSSSLSCSF*PTHAEASMFTL
Trigger: GAGTGTAAACATCGAAGCTTCAGCATGGGTGGGTCAGAAGGAACAGGACAATGAGGAACTCATGCATGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR GCA 72 bp TGGAGGCTGTCGGATGTCTGGTTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTAACTATTTTCGTGTCC +
Preference number: 3 (lower is better)
Translates to: WRLSDVWFHILP*FHFRPVTIFVS
Trigger: GGACACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATCCGACAGCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 72 bp CTGCACTGTCTCTCTGTGATGTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGA +
Preference number: 3 (lower is better)
Translates to: LHCLSVMFFTLF*FFHSCQSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGAGAGACAGTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR CCA 72 bp GCCCTCACCCTGTTCTGTAACTTTCTTCCCAGATCATaGGAGGCACTATGGGTAATTGTTGCTAGTGCAGTT +
Preference number: 3 (lower is better)
Translates to: ALTLFCNFLPRS*EALWVIVASAV
Trigger: AACTGCACTAGCAACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGTGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CCA 72 bp GAAGAAACATTCAGGGCTCAGAGCTTCTACCACACTTaGCACTGTTCCTATTTCCATACTTTGCCCGGGACA +
Preference number: 3 (lower is better)
Translates to: EETFRAQSFYHT*HCSYFHTLPGT
Trigger: TGTCCCGGGCAAAGTATGGAAATAGGAACAGTGCCAAGTGTGGTAGAAGCTCTGAGCCCTGAATGTTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CAA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 3 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCCCTGGGTGGCACTTGTaGCCTACTTTCATAAATGGC +
Preference number: 3 (lower is better)
Translates to: PDLMSSIALACVMSLVLSPGWHL*PTFING
Trigger: GCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGG...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGCTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 3 (lower is better)
Translates to: TATQDTAITRRGNDQPRELAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp AGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCAAAGAAATGCAACCATaGCGTGAACTGAAGTTTACA +
Preference number: 3 (lower is better)
Translates to: SSNQNRLSRLISPEDSEAKEMQP*RELKFT
Trigger: TGTAAACTTCAGTTCACGCAATGGTTGCATTTCTTT...GGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCT +
Preference number: 3 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLTSCSR*ISQVGP
Trigger: AGGCCCAACTTGGGATATCAAACGGGAACACGACGT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
3UTR-3UTR CAA 90 bp GGTCCTGGGTGGCACTTGTTGCCTACTTTCATAAATGGCCCTAGATTTCTCGTATGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 3 (lower is better)
Translates to: GPGWHLLPTFINGPRFLVCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...TACGAGAAATCTAGGGCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp GTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGTGCTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 3 (lower is better)
Translates to: VWFHILPCFHFRPVTIFVLPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...CACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCCTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 3 (lower is better)
Translates to: PDLMSSIALACVMSLVLSLRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR GCA 72 bp TCCACTACTTCTGTATGGCTCAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATGAGGTCGCCTTCACAC +
Preference number: 3 (lower is better)
Translates to: STTSVWLRFCTF*WLISTMRSPSH
Trigger: GTGTGAAGGCGACCTCATTGTTGAGATCAACCAGCAGAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 72 bp GACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGTGAAAATAAATTAAAA +
Preference number: 3 (lower is better)
Translates to: DFTSMLPGLGAS*IYACDSENKLK
Trigger: TTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
3UTR TCA 72 bp CACAGCCTGTGGCTTTCAGGCTATACAGTATGTCCGTaGCAGTCTTCTGATATACTTGTCCGGTATCTGTAT +
Preference number: 3 (lower is better)
Translates to: HSLWLSGYTVCP*QSSDILVRYLY
Trigger: ATACAGATACCGGACAAGTATATCAGAAGACTGTCACGGACATACTGTATAGCCTGAAAGCCACAGGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
3UTR GCA 72 bp GATTTGATCTCCTACCCTCATCCTCCCATTCCTTATTaGTGGTCCATCTTCTGCCAGTCTCAACACATACAA +
Preference number: 3 (lower is better)
Translates to: DLISYPHPPIPY*WSIFCQSQHIQ
Trigger: TTGTATGTGTTGAGACTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGATGAGGGTAGGAGATCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 72 bp AGGCTCATTGACTTTCAGTGTCCTAAGTCCACAAATTaGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTT +
Preference number: 3 (lower is better)
Translates to: RLIDFQCPKSTN*QMGKPGLSLIL
Trigger: AAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGGACTTAGGACACTGAAAGTCAATGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CCA 72 bp TTGATCTCCTACCCTCATCCTCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCTCAACACATACAAATC +
Preference number: 3 (lower is better)
Translates to: LISYPHPPIPYC*SIFCQSQHIQI
Trigger: GATTTGTATGTGTTGAGACTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGATGAGGGTAGGAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 72 bp ATCCAAATCCTTTGGCTCCTTTCTCCATGTCCACAGTaGAATAATCAAAATCCTGGGGTTGTCTGTAGTCCG +
Preference number: 3 (lower is better)
Translates to: IQILWLLSPCPQ*NNQNPGVVCSP
Trigger: CGGACTACAGACAACCCCAGGATTTTGATTATTTCACTGTGGACATGGAGAAAGGAGCCAAAGGATTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CCA 72 bp TTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATaGGTAATTGTTGCTAGTGCAGTTCCTGTAGTAGCA +
Preference number: 3 (lower is better)
Translates to: FCNFLPRSWEAL*VIVASAVPVVA
Trigger: TGCTACTACAGGAACTGCACTAGCAACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CCA 72 bp CCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTTGCCTACTTTCATAAA +
Preference number: 3 (lower is better)
Translates to: PYNLDQRNPFEN*SWVALVAYFHK
Trigger: TTTATGAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATCTGAAGATATGTTGCTaGTCTCTGGCCCCAGTTACA +
Preference number: 3 (lower is better)
Translates to: SSHTHRCPERSYISYFKHLKICC*SLAPVT
Trigger: TGTAACTGGGGCCAGAGACAAGCAACATATCTTCAG...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
3UTR-3UTR CAA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATCCTATTTCCATACTTaGCCCGGGACACTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQSYFHT*PGTLRP
Trigger: TGGCCTGAGTGTCCCGGGCAAAGTATGGAAATAGGA...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CCA 72 bp ATGGGACAGTCCTTAAGTATATCCACTACTTCTGTATaGCTCAGGTTCTGTACATTCTGCTGGTTGATCTCA +
Preference number: 3 (lower is better)
Translates to: MGQSLSISTTSV*LRFCTFCWLIS
Trigger: TGAGATCAACCAGCAGAATGTACAGAACCTGAGCCATACAGAAGTAGTGGATATACTTAAGGACTGTCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAGGAGGTGGAGCTTATTaGCATTTGAACTCCTGTAAA +
Preference number: 3 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVGGGAY*HLNSCK
Trigger: TTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCC...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAGAGCTTCTACCACACTaGGCACTGTTCCTATTTCCA +
Preference number: 3 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQELLPH*ALFLFP
Trigger: TGGAAATAGGAACAGTGCCAAGTGTGGTAGAAGCTC...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CAA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 3 (lower is better)
Translates to: SSHTHRCPERSYISYFKHRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR TCA 72 bp TGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTaGGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAA +
Preference number: 3 (lower is better)
Translates to: WKLLLQAARSFT*GFQPYSPPVKQ
Trigger: TTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR TCA 72 bp GTTGCTAGTGCAGTTCCTGTAGTAGCAGAAGTGTCCTaGACAGCATCATTCCAAACTGTGAAAAGATTTTTC +
Preference number: 3 (lower is better)
Translates to: VASAVPVVAEVS*TASFQTVKRFF
Trigger: GAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGACACTTCTGCTACTACAGGAACTGCACTAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CAA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 3 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCGCCTTCAGAAACACTTaGCCTTTTAATATGTGTAGC +
Preference number: 3 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLAFRNT*PFNMCS
Trigger: GCTACACATATTAAAAGGCAAAGTGTTTCTGAAGGC...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTACACTACAGAAGCATaGTCCAAAACCAGATTCAAT +
Preference number: 3 (lower is better)
Translates to: CKILHLRLSALFSSCQTTYTTEA*SKTRFN
Trigger: ATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp AAGATGAACATCCAATTCCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTGGTCCTGGGTGGCACTaGTTGCCTACTTTCATAAAT +
Preference number: 3 (lower is better)
Translates to: KMNIQFLIIWTRGIHSKTGPGWH*LPTFIN
Trigger: ATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC...AGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGGAATTGGATGTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 3 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSLAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 3 (lower is better)
Translates to: LEIAFTSCKILHLRLSALKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTATACACTACAGAAGCATaGTCCAAAACCAGATTCAAT +
Preference number: 3 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVYTTEA*SKTRFN
Trigger: ATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTA...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATTTAGTGAGCAGATGTaGGGCTACAACACTACCACT +
Preference number: 3 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQFSEQM*GYNTTT
Trigger: AGTGGTAGTGTTGTAGCCCAACATCTGCTCACTAAA...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR GCA 72 bp ACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTaGTGGGAAACAACAACTTTAAAGATGTTTGAAGAC +
Preference number: 3 (lower is better)
Translates to: TRAMLSVVSIMG*WETTTLKMFED
Trigger: GTCTTCAAACATCTTTAAAGTTGTTGTTTCCCAGCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR-3UTR CAA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAAGCTGTTTTGAGTGCTTaGAATAGGCAACCACATGTT +
Preference number: 3 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQAVLSA*NRQPHV
Trigger: AACATGTGGTTGCCTATTCAAAGCACTCAAAACAGC...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CAA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAAGAGCATACACTTACATaGGTGAGTGTTGTGGTATGT +
Preference number: 3 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQEHTLT*VSVVVC
Trigger: ACATACCACAACACTCACCAATGTAAGTGTATGCTC...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR GCA 72 bp AGTTTACATTTTAAACTTCACACCCTGAAGATATGTTaGTTGTCTCTGGCCCCAGTTACAAATCCTTTGAGA +
Preference number: 3 (lower is better)
Translates to: SLHFKLHTLKIC*LSLAPVTNPLR
Trigger: TCTCAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAGTTTAAAATGTAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
3UTR GCA 72 bp AAAAACCAATTCCCTCATCCCCAAACACAAACCAAATaGAAAGACCACTTTGATTACTTGTGGAGTAAATGG +
Preference number: 3 (lower is better)
Translates to: KNQFPHPQTQTK*KDHFDYLWSKW
Trigger: CCATTTACTCCACAAGTAATCAAAGTGGTCTTTGCATTTGGTTTGTGTTTGGGGATGAGGGAATTGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR-3UTR CAA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACCTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 3 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYLAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCATAAGTGAAATCACATaGCTGACAAAGAAGCTATCC +
Preference number: 3 (lower is better)
Translates to: KIKLLLRILQLQGEGMISISEIT*LTKKLS
Trigger: GGATAGCTTCTTTGTCAGCAATGTGATTTCACTTAT...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGGAGGTGGAGCTTATTaGCATTTGAACTCCTGTAAA +
Preference number: 3 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYGGGAY*HLNSCK
Trigger: TTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR GCA 72 bp AAAGATATAATCTTGTCTCAGTTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCGATATTCCAGTTTGTG +
Preference number: 3 (lower is better)
Translates to: KDIILSQFQLAP*SLIFKAIFQFV
Trigger: CACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTATATCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 3 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 3 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAATAAGTGAAATCACATaGCTGACAAAGAAGCTATCC +
Preference number: 3 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAISEIT*LTKKLS
Trigger: GGATAGCTTCTTTGTCAGCAATGTGATTTCACTTAT...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR-3UTR CAA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGCCTTCAGAAACACTTaGCCTTTTAATATGTGTAGC +
Preference number: 3 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYAFRNT*PFNMCS
Trigger: GCTACACATATTAAAAGGCAAAGTGTTTCTGAAGGC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR TCA 72 bp CATTTTAGCAACTTACTGAGCATACACTTACATTGGTaGGTGTTGTGGTATGTAAATTATATCACATGGTGT +
Preference number: 3 (lower is better)
Translates to: HFSNLLSIHLHW*VLWYVNYITWC
Trigger: ACACCATGTGATATAATTTACATACCACAACACTCACCAATGTAAGTGTATGCTCAGTAAGTTGCTAAAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR GCA 72 bp TTTAGAGAAAAACCAATTAAGATCTATGAGCTAAACTaGAAAATTCTGACTTATGGCAAACTGTTCCCTAGG +
Preference number: 3 (lower is better)
Translates to: FREKPIKIYELN*KILTYGKLFPR
Trigger: CCTAGGGAACAGTTTGCCATAAGTCAGAATTTTGCAGTTTAGCTCATAGATCTTAATTGGTTTTTCTCTAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGGCGCGGCTCATCTGCTaGCGGCCGAGGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: SLGRAALCGLAERSLCSPARLIC*RPRRRV
Trigger: AACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCCGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGRAGWP*PRGSSA
Trigger: AGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCG...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CAA 72 bp GCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGCTaGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: AAEAPGLRTLGS*SEPGTFQGPGA
Trigger: CGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQAERSL*SPRRCF
Trigger: GAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGC...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGGCTGTTGGGGGTGGCTaGGCTTGGCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQAVGGG*AWLGQG
Trigger: CCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGC...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGCAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SLGRAALCGLAERSLCSPQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGCTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGTACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLYFRQT*GGGSGR
Trigger: TCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTA...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: SLGRAALCGLAERSLCSPSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGTGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQCSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGCTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGAGTTCAAAGCCCAGCTaGCCCTCCGGGTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLGRAALCGLAERSLCSPSSKPS*PSGFLP
Trigger: TGGCAGGAACCCGGAGGGCCAGCTGGGCTTTGAACT...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGCCTGGGCTTATCTGGTaGGAAGGGTCGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPPGLIW*EGSEGG
Trigger: CCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGG...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CAA 72 bp CGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTGTCAGAACCCGGCACC +
Preference number: 4 (lower is better)
Translates to: RAAHLLAAEAPG*RTLGSLSEPGT
Trigger: GGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDALVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGCTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: SLGRAALCGLAERSLCSPLVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGCCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLTEGTA*CRGSAA
Trigger: GGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGT...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDARAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCTCCGACAGAGGGTACTaGCTGGTGTCGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRSDRGY*LVSGEC
Trigger: GCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGA...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGAGGCGCTGCTTCTTCTaGCCGCAGGCTGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLRRCFF*PQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCT...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGCGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQRKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGTTTTGGACATGGCAGTaGGGCGAGTCGCCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPFWTWQ*GESPQF
Trigger: GAACTGAGGCGACTCGCCCCACTGCCATGTCCAAAA...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCTGGCCTTGTGGTGCATaGCACCGTGCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCWPCGA*HRAEVE
Trigger: CTCTACCTCCGCACGGTGCCATGCACCACAAGGCCA...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCTCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGSLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGCCGGGTTCCTGCCAATaGCACTCTCATGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLPGSCQ*HSHGLC
Trigger: GCAAAGTCCATGAGAGTGTCATTGGCAGGAACCCGG...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR TCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDALPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGCGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLRRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCCTCCGACACCAATTTaGTGCCGCTCTCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAPPTPI*CRSHRP
Trigger: TGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR GCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRRLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCCCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCCTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCLVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGATCCCAAGTTGGGCCTaGGCTTATCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLIPSWA*AYLVGR
Trigger: CCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGAT...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGATCCCAAGTTGGGCCTaGGCTTATCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQIPSWA*AYLVGR
Trigger: CCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGAT...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGTACCATTCCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLGRAALCGLAERSLCSPYHSIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGGAATGGTA...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGATTACGTGTGACCTTTaGGATGGACCTGATCGCCCC +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLITCDL*DGPDRP
Trigger: GGGGCGATCAGGTCCATCTCAAAGGTCACACGTAAT...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR GCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGTTTTCCATCCTGTGCTaGAGGCCCATCCGGAATCAC +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLFSILC*RPIRNH
Trigger: GTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAA...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGCATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCCCTCCCATTCCTTATTaGTGGTCCATCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGPPIPY*WSIFCQ
Trigger: CTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGG...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGCAGGAGGCTCTATACTaGCTTTCTCCATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLGRAALCGLAERSLCSPQEALY*LSPCCS
Trigger: TGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTG...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCCACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCTACTCCATTTCCATTaGCCACAGGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDALLHFH*PQASLP
Trigger: AGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGTCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGCATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCTGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGTTCTGCTGGCGGCTTTaGGGTACCGTAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQFCWRL*GTVVIV
Trigger: GACAATTACTACGGTACCCCAAAGCCGCCAGCAGAA...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGCAGGAGGCTCTATACTaGCTTTCTCCATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPQEALY*LSPCCS
Trigger: TGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTG...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCATCAGGCAATGGGTCTaGTTCCTCATTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGIRQWV*FLIVFR
Trigger: CCTGAAGACAATGAGGAACCAGACCCATTGCCTGAT...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQNVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTGGGGCTGTTGGGGGTaGCTGGGCTTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSWGCWG*LGLAGP
Trigger: TGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCCA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLRLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSYFRQT*GGGSGR
Trigger: TCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMRAGWP*PRGSSA
Trigger: AGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCG...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCTCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGTTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGGCTTGTCACTTTTCATaGACATGGAGAGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPACHFS*TWRDWK
Trigger: CTTCCAGTCTCTCCATGTGCATGAAAAGTGACAAGC...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCGCTTGTCACTTTTCATaGACATGGAGAGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGACHFS*TWRDWK
Trigger: CTTCCAGTCTCTCCATGTGCATGAAAAGTGACAAGC...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTTATGTGGCCTTGTGGTaGCTAGAGCTCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAYVALW*LELCSK
Trigger: CTTTGAACAGAGCTCTAGGCACCACAAGGCCACATA...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGCCAGTTATCAGGCAATaGGTCTGGTTCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLPVIRQ*VWFLIV
Trigger: GACAATGAGGAACCAGACCCATTGCCTGATAACTGG...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGATGCGTCCGATTTTATaGGGCACAGTTATAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SLGRAALCGLAERSLCSPMRPIL*GTVIVD
Trigger: ATCCACTATAACTGTGCCCCATAAAATCGGACGCAT...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGCTGTTGGGGGTGGCTaGGCTTGGCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRAVGGG*AWLGQG
Trigger: CCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGGCTGTTGGGGGTGGCTaGGCTTGGCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGAVGGG*AWLGQG
Trigger: CCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGC...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCTTGTGTTATGGTCAATaGAGTAGACTTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGLCYGQ*SRLRPS
Trigger: AGAAGGGCGAAGTCTACTTCATTGACCATAACACAA...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCCCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRPRRRV*GRWAAC
Trigger: ACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGG...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATCCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYPRRRV*GRWAAC
Trigger: ACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGG...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTAGAATATGGAAAGGATaGAGCCTCATTCATTCGGGC +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDARIWKG*SLIHSG
Trigger: GCCCGAATGAATGAGGCTTCATCCTTTCCATATTCT...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRNSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCCAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCTCCGACAGAGGGTACTaGCTGGTGTCGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGSDRGY*LVSGEC
Trigger: GCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGA...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCAGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGAAATATGGGGACCCATaGTTGTCACTTTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPKYGDP*LSLFMH
Trigger: GTGCATGAAAAGTGACAAGCATGGGTCCCCATATTT...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCCCAATGACACTCTCATaGACTTTGCTAGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCPMTLS*TLLVQW
Trigger: CCACTGGACTAGCAAAGTCCATGAGAGTGTCATTGG...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCATCAGGCAATGGGTCTaGTTCCTCATTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCIRQWV*FLIVFR
Trigger: CCTGAAGACAATGAGGAACCAGACCCATTGCCTGAT...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCCCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATGGGGGTGGCTGGGCTTaGCTGGGCCAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDGGGWA*LGQGTL
Trigger: CAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCC...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTGGGGCTGTTGGGGGTaGCTGGGCTTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRWGCWG*LGLAGP
Trigger: TGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCCA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCCTGGGCTTATCTGGTaGGAAGGGTCGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSPGLIW*EGSEGG
Trigger: CCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGCGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSRAGWP*PRGSSA
Trigger: AGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCG...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGGTCCTTGCAGTGTTTaGTCACGGCCAGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSGPCSV*SRPARP
Trigger: GGGACGTGCTGGCCGTGATCAAACACTGCAAGGACC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR TCA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGCTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLLHVAH*FIPLPF
Trigger: AAACGGAAGAGGAATAAATCAGTGAGCAACATGGAG...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCAAGATCCTTCACTTaGGGCTTTCAGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCARSFT*GFQPYS
Trigger: AGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGC...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPAERSL*SPRRCF
Trigger: GAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGC...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCCTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTAAATATGGGGACCCATaGTTGTCACTTTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAKYGDP*LSLFMH
Trigger: GTGCATGAAAAGTGACAAGCATGGGTCCCCATATTT...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCGAAGCCCTGGGCACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGEALGT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTGCCCAGGGCTTC...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGTGTCTTCATGTTCACTaGATTCTGGTGTTACTACTA +
Preference number: 4 (lower is better)
Translates to: SLGRAALCGLAERSLCSPCLHVH*ILVLLL
Trigger: TAGTAGTAACACCAGAATCCAGTGAACATGAAGACA...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDYFRQT*GGGSGR
Trigger: TCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTAGGCGCTGCTTCTTCTaGCCGCAGGCTGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSRRCFF*PQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCT...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGCGCGGCTCATCTGCTaGCGGCCGAGGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLARLIC*RPRRRV
Trigger: AACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCCACTTTTCATGCACATaGAGAGACTGGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRHFSCT*RDWKVP
Trigger: TGGTACCTTCCAGTCTCTCCATGTGCATGAAAAGTG...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSRKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCCGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFRAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGTCTTCAGGTTTAGTTaGCTTTGTGTCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: SLSEPGTFQGPGATAALRVFRFS*LCVIHL
Trigger: CAGATGGATGACACAAAGCCAACTAAACCTGAAGAC...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCCCAATAGGAACAGACTaGAAAAGTTTGACAACATCT +
Preference number: 4 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGPIGTD*KSLTTS
Trigger: AGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGG...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCATGCGTCCGATTTTATaGGGCACAGTTATAGTGGAT +
Preference number: 4 (lower is better)
Translates to: AACQNPAPSRAPARRRPCMRPIL*GTVIVD
Trigger: ATCCACTATAACTGTGCCCCATAAAATCGGACGCAT...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRTEGTA*CRGSAA
Trigger: GGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGT...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCAAGGCGCTGCTTCTTCTaGCCGCAGGCTGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPRRCFF*PQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCT...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCGCGGCTCATCTGCTaGCGGCCGAGGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWARLIC*RPRRRV
Trigger: AACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMGGHLP*GTCTFV
Trigger: GACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCC...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYGGHLP*GTCTFV
Trigger: GACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCC...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIPRRRV*GRWAAC
Trigger: ACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTCTCATAGGCCACCTTaGCGGGCTTCACCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRSHRPP*RASPPP
Trigger: TGGGGGAGGTGAAGCCCGGCAAGGTGGCCTATGAGA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR GCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCACGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPRKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGTGCGCCATGGGACTCTaGTTCTCTGAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMCAMGL*FSELGA
Trigger: GGCACCCAGCTCAGAGAAGCAGAGTCCCATGGCGCA...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATCCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATATGGGGCTGTTGGGGGTaGCTGGGCTTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIWGCWG*LGLAGP
Trigger: TGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCCA...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGATGGGGCTGTTGGGGGTaGCTGGGCTTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRWGCWG*LGLAGP
Trigger: TGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCCA...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAATACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEYFRQT*GGGSGR
Trigger: TCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTA...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCAGGCGCTGCTTCTTCTaGCCGCAGGCTGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRRRCFF*PQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCT...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCACTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPLPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCACTGTTGAGCTCCTCCTaGGGAATGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPLLSSS*GMMRRV
Trigger: CACCCTTCGCATCATTCCTCAGGAGGAGCTCAACAG...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCCTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFLLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRRLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGCCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCCCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCAGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDACVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGGGGGGTGGCTGGGCTTaGCTGGGCCAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPREGGGWA*LGQGTL
Trigger: CAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCC...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGGGGGTGGCTGGGCTTaGCTGGGCCAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERGGGWA*LGQGTL
Trigger: CAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCCTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDALVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGCGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGRAGWP*PRGSSA
Trigger: AGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCG...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCCTACTCCATTTCCATTaGCCACAGGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGLLHFH*PQASLP
Trigger: AGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAG...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATCTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYLPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCCTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRLPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMRRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATCCGACACCAATTTGCTaGCGCTCTCATAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYPTPIC*RSHRPP
Trigger: AGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGG...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR GCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSTVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTCAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGCAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGTGCGCCATGGGACTCTaGTTCTCTGAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSCAMGL*FSELGA
Trigger: GGCACCCAGCTCAGAGAAGCAGAGTCCCATGGCGCA...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATATCCGACAGAGGGTACTaGCTGGTGTCGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKISDRGY*LVSGEC
Trigger: GCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGA...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCCTCCCATTCCTTATTaGTGGTCCATCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSPPIPY*WSIFCQ
Trigger: CTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQAERSL*SPRRCF
Trigger: GAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGC...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTTTTGGACATGGCAGTaGGGCGAGTCGCCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRFWTWQ*GESPQF
Trigger: GAACTGAGGCGACTCGCCCCACTGCCATGTCCAAAA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTTTTGGACATGGCAGTaGGGCGAGTCGCCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAFWTWQ*GESPQF
Trigger: GAACTGAGGCGACTCGCCCCACTGCCATGTCCAAAA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTCAAGCTTTTGGACATaGCAGTGGGGCGAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDASSFWT*QWGESP
Trigger: AGGCGACTCGCCCCACTGCCATGTCCAAAAGCTTGA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCTTCAGCACTTGGAGTaGCTCCTGGAAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSLQHLE*LLEVSG
Trigger: ACCAGATACTTCCAGGAGCCACTCCAAGTGCTGAAG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCCTTCAGCACTTGGAGTaGCTCCTGGAAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGLQHLE*LLEVSG
Trigger: ACCAGATACTTCCAGGAGCCACTCCAAGTGCTGAAG...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAACCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTTCGAAAACTGGTCCTaGGTGGCACTTGTTGCCTAC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSFENWS*VALVAY
Trigger: GTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGGGGGTGGCTGGGCTTaGCTGGGCCAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQGGGWA*LGQGTL
Trigger: CAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCC...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAACCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGACCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRTEGTA*CRGSAA
Trigger: GGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGT...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKITEGTA*CRGSAA
Trigger: GGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTACCTGGGCTTATCTGGTaGGAAGGGTCGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLPGLIW*EGSEGG
Trigger: CCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGG...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCATCCCAAGTTGGGCCTaGGCTTATCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRIPSWA*AYLVGR
Trigger: CCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGAT...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAGCGCGGCTCATCTGCTaGCGGCCGAGGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGARLIC*RPRRRV
Trigger: AACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHRAGWP*PRGSSA
Trigger: AGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTACCATTCCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSYHSIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGGAATGGTA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CAA 72 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAA +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQA*VPRGSMRVTVK
Trigger: TTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEGGHLP*GTCTFV
Trigger: GACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCC...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIGGHLP*GTCTFV
Trigger: GACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCC...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTTGGGTGGCCCCAGATaGAGCCATAGACACATTGTC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRLGGPR*SHRHIV
Trigger: GACAATGTGTCTATGGCTTCATCTGGGGCCACCCAA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAACCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQPRRRV*GRWAAC
Trigger: ACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGG...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGAAACATGTCATGGGTaGACGGTTCCGAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSETCHG*TVPNVS
Trigger: TGACACATTCGGAACCGTTCACCCATGACATGTTTC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISRKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGTGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFTVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRTVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISRLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GCCTTATTTGTGCCCACAGCCTGTGGCTTTCAGGCTATACAGTATGTCCGTGACCAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: ALFVPTACGFQAIQYVRDQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...GTCACGGACATACTGTATAGCCTGAAAGCCACAGGCTGTGGGCACAAATAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR GCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCCAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGATGCGCCATGGGACTCTaGTTCTCTGAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRCAMGL*FSELGA
Trigger: GGCACCCAGCTCAGAGAAGCAGAGTCCCATGGCGCA...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCTCGCACACTCACAGATaGCCTGAAAGGTCCTACATT +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGSHTHR*PERSYI
Trigger: AATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGA...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCACCCTGAAGATATGTTaGTTGTCTCTGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGTLKIC*LSLAPV
Trigger: AACTGGGGCCAGAGACAAGCAACATATCTTCAGGGT...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTGATGAGAGGGACGGCTaGGCAGAGGTAGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISDERDG*AEVGEL
Trigger: AAGCTCTCCTACCTCTGCCCAGCCGTCCCTCTCATC...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000419488.5
CDS-3UTR CCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTAGTTCAAAGCCCAGCTaGCCCTCCGGGTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFSSKPS*PSGFLP
Trigger: TGGCAGGAACCCGGAGGGCCAGCTGGGCTTTGAACT...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATGGCCTTGTGGTGCATaGCACCGTGCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLWPCGA*HRAEVE
Trigger: CTCTACCTCCGCACGGTGCCATGCACCACAAGGCCA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTGGTGCTGGTTCTGCTaGCGGCTTTGGGGTACCGTA +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISWCWFC*RLWGTV
Trigger: TACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCA...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCAGGAGGCTCTATACTaGCTTTCTCCATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSQEALY*LSPCCS
Trigger: TGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCTTCGAAAACTGGTCCTaGGTGGCACTTGTTGCCTAC +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFFENWS*VALVAY
Trigger: GTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAA...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522391.3
ENST00000626691.2
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGGGTTTTGCCGGCTACTGGAATCCCATCAACATACACAAGCTCATCTCCTGGCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VGFAGYWNPINIHKLISWLVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...CCAGGAGATGAGCTTGTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGGGGTGGCTGGGCTTaGCTGGGCCAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKGGGWA*LGQGTL
Trigger: CAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GTGGGTTTTGCCGGCTACTGGAATCCCATCAACATACACAAGCTCATCTCCTGGGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VGFAGYWNPINIHKLISWGGHLP*GTCTFV
Trigger: GACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCC...CCAGGAGATGAGCTTGTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTCAGCTCCTCAGGCTaGCTGTACACTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISFSSSG*LYTGAG
Trigger: TCCTGCACCAGTGTACAGTCAGCCTGAGGAGCTGAA...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDSCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTTGGGTGGCCCCAGATaGAGCCATAGACACATTGTC +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDLGGPR*SHRHIV
Trigger: GACAATGTGTCTATGGCTTCATCTGGGGCCACCCAA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CTGTCGGCTGAGCCCATGGCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: LSAEPMAMTAPIKIGCPGAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...GCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGCCATGGGCTCAGCCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGPRRRV*GRWAAC
Trigger: ACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATATGGTGCATGGCACCGTaGGGAGGTAGAGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIWCMAP*GGRGCH
Trigger: GTGACAACCTCTACCTCCGCACGGTGCCATGCACCA...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR GCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATGGTGCATGGCACCGTaGGGAGGTAGAGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLWCMAP*GGRGCH
Trigger: GTGACAACCTCTACCTCCGCACGGTGCCATGCACCA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR GCA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTTTTCCATCCTGTGCTaGAGGCCCATCCGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDFSILC*RPIRNH
Trigger: GTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GTGCCCACAGCCTGTGGCTTTCAGGCTATACAGTATGTCCGTGACAGTCTTCTGAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VPTACGFQAIQYVRDSLLRLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...CAGAAGACTGTCACGGACATACTGTATAGCCTGAAAGCCACAGGCTGTGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR GCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRRLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACACAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCCAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCTTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSSGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPRECALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCTACAGTACCAGGACGTaGAGCTACACTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFYSTRT*SYTTEA
Trigger: TGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTA...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCTCAAAGATGAAGCATaGAGCACTTCTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSLKDEA*STSLSL
Trigger: GAGAGAGAGAGAAGTGCTGCATGCTTCATCTTTGAG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGTCCCTCTTCTTTGGATaGAGTGTGGACGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMSLFFG*SVDEEW
Trigger: CCATTCCTCGTCCACACTCCATCCAAAGAAGAGGGA...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000419488.5
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTTCTGCTGGCGGCTTTaGGGTACCGTAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRFCWRL*GTVVIV
Trigger: GACAATTACTACGGTACCCCAAAGCCGCCAGCAGAA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATGGTGCTGGTTCTGCTaGCGGCTTTGGGGTACCGTA +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLWCWFC*RLWGTV
Trigger: TACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGATGGTGCTGGTTCTGCTaGCGGCTTTGGGGTACCGTA +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRWCWFC*RLWGTV
Trigger: TACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCA...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATCTTCAGCACTTGGAGTaGCTCCTGGAAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYLQHLE*LLEVSG
Trigger: ACCAGATACTTCCAGGAGCCACTCCAAGTGCTGAAG...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCACAGGAGGCTCTATACTaGCTTTCTCCATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPQEALY*LSPCCS
Trigger: TGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTG...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTTCGAAAACTGGTCCTaGGTGGCACTTGTTGCCTAC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRFENWS*VALVAY
Trigger: GTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTACGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKILRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGACTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRLRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATCAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPLVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTGGGGGTGGCTGGGCTTaGCTGGGCCAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTGGGWA*LGQGTL
Trigger: CAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCC...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAATGGGGCTGTTGGGGGTaGCTGGGCTTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEWGCWG*LGLAGP
Trigger: TGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCCA...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGTCGGCTGAGCCCATGGCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCTCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSAEPMAMTAPIKIGCPGSLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...GCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGCCATGGGCTCAGCCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKILVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGACTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRLVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CACTTCCGACCTGTAACTATTTTCGTGTCCTTGCAGCTGAAGTGGTTGAGGTGGACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HFRPVTIFVSLQLKWLRWTEGTA*CRGSAA
Trigger: GGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGT...CCACCTCAACCACTTCAGCTGCAAGGACACGAAAATAGTTACAGGTCGGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKYFRQT*GGGSGR
Trigger: TCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCCTGGGCTTATCTGGTaGGAAGGGTCGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPPGLIW*EGSEGG
Trigger: CCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCATTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTG +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPFDIPS*AWAYLV
Trigger: CACCAGATAAGCCCAGGCCCAACTTGGGATATCAAA...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCTTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFFDIPS*AWAYLV
Trigger: CACCAGATAAGCCCAGGCCCAACTTGGGATATCAAA...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRAKGEP*KHVMGE
Trigger: TTCACCCATGACATGTTTCCATGGCTCACCCTTGGC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATCCTTATGTGGCCTTGTaGTGCCTAGAGCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYPYVAL*CLELCS
Trigger: TGAACAGAGCTCTAGGCACCACAAGGCCACATAAGG...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CATGTGCCTGTAGTCCTACCTACTGGAGAAGCTGAGGTGAAGGATCACTTGAGCTTCGGGAGGCTGAGGTaGGTGGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HVPVVLPTGEAEVKDHLSFGRLR*VDHEVR
Trigger: CCTGACCTCGTGATCCACCCACCTCAGCCTCCCGAA...GCTCAAGTGATCCTTCACCTCAGCTTCTCCAGTAGGTAGGACTACAGGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAATTCAGCTCCTCAGGCTaGCTGTACACTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEFSSSG*LYTGAG
Trigger: TCCTGCACCAGTGTACAGTCAGCCTGAGGAGCTGAA...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCTCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFSWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCCAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTGGGTGGCCCCAGATaGAGCCATAGACACATTGTC +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISLGGPR*SHRHIV
Trigger: GACAATGTGTCTATGGCTTCATCTGGGGCCACCCAA...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGCTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLLPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACAAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCTCTCCATGTCCACAGTaGAATAATCAAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGSPCPQ*NNQNPG
Trigger: CCCAGGATTTTGATTATTTCACTGTGGACATGGAGA...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAACGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWERRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAACTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWELLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCACCTTTGAGATGGACCTaGTCGCCCCTTTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPPLRWT*SPLLLF
Trigger: AAAAAGTAAAAGGGGCGATCAGGTCCATCTCAAAGG...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTATTACGTGTGACCTTTaGGATGGACCTGATCGCCCC +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISITCDL*DGPDRP
Trigger: GGGGCGATCAGGTCCATCTCAAAGGTCACACGTAAT...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCAGGAATGGGATTTAGATaGTGTGCTGTCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPGMGFR*CAVFTG
Trigger: ACCTGTGAAGACAGCACATCATCTAAATCCCATTCC...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTCAAACCACCTGTACTaGTCCAACCCATTCGCAGAT +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYSNHLY*SNPFAD
Trigger: ATCTGCGAATGGGTTGGATCAGTACAGGTGGTTTGA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGTCAAACCACCTGTACTaGTCCAACCCATTCGCAGAT +
Preference number: 4 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGSNHLY*SNPFAD
Trigger: ATCTGCGAATGGGTTGGATCAGTACAGGTGGTTTGA...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp CATGTGCCTGTAGTCCTACCTACTGGAGAAGCTGAGGTGAAGGATCACTTGAGCGACCACCCATGGTCCTaGTATAAGGACCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: HVPVVLPTGEAEVKDHLSDHPWS*YKDPGL
Trigger: CAGGCCTGGGTCCTTATATCAGGACCATGGGTGGTC...GCTCAAGTGATCCTTCACCTCAGCTTCTCCAGTAGGTAGGACTACAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGACTGACTGTACACTGGTaGAGGATAAGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRLTVHW*RIRLGG
Trigger: CCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GCCAGAACTTCAGCCCTCACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGCGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ARTSALTLFCNFLPRSWERKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...CTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGTGAGGGCTGAAGTTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATATCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKISLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACAACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTTVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPTVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERTVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGCAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCATTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAATGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKECSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAATGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRECSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTACAGTACCAGGACGTaGAGCTACACTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRYSTRT*SYTTEA
Trigger: TGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCCAATGACACTCTCATaGACTTTGCTAGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMPMTLS*TLLVQW
Trigger: CCACTGGACTAGCAAAGTCCATGAGAGTGTCATTGG...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCAGTTCAAAGCCCAGCTaGCCCTCCGGGTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERSSKPS*PSGFLP
Trigger: TGGCAGGAACCCGGAGGGCCAGCTGGGCTTTGAACT...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCCCTTATGTGGCCTTGTaGTGCATGGCACCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVPYVAL*CMAPCG
Trigger: TCCGCACGGTGCCATGCACCACAAGGCCACATAAGG...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCAGGAGGCTCTATACTaGCTTTCTCCATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMQEALY*LSPCCS
Trigger: TGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTG...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCATCAGGCAATGGGTCTaGTTCCTCATTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAIRQWV*FLIVFR
Trigger: CCTGAAGACAATGAGGAACCAGACCCATTGCCTGAT...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATCCAGTTATCAGGCAATaGGTCTGGTTCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYPVIRQ*VWFLIV
Trigger: GACAATGAGGAACCAGACCCATTGCCTGATAACTGG...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCCCAGTTATCAGGCAATaGGTCTGGTTCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAPVIRQ*VWFLIV
Trigger: GACAATGAGGAACCAGACCCATTGCCTGATAACTGG...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCTCGTAGAGCTCATATaGATCAGGCTTCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISLVELI*IRLPWV
Trigger: GACCCACGGAAGCCTGATCCATATGAGCTCTACGAG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTCTCGTAGAGCTCATATaGATCAGGCTTCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPLVELI*IRLPWV
Trigger: GACCCACGGAAGCCTGATCCATATGAGCTCTACGAG...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCTAGTCAGTGGTATGGATGCCTTATTTGTGCCCACAGCCTGTGGCTTTCAGGCGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASQWYGCLICAHSLWLSGGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...GCCTGAAAGCCACAGGCTGTGGGCACAAATAAGGCATCCATACCACTGACTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGGGTTTTGCCGGCTACTGGAATCCCATCAACATACACAAGCTCATCTCCTGGCGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VGFAGYWNPINIHKLISWRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...CCAGGAGATGAGCTTGTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGLVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATGCTGTTGGGGGTGGCTaGGCTTGGCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHAVGGG*AWLGQG
Trigger: CCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGC...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAATGGGGCTGTTGGGGGTaGCTGGGCTTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKWGCWG*LGLAGP
Trigger: TGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCCA...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGTGTGGGGCTGTTGGGGGTaGCTGGGCTTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VWFHILPCFHFRPVTIFVWGCWG*LGLAGP
Trigger: TGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCCA...CACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCCTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVLVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAGGGTTCGTCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRGFVIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGACGAACCC...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTATCCCAAGTTGGGCCTaGGCTTATCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFIPSWA*AYLVGR
Trigger: CCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGAT...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAGCACACCGGACACGTaGGACTTCACGTCGATGCTC +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVSTPDT*DFTSML
Trigger: GAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCT...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCACATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 4 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCCACTTTTCATGCACATaGAGAGACTGGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFHFSCT*RDWKVP
Trigger: TGGTACCTTCCAGTCTCTCCATGTGCATGAAAAGTG...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTGATTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTDFRQT*GGGSGR
Trigger: TCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAATC...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTCACGAATGATTTGCTaGAGCTCATGGTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRSRMIC*SSWSTE
Trigger: TTCTGTGGACCATGAGCTTCAGCAAATCATTCGTGA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR TCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCCTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFLHVAH*FIPLPF
Trigger: AAACGGAAGAGGAATAAATCAGTGAGCAACATGGAG...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEGGHLP*GTCTFV
Trigger: GACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCC...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGTCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMSWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCTACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATTGGGTGGCCCCAGATaGAGCCATAGACACATTGTC +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLLGGPR*SHRHIV
Trigger: GACAATGTGTCTATGGCTTCATCTGGGGCCACCCAA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTTGATTTCAATGATTTaGTCTCCTACCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSLISMI*SPTLIL
Trigger: GAGGATGAGGGTAGGAGATCAAATCATTGAAATCAA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGCCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQPRRRV*GRWAAC
Trigger: ACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGG...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCGATATTCCAGTTTGTaGTTGCTCTTAACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSRYSSL*LLLTLS
Trigger: GGACAAAGTTAAGAGCAATCACAAACTGGAATATCG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCCCTTTGAGATGGACCTaGTCGCCCCTTTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAPLRWT*SPLLLF
Trigger: AAAAAGTAAAAGGGGCGATCAGGTCCATCTCAAAGG...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGAATGGGATTTAGATaGTGTGCTGTCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYGMGFR*CAVFTG
Trigger: ACCTGTGAAGACAGCACATCATCTAAATCCCATTCC...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCGGAATGGGATTTAGATaGTGTGCTGTCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAGMGFR*CAVFTG
Trigger: ACCTGTGAAGACAGCACATCATCTAAATCCCATTCC...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCTTAAACTTCACACCCTaGAGATATGTTGCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGLNFTP*RYVACL
Trigger: GAGACAAGCAACATATCTTCAGGGTGTGAAGTTTAA...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGTCTCATAGGCCACCTTaGCGGGCTTCACCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGSHRPP*RASPPP
Trigger: TGGGGGAGGTGAAGCCCGGCAAGGTGGCCTATGAGA...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GTGCTGCTCACAAATGCCTGGTGTTTGCTGTCCGTTTCCAAACAAGGAATCAACCGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: VLLTNAWCLLSVSKQGINRAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...GTTGATTCCTTGTTTGGAAACGGACAGCAAACACCAGGCATTTGTGAGCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGACATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGCATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKETVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPRLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAATGCGCCATGGGACTCTaGTTCTCTGAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKECAMGL*FSELGA
Trigger: GGCACCCAGCTCAGAGAAGCAGAGTCCCATGGCGCA...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCTTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYSGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTCCGACAGAGGGTACTaGCTGGTGTCGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKSDRGY*LVSGEC
Trigger: GCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFAERSL*SPRRCF
Trigger: GAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGC...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAACTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGATGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGTGGTTCTTCCATAGCTaGCAAAGCCCCCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLWFFHS*QSPHKG
Trigger: TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCA...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTGCTTTTACAAGCTaGAAGATCCTTCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSIAFTS*KILHLR
Trigger: CCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAAT...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGTCAAGCTTTTGGACATaGCAGTGGGGCGAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWSSFWT*QWGESP
Trigger: AGGCGACTCGCCCCACTGCCATGTCCAAAAGCTTGA...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATCCAATGACACTCTCATaGACTTTGCTAGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDPMTLS*TLLVQW
Trigger: CCACTGGACTAGCAAAGTCCATGAGAGTGTCATTGG...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CCA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGTTCTGCTGGCGGCTTTaGGGTACCGTAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSFCWRL*GTVVIV
Trigger: GACAATTACTACGGTACCCCAAAGCCGCCAGCAGAA...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTTTTCCTTCAGCACTTaGAGTGGCTCCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYFSFST*SGSWKY
Trigger: ATACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CTGTCGGCTGAGCCCATGGCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCCATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSAEPMAMTAPIKIGCPGHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...GCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGCCATGGGCTCAGCCGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGACTCGTAGAGCTCATATaGATCAGGCTTCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRLVELI*IRLPWV
Trigger: GACCCACGGAAGCCTGATCCATATGAGCTCTACGAG...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYNPFEN*SWVALV
Trigger: AACAAGTGCCACCCAGGACCAGTTTTCGAATGGATT...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CCA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGNPFEN*SWVALV
Trigger: AACAAGTGCCACCCAGGACCAGTTTTCGAATGGATT...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AACTGTCTGCTAGTCAGTGGTATGGATGCCTTATTTGTGCCCACAGCCTGTGGCGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: NCLLVSGMDALFVPTACGESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...GCCACAGGCTGTGGGCACAAATAAGGCATCCATACCACTGACTAGCAGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp TCTGCTAGTCAGTGGTATGGATGCCTTATTTGTGCCCACAGCCTGTGGCTTTCACGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SASQWYGCLICAHSLWLSRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...TGAAAGCCACAGGCTGTGGGCACAAATAAGGCATCCATACCACTGACTAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCCGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLLVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKLVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATGGGGGTGGCTGGGCTTaGCTGGGCCAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHGGGWA*LGQGTL
Trigger: CAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCC...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTGGGGGTGGCTGGGCTTaGCTGGGCCAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCGGGWA*LGQGTL
Trigger: CAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCC...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGAGCTGTTGGGGGTGGCTaGGCTTGGCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRAVGGG*AWLGQG
Trigger: CCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGC...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTTGGGGCTGTTGGGGGTaGCTGGGCTTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAWGCWG*LGLAGP
Trigger: TGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCCA...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCTCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVSLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGTEGTA*CRGSAA
Trigger: GGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGT...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCGGGTTCGTCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVGFVIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGACGAACCC...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQYFRQT*GGGSGR
Trigger: TCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTA...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGGCGCTGCTTCTTCTaGCCGCAGGCTGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGRRCFF*PQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCT...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGCGCGGCTCATCTGCTaGCGGCCGAGGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISARLIC*RPRRRV
Trigger: AACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIRAGWP*PRGSSA
Trigger: AGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGAGCACACCGGACACGTaGGACTTCACGTCGATGCTC +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPRESTPDT*DFTSML
Trigger: GAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCT...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGAGCACACCGGACACGTaGGACTTCACGTCGATGCTC +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPSTPDT*DFTSML
Trigger: GAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCT...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPAKGEP*KHVMGE
Trigger: TTCACCCATGACATGTTTCCATGGCTCACCCTTGGC...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGACCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CATGTGCCTGTAGTCCTACCTACTGGAGAAGCTGAGGTGAAGGATCACTTGAGCAAAGCAGCAGAGGTGTaGAGAAGGGGCCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: HVPVVLPTGEAEVKDHLSKAAEV*RRGPVL
Trigger: AAGCACAGGGCCCCTTCTCCACACCTCTGCTGCTTT...GCTCAAGTGATCCTTCACCTCAGCTTCTCCAGTAGGTAGGACTACAGGCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTTGTGTTATGGTCAATaGAGTAGACTTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDALCYGQ*SRLRPS
Trigger: AGAAGGGCGAAGTCTACTTCATTGACCATAACACAA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGTTGTGTTATGGTCAATaGAGTAGACTTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGLCYGQ*SRLRPS
Trigger: AGAAGGGCGAAGTCTACTTCATTGACCATAACACAA...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACAGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVSCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AMTAPIKIGCPGSSPPRISCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...AATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCCAGAACTTCAGCCCTCACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGTTGGGTGGCCCCAGATaGAGCCATAGACACATTGTC +
Preference number: 4 (lower is better)
Translates to: ARTSALTLFCNFLPRSWELGGPR*SHRHIV
Trigger: GACAATGTGTCTATGGCTTCATCTGGGGCCACCCAA...CTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGTGAGGGCTGAAGTTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKESSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGATCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTCTCCATGTCCACAGTaGAATAATCAAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYSPCPQ*NNQNPG
Trigger: CCCAGGATTTTGATTATTTCACTGTGGACATGGAGA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGCGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPRERRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCCTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERLLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGCTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPRELLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPLLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGTTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMLLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDALLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR TCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGAGCTTATTTGCATTTaGACTCCTGTAAAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSELICI*TPVKSK
Trigger: CTTACTCTTTACAGGAGTTCAAATGCAAATAAGCTC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCCCTCCGACACCAATTTaGTGCCGCTCTCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERPPTPI*CRSHRP
Trigger: TGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGG...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCCTGACTGTACACTGGTaGAGGATAAGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERLTVHW*RIRLGG
Trigger: CCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGCTGACTGTACACTGGTaGAGGATAAGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLLTVHW*RIRLGG
Trigger: CCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAACGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKERKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGCGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKRAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPNSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISNSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAATGCGCCATGGGACTCTaGTTCTCTGAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRECAMGL*FSELGA
Trigger: GGCACCCAGCTCAGAGAAGCAGAGTCCCATGGCGCA...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAATGCGCCATGGGACTCTaGTTCTCTGAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKECAMGL*FSELGA
Trigger: GGCACCCAGCTCAGAGAAGCAGAGTCCCATGGCGCA...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCTTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFFDEFY*SGMCHV
Trigger: GACATGACACATGCCAGAGCAATAGAACTCATCAAA...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCTGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLCSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCAAATACTCTGCCTCTaGTCTGTCAAAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMQILCL*SVKVQM
Trigger: CATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTG...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATCAAATACTCTGCCTCTaGTCTGTCAAAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYQILCL*SVKVQM
Trigger: CATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTG...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCCTTATGTGGCCTTGTaGTGCATGGCACCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQPYVAL*CMAPCG
Trigger: TCCGCACGGTGCCATGCACCACAAGGCCACATAAGG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATTCTGCTGGCGGCTTTaGGGTACCGTAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLFCWRL*GTVVIV
Trigger: GACAATTACTACGGTACCCCAAAGCCGCCAGCAGAA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGATTCTGCTGGCGGCTTTaGGGTACCGTAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRFCWRL*GTVVIV
Trigger: GACAATTACTACGGTACCCCAAAGCCGCCAGCAGAA...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTACTTGGAGTGGCTCCTaGAAGTATCTGGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISTWSGS*KYLVCY
Trigger: GTAACAGACCAGATACTTCCAGGAGCCACTCCAAGT...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACTTCAGCACTTGGAGTaGCTCCTGGAAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKILQHLE*LLEVSG
Trigger: ACCAGATACTTCCAGGAGCCACTCCAAGTGCTGAAG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGTCTTCAGGTTTAGTTaGCTTTGTGTCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMVFRFS*LCVIHL
Trigger: CAGATGGATGACACAAAGCCAACTAAACCTGAAGAC...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTTTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: AMTAPIKIGCPGSSPPRIFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...AATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLNVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKINVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTACATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGCATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGTCGGCTGAGCCCATGGCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: LSAEPMAMTAPIKIGCPGSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...GCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGCCATGGGCTCAGCCGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDASTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAACCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACAGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTCGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: YLSGARSPRTLTDALKGPRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGCGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQLRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCCAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKELVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGGGGGGTGGCTGGGCTTaGCTGGGCCAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVGGGWA*LGQGTL
Trigger: CAGAGTCCCCTGGCCCAGCCAAGCCCAGCCACCCCC...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAGCTGTTGGGGGTGGCTaGGCTTGGCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIAVGGG*AWLGQG
Trigger: CCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGC...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAGCTGTTGGGGGTGGCTaGGCTTGGCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQAVGGG*AWLGQG
Trigger: CCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGC...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGTCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPSLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIRLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQLVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTCCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGCCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGCGCGGCTCATCTGCTaGCGGCCGAGGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAARLIC*RPRRRV
Trigger: AACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAATCTCCCACCTTTCCATaGTCCTCAGTCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWESPTFP*SSVSVF
Trigger: GAAGACACTGACTGAGGACCATGGAAAGGTGGGAGA...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCCGGGTTCCTGCCAATaGCACTCTCATGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQPGSCQ*HSHGLC
Trigger: GCAAAGTCCATGAGAGTGTCATTGGCAGGAACCCGG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAGGTCCTTGCAGTGTTTaGTCACGGCCAGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKGPCSV*SRPARP
Trigger: GGGACGTGCTGGCCGTGATCAAACACTGCAAGGACC...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTGGHLP*GTCTFV
Trigger: GACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCC...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GTGCTGCTCACAAATGCCTGGTGTTTGCTGTCCGTTTCCAAACAAGGAATCAACTACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: VLLTNAWCLLSVSKQGINYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...GTTGATTCCTTGTTTGGAAACGGACAGCAAACACCAGGCATTTGTGAGCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGTTGGGTGGCCCCAGATaGAGCCATAGACACATTGTC +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPLGGPR*SHRHIV
Trigger: GACAATGTGTCTATGGCTTCATCTGGGGCCACCCAA...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTTCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTCTGTTGAGCTCCTCCTaGGGAATGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: YLSGARSPRTLTDALKGPLLSSS*GMMRRV
Trigger: CACCCTTCGCATCATTCCTCAGGAGGAGCTCAACAG...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTTGATTTCAATGATTTaGTCTCCTACCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRLISMI*SPTLIL
Trigger: GAGGATGAGGGTAGGAGATCAAATCATTGAAATCAA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACCGAGGCGCCGGGTTTaGGGACGCTGGGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQPRRRV*GRWAAC
Trigger: ACAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGGAAACATGTCATGGGTaGACGGTTCCGAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLETCHG*TVPNVS
Trigger: TGACACATTCGGAACCGTTCACCCATGACATGTTTC...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGCCCTCCTCTCAAAGATaGAGCATGCAGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWPSSQR*SMQHFS
Trigger: AGAGAAGTGCTGCATGCTTCATCTTTGAGAGGAGGG...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR TCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAATCAAACCACCTGTACTaGTCCAACCCATTCGCAGAT +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWESNHLY*SNPFAD
Trigger: ATCTGCGAATGGGTTGGATCAGTACAGGTGGTTTGA...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGTCTCATAGGCCACCTTaGCGGGCTTCACCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKESHRPP*RASPPP
Trigger: TGGGGGAGGTGAAGCCCGGCAAGGTGGCCTATGAGA...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGTCAACAATTCCTCCTTaGTTGACACACTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLSTIPP*LTHLSR
Trigger: CCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGA...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: YLSGARSPRTLTDALKGPSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGTTTTCCATCCTGTGCTaGAGGCCCATCCGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPFSILC*RPIRNH
Trigger: GTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAA...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMRFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKERLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CTGTCGGCTGAGCCCATGGCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCTCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: LSAEPMAMTAPIKIGCPGSGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...GCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGCCATGGGCTCAGCCGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATTCCGACAGAGGGTACTaGCTGGTGTCGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHSDRGY*LVSGEC
Trigger: GCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGA...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCATTGCTTTTACAAGCTaGAAGATCCTTCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAIAFTS*KILHLR
Trigger: CCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAAT...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAATATGTGGCCTTGTGGTaGCTAGAGCTCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEYVALW*LELCSK
Trigger: CTTTGAACAGAGCTCTAGGCACCACAAGGCCACATA...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAAGTTCAAAGCCCAGCTaGCCCTCCGGGTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKSSKPS*PSGFLP
Trigger: TGGCAGGAACCCGGAGGGCCAGCTGGGCTTTGAACT...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACCTTATGTGGCCTTGTaGTGCATGGCACCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGPYVAL*CMAPCG
Trigger: TCCGCACGGTGCCATGCACCACAAGGCCACATAAGG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGATGGTGCTGGTTCTGCTaGCGGCTTTGGGGTACCGTA +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGWCWFC*RLWGTV
Trigger: TACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCA...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAACTTGGAGTGGCTCCTaGAAGTATCTGGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKITWSGS*KYLVCY
Trigger: GTAACAGACCAGATACTTCCAGGAGCCACTCCAAGT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTTCCTTCAGCACTTaGAGTGGCTCCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPFSFST*SGSWKY
Trigger: ATACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAA...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGAGGCTGACTGTACACTaGTGCAGGATAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPRLTVH*CRIRLG
Trigger: TCCCAGCCTTATCCTGCACCAGTGTACAGTCAGCCT...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWNVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACACTCGTAGAGCTCATATaGATCAGGCTTCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTLVELI*IRLPWV
Trigger: GACCCACGGAAGCCTGATCCATATGAGCTCTACGAG...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCTCGTAGAGCTCATATaGATCAGGCTTCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPLVELI*IRLPWV
Trigger: GACCCACGGAAGCCTGATCCATATGAGCTCTACGAG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISNPFEN*SWVALV
Trigger: AACAAGTGCCACCCAGGACCAGTTTTCGAATGGATT...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRERGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGCGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGLRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRELRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATGGATGCCTTATTTGTGCCCACAGCCTGTGGCTTTCAGGCTATACAGTATGTTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: YGCLICAHSLWLSGYTVCCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...ACATACTGTATAGCCTGAAAGCCACAGGCTGTGGGCACAAATAAGGCATCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHLVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLLVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATTGGGGCTGTTGGGGGTaGCTGGGCTTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHWGCWG*LGLAGP
Trigger: TGGCCCAGCCAAGCCCAGCCACCCCCAACAGCCCCA...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGTCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQSLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGGGTTTTGCCGGCTACTGGAATCCCATCAACATACACAAGCTCATCTCCTGGAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: VGFAGYWNPINIHKLISWRLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...CCAGGAGATGAGCTTGTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETLVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATCCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVTEGTA*CRGSAA
Trigger: GGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGT...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGCCTGGGCTTATCTGGTaGGAAGGGTCGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQPGLIW*EGSEGG
Trigger: CCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGG...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAAGGCGCTGCTTCTTCTaGCCGCAGGCTGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKRRCFF*PQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCT...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGAGGCGCTGCTTCTTCTaGCCGCAGGCTGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKERRCFF*PQAESS
Trigger: GGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGCGCGGCTCATCTGCTaGCGGCCGAGGCGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQARLIC*RPRRRV
Trigger: AACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGCGGGCGGGTTGGCCGTaGCCGCGCGGCTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKRAGWP*PRGSSA
Trigger: AGCAGATGAGCCGCGCGGCCACGGCCAACCCGCCCG...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGCCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPREPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
3UTR CAA 72 bp GAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ESSFGFLTSCSR*ISQVGPGLIWW
Trigger: CCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CAA 72 bp TTCTACCACACTTGGCACTGTTCCTATTTCCATACTTaGCCCGGGACACTCAGGCCAGAACTTCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: FYHTWHCSYFHT*PGTLRPELQPS
Trigger: TGAGGGCTGAAGTTCTGGCCTGAGTGTCCCGGGCAAAGTATGGAAATAGGAACAGTGCCAAGTGTGGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAACCGGGTTCCTGCCAATaGCACTCTCATGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKPGSCQ*HSHGLC
Trigger: GCAAAGTCCATGAGAGTGTCATTGGCAGGAACCCGG...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGATCACGAATGATTTGCTaGAGCTCATGGTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRSRMIC*SSWSTE
Trigger: TTCTGTGGACCATGAGCTTCAGCAAATCATTCGTGA...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAAGAGGTTGTCACGAATaGTTTGCTGAAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWERGCHE*FAEAHG
Trigger: ACCATGAGCTTCAGCAAATCATTCGTGACAACCTCT...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR TCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGCTACTCCATTTCCATTaGCCACAGGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPRELLHFH*PQASLP
Trigger: AGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAG...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGCTACTCCATTTCCATTaGCCACAGGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLLLHFH*PQASLP
Trigger: AGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAG...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACTTCAGCTCCTCAGGCTaGCTGTACACTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHFSSSG*LYTGAG
Trigger: TCCTGCACCAGTGTACAGTCAGCCTGAGGAGCTGAA...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTGTGTTATGGTCAATaGAGTAGACTTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPLCYGQ*SRLRPS
Trigger: AGAAGGGCGAAGTCTACTTCATTGACCATAACACAA...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGATCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRSWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQSCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGTACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519748.5
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAATACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCTCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCTGTTGAGCTCCTCCTaGGGAATGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHLLSSS*GMMRRV
Trigger: CACCCTTCGCATCATTCCTCAGGAGGAGCTCAACAG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACTGTTGAGCTCCTCCTaGGGAATGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGLLSSS*GMMRRV
Trigger: CACCCTTCGCATCATTCCTCAGGAGGAGCTCAACAG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACTGTTGAGCTCCTCCTaGGGAATGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRELLSSS*GMMRRV
Trigger: CACCCTTCGCATCATTCCTCAGGAGGAGCTCAACAG...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTTGATTTCAATGATTTaGTCTCCTACCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDLISMI*SPTLIL
Trigger: GAGGATGAGGGTAGGAGATCAAATCATTGAAATCAA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAACGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKERRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGAGCTTATTTGCATTTaGACTCCTGTAAAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRELICI*TPVKSK
Trigger: CTTACTCTTTACAGGAGTTCAAATGCAAATAAGCTC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGATTACGTGTGACCTTTaGGATGGACCTGATCGCCCC +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGITCDL*DGPDRP
Trigger: GGGGCGATCAGGTCCATCTCAAAGGTCACACGTAAT...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCCGACACCAATTTGCTaGCGCTCTCATAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHPTPIC*RSHRPP
Trigger: AGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTGGTGCATGGCACCGTaGGGAGGTAGAGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTWCMAP*GGRGCH
Trigger: GTGACAACCTCTACCTCCGCACGGTGCCATGCACCA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGCTGACTGTACACTGGTaGAGGATAAGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKLTVHW*RIRLGG
Trigger: CCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCTGTTTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTGCCGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SCFGYTRAMLSVVSIMGCRKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...GCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAAACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTTGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: YLSGARSPRTLTDALKGPWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIARAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCCGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLRAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAAGCCAAATCCAGACTCCATCCTCCGAAGATGAACATCCAATTCCTTATAATCACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: EAKSRLHPPKMNIQFLIITVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...GATTATAAGGAATTGGATGTTCATCTTCGGAGGATGGAGTCTGGATTTGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAATTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGATCCGACAGAGGGTACTaGCTGGTGTCGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRSDRGY*LVSGEC
Trigger: GCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGA...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCCTCCCATTCCTTATTaGTGGTCCATCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPPPIPY*WSIFCQ
Trigger: CTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCTGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISCSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKAERSL*SPRRCF
Trigger: GAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGC...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGCCGAGCGCTCCCTCTaGTCCCCGAGGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYAERSL*SPRRCF
Trigger: GAAGCAGCGCCTCGGGGAGCAGAGGGAGCGCTCGGC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGGAACCTAAGAAGAACTaGCTGCGCCGGGGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVEPKKN*LRRGGR
Trigger: CCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAGGTTC...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTCATCCAAGTCCTTCATaGAGTGGGGAGGAATATTTT +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPHPSPS*SGEEYF
Trigger: AAAATATTCCTCCCCACTGCATGAAGGACTTGGATG...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCCCTTCAGAAACACTTTaGCTTTTAATATGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFPSETL*LLICVA
Trigger: AGCTACACATATTAAAAGGCAAAGTGTTTCTGAAGG...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR GCA 90 bp GATGCCTTATTTGTGCCCACAGCCTGTGGCTTTCAGGCTATACAGTATGTCCGTTGGATGCCTTATTTGTaGCCACAGCCTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: DALFVPTACGFQAIQYVRWMPYL*PQPVAF
Trigger: GAAAGCCACAGGCTGTGGGCACAAATAAGGCATCCA...ACGGACATACTGTATAGCCTGAAAGCCACAGGCTGTGGGCACAAATAAGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGATTTTGGACATGGCAGTaGGGCGAGTCGCCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGFWTWQ*GESPQF
Trigger: GAACTGAGGCGACTCGCCCCACTGCCATGTCCAAAA...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATTGGCCTTGTGGTGCATaGCACCGTGCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHWPCGA*HRAEVE
Trigger: CTCTACCTCCGCACGGTGCCATGCACCACAAGGCCA...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGCTTCAGCACTTGGAGTaGCTCCTGGAAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLLQHLE*LLEVSG
Trigger: ACCAGATACTTCCAGGAGCCACTCCAAGTGCTGAAG...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCATGTTCACTGGATTCTaGTGTTACTACTACTCCATT +
Preference number: 4 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRMFTGF*CYYYSI
Trigger: AATGGAGTAGTAGTAACACCAGAATCCAGTGAACAT...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGATGTTCACTGGATTCTaGTGTTACTACTACTCCATT +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMMFTGF*CYYYSI
Trigger: AATGGAGTAGTAGTAACACCAGAATCCAGTGAACAT...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTGTCTTCAGGTTTAGTTaGCTTTGTGTCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISVFRFS*LCVIHL
Trigger: CAGATGGATGACACAAAGCCAACTAAACCTGAAGAC...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGCTGCTCACAAATGCCTGGTGTTTGCTGTCCGTTTCCAAACAAGGAATCAACTTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VLLTNAWCLLSVSKQGINFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...GTTGATTCCTTGTTTGGAAACGGACAGCAAACACCAGGCATTTGTGAGCAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCAAATCCAAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: IKIGCPGSSPPRILKPNPNVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...TGGATTTGGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCAAATCCAGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: IKIGCPGSSPPRILKPNPDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...TGGATTTGGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCAAATCCATTCGAAAACTGGTCCTaGGTGGCACTTGTTGCCTAC +
Preference number: 4 (lower is better)
Translates to: IKIGCPGSSPPRILKPNPFENWS*VALVAY
Trigger: GTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAA...TGGATTTGGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGCACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCCACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: PDLMSSIALACVMSLVLSHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTCTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTLRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCAATGGGACAGTCCTTAAGTATATCCACTACTTCTGTATGGCTCAGGTTCTGCTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SNGTVLKYIHYFCMAQVLLRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...CAGAACCTGAGCCATACAGAAGTAGTGGATATACTTAAGGACTGTCCCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTAGTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACCTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSAPLFSCFHTQHFGPNHLVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...GTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTATGCGTCCGATTTTATaGGGCACAGTTATAGTGGAT +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPMRPIL*GTVIVD
Trigger: ATCCACTATAACTGTGCCCCATAAAATCGGACGCAT...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CTGTCGGCTGAGCCCATGGCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCATGTTGATGATAGACTaGCCATTCACTGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: LSAEPMAMTAPIKIGCPGMLMID*PFTARI
Trigger: GATCCTAGCAGTGAATGGCCAGTCTATCATCAACAT...GCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGCCATGGGCTCAGCCGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp GTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGTGGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VWFHILPCFHFRPVTIFVDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...CACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGCTGTTGGGGGTGGCTaGGCTTGGCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYAVGGG*AWLGQG
Trigger: CCCCTGGCCCAGCCAAGCCCAGCCACCCCCAACAGC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGTCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLSLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAATCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKSLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATCCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAATCCCAAGTTGGGCCTaGGCTTATCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREIPSWA*AYLVGR
Trigger: CCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGAT...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGTTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTG +
Preference number: 4 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWFDIPS*AWAYLV
Trigger: CACCAGATAAGCCCAGGCCCAACTTGGGATATCAAA...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGCCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAACACTTTTCATGCACATaGAGAGACTGGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEHFSCT*RDWKVP
Trigger: TGGTACCTTCCAGTCTCTCCATGTGCATGAAAAGTG...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CAA 72 bp GGAAGAAACATTCAGGGCTCAGAGCTTCTACCACACTaGGCACTGTTCCTATTTCCATACTTTGCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: GRNIQGSELLPH*ALFLFPYFARD
Trigger: GTCCCGGGCAAAGTATGGAAATAGGAACAGTGCCAAGTGTGGTAGAAGCTCTGAGCCCTGAATGTTTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CAA 72 bp CTCTTGAGCAGCAGCCTCACTCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTGGCATGTGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: LLSSSLTRLPPD*MSSIALACVMS
Trigger: GGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGGAGGAAGACGAGTGAGGCTGCTGCTCAAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTTGAAATCGTAAGTTaGGGTAGTGACGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISFEIVS*GSDEGL
Trigger: AAGACCTTCGTCACTACCTCAACTTACGATTTCAAA...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR TCA 90 bp CATGTGCCTGTAGTCCTACCTACTGGAGAAGCTGAGGTGAAGGATCACTTGAGCTTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: HVPVVLPTGEAEVKDHLSFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...GCTCAAGTGATCCTTCACCTCAGCTTCTCCAGTAGGTAGGACTACAGGCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAACAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGSCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CAGGCTGTTTTGAGTGCTTTGAATAGGCAACCACATGTTTGTCACACGTGTGTCAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QAVLSALNRQPHVCHTCVSCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...GACACACGTGTGACAAACATGTGGTTGCCTATTCAAAGCACTCAAAACAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKSCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACAAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp GTATGGATGCCTTATTTGTGCCCACAGCCTGTGGCTTTCAGGCTATACAGTATGTCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VWMPYLCPQPVAFRLYSMSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...CATACTGTATAGCCTGAAAGCCACAGGCTGTGGGCACAAATAAGGCATCCATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR TCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAATCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKESLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGTGGTATGGATGCCTTATTTGTGCCCACAGCCTGTGGCTTTCAGGCTATACAGTCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: SGMDALFVPTACGFQAIQSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...CTGTATAGCCTGAAAGCCACAGGCTGTGGGCACAAATAAGGCATCCATACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR TCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGTCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPRESFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CACTTCCGACCTGTAACTATTTTCGTGTCCTTGCAGCTGAAGTGGTTGAGGTGGTCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: HFRPVTIFVSLQLKWLRWSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...CCACCTCAACCACTTCAGCTGCAAGGACACGAAAATAGTTACAGGTCGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCTTCACGATGTCAGCGTaGGGCATGTTGATGATAGAC +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERFTMSA*GMLMID
Trigger: GTCTATCATCAACATGCCTCACGCTGACATCGTGAA...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTCGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTRRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAACTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKLLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATTTTAGGTCTGCGCGTTaGTGCGATGCCGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHFRSAR*CDAAQA
Trigger: TGCTTGGGCGGCATCGCATCAACGCGCAGACCTAAA...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCCACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFHVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTG...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTAGGTGGAGGTTGCAGTaGGCCAAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLRWRLQ*AKIVPL
Trigger: CAGTGGCACGATCTTGGCTCACTGCAACCTCCACCT...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTGGTGCATGGCACCGTaGGGAGGTAGAGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQWCMAP*GGRGCH
Trigger: GTGACAACCTCTACCTCCGCACGGTGCCATGCACCA...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGCTGACTGTACACTGGTaGAGGATAAGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKELTVHW*RIRLGG
Trigger: CCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAATTTTCCATCCTGTGCTaGAGGCCCATCCGGAATCAC +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEFSILC*RPIRNH
Trigger: GTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAA...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAATGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAATGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRRAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLNSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPRENSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCAAATCCAAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: IKIGCPGSSPPRILKPNPNSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...TGGATTTGGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVRLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TATGGATGCCTTATTTGTGCCCACAGCCTGTGGCTTTCAGGCTATACAGTATGTGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: YGCLICAHSLWLSGYTVCAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...ACATACTGTATAGCCTGAAAGCCACAGGCTGTGGGCACAAATAAGGCATCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATTGCGCCATGGGACTCTaGTTCTCTGAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHCAMGL*FSELGA
Trigger: GGCACCCAGCTCAGAGAAGCAGAGTCCCATGGCGCA...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGCGCCATGGGACTCTaGTTCTCTGAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVCAMGL*FSELGA
Trigger: GGCACCCAGCTCAGAGAAGCAGAGTCCCATGGCGCA...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGAAAGTGGTTGAGGTGGTaGTGGCTGGGCGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRKWLRW*WLGDGA
Trigger: AGCCCCATCGCCCAGCCAGCACCACCTCAACCACTT...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATATTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAATTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTTCCGACAGAGGGTACTaGCTGGTGTCGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCSDRGY*LVSGEC
Trigger: GCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGA...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAACCTCCCATTCCTTATTaGTGGTCCATCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQPPIPY*WSIFCQ
Trigger: CTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGG...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCATGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMACSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAGCTCCCAGGCCTTGGTaGCTCGTGGATCTATGCGTG +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALAPRPW*LVDLCV
Trigger: CACGCATAGATCCACGAGGCACCAAGGCCTGGGAGC...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTCATCCAAGTCCTTCATaGAGTGGGGAGGAATATTTT +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFHPSPS*SGEEYF
Trigger: AAAATATTCCTCCCCACTGCATGAAGGACTTGGATG...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTGTCTCAGTTTCAGCTTaGTCCGTGCAGTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFVSVSA*SVQFDF
Trigger: AAAATCAAACTGCACGGAGCAAGCTGAAACTGAGAC...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGATCTATGAGCTAAACTaGAAAATTCTGACTTATGGC +
Preference number: 4 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMIYELN*KILTYG
Trigger: GCCATAAGTCAGAATTTTGCAGTTTAGCTCATAGAT...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCCCTTCAGAAACACTTTaGCTTTTAATATGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAPSETL*LLICVA
Trigger: AGCTACACATATTAAAAGGCAAAGTGTTTCTGAAGG...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCCCCTCTCTCGCTTATaGTCTCTCCCTCCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAPLSRL*SLPPFP
Trigger: GGGAAACGGAGGGAGAGAGCATAAGCGAGAGAGGGG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR GCA 90 bp CATGTGCCTGTAGTCCTACCTACTGGAGAAGCTGAGGTGAAGGATCACTTGAGCCTGTACTGTAGCTTATaGAACAGAGTGAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: HVPVVLPTGEAEVKDHLSLYCSL*NRVRPC
Trigger: ACAGGGTCTCACTCTGTTGCATAAGCTACAGTACAG...GCTCAAGTGATCCTTCACCTCAGCTTCTCCAGTAGGTAGGACTACAGGCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTGATGAGAGGGACGGCTaGGCAGAGGTAGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIADERDG*AEVGEL
Trigger: AAGCTCTCCTACCTCTGCCCAGCCGTCCCTCTCATC...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000419488.5
CDS-3UTR CCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGGCTTTCCCTCTTCTTTaGATGGAGTGTGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGAFPLL*MECGRG
Trigger: TCCTCGTCCACACTCCATCCAAAGAAGAGGGAAAGC...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000419488.5
CDS-3UTR CCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGATGGCCTTGTGGTGCATaGCACCGTGCGGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRWPCGA*HRAEVE
Trigger: CTCTACCTCCGCACGGTGCCATGCACCACAAGGCCA...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACTGGTGCTGGTTCTGCTaGCGGCTTTGGGGTACCGTA +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNWCWFC*RLWGTV
Trigger: TACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCA...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTATGGTGCTGGTTCTGCTaGCGGCTTTGGGGTACCGTA +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVWCWFC*RLWGTV
Trigger: TACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCA...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCTGGTGCTGGTTCTGCTaGCGGCTTTGGGGTACCGTA +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLWCWFC*RLWGTV
Trigger: TACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCA...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGAGGCTGACTGTACACTaGTGCAGGATAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKRLTVH*CRIRLG
Trigger: TCCCAGCCTTATCCTGCACCAGTGTACAGTCAGCCT...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGATCAGGCAATGGGTCTaGTTCCTCATTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPREIRQWV*FLIVFR
Trigger: CCTGAAGACAATGAGGAACCAGACCCATTGCCTGAT...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCCAGAACTTCAGCCCTCACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ARTSALTLFCNFLPRSWEVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...CTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGTGAGGGCTGAAGTTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGATTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAATTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTCATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: YLSGARSPRTLTDALKGPHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPRESIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATCCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACCCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIARGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTACTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVLRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGCAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAACAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCCAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: PDLMSSIALACVMSLVLSQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ACTTGTCCGGTATCTGTATCACTGGAACAAATCAAAACAAGACCCCTTATTCAACTGGTCTGCAGGCTGTaGGAGGCGAAGCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TCPVSVSLEQIKTRPLIQLVCRL*EAKPSG
Trigger: CCCTGAAGGCTTCGCCTCCCACAGCCTGCAGACCAG...TTGAATAAGGGGTCTTGTTTTGATTTGTTCCAGTGATACAGATACCGGACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAATGTTGATGATAGACTaGCCATTCACTGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLMLMID*PFTARI
Trigger: GATCCTAGCAGTGAATGGCCAGTCTATCATCAACAT...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIADSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQRLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: PDLMSSIALACVMSLVLSPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAACAGAGGGTACTGCCTaGTGTCGGGGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINITEGTA*CRGSAA
Trigger: GGCAGCACTCCCCCGACACCAGGCAGTACCCTCTGT...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAATACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQYFRQT*GGGSGR
Trigger: TCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTA...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCTGGGCTTATCTGGTaGGAAGGGTCGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISPGLIW*EGSEGG
Trigger: CCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATGCACATGGAGAGACTaGAAGGTACCATTCCATATT +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLCTWRD*KVPFHI
Trigger: AATATGGAATGGTACCTTCCAGTCTCTCCATGTGCA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATATGCACATGGAGAGACTaGAAGGTACCATTCCATATT +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKICTWRD*KVPFHI
Trigger: AATATGGAATGGTACCTTCCAGTCTCTCCATGTGCA...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
3UTR CAA 72 bp ACTTCTGTATGGCTCAGGTTCTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCGCCTTCACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: TSVWLRFCTFCW*ISTMRSPSHRP
Trigger: TGGCCTGTGTGAAGGCGACCTCATTGTTGAGATCAACCAGCAGAATGTACAGAACCTGAGCCATACAGAAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAGGTCCTTGCAGTGTTTaGTCACGGCCAGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQGPCSV*SRPARP
Trigger: GGGACGTGCTGGCCGTGATCAAACACTGCAAGGACC...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAATTTGAAATCGTAAGTTaGGGTAGTGACGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEFEIVS*GSDEGL
Trigger: AAGACCTTCGTCACTACCTCAACTTACGATTTCAAA...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR TCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCTACTCCATTTCCATTaGCCACAGGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHLLHFH*PQASLP
Trigger: AGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCTACTCCATTTCCATTaGCCACAGGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETLLHFH*PQASLP
Trigger: AGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGCTACTCCATTTCCATTaGCCACAGGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKLLHFH*PQASLP
Trigger: AGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAG...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTATTCAGCTCCTCAGGCTaGCTGTACACTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVFSSSG*LYTGAG
Trigger: TCCTGCACCAGTGTACAGTCAGCCTGAGGAGCTGAA...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTTTCAGCTCCTCAGGCTaGCTGTACACTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAFSSSG*LYTGAG
Trigger: TCCTGCACCAGTGTACAGTCAGCCTGAGGAGCTGAA...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCTTCAGCTCCTCAGGCTaGCTGTACACTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFFSSSG*LYTGAG
Trigger: TCCTGCACCAGTGTACAGTCAGCCTGAGGAGCTGAA...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGTTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACTACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTTGGGTGGCCCCAGATaGAGCCATAGACACATTGTC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTLGGPR*SHRHIV
Trigger: GACAATGTGTCTATGGCTTCATCTGGGGCCACCCAA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGTTGGGTGGCCCCAGATaGAGCCATAGACACATTGTC +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKELGGPR*SHRHIV
Trigger: GACAATGTGTCTATGGCTTCATCTGGGGCCACCCAA...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCCTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFLPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp CTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACAGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: LLYFRVSIPNILGQITSTAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...TGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR TCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAAAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: CSFIFVFPYPTFWAKSLQSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...TTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAACAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAATTCACGATGTCAGCGTaGGGCATGTTGATGATAGAC +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQFTMSA*GMLMID
Trigger: GTCTATCATCAACATGCCTCACGCTGACATCGTGAA...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGTTCACGATGTCAGCGTaGGGCATGTTGATGATAGAC +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQFTMSA*GMLMID
Trigger: GTCTATCATCAACATGCCTCACGCTGACATCGTGAA...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCTGTTGAGCTCCTCCTaGGGAATGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIALLSSS*GMMRRV
Trigger: CACCCTTCGCATCATTCCTCAGGAGGAGCTCAACAG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACCTGTTGAGCTCCTCCTaGGGAATGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNLLSSS*GMMRRV
Trigger: CACCCTTCGCATCATTCCTCAGGAGGAGCTCAACAG...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTACGTCGTGTTCCCGTTTaGTATCCCAAGTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVRRVPV*YPKLGL
Trigger: CAGGCCCAACTTGGGATATCAAACGGGAACACGACG...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCTTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVLLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATTACGTGTGACCTTTaGGATGGACCTGATCGCCCC +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKITCDL*DGPDRP
Trigger: GGGGCGATCAGGTCCATCTCAAAGGTCACACGTAAT...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTTTGTCCTGTTCCTTCTaGCCCACCCATGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVLSCSF*PTHAEA
Trigger: AGCTTCAGCATGGGTGGGTCAGAAGGAACAGGACAA...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATCCGACACCAATTTGCTaGCGCTCTCATAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHPTPIC*RSHRPP
Trigger: AGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGG...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCCTCCGACACCAATTTaGTGCCGCTCTCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAPPTPI*CRSHRP
Trigger: TGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGTCAACAATTCCTCCTTaGTTGACACACTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQSTIPP*LTHLSR
Trigger: CCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGA...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCTGACTGTACACTGGTaGAGGATAAGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNLTVHW*RIRLGG
Trigger: CCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCCTGACTGTACACTGGTaGAGGATAAGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFLTVHW*RIRLGG
Trigger: CCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTACGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALRKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPREITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAACATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATACGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIRAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519748.5
CDS-3UTR GCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIRAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIRFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: SSNQNRLSRLISPEDSEARFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...GGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp TTAGTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LVLLYFRVSIPNILGQITTVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...AGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR GCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVTVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: YLSGARSPRTLTDALKGPGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATGCGCCATGGGACTCTaGTTCTCTGAGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAICAMGL*FSELGA
Trigger: GGCACCCAGCTCAGAGAAGCAGAGTCCCATGGCGCA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGTCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPRESGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTSGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGTCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: FPNVVFPFDIPSWAWAYLSGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...CAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTTTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFFDEFY*SGMCHV
Trigger: GACATGACACATGCCAGAGCAATAGAACTCATCAAA...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTGCTCCCCGAGGCGCTaGTTCTTCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLCSPRR*FFWPQA
Trigger: AGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACCTAAGAAGAACTGCCTaGGCCGGGGCGGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYLRRTA*AGAGGL
Trigger: CAACCCGCCCGCCCCGGCGCAGGCAGTTCTTCTTAG...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATAGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTATTGCTTTTACAAGCTaGAAGATCCTTCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFIAFTS*KILHLR
Trigger: CCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAAT...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGTACAGTACCAGGACGTaGAGCTACACTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQYSTRT*SYTTEA
Trigger: TGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTA...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGAGTAGCTGTGAACTGTaGAAACTAGAGTTTATGCCA +
Preference number: 4 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLSSCEL*KLEFMP
Trigger: TGGCATAAACTCTAGTTTGCACAGTTCACAGCTACT...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGCTTGTCACTTTTCATaGACATGGAGAGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPACHFS*TWRDWK
Trigger: CTTCCAGTCTCTCCATGTGCATGAAAAGTGACAAGC...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGATCTTTGGATGGAGTGTaGACGAGGAATGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGSLDGV*TRNGED
Trigger: ATCCTCCCCATTCCTCGTCCACACTCCATCCAAAGA...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000419488.5
CDS-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACTTCTGCTGGCGGCTTTaGGGTACCGTAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHFCWRL*GTVVIV
Trigger: GACAATTACTACGGTACCCCAAAGCCGCCAGCAGAA...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGATTCTGCTGGCGGCTTTaGGGTACCGTAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGFCWRL*GTVVIV
Trigger: GACAATTACTACGGTACCCCAAAGCCGCCAGCAGAA...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGATGGTGCTGGTTCTGCTaGCGGCTTTGGGGTACCGTA +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRWCWFC*RLWGTV
Trigger: TACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCA...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTTGGTGCTGGTTCTGCTaGCGGCTTTGGGGTACCGTA +
Preference number: 4 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCWCWFC*RLWGTV
Trigger: TACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCA...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp GGTCCTGGGTGGCACTTGTTGCCTACTTTCATAAATGGCCCTAGATTTCTCGTAACTTGGAGTGGCTCCTaGAAGTATCTGGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: GPGWHLLPTFINGPRFLVTWSGS*KYLVCY
Trigger: GTAACAGACCAGATACTTCCAGGAGCCACTCCAAGT...TACGAGAAATCTAGGGCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCTTCAGCACTTGGAGTaGCTCCTGGAAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETLQHLE*LLEVSG
Trigger: ACCAGATACTTCCAGGAGCCACTCCAAGTGCTGAAG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTGTCTTCATGTTCACTaGATTCTGGTGTTACTACTA +
Preference number: 4 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPCLHVH*ILVLLL
Trigger: TAGTAGTAACACCAGAATCCAGTGAACATGAAGACA...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTGTCTTCATGTTCACTaGATTCTGGTGTTACTACTA +
Preference number: 4 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISCLHVH*ILVLLL
Trigger: TAGTAGTAACACCAGAATCCAGTGAACATGAAGACA...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGAGGCTGACTGTACACTaGTGCAGGATAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKERLTVH*CRIRLG
Trigger: TCCCAGCCTTATCCTGCACCAGTGTACAGTCAGCCT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTCCAGTTATCAGGCAATaGGTCTGGTTCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: YLSGARSPRTLTDALKGPPVIRQ*VWFLIV
Trigger: GACAATGAGGAACCAGACCCATTGCCTGATAACTGG...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACAGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAATTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKENVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGCATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: YLSGARSPRTLTDALKGPSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTCTCGTAGAGCTCATATaGATCAGGCTTCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTLVELI*IRLPWV
Trigger: GACCCACGGAAGCCTGATCCATATGAGCTCTACGAG...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCAATGGGACAGTCCTTAAGTATATCCACTACTTCTGTATGGCTCAGGTTCTGCTCGTAGAGCTCATATaGATCAGGCTTCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SNGTVLKYIHYFCMAQVLLVELI*IRLPWV
Trigger: GACCCACGGAAGCCTGATCCATATGAGCTCTACGAG...CAGAACCTGAGCCATACAGAAGTAGTGGATATACTTAAGGACTGTCCCATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAAAAACTGGTCCTGGGTaGCACTTGTTGCCTACTTTC +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEKTGPG*HLLPTF
Trigger: GAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTT...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000628980.2
CDS-3UTR CCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACCACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTACACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCACCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: VLLYFRVSIPNILGQITSPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...TGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GAAGCCAAATCCAGACTCCATCCTCCGAAGATGAACATCCAATTCCTTATAATCGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EAKSRLHPPKMNIQFLIIGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...GATTATAAGGAATTGGATGTTCATCTTCGGAGGATGGAGTCTGGATTTGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp CTTAGTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACCGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSAPLFSCFHTQHFGPNHRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...GTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTACGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACCTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: APLFSCFHTQHFGPNHFNLRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...GTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp CCGGTATCTGTATCACTGGAACAAATCAAAACAAGACCCCTTATTCAAATGCAGCTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PVSVSLEQIKTRPLIQMQLRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...CTGCATTTGAATAAGGGGTCTTGTTTTGATTTGTTCCAGTGATACAGATACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGCAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGGACTCTGCTGCGCCATaGGACTCTGCTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVDSAAP*DSASLS
Trigger: GCTCAGAGAAGCAGAGTCCCATGGCGCAGCAGAGTC...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTTCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIASLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAACCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGATGAACATCCAATTCCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTCCTGTAGTCCAAGGGTaGGGGCTGCTGGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: KMNIQFLIIWTRGIHSKTPVVQG*GLLVVP
Trigger: GGGGACTACCAGCAGCCCCCACCCTTGGACTACAGG...AGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGGAATTGGATGTTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAACCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGGGGTTCGTCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLGFVIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGACGAACCC...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCACCTGGGCTTATCTGGTaGGAAGGGTCGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAPGLIW*EGSEGG
Trigger: CCCACCCTCCGACCCTTCCCACCAGATAAGCCCAGG...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEAKGEP*KHVMGE
Trigger: TTCACCCATGACATGTTTCCATGGCTCACCCTTGGC...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AACTGTCTGCTAGTCAGTGGTATGGATGCCTTATTTGTGCCCACAGCCTGTGGCCTGTCTGCTAGTCAGTaGTATGGATGCCTTATTTGT +
Preference number: 4 (lower is better)
Translates to: NCLLVSGMDALFVPTACGLSASQ*YGCLIC
Trigger: ACAAATAAGGCATCCATACCACTGACTAGCAGACAG...GCCACAGGCTGTGGGCACAAATAAGGCATCCATACCACTGACTAGCAGACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCCTTATGTGGCCTTGTaGTGCCTAGAGCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETPYVAL*CLELCS
Trigger: TGAACAGAGCTCTAGGCACCACAAGGCCACATAAGG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGATGCTCCCAGGCCTTaGTGCCTCGTGGATTTCCGG +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISDAPRP*CLVDFR
Trigger: CCGGAAATCCACGAGGCACCAAGGCCTGGGAGCATC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS-3UTR TCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACCGGGTTCCTGCCAATaGCACTCTCATGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRPGSCQ*HSHGLC
Trigger: GCAAAGTCCATGAGAGTGTCATTGGCAGGAACCCGG...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPLHVAH*FIPLPF
Trigger: AAACGGAAGAGGAATAAATCAGTGAGCAACATGGAG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGTGACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: VWFHILPCFHFRPVTIFVTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...CACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLSCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGATACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATCTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHLPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRLPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGCCATCTCTGTCGGCTaGGCCCATGGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAAISVG*AHGNDS
Trigger: GCTGTCATTGCCATGGGCTCAGCCGACAGAGATGGC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAATCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGTGCAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 4 (lower is better)
Translates to: VWFHILPCFHFRPVTIFVQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...CACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAATTCACGATGTCAGCGTaGGGCATGTTGATGATAGAC +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREFTMSA*GMLMID
Trigger: GTCTATCATCAACATGCCTCACGCTGACATCGTGAA...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATCTCCATGTCCACAGTaGAATAATCAAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTSPCPQ*NNQNPG
Trigger: CCCAGGATTTTGATTATTTCACTGTGGACATGGAGA...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGTCTCCATGTCCACAGTaGAATAATCAAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPSPCPQ*NNQNPG
Trigger: CCCAGGATTTTGATTATTTCACTGTGGACATGGAGA...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAACATGTCATGGGTaGACGGTTCCGAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKETCHG*TVPNVS
Trigger: TGACACATTCGGAACCGTTCACCCATGACATGTTTC...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAACCTTTGAGATGGACCTaGTCGCCCCTTTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEPLRWT*SPLLLF
Trigger: AAAAAGTAAAAGGGGCGATCAGGTCCATCTCAAAGG...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGCCTTTGAGATGGACCTaGTCGCCCCTTTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGPLRWT*SPLLLF
Trigger: AAAAAGTAAAAGGGGCGATCAGGTCCATCTCAAAGG...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACATTACGTGTGACCTTTaGGATGGACCTGATCGCCCC +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNITCDL*DGPDRP
Trigger: GGGGCGATCAGGTCCATCTCAAAGGTCACACGTAAT...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTATTACGTGTGACCTTTaGGATGGACCTGATCGCCCC +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAITCDL*DGPDRP
Trigger: GGGGCGATCAGGTCCATCTCAAAGGTCACACGTAAT...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CAGGCTGTTTTGAGTGCTTTGAATAGGCAACCACATGTTTGTCACACGTGTGTCAACCAGGGCTTAGCCTaGTCCTTTTCCTTTACACTC +
Preference number: 4 (lower is better)
Translates to: QAVLSALNRQPHVCHTCVNQGLA*SFSFTL
Trigger: GAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTT...GACACACGTGTGACAAACATGTGGTTGCCTATTCAAAGCACTCAAAACAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTTCTGGGAGAAAGGACTaGAAGTCTGGGATAGGACAG +
Preference number: 4 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVSGRKD*KSGIGQ
Trigger: CTGTCCTATCCCAGACTTTCAGTCCTTTCTCCCAGA...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTCAACAATTCCTCCTTaGTTGACACACTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETSTIPP*LTHLSR
Trigger: CCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR GCA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTGGTCAACATAATAAGTaGCATAAATGGGATCATCGA +
Preference number: 4 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFGQHNK*HKWDHR
Trigger: TCGATGATCCCATTTATGGCACTTATTATGTTGACC...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATCGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHRKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCGGAAACCTGGGGCCTaGAGGGGCTTTGTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISRKPGA*RGFVPS
Trigger: ACTTGGAACAAAGCCCCTGCAGGCCCCAGGTTTCCG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACTTTTCCATCCTGTGCTaGAGGCCCATCCGGAATCAC +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNFSILC*RPIRNH
Trigger: GTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAA...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCACGGGCGGTGGATACGTaGCGTCTAGCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMARAVDT*RLADHQ
Trigger: CTGATGGTCAGCTAGACGGCACGTATCCACCGCCCG...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLNSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCCATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHRLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACATGAAACAGGGGGAGAGGCATTaGTACTGGGGGCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LFSCFHTQHFGPNHFNMKQGERH*YWGQRG
Trigger: ACCACGCTGCCCCCAGTAGCAATGCCTCTCCCCCTG...TTTCATGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR GCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAATTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAATCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKESGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACTCCGACAGAGGGTACTaGCTGGTGTCGGGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYSDRGY*LVSGEC
Trigger: GCACTCCCCCGACACCAGGCAGTACCCTCTGTCGGA...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAACCTCCCATTCCTTATTaGTGGTCCATCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKPPIPY*WSIFCQ
Trigger: CTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGG...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGCCTCCCATTCCTTATTaGTGGTCCATCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEPPIPY*WSIFCQ
Trigger: CTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGG...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGTTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWFDEFY*SGMCHV
Trigger: GACATGACACATGCCAGAGCAATAGAACTCATCAAA...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAGTSRR*SQALVP
Trigger: AGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACTGCGCGTTGATGCGATaGCGCCCAAGCACACCGGAC +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYCALMR*RPSTPD
Trigger: GTCCGGTGTGCTTGGGCGGCATCGCATCAACGCGCA...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAACCAATGACACTCTCATaGACTTTGCTAGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKPMTLS*TLLVQW
Trigger: CCACTGGACTAGCAAAGTCCATGAGAGTGTCATTGG...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCTTATGTGGCCTTGTaGTGCATGGCACCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISPYVAL*CMAPCG
Trigger: TCCGCACGGTGCCATGCACCACAAGGCCACATAAGG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAACTTGGAGTGGCTCCTaGAAGTATCTGGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKETWSGS*KYLVCY
Trigger: GTAACAGACCAGATACTTCCAGGAGCCACTCCAAGT...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGCAGGAGGCTCTATACTaGCTTTCTCCATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKQEALY*LSPCCS
Trigger: TGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTG...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAATGTTCACTGGATTCTaGTGTTACTACTACTCCATT +
Preference number: 4 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIMFTGF*CYYYSI
Trigger: AATGGAGTAGTAGTAACACCAGAATCCAGTGAACAT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGAGGCTGACTGTACACTaGTGCAGGATAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQRLTVH*CRIRLG
Trigger: TCCCAGCCTTATCCTGCACCAGTGTACAGTCAGCCT...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATAGGCTGACTGTACACTaGTGCAGGATAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHRLTVH*CRIRLG
Trigger: TCCCAGCCTTATCCTGCACCAGTGTACAGTCAGCCT...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGTCTTCAGGTTTAGTTaGCTTTGTGTCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERVFRFS*LCVIHL
Trigger: CAGATGGATGACACAAAGCCAACTAAACCTGAAGAC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAATCAGGCAATGGGTCTaGTTCCTCATTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEIRQWV*FLIVFR
Trigger: CCTGAAGACAATGAGGAACCAGACCCATTGCCTGAT...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKENVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTACCAATAGGAACAGACTaGAAAAGTTTGACAACATCT +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLPIGTD*KSLTTS
Trigger: AGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGG...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGCCTGTGAAGGGCAGGTaGGAAGGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKPVKGR*EGQVLR
Trigger: CCGCAGAACCTGCCCTTCCCACCTGCCCTTCACAGG...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCCTCGTAGAGCTCATATaGATCAGGCTTCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLLVELI*IRLPWV
Trigger: GACCCACGGAAGCCTGATCCATATGAGCTCTACGAG...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGAAAACTGGTCCTGGGTaGCACTTGTTGCCTACTTTC +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETKTGPG*HLLPTF
Trigger: GAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTT...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTAGTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSAPLFSCFHTQHFGPNHGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...GTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp CTTAGTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: LSAPLFSCFHTQHFGPNHESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...GTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTCTGCGTGGAGAGCTGTaGTGGGTGGATACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCLRGEL*WVDTEP
Trigger: AGGCTCTGTATCCACCCACCACAGCTCTCCACGCAG...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALSLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATACTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINILVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTCTGGTAGTCCCCTCCTaGGGGTTGCCTGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCLVVPS*GLPVIQ
Trigger: CTGGATTACAGGCAACCCCCAGGAGGGGACTACCAG...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGGGCCTGGGCTTATCTaGTGGGAAGGGTCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYGPGLI*WEGSEG
Trigger: ACCCTCCGACCCTTCCCACCAGATAAGCCCAGGCCC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACTTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTG +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHFDIPS*AWAYLV
Trigger: CACCAGATAAGCCCAGGCCCAACTTGGGATATCAAA...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGAGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAGGCCTTGGTGCCTCGTaGATCTATGCGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALGLGAS*IYACDS
Trigger: ACTGTCACACGCATAGATCCACGAGGCACCAAGGCC...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AGCTGTTTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTGCAAACGTACCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SCFGYTRAMLSVVSIMGCKRTIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGGTACGTTT...GCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAAACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCTCTATAATGGGCTGCTaGGAAACAACAACTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SSNQNRLSRLISPEDSEASIMGC*ETTTLK
Trigger: CTTTAAAGTTGTTGTTTCCCAGCAGCCCATTATAGA...GGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTCTGCTCACAAATGCCTaGTGTTTGCTGTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVLLTNA*CLLSVS
Trigger: GGAAACGGACAGCAAACACCAGGCATTTGTGAGCAG...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp GTGCTGCTCACAAATGCCTGGTGTTTGCTGTCCGTTTCCAAACAAGGAATCAACATATTAGTGGTTACCTaGGGTTTGGGAGAATTCGGG +
Preference number: 4 (lower is better)
Translates to: VLLTNAWCLLSVSKQGINILVVT*GLGEFG
Trigger: CCCGAATTCTCCCAAACCCCAGGTAACCACTAATAT...GTTGATTCCTTGTTTGGAAACGGACAGCAAACACCAGGCATTTGTGAGCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp GCCAGAACTTCAGCCCTCACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGAATGGACAGGAAAATaGAGTGTATCTGTACAATGG +
Preference number: 4 (lower is better)
Translates to: ARTSALTLFCNFLPRSWEEWTGK*SVSVQW
Trigger: CCATTGTACAGATACACTCCATTTTCCTGTCCATTC...CTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGTGAGGGCTGAAGTTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CAA 72 bp ATGGAGGCTGTCGGATGTCTGGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGTAACTATTTTCGTGTC +
Preference number: 4 (lower is better)
Translates to: MEAVGCLVSHLA*LSLPTCNYFRV
Trigger: GACACGAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATCCGACAGCCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGGTCCTTGCAGTGTTTaGTCACGGCCAGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQGPCSV*SRPARP
Trigger: GGGACGTGCTGGCCGTGATCAAACACTGCAAGGACC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTCACGAATGATTTGCTaGAGCTCATGGTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETSRMIC*SSWSTE
Trigger: TTCTGTGGACCATGAGCTTCAGCAAATCATTCGTGA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR TCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGCTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGLHVAH*FIPLPF
Trigger: AAACGGAAGAGGAATAAATCAGTGAGCAACATGGAG...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCTACTCCATTTCCATTaGCCACAGGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNLLHFH*PQASLP
Trigger: AGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATCTACTCCATTTCCATTaGCCACAGGCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHLLHFH*PQASLP
Trigger: AGGAAGAGAGGCCTGTGGTCAATGGAAATGGAGTAG...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTC +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYGGHLP*GTCTFV
Trigger: GACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCTTCAGCTCCTCAGGCTaGCTGTACACTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSFSSSG*LYTGAG
Trigger: TCCTGCACCAGTGTACAGTCAGCCTGAGGAGCTGAA...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTTCAGCTCCTCAGGCTaGCTGTACACTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVFSSSG*LYTGAG
Trigger: TCCTGCACCAGTGTACAGTCAGCCTGAGGAGCTGAA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATAGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGGGATGCATCCCGGGTaGAGAGTGGTTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCGMHPG*RVVFLG
Trigger: TCCGAGAAAAACCACTCTTCACCCGGGATGCATCCC...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAATTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVSCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTTTGGGTGGCCCCAGATaGAGCCATAGACACATTGTC +
Preference number: 4 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCLGGPR*SHRHIV
Trigger: GACAATGTGTCTATGGCTTCATCTGGGGCCACCCAA...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519748.5
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQLPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCTCATCTCCTGGGTaGAGGCGGCCATCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYSSSPG*RRPSLS
Trigger: CGACAGAGATGGCCGCCTTCACCCAGGAGATGAGCT...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATTCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTTCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIASLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACTCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCTGTTGAGCTCCTCCTaGGGAATGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISLLSSS*GMMRRV
Trigger: CACCCTTCGCATCATTCCTCAGGAGGAGCTCAACAG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTGATTTCAATGATTTaGTCTCCTACCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LSGARSPRTLTDALKGPTLISMI*SPTLIL
Trigger: GAGGATGAGGGTAGGAGATCAAATCATTGAAATCAA...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGGGTGGGGCTGGATGTaGTGGAGAGAATGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQGWGWM*WREWSE
Trigger: CTCGCTCCATTCTCTCCATCACATCCAGCCCCACCC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCGATATTCCAGTTTGTaGTTGCTCTTAACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPRYSSL*LLLTLS
Trigger: GGACAAAGTTAAGAGCAATCACAAACTGGAATATCG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACGATGGATGCCAAGGGTaGGCCATGGAAACATGTCAT +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNDGCQG*AMETCH
Trigger: ATGACATGTTTCCATGGCTCACCCTTGGCATCCATC...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAAGAATATGGAAAGGATaGAGCCTCATTCATTCGGGC +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKERIWKG*SLIHSG
Trigger: GCCCGAATGAATGAGGCTTCATCCTTTCCATATTCT...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAGAATATGGAAAGGATaGAGCCTCATTCATTCGGGC +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHRIWKG*SLIHSG
Trigger: GCCCGAATGAATGAGGCTTCATCCTTTCCATATTCT...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGCAAGATCCTTCACTTaGGGCTTTCAGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKARSFT*GFQPYS
Trigger: AGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGCAAGATCCTTCACTTaGGGCTTTCAGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHARSFT*GFQPYS
Trigger: AGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGGAATGGGATTTAGATaGTGTGCTGTCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHGMGFR*CAVFTG
Trigger: ACCTGTGAAGACAGCACATCATCTAAATCCCATTCC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGGAATGGGATTTAGATaGTGTGCTGTCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETGMGFR*CAVFTG
Trigger: ACCTGTGAAGACAGCACATCATCTAAATCCCATTCC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CAGGCTGTTTTGAGTGCTTTGAATAGGCAACCACATGTTTGTCACACGTGTGTCGTAGCAGAAGTGTCCTaGACAGCATCATTCCAAACT +
Preference number: 4 (lower is better)
Translates to: QAVLSALNRQPHVCHTCVVAEVS*TASFQT
Trigger: AGTTTGGAATGATGCTGTTCAGGACACTTCTGCTAC...GACACACGTGTGACAAACATGTGGTTGCCTATTCAAAGCACTCAAAACAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTCTGACCCACCCATGCTaGAGCTTCGATGTTTACACT +
Preference number: 4 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLLTHPC*SFDVYT
Trigger: AGTGTAAACATCGAAGCTTCAGCATGGGTGGGTCAG...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp CAGGCTGTTTTGAGTGCTTTGAATAGGCAACCACATGTTTGTCACACGTGTGTCTGTGTCCTTCATGCATaGGTTCCTCATTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QAVLSALNRQPHVCHTCVCVLHA*VPHCPV
Trigger: AACAGGACAATGAGGAACTCATGCATGAAGGACACA...GACACACGTGTGACAAACATGTGGTTGCCTATTCAAAGCACTCAAAACAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGTCTCATAGGCCACCTTaGCGGGCTTCACCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKSHRPP*RASPPP
Trigger: TGGGGGAGGTGAAGCCCGGCAAGGTGGCCTATGAGA...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCCGACACCAATTTGCTaGCGCTCTCATAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSPTPIC*RSHRPP
Trigger: AGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGG...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACCTCCGACACCAATTTaGTGCCGCTCTCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQPPTPI*CRSHRP
Trigger: TGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCTGACTGTACACTGGTaGAGGATAAGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSLTVHW*RIRLGG
Trigger: CCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTTTTCCATCCTGTGCTaGAGGCCCATCCGGAATCAC +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVFSILC*RPIRNH
Trigger: GTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAA...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACCATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATCATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACACAGTGAGGTTGACCTaGCCATTGCGGGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYTVRLT*PLRAAW
Trigger: CCACGCAGCCCGCAATGGGCAGGTCAACCTCACTGT...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMARLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VLLYFRVSIPNILGQITSAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...TGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAATTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAATTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCTTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERFDEFY*SGMCHV
Trigger: GACATGACACATGCCAGAGCAATAGAACTCATCAAA...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGTTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCG +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQFQLAP*SLIFKA
Trigger: CGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAA...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGGTCTCAGTTTCAGCTTaGTCCGTGCAGTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGVSVSA*SVQFDF
Trigger: AAAATCAAACTGCACGGAGCAAGCTGAAACTGAGAC...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AATCATAAAAGGTGCTTCTTTCTTTCAGCTTTGACAGCCTTCACTTGCATTTCAGGAGAAGGGGCCCTGTaGTTTACCCCATTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NHKRCFFLSALTAFTCISGEGAL*FTPFPS
Trigger: GGAAGGGAATGGGGTAAAGCACAGGGCCCCTTCTCC...TGAAATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAAGCACCTTTTATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTGCTTTCCCTCTTCTTTaGATGGAGTGTGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAAFPLL*MECGRG
Trigger: TCCTCGTCCACACTCCATCCAAAGAAGAGGGAAAGC...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000419488.5
CDS-3UTR CCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTCAAGCTTTTGGACATaGCAGTGGGGCGAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVSSFWT*QWGESP
Trigger: AGGCGACTCGCCCCACTGCCATGTCCAAAAGCTTGA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCTCAAGCTTTTGGACATaGCAGTGGGGCGAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSSSFWT*QWGESP
Trigger: AGGCGACTCGCCCCACTGCCATGTCCAAAAGCTTGA...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTACTTGGAGTGGCTCCTaGAAGTATCTGGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTTWSGS*KYLVCY
Trigger: GTAACAGACCAGATACTTCCAGGAGCCACTCCAAGT...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAATTTTCCTTCAGCACTTaGAGTGGCTCCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREFSFST*SGSWKY
Trigger: ATACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAA...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACTTTTCCTTCAGCACTTaGAGTGGCTCCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHFSFST*SGSWKY
Trigger: ATACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAA...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGCCAGTTATCAGGCAATaGGTCTGGTTCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEPVIRQ*VWFLIV
Trigger: GACAATGAGGAACCAGACCCATTGCCTGATAACTGG...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCTTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATTTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLNVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519748.5
CDS-3UTR CCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGAGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGCAGGTTCTGCGGTATaGCCGGAGCAGATAAACTCG +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISAGSAV*PEQINS
Trigger: CGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCAATGGGACAGTCCTTAAGTATATCCACTACTTCTGTATGGCTCAGGTTCTGAAAACTGGTCCTGGGTaGCACTTGTTGCCTACTTTC +
Preference number: 4 (lower is better)
Translates to: SNGTVLKYIHYFCMAQVLKTGPG*HLLPTF
Trigger: GAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTT...CAGAACCTGAGCCATACAGAAGTAGTGGATATACTTAAGGACTGTCCCATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHNPFEN*SWVALV
Trigger: AACAAGTGCCACCCAGGACCAGTTTTCGAATGGATT...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGATGAACATCCAATTCCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTCCATTGCGGGCTGCGTaGTGCATGAGGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: KMNIQFLIIWTRGIHSKTPLRAA*CMRSMT
Trigger: TGTCATCGACCTCATGCACCACGCAGCCCGCAATGG...AGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGGAATTGGATGTTCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TCTGATATACTTGTCCGGTATCTGTATCACTGGAACAAATCAAAACAAGACCCCCAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SDILVRYLYHWNKSKQDPQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...GGGGTCTTGTTTTGATTTGTTCCAGTGATACAGATACCGGACAAGTATATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAATGTTGATGATAGACTaGCCATTCACTGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEMLMID*PFTARI
Trigger: GATCCTAGCAGTGAATGGCCAGTCTATCATCAACAT...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNRLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNRLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLRLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCAATGGGACAGTCCTTAAGTATATCCACTACTTCTGTATGGCTCAGGTTCTGCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SNGTVLKYIHYFCMAQVLPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...CAGAACCTGAGCCATACAGAAGTAGTGGATATACTTAAGGACTGTCCCATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCATCCCAAGTTGGGCCTaGGCTTATCTGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSIPSWA*AYLVGR
Trigger: CCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGAT...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGCATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGCATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGTCTCCCACCTTTCCATaGTCCTCAGTCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLSPTFP*SSVSVF
Trigger: GAAGACACTGACTGAGGACCATGGAAAGGTGGGAGA...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR CCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCTCTCCCACCTTTCCATaGTCCTCAGTCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFSPTFP*SSVSVF
Trigger: GAAGACACTGACTGAGGACCATGGAAAGGTGGGAGA...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp CATGTGCCTGTAGTCCTACCTACTGGAGAAGCTGAGGTGAAGGATCACTTGAGCATCCTAGAATGTCTATaGAAATGCAAAGGACCTAGA +
Preference number: 4 (lower is better)
Translates to: HVPVVLPTGEAEVKDHLSILECL*KCKGPR
Trigger: TCTAGGTCCTTTGCATTTCCATAGACATTCTAGGAT...GCTCAAGTGATCCTTCACCTCAGCTTCTCCAGTAGGTAGGACTACAGGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CAA 72 bp GATGTTTACACTCGCCAGACATTTAGTGAGCAGATGTaGGGCTACAACACTACCACTGGGTTAGGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: DVYTRQTFSEQM*GYNTTTGLGSS
Trigger: ACTACTACCTAACCCAGTGGTAGTGTTGTAGCCCAACATCTGCTCACTAAATGTCTGGCGAGTGTAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CAA 72 bp TGTGAATGGAGGCTGTCGGATGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGACCTGTAACTATTTTC +
Preference number: 4 (lower is better)
Translates to: CEWRLSDVWFHI*PCFHFRPVTIF
Trigger: GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATCCGACAGCCTCCATTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGGTGCTGTCCCTTGAATaGCACTCAAGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKVLSLE*HSRLWP
Trigger: GGGCCACAGCCTTGAGTGTCATTCAAGGGACAGCAC...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354212.9
CDS-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAGAGGTTGTCACGAATaGTTTGCTGAAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTRGCHE*FAEAHG
Trigger: ACCATGAGCTTCAGCAAATCATTCGTGACAACCTCT...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAATTGTGTTATGGTCAATaGAGTAGACTTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRELCYGQ*SRLRPS
Trigger: AGAAGGGCGAAGTCTACTTCATTGACCATAACACAA...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTTGTGTTATGGTCAATaGAGTAGACTTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKLCYGQ*SRLRPS
Trigger: AGAAGGGCGAAGTCTACTTCATTGACCATAACACAA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVSCVFH*PSLEVA
Trigger: GGCCACCTCCAGTGATGGTCAATGGAAGACACAACT...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATTCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACTCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATCAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACTTCACGATGTCAGCGTaGGGCATGTTGATGATAGAC +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNFTMSA*GMLMID
Trigger: GTCTATCATCAACATGCCTCACGCTGACATCGTGAA...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTCACGATGTCAGCGTaGGGCATGTTGATGATAGAC +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQFTMSA*GMLMID
Trigger: GTCTATCATCAACATGCCTCACGCTGACATCGTGAA...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCTTCACGATGTCAGCGTaGGGCATGTTGATGATAGAC +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFFTMSA*GMLMID
Trigger: GTCTATCATCAACATGCCTCACGCTGACATCGTGAA...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAATCTCCATGTCCACAGTaGAATAATCAAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKSPCPQ*NNQNPG
Trigger: CCCAGGATTTTGATTATTTCACTGTGGACATGGAGA...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAATCTCCATGTCCACAGTaGAATAATCAAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRESPCPQ*NNQNPG
Trigger: CCCAGGATTTTGATTATTTCACTGTGGACATGGAGA...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAATTGATTTCAATGATTTaGTCTCCTACCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQLISMI*SPTLIL
Trigger: GAGGATGAGGGTAGGAGATCAAATCATTGAAATCAA...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKLLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGGAAACATGTCATGGGTaGACGGTTCCGAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLETCHG*TVPNVS
Trigger: TGACACATTCGGAACCGTTCACCCATGACATGTTTC...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTGGAATGGGATTTAGATaGTGTGCTGTCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTGMGFR*CAVFTG
Trigger: ACCTGTGAAGACAGCACATCATCTAAATCCCATTCC...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCCTGCTTGCAGGCTGCTaGATGAGCTCTGGAAGATTA +
Preference number: 4 (lower is better)
Translates to: SAPLFSCFHTQHFGPNHFLLAGC*MSSGRL
Trigger: TAATCTTCCAGAGCTCATTCAGCAGCCTGCAAGCAG...GAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR TCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGTCTCAGCTGAGCTTTaGTTTTTCAACATGGATGTC +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHVSAEL*FFNMDV
Trigger: GACATCCATGTTGAAAAATCAAAGCTCAGCTGAGAC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000626691.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTCCCTGGGAAACACAGTaGGGCTTCATCACTAAAAGA +
Preference number: 4 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLPWETQ*GFITKR
Trigger: TCTTTTAGTGATGAAGCCTCACTGTGTTTCCCAGGG...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGGCTGTTTTGAGTGCTTTGAATAGGCAACCACATGTTTGTCACACGTGTGTCTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: QAVLSALNRQPHVCHTCVWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...GACACACGTGTGACAAACATGTGGTTGCCTATTCAAAGCACTCAAAACAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAATTTTCCATCCTGTGCTaGAGGCCCATCCGGAATCAC +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQFSILC*RPIRNH
Trigger: GTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAA...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAATGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCTGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQRFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHNSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIANSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGT +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNNSFED*LDSPIG
Trigger: ACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTT...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATACATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: CSFIFVFPYPTFWAKSLQHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...TTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR GCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGCATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACATGAAAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FIFVFPYPTFWAKSLQHERLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...TTCATGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR GCA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCAGGTTGCGTAGTCACTaGGTGGAGAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLIRLRSH*VESCGG
Trigger: CCCACCACAGCTCTCCACGCAGTGACTACGCAACCT...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAATTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCTTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: PDLMSSIALACVMSLVLSFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTSGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAACATCCAAGTCCTTCATaGAGTGGGGAGGAATATTTT +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEHPSPS*SGEEYF
Trigger: AAAATATTCCTCCCCACTGCATGAAGGACTTGGATG...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGTCTCAGTTTCAGCTTaGTCCGTGCAGTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHVSVSA*SVQFDF
Trigger: AAAATCAAACTGCACGGAGCAAGCTGAAACTGAGAC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAGTCTCAGTTTCAGCTTaGTCCGTGCAGTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKVSVSA*SVQFDF
Trigger: AAAATCAAACTGCACGGAGCAAGCTGAAACTGAGAC...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGATAAGACAAATACTCTaGCTCTGCTCTGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGIRQIL*LCSVKV
Trigger: CACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGATAAGACAAATACTCTaGCTCTGCTCTGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQIRQIL*LCSVKV
Trigger: CACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGATTGCTTTTACAAGCTaGAAGATCCTTCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQIAFTS*KILHLR
Trigger: CCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAAT...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTACAGTACCAGGACGTaGAGCTACACTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQYSTRT*SYTTEA
Trigger: TGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTA...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAGTAGCTGTGAACTGTaGAAACTAGAGTTTATGCCA +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQSSCEL*KLEFMP
Trigger: TGGCATAAACTCTAGTTTGCACAGTTCACAGCTACT...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACACCCTGAAGATATGTTaGTTGTCTCTGGCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNTLKIC*LSLAPV
Trigger: AACTGGGGCCAGAGACAAGCAACATATCTTCAGGGT...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAATAAGGACCCAGGCCTaGGACTCAGCTCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQIRTQA*DSALES
Trigger: AGACTCAAGAGCTGAGTCGCAGGCCTGGGTCCTTAT...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTTCTGCTGGCGGCTTTaGGGTACCGTAGTAATTGTC +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVFCWRL*GTVVIV
Trigger: GACAATTACTACGGTACCCCAAAGCCGCCAGCAGAA...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTACTTGGAGTGGCTCCTaGAAGTATCTGGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIATWSGS*KYLVCY
Trigger: GTAACAGACCAGATACTTCCAGGAGCCACTCCAAGT...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACTTCAGCACTTGGAGTaGCTCCTGGAAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRLQHLE*LLEVSG
Trigger: ACCAGATACTTCCAGGAGCCACTCCAAGTGCTGAAG...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGCTGTTTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTGCTTTTCCTTCAGCACTTaGAGTGGCTCCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: SCFGYTRAMLSVVSIMGCFSFST*SGSWKY
Trigger: ATACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAA...GCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATCAGGAGGCTCTATACTaGCTTTCTCCATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHQEALY*LSPCCS
Trigger: TGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTG...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGATGTTCACTGGATTCTaGTGTTACTACTACTCCATT +
Preference number: 4 (lower is better)
Translates to: TATQDTAITRRGNDQPREMFTGF*CYYYSI
Trigger: AATGGAGTAGTAGTAACACCAGAATCCAGTGAACAT...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGTGTCTTCATGTTCACTaGATTCTGGTGTTACTACTA +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPCLHVH*ILVLLL
Trigger: TAGTAGTAACACCAGAATCCAGTGAACATGAAGACA...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAAGGCTGACTGTACACTaGTGCAGGATAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQRLTVH*CRIRLG
Trigger: TCCCAGCCTTATCCTGCACCAGTGTACAGTCAGCCT...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGTCTTCAGGTTTAGTTaGCTTTGTGTCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHVFRFS*LCVIHL
Trigger: CAGATGGATGACACAAAGCCAACTAAACCTGAAGAC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGGTCTTCAGGTTTAGTTaGCTTTGTGTCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLVFRFS*LCVIHL
Trigger: CAGATGGATGACACAAAGCCAACTAAACCTGAAGAC...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGATCAGGCAATGGGTCTaGTTCCTCATTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQIRQWV*FLIVFR
Trigger: CCTGAAGACAATGAGGAACCAGACCCATTGCCTGAT...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACATCAGGCAATGGGTCTaGTTCCTCATTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNIRQWV*FLIVFR
Trigger: CCTGAAGACAATGAGGAACCAGACCCATTGCCTGAT...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGTTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CACTTCCGACCTGTAACTATTTTCGTGTCCTTGCAGCTGAAGTGGTTGAGGTGGTTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: HFRPVTIFVSLQLKWLRWFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...CCACCTCAACCACTTCAGCTGCAAGGACACGAAAATAGTTACAGGTCGGAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHNVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTACATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATGACACATTGTCATCATaGACGGGCGGTGGATACGTG +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHDTLSS*TGGGYV
Trigger: CACGTATCCACCGCCCGTCCATGATGACAATGTGTC...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519748.5
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519748.5
CDS-3UTR CCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACAAAACTGGTCCTGGGTaGCACTTGTTGCCTACTTTC +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNKTGPG*HLLPTF
Trigger: GAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTT...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGATTCGAAAACTGGTCCTaGGTGGCACTTGTTGCCTAC +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRFENWS*VALVAY
Trigger: GTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAA...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000628980.2
CDS-3UTR CCA 90 bp TCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACATCACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: SFIFVFPYPTFWAKSLQHHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...ATGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACCGTGGAGAGCTGTGGTaGGTGGATACAGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYRGELW*VDTEPG
Trigger: TCCAGGCTCTGTATCCACCCACCACAGCTCTCCACG...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACATGAAATGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFSCFHTQHFGPNHFNMKCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...TTTCATGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGTGCGTAGTCACTGCGTaGAGAGCTGTGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKCVVTA*RAVVGG
Trigger: TCCACCCACCACAGCTCTCCACGCAGTGACTACGCA...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACATGCAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: PLFSCFHTQHFGPNHFNMQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...CATGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACAGCGTGGTTGCTGTTaGTGTAGGTTGCGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQQRGCC*CRLRSH
Trigger: GTGACTACGCAACCTACACCAACAGCAACCACGCTG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAATGTTGATGATAGACTaGCCATTCACTGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEMLMID*PFTARI
Trigger: GATCCTAGCAGTGAATGGCCAGTCTATCATCAACAT...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGATGTTGATGATAGACTaGCCATTCACTGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLMLMID*PFTARI
Trigger: GATCCTAGCAGTGAATGGCCAGTCTATCATCAACAT...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCATCCTTGCAGCTGAAGTaGTTGAGGTGGTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMASLQLK*LRWCWL
Trigger: CAGCCAGCACCACCTCAACCACTTCAGCTGCAAGGA...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFRLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTCCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACCTGTAGTCTGTGAATaGAGGCTGTCGGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIPVVCE*RLSDVW
Trigger: CCAGACATCCGACAGCCTCCATTCACAGACTACAGG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTATTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVFDIPS*AWAYLV
Trigger: CACCAGATAAGCCCAGGCCCAACTTGGGATATCAAA...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGTTTGATATCCCAAGTTaGGCCTGGGCTTATCTGGTG +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLFDIPS*AWAYLV
Trigger: CACCAGATAAGCCCAGGCCCAACTTGGGATATCAAA...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCGATGCTCCCAGGCCTTaGTGCCTCGTGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLDAPRP*CLVDLC
Trigger: GCATAGATCCACGAGGCACCAAGGCCTGGGAGCATC...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATAAACGTACCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHKRTIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGGTACGTTT...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGATACCATTCCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRYHSIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGGAATGGTA...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR CCA 90 bp TCTGATATACTTGTCCGGTATCTGTATCACTGGAACAAATCAAAACAAGACCCCTGTGCCCACAGCCTGTaGCTTTCAGGCTATACAGTA +
Preference number: 4 (lower is better)
Translates to: SDILVRYLYHWNKSKQDPCAHSL*LSGYTV
Trigger: TACTGTATAGCCTGAAAGCCACAGGCTGTGGGCACA...GGGGTCTTGTTTTGATTTGTTCCAGTGATACAGATACCGGACAAGTATATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CCA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTCCTTATGTGGCCTTGTaGTGCCTAGAGCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCPYVAL*CLELCS
Trigger: TGAACAGAGCTCTAGGCACCACAAGGCCACATAAGG...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp GTCCTGAACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGCACAGCCCACAAATTGGCAAATaGGAAAACCAGGGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: VLNSIIPNCEKIFLQQHSPQIGK*ENQGLA
Trigger: GGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGG...GCTGTGCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TCCACAAATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACCCTAAGTCCACAAATTaGCAAATGGGAAAACCAGGG +
Preference number: 4 (lower is better)
Translates to: STNWQMGKPGLSLILFLYPKSTN*QMGKPG
Trigger: CCCTGGTTTTCCCATTTGCCAATTTGTGGACTTAGG...GTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CAA 72 bp AGACTTTGTAGAGTGCTGCTCACAAATGCCTGGTGTTaGCTGTCCGTTTCCAAACAAGGAATCAACAATGTG +
Preference number: 4 (lower is better)
Translates to: RLCRVLLTNAWC*LSVSKQGINNV
Trigger: CACATTGTTGATTCCTTGTTTGGAAACGGACAGCAAACACCAGGCATTTGTGAGCAGCACTCTACAAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAAGAGGTTGTCACGAATaGTTTGCTGAAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVRGCHE*FAEAHG
Trigger: ACCATGAGCTTCAGCAAATCATTCGTGACAACCTCT...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCTTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TCCACAAATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACCAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: STNWQMGKPGLSLILFLYQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...GTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAACCAGGTTGACACTCTaGCCAATAGGAACAGACTGG +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQTRLTL*PIGTDW
Trigger: CCAGTCTGTTCCTATTGGTCAGAGTGTCAACCTGGT...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTACGTGCCGTCTAGCTaGCCATCAGTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLYVPSS*PSVGME
Trigger: CTCCATGCCAACTGATGGTCAGCTAGACGGCACGTA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACATGAACTCCCCCGAGGATTCTaGAGCCAAATCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: FIFVFPYPTFWAKSLQHELPRGF*SQIQTP
Trigger: TGGAGTCTGGATTTGGCTTCAGAATCCTCGGGGGAG...TTCATGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR TCA 90 bp TGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAATCTCTTTGCGGTGAATaGCCACATCACTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: CSFIFVFPYPTFWAKSLQSLCGE*PHHWSA
Trigger: TGCAGACCAGTGATGTGGTCATTCACCGCAAAGAGA...TTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR TCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATTCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGATCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACAGGACTCCCATCAATaGTGCGTCCGATTTTATGGG +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQQDSHQ*CVRFYG
Trigger: CCCATAAAATCGGACGCATCATTGATGGGAGTCCTG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGCTGTTGAGCTCCTCCTaGGGAATGATGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKLLSSS*GMMRRV
Trigger: CACCCTTCGCATCATTCCTCAGGAGGAGCTCAACAG...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGCTGCCTGTAGTCTGTaGATGGAGGCTGTCGGATGT +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYAACSL*MEAVGC
Trigger: ACATCCGACAGCCTCCATTCACAGACTACAGGCAGC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTTGATTTCAATGATTTaGTCTCCTACCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKLISMI*SPTLIL
Trigger: GAGGATGAGGGTAGGAGATCAAATCATTGAAATCAA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGCTTCTGGCCGCAGGCTaGAAGCTCCTTTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKLLAAG*KLLWFP
Trigger: AGGAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAG...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACGATATTCCAGTTTGTaGTTGCTCTTAACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRERYSSL*LLLTLS
Trigger: GGACAAAGTTAAGAGCAATCACAAACTGGAATATCG...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGGAGCTTATTTGCATTTaGACTCCTGTAAAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: KLLLRILQLQGEGMISPGELICI*TPVKSK
Trigger: CTTACTCTTTACAGGAGTTCAAATGCAAATAAGCTC...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGGCAAGATCCTTCACTTaGGGCTTTCAGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLARSFT*GFQPYS
Trigger: AGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGC...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTGTCTCAGCTGAGCTTTaGTTTTTCAACATGGATGTC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTVSAEL*FFNMDV
Trigger: GACATCCATGTTGAAAAATCAAAGCTCAGCTGAGAC...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR TCA 90 bp AGCTGTTTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTGCGTCTCAGCTGAGCTTTaGTTTTTCAACATGGATGTC +
Preference number: 4 (lower is better)
Translates to: SCFGYTRAMLSVVSIMGCVSAEL*FFNMDV
Trigger: GACATCCATGTTGAAAAATCAAAGCTCAGCTGAGAC...GCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAAACAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp GTCCTGAACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGCACAGCAATGGGAAACCAGTTTaGGTTCTCCATGACCGATAC +
Preference number: 4 (lower is better)
Translates to: VLNSIIPNCEKIFLQQHSNGKPV*VLHDRY
Trigger: GTATCGGTCATGGAGAACTCAAACTGGTTTCCCATT...GCTGTGCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATGGCAGGAGAATTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNGRRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCC...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAACTGACTGTACACTGGTaGAGGATAAGGCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQLTVHW*RIRLGG
Trigger: CCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGGTCAACATAATAAGTaGCATAAATGGGATCATCGA +
Preference number: 4 (lower is better)
Translates to: QAESSFGFLTSCSRLISQGQHNK*HKWDHR
Trigger: TCGATGATCCCATTTATGGCACTTATTATGTTGACC...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATTCCCTTCAACTGGGATaGATCCCGGGTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNSLQLG*IPGEEW
Trigger: CCACTCTTCACCCGGGATGCATCCCAGTTGAAGGGA...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGATGAACATCCAATTCCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KMNIQFLIIWTRGIHSKTAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...AGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGGAATTGGATGTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGTTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCTCCCATTCCTTATTaGTGGTCCATCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISPPIPY*WSIFCQ
Trigger: CTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATCCTCCCATTCCTTATTaGTGGTCCATCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHPPIPY*WSIFCQ
Trigger: CTGGCAGAAGATGGACCAGCAATAAGGAATGGGAGG...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCG +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTFQLAP*SLIFKA
Trigger: CGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGATAAGACAAATACTCTaGCTCTGCTCTGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKIRQIL*LCSVKV
Trigger: CACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAATTTTTAGACTACAAGTaGAGGGAGGTGGAGCTTATT +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKFLDYK*REVELI
Trigger: AATAAGCTCCACCTCCCTGCACTTGTAGTCTAAAAA...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATACAGTACCAGGACGTaGAGCTACACTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALYSTRT*SYTTEA
Trigger: TGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATTATGTGGCCTTGTGGTaGCTAGAGCTCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHYVALW*LELCSK
Trigger: CTTTGAACAGAGCTCTAGGCACCACAAGGCCACATA...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp GTCCTGAACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGCACAGCGACTTTGTAGAGTGCTaGTCACAAATGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VLNSIIPNCEKIFLQQHSDFVEC*SQMPGV
Trigger: AACACCAGGCATTTGTGAGCAGCACTCTACAAAGTC...GCTGTGCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCTTCAGCACTTGGAGTaGCTCCTGGAAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSLQHLE*LLEVSG
Trigger: ACCAGATACTTCCAGGAGCCACTCCAAGTGCTGAAG...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGCTTCAGCACTTGGAGTaGCTCCTGGAAGTATCTGGT +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVLQHLE*LLEVSG
Trigger: ACCAGATACTTCCAGGAGCCACTCCAAGTGCTGAAG...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTTCCTTCAGCACTTaGAGTGGCTCCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQFSFST*SGSWKY
Trigger: ATACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAA...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAATGTCTTCATGTTCACTaGATTCTGGTGTTACTACTA +
Preference number: 4 (lower is better)
Translates to: RVSHGNMSWVNGSECVKECLHVH*ILVLLL
Trigger: TAGTAGTAACACCAGAATCCAGTGAACATGAAGACA...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGATGAACATCCAATTCCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTAGGCTGACTGTACACTaGTGCAGGATAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KMNIQFLIIWTRGIHSKTRLTVH*CRIRLG
Trigger: TCCCAGCCTTATCCTGCACCAGTGTACAGTCAGCCT...AGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGGAATTGGATGTTCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATATCAGGCAATGGGTCTaGTTCCTCATTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHIRQWV*FLIVFR
Trigger: CCTGAAGACAATGAGGAACCAGACCCATTGCCTGAT...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTACCAGTTATCAGGCAATaGGTCTGGTTCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALPVIRQ*VWFLIV
Trigger: GACAATGAGGAACCAGACCCATTGCCTGATAACTGG...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISNVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAACATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQHYCKG*HHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATG...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AATCATAAAAGGTGCTTCTTTCTTTCAGCTTTGACAGCCTTCACTTGCATTTCAGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: NHKRCFFLSALTAFTCISVISSA*VAPDEA
Trigger: GGCTTCATCTGGGGCCACCCAAGCTGAACTTATGAC...TGAAATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAAGCACCTTTTATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHNPFEN*SWVALV
Trigger: AACAAGTGCCACCCAGGACCAGTTTTCGAATGGATT...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000628980.2
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCCACAAGCTCATCTCCTaGGTGAAGGCGGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLHKLIS*VKAAIS
Trigger: AGAGATGGCCGCCTTCACCCAGGAGATGAGCTTGTG...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: APLFSCFHTQHFGPNHFNGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...GTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGGTGGATACAGAGCCTaGACTTCTCCCGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYGGYRA*TSPVLW
Trigger: CCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGGAGAGCTGTGGTGGGTaGATACAGAGCCTGGACTTC +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKESCGG*IQSLDF
Trigger: GAAGTCCAGGCTCTGTATCCACCCACCACAGCTCTC...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSRLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCGGGTTCGTCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLGFVIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGACGAACCC...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGGGTTCGTCATATTCTaGGACCTGTCCCGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYGFVIF*DLSRAS
Trigger: AGAGGCACGGGACAGGTCCCAGAATATGACGAACCC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTTTTCTTCCCAGATCATaGGAGGCACTATGGGTAATT +
Preference number: 4 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVFLPRS*EALWVI
Trigger: AATTACCCATAGTGCCTCCCATGATCTGGGAAGAAA...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGCTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQLHVAH*FIPLPF
Trigger: AAACGGAAGAGGAATAAATCAGTGAGCAACATGGAG...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCTTGTGTTATGGTCAATaGAGTAGACTTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLLCYGQ*SRLRPS
Trigger: AGAAGGGCGAAGTCTACTTCATTGACCATAACACAA...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCTCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFSWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAATCATTCTCTTTGCGGTaGATGACCACATCACTGGTC +
Preference number: 4 (lower is better)
Translates to: CSFIFVFPYPTFWAKSLQSFSLR*MTTSLV
Trigger: GACCAGTGATGTGGTCATTCACCGCAAAGAGAATGA...TTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR TCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTTTCACGATGTCAGCGTaGGGCATGTTGATGATAGAC +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCFTMSA*GMLMID
Trigger: GTCTATCATCAACATGCCTCACGCTGACATCGTGAA...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCACGATGTCAGCGTaGGGCATGTTGATGATAGAC +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIFTMSA*GMLMID
Trigger: GTCTATCATCAACATGCCTCACGCTGACATCGTGAA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR TCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCTTCCTCCACGAATGCTaGATCCAAATCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISFLHEC*IQILWL
Trigger: GAGCCAAAGGATTTGGATTCAGCATTCGTGGAGGAA...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTCACTCACAGATGCCCTaGAAGGTCCTACATTTCATA +
Preference number: 4 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCHSQMP*KVLHFI
Trigger: TATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTG...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGCTTGGATGAGGTTGTaGTGTCCCTTGAATGACACT +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISAWMRL*CPLNDT
Trigger: AGTGTCATTCAAGGGACAGCACAACCTCATCCAAGC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354212.9
CDS-3UTR GCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAATTTTCCATCCTGTGCTaGAGGCCCATCCGGAATCAC +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQFSILC*RPIRNH
Trigger: GTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAA...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATTTTTCCATCCTGTGCTaGAGGCCCATCCGGAATCAC +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNFSILC*RPIRNH
Trigger: GTGATTCCGGATGGGCCTGCAGCACAGGATGGAAAA...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAACATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATTGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNWPLHY*KGWHHA
Trigger: AGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCA...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKERFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAACATAGCGGTGGGTTTTaGCGGCTACTGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQHSGGF*RLLESH
Trigger: ATGGGATTCCAGTAGCCGGCAAAACCCACCGCTATG...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGCTGTTGGTGTAGGTTaGGTAGTCACTGCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYAVGVG*VVTAWR
Trigger: TCTCCACGCAGTGACTACGCAACCTACACCAACAGC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAGGTGACACTAAGACCTaGATCCTTGATGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQGDTKT*ILDELH
Trigger: GTGAAGCTCATCAAGGATGCAGGTCTTAGTGTCACC...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR GCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGATCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRSGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTTTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCG +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAFQLAP*SLIFKA
Trigger: CGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAA...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCAAATACTCTGCCTCTaGTCTGTCAAAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAQILCL*SVKVQM
Trigger: CATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGCAAATACTCTGCCTCTaGTCTGTCAAAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQQILCL*SVKVQM
Trigger: CATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTG...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCCTTCAGAAACACTTTaGCTTTTAATATGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: EITLLTKKLSISASLGRQPSETL*LLICVA
Trigger: AGCTACACATATTAAAAGGCAAAGTGTTTCTGAAGG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGTTTTTAGACTACAAGTaGAGGGAGGTGGAGCTTATT +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEFLDYK*REVELI
Trigger: AATAAGCTCCACCTCCCTGCACTTGTAGTCTAAAAA...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAATTTTTAGACTACAAGTaGAGGGAGGTGGAGCTTATT +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKFLDYK*REVELI
Trigger: AATAAGCTCCACCTCCCTGCACTTGTAGTCTAAAAA...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATACAGTACCAGGACGTaGAGCTACACTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIYSTRT*SYTTEA
Trigger: TGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAGTAGCTGTGAACTGTaGAAACTAGAGTTTATGCCA +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTSSCEL*KLEFMP
Trigger: TGGCATAAACTCTAGTTTGCACAGTTCACAGCTACT...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAAGTAGCTGTGAACTGTaGAAACTAGAGTTTATGCCA +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKSSCEL*KLEFMP
Trigger: TGGCATAAACTCTAGTTTGCACAGTTCACAGCTACT...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATATCGCACACTCACAGATaGCCTGAAAGGTCCTACATT +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINISHTHR*PERSYI
Trigger: AATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGA...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TTAGTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTTCTGTTCTACTGCTTaGAGGCTGCTGAATGAGCTC +
Preference number: 4 (lower is better)
Translates to: LVLLYFRVSIPNILGQITFCSTA*RLLNEL
Trigger: GAGCTCATTCAGCAGCCTGCAAGCAGTAGAACAGAA...AGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR GCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATTCTGATGTGTCTGTATaGCCGTCTGTTTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHSDVSV*PSVSVC
Trigger: ACAGACAGAAACAGACGGGCATACAGACACATCAGA...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAACACGTGTGTCCTTCATaGATGAGTTCCTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQHVCPS*MSSSLS
Trigger: GGACAATGAGGAACTCATGCATGAAGGACACACGTG...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp TCCACAAATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACGAATGTCTATGGAAATaGAAAGGACCTAGAATAGCC +
Preference number: 4 (lower is better)
Translates to: STNWQMGKPGLSLILFLYECLWK*KGPRIA
Trigger: GGCTATTCTAGGTCCTTTGCATTTCCATAGACATTC...GTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCATCTTTGGATGGAGTGTaGACGAGGAATGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMASLDGV*TRNGED
Trigger: ATCCTCCCCATTCCTCGTCCACACTCCATCCAAAGA...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000419488.5
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCTTTTCCTTCAGCACTTaGAGTGGCTCCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFFSFST*SGSWKY
Trigger: ATACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAA...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCAGGAGGCTCTATACTaGCTTTCTCCATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISQEALY*LSPCCS
Trigger: TGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATCAGGAGGCTCTATACTaGCTTTCTCCATGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHQEALY*LSPCCS
Trigger: TGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTG...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAATGTTCACTGGATTCTaGTGTTACTACTACTCCATT +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGMFTGF*CYYYSI
Trigger: AATGGAGTAGTAGTAACACCAGAATCCAGTGAACAT...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAATGTTCACTGGATTCTaGTGTTACTACTACTCCATT +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEMFTGF*CYYYSI
Trigger: AATGGAGTAGTAGTAACACCAGAATCCAGTGAACAT...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGATGTTCACTGGATTCTaGTGTTACTACTACTCCATT +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKMFTGF*CYYYSI
Trigger: AATGGAGTAGTAGTAACACCAGAATCCAGTGAACAT...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGAGGCTGACTGTACACTaGTGCAGGATAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKRLTVH*CRIRLG
Trigger: TCCCAGCCTTATCCTGCACCAGTGTACAGTCAGCCT...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATAATCAGGCAATGGGTCTaGTTCCTCATTGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIIRQWV*FLIVFR
Trigger: CCTGAAGACAATGAGGAACCAGACCCATTGCCTGAT...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGATTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGTTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAATTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACTTTTTCTCGGAAACCTaGGGCCTGCAGGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYFFSET*GLQGLC
Trigger: ACAAAGCCCCTGCAGGCCCCAGGTTTCCGAGAAAAA...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAAAATGTTCCCTTCAACTaGGATGCATCCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQNVPFN*DASRVK
Trigger: CTTCACCCGGGATGCATCCCAGTTGAAGGGAACATT...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCCAATAGGAACAGACTaGAAAAGTTTGACAACATCT +
Preference number: 4 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHPIGTD*KSLTTS
Trigger: AGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAATCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGGTGAAGCCGAAGCCCTaGGCACCTTTCACAATGGTT +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKVKPKP*APFTMV
Trigger: AACCATTGTGAAAGGTGCCCAGGGCTTCGGCTTCAC...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACATGCGTCCGATTTTATaGGGCACAGTTATAGTGGAT +
Preference number: 4 (lower is better)
Translates to: ACDSENKLKRRETEPKKNMRPIL*GTVIVD
Trigger: ATCCACTATAACTGTGCCCCATAAAATCGGACGCAT...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATGCGTCCGATTTTATaGGGCACAGTTATAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNMRPIL*GTVIVD
Trigger: ATCCACTATAACTGTGCCCCATAAAATCGGACGCAT...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATATGCGTCCGATTTTATaGGGCACAGTTATAGTGGAT +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHMRPIL*GTVIVD
Trigger: ATCCACTATAACTGTGCCCCATAAAATCGGACGCAT...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAAGGCTGTCGGATGTCTaGTTTCACATCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMARLSDV*FHILPC
Trigger: GCAAGGCAAGATGTGAAACCAGACATCCGACAGCCT...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KKLSISASLGRQKSLFIKFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ASWIYACDSENKLKRRETFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGCCAAGGGTGAGCCATaGAAACATGTCATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAAKGEP*KHVMGE
Trigger: TTCACCCATGACATGTTTCCATGGCTCACCCTTGGC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCCCATCTCTGCTAGCCTaGGACGACAGAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLPSLLA*DDRKAS
Trigger: AGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGG...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATACAAGTGCAGGGAGGTaGAGCTTATTTGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHTSAGR*SLFAFE
Trigger: TTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGT...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTAAAAGCAGAAAAAGTTaGAGGACTAACACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVKSRKS*RTNTLW
Trigger: CCAGAGAGTGTTAGTCCTCCAACTTTTTCTGCTTTT...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAAGAGGTTGTCACGAATaGTTTGCTGAAGCTCATGGT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQRGCHE*FAEAHG
Trigger: ACCATGAGCTTCAGCAAATCATTCGTGACAACCTCT...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRLHVAH*FIPLPF
Trigger: AAACGGAAGAGGAATAAATCAGTGAGCAACATGGAG...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGCTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVLHVAH*FIPLPF
Trigger: AAACGGAAGAGGAATAAATCAGTGAGCAACATGGAG...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAATCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQSWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCTCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISSWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATATCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINISWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAISWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTCAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTACAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAATGGAGTGCAGAGAATaGGGCGGCCGATCTGTTATA +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQMECRE*GGRSVI
Trigger: TATAACAGATCGGCCGCCTCATTCTCTGCACTCCAT...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGAGAATATGGAAAGGATaGAGCCTCATTCATTCGGGC +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVRIWKG*SLIHSG
Trigger: GCCCGAATGAATGAGGCTTCATCCTTTCCATATTCT...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAAGAATATGGAAAGGATaGAGCCTCATTCATTCGGGC +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQRIWKG*SLIHSG
Trigger: GCCCGAATGAATGAGGCTTCATCCTTTCCATATTCT...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATAAGAATATGGAAAGGATaGAGCCTCATTCATTCGGGC +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIRIWKG*SLIHSG
Trigger: GCCCGAATGAATGAGGCTTCATCCTTTCCATATTCT...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGGAGCTTATTTGCATTTaGACTCCTGTAAAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEELICI*TPVKSK
Trigger: CTTACTCTTTACAGGAGTTCAAATGCAAATAAGCTC...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCTTTGAGATGGACCTaGTCGCCCCTTTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISPLRWT*SPLLLF
Trigger: AAAAAGTAAAAGGGGCGATCAGGTCCATCTCAAAGG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGCAAGATCCTTCACTTaGGGCTTTCAGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISARSFT*GFQPYS
Trigger: AGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATACACTCACAGATGCCCTaGAAGGTCCTACATTTCATA +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIHSQMP*KVLHFI
Trigger: TATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTG...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCTACTGTGTACTCAAATaGACAGTGGACTATCAGTCA +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFYCVLK*TVDYQS
Trigger: TGACTGATAGTCCACTGTTCATTTGAGTACACAGTA...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACTTAAACTTCACACCCTaGAGATATGTTGCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNLNFTP*RYVACL
Trigger: GAGACAAGCAACATATCTTCAGGGTGTGAAGTTTAA...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp AAGATGAACATCCAATTCCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTTTATCTGCACTAGTCTaGTGTGTCTGTATGCCCGTC +
Preference number: 4 (lower is better)
Translates to: KMNIQFLIIWTRGIHSKTLSALV*CVCMPV
Trigger: GACGGGCATACAGACACATCAGACTAGTGCAGATAA...AGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGGAATTGGATGTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp AATCATAAAAGGTGCTTCTTTCTTTCAGCTTTGACAGCCTTCACTTGCATTTCACTGCGACTCAGCTCTTaGGTCTGCTTATCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: NHKRCFFLSALTAFTCISLRLSS*VCLSQR
Trigger: TCTTTGAGATAAGCAGACTCAAGAGCTGAGTCGCAG...TGAAATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAAGCACCTTTTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTGGTCAACATAATAAGTaGCATAAATGGGATCATCGA +
Preference number: 4 (lower is better)
Translates to: CKILHLRLSALFSSCQTTGQHNK*HKWDHR
Trigger: TCGATGATCCCATTTATGGCACTTATTATGTTGACC...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AGCTGTTTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTGCGGTCAACATAATAAGTaGCATAAATGGGATCATCGA +
Preference number: 4 (lower is better)
Translates to: SCFGYTRAMLSVVSIMGCGQHNK*HKWDHR
Trigger: TCGATGATCCCATTTATGGCACTTATTATGTTGACC...GCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAAACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGCATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCCATTTTTCCATCCTGTaGTGCAGGCCCATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLIHFSIL*CRPIRN
Trigger: ATTCCGGATGGGCCTGCAGCACAGGATGGAAAAATG...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLRFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIARFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTTTTTGCACAGCGATCTaGAGGACTCCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCFCTAI*RTPIND
Trigger: ATCATTGATGGGAGTCCTGCAGATCGCTGTGCAAAA...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATCTGGTTTCACATCTTaGCTTGCTTTCACTTCCGAC +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAISGFTS*LAFTSD
Trigger: GTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACTTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: SPRTLTDALKGPTFHILNFDEFY*SGMCHV
Trigger: GACATGACACATGCCAGAGCAATAGAACTCATCAAA...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCTTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCG +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFFQLAP*SLIFKA
Trigger: CGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAA...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCGTCTCAGTTTCAGCTTaGTCCGTGCAGTTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFVSVSA*SVQFDF
Trigger: AAAATCAAACTGCACGGAGCAAGCTGAAACTGAGAC...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAATCTATGAGCTAAACTaGAAAATTCTGACTTATGGC +
Preference number: 4 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREIYELN*KILTYG
Trigger: GCCATAAGTCAGAATTTTGCAGTTTAGCTCATAGAT...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAATCTATGAGCTAAACTaGAAAATTCTGACTTATGGC +
Preference number: 4 (lower is better)
Translates to: ITLLTKKLSISASLGRQKIYELN*KILTYG
Trigger: GCCATAAGTCAGAATTTTGCAGTTTAGCTCATAGAT...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTACAAATACTCTGCCTCTaGTCTGTCAAAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALQILCL*SVKVQM
Trigger: CATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTG...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAATACTCTGCCTCTaGTCTGTCAAAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRQILCL*SVKVQM
Trigger: CATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTG...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTATAAGACAAATACTCTaGCTCTGCTCTGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAIRQIL*LCSVKV
Trigger: CACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAACCTTCAGAAACACTTTaGCTTTTAATATGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: KLSISASLGRQKSLFIKEPSETL*LLICVA
Trigger: AGCTACACATATTAAAAGGCAAAGTGTTTCTGAAGG...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATTTTTTAGACTACAAGTaGAGGGAGGTGGAGCTTATT +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHFLDYK*REVELI
Trigger: AATAAGCTCCACCTCCCTGCACTTGTAGTCTAAAAA...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGATTGCTTTTACAAGCTaGAAGATCCTTCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQIAFTS*KILHLR
Trigger: CCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAAT...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAAAATATGGGGACCCATaGTTGTCACTTTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRKYGDP*LSLFMH
Trigger: GTGCATGAAAAGTGACAAGCATGGGTCCCCATATTT...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR GCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCCACCTCAAGTTTTGGTaGTTTTCATGTAATGACCAC +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFHLKFW*FSCNDH
Trigger: GTGGTCATTACATGAAAAGCACCAAAACTTGAGGTG...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATAGTGCTGCTCACAAATaGCTGGTGTTTGCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNSAAHK*LVFAVR
Trigger: ACGGACAGCAAACACCAGGCATTTGTGAGCAGCACT...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTTTTCCTTCAGCACTTaGAGTGGCTCCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVFSFST*SGSWKY
Trigger: ATACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATGTTCACTGGATTCTaGTGTTACTACTACTCCATT +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKMFTGF*CYYYSI
Trigger: AATGGAGTAGTAGTAACACCAGAATCCAGTGAACAT...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAATGTCTTCATGTTCACTaGATTCTGGTGTTACTACTA +
Preference number: 4 (lower is better)
Translates to: TLPLLCQSANEVMETGFKCLHVH*ILVLLL
Trigger: TAGTAGTAACACCAGAATCCAGTGAACATGAAGACA...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAGTTCCAAGTTCTGTGTaGGGCATGTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQVPSSV*GMLCCC
Trigger: ACAGCAACATAACATGCCCCACACAGAACTTGGAAC...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATATCCCGGGTGAAGAGTaGTTTTTCTCGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNIPGEE*FFSETW
Trigger: CCAGGTTTCCGAGAAAAACCACTCTTCACCCGGGAT...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAG +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQDHHWR*PLHYCK
Trigger: CTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: SSHTHRCPERSYISYFKHSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCATGTTGATGATAGACTaGCCATTCACTGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFMLMID*PFTARI
Trigger: GATCCTAGCAGTGAATGGCCAGTCTATCATCAACAT...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGAACAAGTGCAGGGAGGTaGAGCTTATTTGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRTSAGR*SLFAFE
Trigger: TTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGT...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTTAGTGCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACCTGCTGAATGAGCTCTaGAAGATTATAGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: LSAPLFSCFHTQHFGPNHLLNEL*KIIVDP
Trigger: TGGATCCACTATAATCTTCCAGAGCTCATTCAGCAG...GTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGCACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTAAAGGACTGAAAGTCTaGGATAGGACAGACAATTAC +
Preference number: 4 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLKGLKV*DRTDNY
Trigger: GTAATTGTCTGTCCTATCCCAGACTTTCAGTCCTTT...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCATCACGAATGATTTGCTaGAGCTCATGGTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMASRMIC*SSWSTE
Trigger: TTCTGTGGACCATGAGCTTCAGCAAATCATTCGTGA...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISLHVAH*FIPLPF
Trigger: AAACGGAAGAGGAATAAATCAGTGAGCAACATGGAG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTTGTGTTATGGTCAATaGAGTAGACTTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVLCYGQ*SRLRPS
Trigger: AGAAGGGCGAAGTCTACTTCATTGACCATAACACAA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAATTGTGTTATGGTCAATaGAGTAGACTTCGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQLCYGQ*SRLRPS
Trigger: AGAAGGGCGAAGTCTACTTCATTGACCATAACACAA...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AATCATAAAAGGTGCTTCTTTCTTTCAGCTTTGACAGCCTTCACTTGCATTTCATCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: NHKRCFFLSALTAFTCISSWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...TGAAATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAAGCACCTTTTATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNRPGHP*MSSICF
Trigger: GAAACAAATACTTGACATTCAGGGATGCCCTGGCCT...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTCTCCATGTCCACAGTaGAATAATCAAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVSPCPQ*NNQNPG
Trigger: CCCAGGATTTTGATTATTTCACTGTGGACATGGAGA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTGATTTCAATGATTTaGTCTCCTACCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALLISMI*SPTLIL
Trigger: GAGGATGAGGGTAGGAGATCAAATCATTGAAATCAA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCGATATTCCAGTTTGTaGTTGCTCTTAACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFRYSSL*LLLTLS
Trigger: GGACAAAGTTAAGAGCAATCACAAACTGGAATATCG...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAILLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGAAACATGTCATGGGTaGACGGTTCCGAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQETCHG*TVPNVS
Trigger: TGACACATTCGGAACCGTTCACCCATGACATGTTTC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGGAGCTTATTTGCATTTaGACTCCTGTAAAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQELICI*TPVKSK
Trigger: CTTACTCTTTACAGGAGTTCAAATGCAAATAAGCTC...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACATTTGCAGGCTGCTGAATaGGCTCTGGAAGATTATAGT +
Preference number: 4 (lower is better)
Translates to: SFIFVFPYPTFWAKSLQHLQAAE*ALEDYS
Trigger: ACTATAATCTTCCAGAGCTCATTCAGCAGCCTGCAA...ATGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR GCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGTCAACAATTCCTCCTTaGTTGACACACTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKSTIPP*LTHLSR
Trigger: CCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGA...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR GCA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAGGTCAACATAATAAGTaGCATAAATGGGATCATCGA +
Preference number: 4 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVGQHNK*HKWDHR
Trigger: TCGATGATCCCATTTATGGCACTTATTATGTTGACC...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCGGTCAACATAATAAGTaGCATAAATGGGATCATCGA +
Preference number: 4 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLGQHNK*HKWDHR
Trigger: TCGATGATCCCATTTATGGCACTTATTATGTTGACC...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGGGTCAACATAATAAGTaGCATAAATGGGATCATCGA +
Preference number: 4 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQGQHNK*HKWDHR
Trigger: TCGATGATCCCATTTATGGCACTTATTATGTTGACC...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp GTCCTGAACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGCACAGCGGTCAACATAATAAGTaGCATAAATGGGATCATCGA +
Preference number: 4 (lower is better)
Translates to: VLNSIIPNCEKIFLQQHSGQHNK*HKWDHR
Trigger: TCGATGATCCCATTTATGGCACTTATTATGTTGACC...GCTGTGCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALRFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTTCACATCTTGCCTTaGTTTCACTTCCGACCTGTA +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIFHILP*FHFRPV
Trigger: TACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAATAAGACAAATACTCTaGCTCTGCTCTGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALIRQIL*LCSVKV
Trigger: CACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTTTTAGACTACAAGTaGAGGGAGGTGGAGCTTATT +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALFLDYK*REVELI
Trigger: AATAAGCTCCACCTCCCTGCACTTGTAGTCTAAAAA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAAGTAGCTGTGAACTGTaGAAACTAGAGTTTATGCCA +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALSSCEL*KLEFMP
Trigger: TGGCATAAACTCTAGTTTGCACAGTTCACAGCTACT...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCACTTGGAGTGGCTCCTaGAAGTATCTGGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLTWSGS*KYLVCY
Trigger: GTAACAGACCAGATACTTCCAGGAGCCACTCCAAGT...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCATGTTCACTGGATTCTaGTGTTACTACTACTCCATT +
Preference number: 4 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFMFTGF*CYYYSI
Trigger: AATGGAGTAGTAGTAACACCAGAATCCAGTGAACAT...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGTGTCTTCATGTTCACTaGATTCTGGTGTTACTACTA +
Preference number: 4 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLCLHVH*ILVLLL
Trigger: TAGTAGTAACACCAGAATCCAGTGAACATGAAGACA...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGTCTTCAGGTTTAGTTaGCTTTGTGTCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISVFRFS*LCVIHL
Trigger: CAGATGGATGACACAAAGCCAACTAAACCTGAAGAC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGCCAGTTATCAGGCAATaGGTCTGGTTCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKPVIRQ*VWFLIV
Trigger: GACAATGAGGAACCAGACCCATTGCCTGATAACTGG...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GTCCTGAACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGCACAGCTTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VLNSIIPNCEKIFLQQHSFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...GCTGTGCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTTTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTCCATTGACCATCACTaGAGGTGGCCTCTCCATTAT +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLSIDHH*RWPLHY
Trigger: ATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAAAAACTGGTCCTGGGTaGCACTTGTTGCCTACTTTC +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQKTGPG*HLLPTF
Trigger: GAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTT...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000628980.2
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCGGTTTTGCCGGCTACTaGAATCCCATCAACATACAC +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLGFAGY*NPINIH
Trigger: GTGTATGTTGATGGGATTCCAGTAGCCGGCAAAACC...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGATGCGTCCGATTTTATaGGGCACAGTTATAGTGGAT +
Preference number: 4 (lower is better)
Translates to: KPLHKGTAALPILIKQIVMRPIL*GTVIVD
Trigger: ATCCACTATAACTGTGCCCCATAAAATCGGACGCAT...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAATGCGTCCGATTTTATaGGGCACAGTTATAGTGGAT +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIMRPIL*GTVIVD
Trigger: ATCCACTATAACTGTGCCCCATAAAATCGGACGCAT...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACCCCATTCCTTATTGCTaGTCCATCTTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYPIPYC*SIFCQS
Trigger: AGACTGGCAGAAGATGGACCAGCAATAAGGAATGGG...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCACAAGTGCAGGGAGGTaGAGCTTATTTGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISTSAGR*SLFAFE
Trigger: TTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGT...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATGCACATGGAGAGACTaGAAGGTACCATTCCATATT +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAICTWRD*KVPFHI
Trigger: AATATGGAATGGTACCTTCCAGTCTCTCCATGTGCA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR CCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGGCCACCTCAAGTTTTaGTGCTTTTCATGTAATGAC +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCGHLKF*CFSCND
Trigger: GTCATTACATGAAAAGCACCAAAACTTGAGGTGGCC...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
3UTR CAA 72 bp ACGACAGAAAAGCCTCTTCATAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAAATTGTGGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TTEKPLHKGTAA*PILIKQIVVLQ
Trigger: TTGAAGGACCACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTTTTCTGTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCTTTGAAATCGTAAGTTaGGGTAGTGACGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KIKLLLRILQLQGEGMISFEIVS*GSDEGL
Trigger: AAGACCTTCGTCACTACCTCAACTTACGATTTCAAA...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCTCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLISWIQP*CCLCVM
Trigger: CATAACACAAAGACAACATCATGGCTGGATCCACGA...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTTTTTAGGGTGGTGCTaGGGAATGTTCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLFLGWC*GMFPST
Trigger: AGTTGAAGGGAACATTCCTCAGCACCACCCTAAAAA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCATCTCCATGTCCACAGTaGAATAATCAAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMASPCPQ*NNQNPG
Trigger: CCCAGGATTTTGATTATTTCACTGTGGACATGGAGA...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAACCTTTGAGATGGACCTaGTCGCCCCTTTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQPLRWT*SPLLLF
Trigger: AAAAAGTAAAAGGGGCGATCAGGTCCATCTCAAAGG...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGGCAAGATCCTTCACTTaGGGCTTTCAGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKARSFT*GFQPYS
Trigger: AGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGC...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTTACTGTGTACTCAAATaGACAGTGGACTATCAGTCA +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCYCVLK*TVDYQS
Trigger: TGACTGATAGTCCACTGTTCATTTGAGTACACAGTA...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTCCTTTGAGATAGTCTaGTGCATAAACAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVSFEIV*CINNVR
Trigger: CCTAACATTGTTTATGCATCAGACTATCTCAAAGGA...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTGGTCAACATAATAAGTaGCATAAATGGGATCATCGA +
Preference number: 4 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCGQHNK*HKWDHR
Trigger: TCGATGATCCCATTTATGGCACTTATTATGTTGACC...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCATCACACTTTTCACCTaGAGAAACTCATCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLIITLFT*RNSSGS
Trigger: CGAGCCTGATGAGTTTCTGCAGGTGAAAAGTGTGAT...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAKFDNI*MSVSKD
Trigger: GTCCTTGGACACACTCATGCAGATGTTGTCAAACTT...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIRFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQRFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTTTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCFDEFY*SGMCHV
Trigger: GACATGACACATGCCAGAGCAATAGAACTCATCAAA...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR GCA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTTTTAGACTACAAGTaGAGGGAGGTGGAGCTTATT +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIFLDYK*REVELI
Trigger: AATAAGCTCCACCTCCCTGCACTTGTAGTCTAAAAA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAGTGTCTATAATGGGCTaGTGGGAAACAACAACTTTA +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIVSIMG*WETTTL
Trigger: TAAAGTTGTTGTTTCCCAGCAGCCCATTATAGACAC...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATCAAATGCCTGGTGTTTaGTGTCCGTTTCCAAACAAG +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNQMPGV*CPFPNK
Trigger: CTTGTTTGGAAACGGACAGCAAACACCAGGCATTTG...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp GTCCTGAACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGCACAGCCAAACACAAACCAAATaGAAAGACCACTTTGATTAC +
Preference number: 4 (lower is better)
Translates to: VLNSIIPNCEKIFLQQHSQTQTK*KDHFDY
Trigger: GTAATCAAAGTGGTCTTTGCATTTGGTTTGTGTTTG...GCTGTGCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACTTTTCCTTCAGCACTTaGAGTGGCTCCTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYFSFST*SGSWKY
Trigger: ATACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAA...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATGTCTTCATGTTCACTaGATTCTGGTGTTACTACTA +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALCLHVH*ILVLLL
Trigger: TAGTAGTAACACCAGAATCCAGTGAACATGAAGACA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTTTTCCCAGCCATATaGAAGCTCATTTTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALFFPAI*KLIFFA
Trigger: TGCAAAGAAAATGAGCTTCCATATGGCTGGGAAAAA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACCAATAGGAACAGACTaGAAAAGTTTGACAACATCT +
Preference number: 4 (lower is better)
Translates to: PLLCQSANEVMETGFKIRPIGTD*KSLTTS
Trigger: AGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGG...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTACCAATAGGAACAGACTaGAAAAGTTTGACAACATCT +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALPIGTD*KSLTTS
Trigger: AGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGG...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCCAATAGGAACAGACTaGAAAAGTTTGACAACATCT +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFPIGTD*KSLTTS
Trigger: AGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGG...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGCCAATAGGAACAGACTaGAAAAGTTTGACAACATCT +
Preference number: 4 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVPIGTD*KSLTTS
Trigger: AGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGG...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp AAGATGAACATCCAATTCCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTTCCACTACTTCTGTATaGCTCAGGTTCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: KMNIQFLIIWTRGIHSKTSTTSV*LRFCTF
Trigger: GAATGTACAGAACCTGAGCCATACAGAAGTAGTGGA...AGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGGAATTGGATGTTCATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCTTCTTCACGTTATTTTaGTTCTTCCATAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFFFTLF*FFHSCQ
Trigger: TTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAA...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAACATGGAAACATGTCATaGGTGAACGGTTCCGAATGT +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQHGNMS*VNGSEC
Trigger: ACATTCGGAACCGTTCACCCATGACATGTTTCCATG...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp CTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACACCATACCCAACATTTTaGGCCAAATCACTTCAACAT +
Preference number: 4 (lower is better)
Translates to: LLYFRVSIPNILGQITSTPYPTF*AKSLQH
Trigger: ATGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGG...TGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATTCATGGGAGGCACTATaGGTAATTGTTGCTAGTGCA +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNSWEAL*VIVASA
Trigger: TGCACTAGCAACAATTACCCATAGTGCCTCCCATGA...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAAAGCTTCTACCACACTTaGCACTGTTCCTATTTCCAT +
Preference number: 4 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQSFYHT*HCSYFH
Trigger: ATGGAAATAGGAACAGTGCCAAGTGTGGTAGAAGCT...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATACAATGGGCAGCTATTaGAAACCTTGTACAACAGCC +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNTMGSY*KPCTTA
Trigger: GGCTGTTGTACAAGGTTTCCAATAGCTGCCCATTGT...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTAGGACTAACACTCTCTaGTTTCAAGACTTAATAGAA +
Preference number: 4 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLRTNTL*FQDLIE
Trigger: TTCTATTAAGTCTTGAAACCAGAGAGTGTTAGTCCT...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CAA 72 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTCCAGTTTGTGATTGCT +
Preference number: 4 (lower is better)
Translates to: IILSQFQLAPCS*IFKAIFQFVIA
Trigger: AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAACTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQLHVAH*FIPLPF
Trigger: AAACGGAAGAGGAATAAATCAGTGAGCAACATGGAG...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGCAGACTGGAAAAGTTTaGCAACATCTGCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKQTGKV*QHLHEC
Trigger: ACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTG...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTCTCCATGTCCACAGTaGAATAATCAAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLSPCPQ*NNQNPG
Trigger: CCCAGGATTTTGATTATTTCACTGTGGACATGGAGA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGTTGCTCCGTGCAGTTTaGTTTTTAAGGCGATATTCC +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKLLRAV*FLRRYS
Trigger: GGAATATCGCCTTAAAAATCAAACTGCACGGAGCAA...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAGAGCTTATTTGCATTTaGACTCCTGTAAAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LLCQSANEVMETGFKIRQELICI*TPVKSK
Trigger: CTTACTCTTTACAGGAGTTCAAATGCAAATAAGCTC...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTTCCTTTGAGATAGTCTaGTGCATAAACAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCSFEIV*CINNVR
Trigger: CCTAACATTGTTTATGCATCAGACTATCTCAAAGGA...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR TCA 90 bp CTCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAAACTTGCATTTCAAACTaGGAGTTTCAGGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LKCPYTNEWTGKWSVSVQTCISN*EFQAVL
Trigger: CAAAACAGCCTGAAACTCTCAGTTTGAAATGCAAGT...TTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR TCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAATGTTTGGCTATCATATaGATTTCCCTTTTAGTACCG +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQCLAII*ISLLVP
Trigger: CGGTACTAAAAGGGAAATTCATATGATAGCCAAACA...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCTGGGGCATGTTATGTTaGTGTAGCTTCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLIWGMLC*CSFLFA
Trigger: AGCAAAAAGGAAGCTACAGCAACATAACATGCCCCA...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR GCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCATTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAFDEFY*SGMCHV
Trigger: GACATGACACATGCCAGAGCAATAGAACTCATCAAA...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACCATCCAAGTCCTTCATaGAGTGGGGAGGAATATTTT +
Preference number: 4 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYHPSPS*SGEEYF
Trigger: AAAATATTCCTCCCCACTGCATGAAGGACTTGGATG...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAATTTCAGCTTGCTCCGTaGAGTTTGATTTTTAAGGCG +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQFQLAP*SLIFKA
Trigger: CGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAA...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAATCTATGAGCTAAACTaGAAAATTCTGACTTATGGC +
Preference number: 4 (lower is better)
Translates to: LEIAFTSCKILHLRLSALIYELN*KILTYG
Trigger: GCCATAAGTCAGAATTTTGCAGTTTAGCTCATAGAT...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAATTGCTTTTACAAGCTaGAAGATCCTTCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAIAFTS*KILHLR
Trigger: CCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAAT...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATTGTCTTCATGTTCACTaGATTCTGGTGTTACTACTA +
Preference number: 4 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHCLHVH*ILVLLL
Trigger: TAGTAGTAACACCAGAATCCAGTGAACATGAAGACA...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGTCTTCAGGTTTAGTTaGCTTTGTGTCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQVFRFS*LCVIHL
Trigger: CAGATGGATGACACAAAGCCAACTAAACCTGAAGAC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATACCAATAGGAACAGACTaGAAAAGTTTGACAACATCT +
Preference number: 4 (lower is better)
Translates to: WREQKKEFTHIYFLGINIPIGTD*KSLTTS
Trigger: AGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGG...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAACCAATAGGAACAGACTaGAAAAGTTTGACAACATCT +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQPIGTD*KSLTTS
Trigger: AGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGG...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAATGCGTCCGATTTTATaGGGCACAGTTATAGTGGAT +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQMRPIL*GTVIVD
Trigger: ATCCACTATAACTGTGCCCCATAAAATCGGACGCAT...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCATGTTGATGATAGACTaGCCATTCACTGCTAGGATC +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLMLMID*PFTARI
Trigger: GATCCTAGCAGTGAATGGCCAGTCTATCATCAACAT...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAACAAGTGCAGGGAGGTaGAGCTTATTTGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQTSAGR*SLFAFE
Trigger: TTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGT...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CCA 90 bp TTGGGAGAATTCGGGATGATGGATGTTCTAAGGATTATGATGATTGTTGCACAAGTCTTACCTCCTCGATaGATAATCAAAGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: LGEFGMMDVLRIMMIVAQVLPPR*IIKEVS
Trigger: TGAAACTTCTTTGATTATCCATCGAGGAGGTAAGAC...TTGTGCAACAATCATCATAATCCTTAGAACATCCATCATCCCGAATTCTCCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CAA 72 bp TTCTCCTCCTGTCAAACAACTAAACTACTCCGATGTTaGATGAAAATTAAACTGCTACTCAGGATACTGCAA +
Preference number: 4 (lower is better)
Translates to: FSSCQTTKLLRC*MKIKLLLRILQ
Trigger: TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGAGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAATTTGAAATCGTAAGTTaGGGTAGTGACGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQFEIVS*GSDEGL
Trigger: AAGACCTTCGTCACTACCTCAACTTACGATTTCAAA...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR TCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTTGATTTCAATGATTTaGTCTCCTACCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLLISMI*SPTLIL
Trigger: GAGGATGAGGGTAGGAGATCAAATCATTGAAATCAA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp AATCAACTTAGAGCTCATTATTCAGGTCAGCAGTTAGATCTTGTTTTCCTAATCTTGATTTCAATGATTTaGTCTCCTACCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: NQLRAHYSGQQLDLVFLILISMI*SPTLIL
Trigger: GAGGATGAGGGTAGGAGATCAAATCATTGAAATCAA...GATTAGGAAAACAAGATCTAACTGCTGACCTGAATAATGAGCTCTAAGTTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR TCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATTATTCTTCTTACAGCTaGGCAATACTACTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNYSSYS*AILLLG
Trigger: ACCTAGGAGTAGTATTGCTCAGCTGTAAGAAGAATA...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR GCA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGAGGTTCTGTACATTCTaGTGGTTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKRFCTF*WLISTM
Trigger: CATTGTTGAGATCAACCAGCAGAATGTACAGAACCT...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTTTGATGAGTTCTATTaGTCTGGCATGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLFDEFY*SGMCHV
Trigger: GACATGACACATGCCAGAGCAATAGAACTCATCAAA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR GCA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAATAAGACAAATACTCTaGCTCTGCTCTGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQIRQIL*LCSVKV
Trigger: CACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR TCA 90 bp TCAAATGTCCATACACTAATGAATGGACAGGAAAATGGAGTGTATCTGTACAATTCTTTGTGTTATGGCTaGAAAGAAAAGAGATCACTC +
Preference number: 4 (lower is better)
Translates to: SNVHTLMNGQENGVYLYNSLCYG*KEKRSL
Trigger: GAGTGATCTCTTTTCTTTTCAGCCATAACACAAAGA...ATTGTACAGATACACTCCATTTTCCTGTCCATTCATTAGTGTATGGACATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
3UTR CAA 72 bp AGGGTAAATTCACAGCTAACACTACACAAATATTATTaGGAATGGGATTTAGATGATGTGCTGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: RVNSQLTLHKYY*EWDLDDVLSSQ
Trigger: CTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATATTTGTGTAGTGTTAGCTGTGAATTTACCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: SLGRAALCGLAERSLCSPVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPAEAPG*RTLGSL
Trigger: CAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGC...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCTGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: AACQNPAPSRAPARRRPCWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SLSEPGTFQGPGATAALRAEAPG*RTLGSL
Trigger: CAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGC...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS CCA 90 bp TGGAGCGAGGCCGTCGTCCAGGGAGACGCCTACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGAACTCCAGGGGGCGGGTTCGTCGTG +
Preference number: 5 (lower is better)
Translates to: WSEAVVQGDAYFRQT*GGGSGRTPGGGFVV
Trigger: CACGACGAACCCGCCCCCTGGAGTTCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTAGGCGTCTCCCTGGACGACGGCCTCGCTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGCCGGAGGGGGTCCTaGCAGTGTTTGATCACGGCC +
Preference number: 5 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGSRRGS*QCLITA
Trigger: GGCCGTGATCAAACACTGCAAGGACCCCCTCCGGCT...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CAA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: AACQNPAPSRAPARRRPCVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGTTGCAGCTGAAGTGGTaGAGGTGGTGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPLQLKW*RWCWLG
Trigger: GCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAA...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS CCA 90 bp TGGAGCGAGGCCGTCGTCCAGGGAGACGCCTACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGAACTCCAGGGGGCGGGTTCGTCATA +
Preference number: 5 (lower is better)
Translates to: WSEAVVQGDAYFRQT*GGGSGRTPGGGFVI
Trigger: TATGACGAACCCGCCCCCTGGAGTTCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTAGGCGTCTCCCTGGACGACGGCCTCGCTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
CDS-3UTR CAA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCCTCCTTATGTGGCCTaGTGGTGCATGGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAPPYVA*WCMAPC
Trigger: GCACGGTGCCATGCACCACAAGGCCACATAAGGAGG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CAA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLGRAALCGLAERSLCSPGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 5 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDARCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: AACQNPAPSRAPARRRPCGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGTCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: SLGRAALCGLAERSLCSPSSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCCTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGLPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLTSCSR*ISQVGP
Trigger: AGGCCCAACTTGGGATATCAAACGGGAACACGACGT...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS GCA 90 bp GCCTCCCTGCTGGGTCGCGCTGATAGTAAGACAAGTCATTCACGCTaGGCGACCTCTCCGGGGCAGCACGGGGGCGGATGGATTTGGGCC +
Preference number: 5 (lower is better)
Translates to: ASLLGRADSKTSHSR*ATSPGQHGGGWIWA
Trigger: GGCCCAAATCCATCCGCCCCCGTGCTGCCCCGGAGAGGTCGCGCAGCGTGAATGACTTGTCTTACTATCAGCGCGACCCAGCAGGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634996.1
CDS GCA 90 bp TGCGATGCCGCCCAAGCACACCGGACACGTGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCTCGTGGATTTCCGGCAGACCTGGGG +
Preference number: 5 (lower is better)
Translates to: CDAAQAHRTRGTSRR*SQALVPRGFPADLG
Trigger: CCCCAGGTCTGCCGGAAATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCTTGGGCGGCATCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS-3UTR CAA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCCGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: AACQNPAPSRAPARRRPCRLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGACTATTTTCGTGTCCTaGCAGCTGAAGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPTIFVS*QLKWLR
Trigger: CCTCAACCACTTCAGCTGCAAGGACACGAAAATAGT...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS GCA 90 bp CGGGGGTCTCGTTCACCTCCAGCAGCAGCTCCTCCGACACCAATTTaGTGCCGCTCTCATAGGCCACCTTGCCGGGCTTCACCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: RGSRSPPAAAPPTPI*CRSHRPPCRASPPP
Trigger: TGGGGGAGGTGAAGCCCGGCAAGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGGAGCTGCTGCTGGAGGTGAACGAGACCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR CAA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGCTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPLNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGCCGTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: CQNPAPSRAPARRRPCAPCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...CGGCGCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGACTATTTTCGTGTCCTaGCAGCTGAAGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: RGRAAHLLAAEAPGLRTLTIFVS*QLKWLR
Trigger: CCTCAACCACTTCAGCTGCAAGGACACGAAAATAGT...CAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGA +
Preference number: 5 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQVWFHI*PCFHFR
Trigger: TCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: GRAAHLLAAEAPGLRTLGRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...GCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS GCA 90 bp GGGTCTCGTTCACCTCCAGCAGCAGCTCCTCCGACACCAATTTGCTaGCGCTCTCATAGGCCACCTTGCCGGGCTTCACCTCCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: GSRSPPAAAPPTPIC*RSHRPPCRASPPPG
Trigger: ACCTGGGGGAGGTGAAGCCCGGCAAGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGGAGCTGCTGCTGGAGGTGAACGAGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR CAA 90 bp AGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCGCGAGGCACCTGCACTTTaGTCTTCATGTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: SLSEPGTFQGPGATAALREAPAL*SSCSLD
Trigger: ATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTC...GCGCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS GCA 90 bp GCAGCTCCTCCGACACCAATTTGCTGCCGCTCTCATAGGCCACCTTaGCGGGCTTCACCTCCCCCAGGTAGGGGAACTGTCCATTCTCGG +
Preference number: 5 (lower is better)
Translates to: AAPPTPICCRSHRPP*RASPPPGRGTVHSR
Trigger: CCGAGAATGGACAGTTCCCCTACCTGGGGGAGGTGAAGCCCGGCAAGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGGAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGCCTCGGCCGCGCGGCCCTCTGCGGACTCGCCGAGCGCTCCCTCTGCTCCCCGATAAGTGAAATCACATaGCTGACAAAGAAGCTATCC +
Preference number: 5 (lower is better)
Translates to: SLGRAALCGLAERSLCSPISEIT*LTKKLS
Trigger: GGATAGCTTCTTTGTCAGCAATGTGATTTCACTTAT...CGGGGAGCAGAGGGAGCGCTCGGCGAGTCCGCAGAGGGCCGCGCGGCCGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR CAA 90 bp CCGTGGCCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGAGGTGGAGCTTATTaGCATTTGAACTCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: PWPRGSSAGGRGAGFEDAGGGAY*HLNSCK
Trigger: TTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCC...AGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR CAA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGAGGACGCTGGGCAGCTaGTCAGAACCCGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMRTLGS*SEPGTF
Trigger: GAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCT...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCACGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 5 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPRCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 5 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR CAA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGGGTCCTTGCAGTGTTaGATCACGGCCAGCACGTCC +
Preference number: 5 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMGSLQC*ITASTS
Trigger: GGACGTGCTGGCCGTGATCAAACACTGCAAGGACCC...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CAA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDRLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CCGCGCGGCTCATCTGCTGGCGGCCGAGGCGCCGGGTTTGAGGACGCTGGGCAGATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: PRGSSAGGRGAGFEDAGQIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...CTGCCCAGCGTCCTCAAACCCGGCGCCTCGGCCGCCAGCAGATGAGCCGCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSRLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGTGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: TATQDTAITRRGNDQPREWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: LSGARSPRTLTDALKGPTWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: AMTAPIKIGCPGSSPPRIVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...AATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp GCAGCTTGTCAGAACCCGGCACCTTCCAGGGCCCCGGCGCGACGGCGGCCTTGCATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: AACQNPAPSRAPARRRPCIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...GCAAGGCCGCCGTCGCGCCGGGGCCCTGGAAGGTGCCGGGTTCTGACAAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTAGGACGCTGGGCAGCTaGTCAGAACCCGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPRTLGS*SEPGTF
Trigger: GAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCT...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGAGGACGCTGGGCAGCTaGTCAGAACCCGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSRTLGS*SEPGTF
Trigger: GAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCT...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS CCA 90 bp GCCGAAGCCCTGGGCACGTGCCGTCTAGCTGACCATCAGTTGGCATaGAGTGCAGAGAATGAGGCGGCCGATCTGTTATATCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: AEALGTCRLADHQLA*SAENEAADLLYLEL
Trigger: CAGTTCCAGATATAACAGATCGGCCGCCTCATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAGACGGCACGTGCCCAGGGCTTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS CCA 90 bp ATCCCGGGTGAAGAGTGGTTTTTCGAACAGCCAGGGCCTCCCTGCTaGGTCGCGCTGATAGTAAGACAAGTCATTCACGCTGCGCGACCT +
Preference number: 5 (lower is better)
Translates to: IPGEEWFFEQPGPPC*VALIVRQVIHAARP
Trigger: AGGTCGCGCAGCGTGAATGACTTGTCTTACTATCAGCGCGACCCAGCAGGGAGGCCCTGGCTGTTCGAAAAACCACTCTTCACCCGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634996.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCCTTGCTTGACACACTaGAGCCGGAGGGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISPCLTH*SRRGSL
Trigger: CAAGGACCCCCTCCGGCTCAAGTGTGTCAAGCAAGG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCCTCCTTATGTGGCCTaGTGGTGCATGGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISPPYVA*WCMAPC
Trigger: GCACGGTGCCATGCACCACAAGGCCACATAAGGAGG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR CAA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGGGTCTGGTTCCTCATaGTCTTCAGGTTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSGSGSS*SSGLVG
Trigger: GCCAACTAAACCTGAAGACAATGAGGAACCAGACCC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCAGAAGCCATAGACACATaGTCATCATGGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPEAIDT*SSWTGG
Trigger: ACCGCCCGTCCATGATGACAATGTGTCTATGGCTTC...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCACGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPRLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRCCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTTGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: YLSGARSPRTLTDALKGPWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSSSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAGGACGCTGGGCAGCTaGTCAGAACCCGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIRTLGS*SEPGTF
Trigger: GAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCT...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: KLLLRILQLQGEGMISPGAEAPG*RTLGSL
Trigger: CAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGC...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISRCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCCCTCCTTATGTGGCCTaGTGGTGCCTAGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRPPYVA*WCLELC
Trigger: ACAGAGCTCTAGGCACCACAAGGCCACATAAGGAGG...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CAAAATCCTGGGGTTGTCTGTAGTCCGACAGAGGGTACTGCCTGGTGTCGGGGGCCTCCTTATGTGGCCTaGTGGTGCCTAGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: QNPGVVCSPTEGTAWCRGPPYVA*WCLELC
Trigger: ACAGAGCTCTAGGCACCACAAGGCCACATAAGGAGG...CCCCCGACACCAGGCAGTACCCTCTGTCGGACTACAGACAACCCCAGGATTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS TCA 90 bp CTTTCCCTCTTCTTTGGATGGAGTGTGGACGAGGAATGGGGAGGATaGGAGGGACGGCTGGGCAGAGGTAGGAGAGCTTGGATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LSLFFGWSVDEEWGG*EGRLGRGRRAWMRL
Trigger: CAACCTCATCCAAGCTCTCCTACCTCTGCCCAGCCGTCCCTCTCATCCTCCCCATTCCTCGTCCACACTCCATCCAAAGAAGAGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000419488.5
CDS CCA 90 bp GGACGGGCGGTGGATACGTGCCGTCTAGCTGACCATCAGTTGGCATaGAGTGCAGAGAATGAGGCGGCCGATCTGTTATATCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: GRAVDTCRLADHQLA*SAENEAADLLYLEL
Trigger: CAGTTCCAGATATAACAGATCGGCCGCCTCATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAGACGGCACGTATCCACCGCCCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
CDS-3UTR CAA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYVLLAA*GYRSNC
Trigger: ACAATTACTACGGTACCCCAAAGCCGCCAGCAGAAC...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGCTCCCCGAGGCGCTGCTTCTTCTGGCCGCAGGCTGAAAGCTCCTTTGGTTTCGTTTTCCTTCAGCACTaGGAGTGGCTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: CSPRRCFFWPQAESSFGFVFLQH*EWLLEV
Trigger: TACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAAC...GAAACCAAAGGAGCTTTCAGCCTGCGGCCAGAAGAAGCAGCGCCTCGGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCAGGGTCTGGTTCCTCATaGTCTTCAGGTTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPGSGSS*SSGLVG
Trigger: GCCAACTAAACCTGAAGACAATGAGGAACCAGACCC...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCCGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRRLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCCGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDARLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 5 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSLRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGATGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATTGCAGCTGAAGTGGTaGAGGTGGTGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLLQLKW*RWCWLG
Trigger: GCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: QAESSFGFLTSCSRLISQVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: EITLLTKKLSISASLGRQVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYTSCSR*ISQVGP
Trigger: AGGCCCAACTTGGGATATCAAACGGGAACACGACGT...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAGGACGCTGGGCAGCTaGTCAGAACCCGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVRTLGS*SEPGTF
Trigger: GAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCT...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ITLLTKKLSISASLGRQKAEAPG*RTLGSL
Trigger: CAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGC...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHAEAPG*RTLGSL
Trigger: CAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGGGTCCTTGCAGTGTTaGATCACGGCCAGCACGTCC +
Preference number: 5 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWGSLQC*ITASTS
Trigger: GGACGTGCTGGCCGTGATCAAACACTGCAAGGACCC...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CAA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATACAATTCCTCCTTGCTaGACACACTTGAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDTIPPC*THLSRR
Trigger: CCTCCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGT...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTCTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSLNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCCTGGGTGGCACTTGTaGCCTACTTTCATAAATGGC +
Preference number: 5 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMPGWHL*PTFING
Trigger: GCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGG...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CAA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: ASWIYACDSENKLKRRETVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCATCAAAATCCTGGGGTaGTCTGTAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAIKILG*SVVRQR
Trigger: CCTCTGTCGGACTACAGACAACCCCAGGATTTTGAT...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GAGCTGTGGTGGGTGGATACAGAGCCTGGACTTCTCCCGTTCTCTGGGCAGGGCCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: ELWWVDTEPGLLPFSGQGRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...GCCCTGCCCAGAGAACGGGAGAAGTCCAGGCTCTGTATCCACCCACCACAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS GCA 90 bp GCAGGTTCTGCGGTATGGCCGGAGCAGATAAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGTCCATTATCTGGTGGCTCCTACCCA +
Preference number: 5 (lower is better)
Translates to: AGSAVWPEQINSFED*LDSPIGPLSGGSYP
Trigger: TGGGTAGGAGCCACCAGATAATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTTTATCTGCTCCGGCCATACCGCAGAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524316.5
CDS-3UTR CAA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCTTCTTTTTCAAGCTTTaGGACATGGCAGTGGGGCGA +
Preference number: 5 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRFFFKL*DMAVGR
Trigger: TCGCCCCACTGCCATGTCCAAAAGCTTGAAAAAGAA...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CAA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGTTCTTTTTCAAGCTTTaGGACATGGCAGTGGGGCGA +
Preference number: 5 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMFFFKL*DMAVGR
Trigger: TCGCCCCACTGCCATGTCCAAAAGCTTGAAAAAGAA...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CAA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAAGCCGGAGGGGGTCCTaGCAGTGTTTGATCACGGCC +
Preference number: 5 (lower is better)
Translates to: RVSHGNMSWVNGSECVKESRRGS*QCLITA
Trigger: GGCCGTGATCAAACACTGCAAGGACCCCCTCCGGCT...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCCTTGCTTGACACACTaGAGCCGGAGGGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPPCLTH*SRRGSL
Trigger: CAAGGACCCCCTCCGGCTCAAGTGTGTCAAGCAAGG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR CAA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCATCAACAATTCCTCCTaGCTTGACACACTTGAGCCG +
Preference number: 5 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAINNSS*LDTLEP
Trigger: CGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGAT...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGATCAACAATTCCTCCTaGCTTGACACACTTGAGCCG +
Preference number: 5 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMINNSS*LDTLEP
Trigger: CGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGAT...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CAA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGCCTCCTTATGTGGCCTaGTGGTGCATGGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: TATQDTAITRRGNDQPREPPYVA*WCMAPC
Trigger: GCACGGTGCCATGCACCACAAGGCCACATAAGGAGG...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACAGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LSGARSPRTLTDALKGPTGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp CATGTGCCTGTAGTCCTACCTACTGGAGAAGCTGAGGTGAAGGATCACTTGAGCGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: HVPVVLPTGEAEVKDHLSVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...GCTCAAGTGATCCTTCACCTCAGCTTCTCCAGTAGGTAGGACTACAGGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGCGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSRLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATCCTGGGTGGCACTTGTaGCCTACTTTCATAAATGGC +
Preference number: 5 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDPGWHL*PTFING
Trigger: GCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGG...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CAA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: EITLLTKKLSISASLGRQRLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLCCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATATGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: RCSQALVPRGSMRVTVKICCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGTGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLCCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACTGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: ACDSENKLKRRETEPKKNWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCTTGCAGCTGAAGTGGTaGAGGTGGTGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERLQLKW*RWCWLG
Trigger: GCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAA...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLAEAPG*RTLGSL
Trigger: CAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGC...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTGGAGGTGGAGCTTATTaGCATTTGAACTCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: RTRGTSRRCSQALVPRGSGGGAY*HLNSCK
Trigger: TTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCC...AGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATTATGGGGACCCATGCTaGTCACTTTTCATGCACATG +
Preference number: 5 (lower is better)
Translates to: DTWDFTSMLPGLGASWIYYGDPC*SLFMHM
Trigger: CATGTGCATGAAAAGTGACAAGCATGGGTCCCCATA...ATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS TCA 90 bp CTGACTGTACACTGGTGCAGGATAAGGCTGGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTCTTCATGTTCACTGGATTCTGGTGT +
Preference number: 5 (lower is better)
Translates to: LTVHWCRIRLGGHLP*GTCTFVFMFTGFWC
Trigger: ACACCAGAATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCCCAGCCTTATCCTGCACCAGTGTACAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636717.1
ENST00000637441.1
ENST00000637486.1
CDS CCA 90 bp TCCATTGACCATCACTGGAGGTGGCCTCTCCATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGGGTCTTCAGGATCAAAGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: SIDHHWRWPLHYCKG*HHAVSRVFRIKGQR
Trigger: CCTTTGCCCTTTGATCCTGAAGACCCTGCTAACAGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS-3UTR CAA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGCCTTGCTTGACACACTaGAGCCGGAGGGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: KLLLRILQLQGEGMISPGPCLTH*SRRGSL
Trigger: CAAGGACCCCCTCCGGCTCAAGTGTGTCAAGCAAGG...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAACAATTCCTCCTTGCTaGACACACTTGAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLTIPPC*THLSRR
Trigger: CCTCCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGT...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTGTTTTCCTTCAGCACTaGGAGTGGCTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISVFLQH*EWLLEV
Trigger: TACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAAC...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCCTGGCTTTCTCCATGTaGCTCACTGATTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDALAFSM*LTDLFL
Trigger: GAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAG...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATGAGGCACCTGCACTTTaGTCTTCATGTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDEAPAL*SSCSLD
Trigger: ATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTC...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCAGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: TATQDTAITRRGNDQPREVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAGAAGCCATAGACACATaGTCATCATGGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIEAIDT*SSWTGG
Trigger: ACCGCCCGTCCATGATGACAATGTGTCTATGGCTTC...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGAAGCCATAGACACATaGTCATCATGGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEEAIDT*SSWTGG
Trigger: ACCGCCCGTCCATGATGACAATGTGTCTATGGCTTC...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDACTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHRLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRERLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISLPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGATGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: PLLCQSANEVMETGFKIRWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGTTGCAGCTGAAGTGGTaGAGGTGGTGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KLLLRILQLQGEGMISPGLQLKW*RWCWLG
Trigger: GCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAA...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTTTGCAGCTGAAGTGGTaGAGGTGGTGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: YLSGARSPRTLTDALKGPLQLKW*RWCWLG
Trigger: GCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAA...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATCTGAATCCAAATCCTTaGGCTCCTTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDLNPNP*APFSMS
Trigger: GGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAG...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS GCA 90 bp CCAGCCAAAAGGGAACAGATCCCTTTGGGAAATGGCATCCTCCAATaGCAGATCCCAGTGCCAAAGGGCAGGTTTCTCTCGCCAAATACA +
Preference number: 5 (lower is better)
Translates to: PAKREQIPLGNGILQ*QIPVPKGRFLSPNT
Trigger: TGTATTTGGCGAGAGAAACCTGCCCTTTGGCACTGGGATCTGGCATTGGAGGATGCCATTTCCCAAAGGGATCTGTTCCCTTTTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 90 bp CTGTTCCTATGGACCAGCCAAAAGGGAACAGATCCCTTTGGGAAATaGCATCCTCCAATGCCAGATCCCAGTGCCAAAGGGCAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LFLWTSQKGTDPFGK*HPPMPDPSAKGQVS
Trigger: AGAAACCTGCCCTTTGGCACTGGGATCTGGCATTGGAGGATGCCATTTCCCAAAGGGATCTGTTCCCTTTTGGCTGGTCCATAGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS-3UTR CAA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGACACTCTCATGGACTTaGCTAGTCCAGTGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSTLSWT*LVQWLF
Trigger: GAAAAGCCACTGGACTAGCAAAGTCCATGAGAGTGT...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CAA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAAGCCGGAGGGGGTCCTaGCAGTGTTTGATCACGGCC +
Preference number: 5 (lower is better)
Translates to: TLPLLCQSANEVMETGFKSRRGS*QCLITA
Trigger: GGCCGTGATCAAACACTGCAAGGACCCCCTCCGGCT...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCACAATTCCTCCTTGCTaGACACACTTGAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVTIPPC*THLSRR
Trigger: CCTCCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGT...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp ATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTATCAACAATTCCTCCTaGCTTGACACACTTGAGCCG +
Preference number: 5 (lower is better)
Translates to: ISPGRLLRVTFEMDLIAPINNSS*LDTLEP
Trigger: CGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGAT...AGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGTTTTCCTTCAGCACTaGGAGTGGCTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLVFLQH*EWLLEV
Trigger: TACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAAC...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAGTTTTCCTTCAGCACTaGGAGTGGCTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRVFLQH*EWLLEV
Trigger: TACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAAC...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGGTCTGGTTCCTCATaGTCTTCAGGTTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLGSGSS*SSGLVG
Trigger: GCCAACTAAACCTGAAGACAATGAGGAACCAGACCC...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAGGGTCTGGTTCCTCATaGTCTTCAGGTTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRGSGSS*SSGLVG
Trigger: GCCAACTAAACCTGAAGACAATGAGGAACCAGACCC...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAGTCATCCTGCAGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: KSSCRRQGTLLLTPRMDAGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...GGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCTGCAGGATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGACTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRLADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: RCSQALVPRGSMRVTVKILADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCCTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SSNQNRLSRLISPEDSEALPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...GGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISLRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGATTGCAGCTGAAGTGGTaGAGGTGGTGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGLQLKW*RWCWLG
Trigger: GCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAA...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGTTGCAGCTGAAGTGGTaGAGGTGGTGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLLQLKW*RWCWLG
Trigger: GCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAA...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTACTATTTTCGTGTCCTaGCAGCTGAAGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISTIFVS*QLKWLR
Trigger: CCTCAACCACTTCAGCTGCAAGGACACGAAAATAGT...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: SSHTHRCPERSYISYFKHVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTCTGAATCCAAATCCTTaGGCTCCTTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISLNPNP*APFSMS
Trigger: GGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAG...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGATCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRSSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLSSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVTSCSR*ISQVGP
Trigger: AGGCCCAACTTGGGATATCAAACGGGAACACGACGT...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 5 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHRCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCCTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 5 (lower is better)
Translates to: CQSPHKGTGGFRISLGLRLAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...GCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGCCGAGGTGGGGCTGTaGAGCTTTATAGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERAEVGL*SFIVDP
Trigger: TGGATCCACTATAAAGCTCAACAGCCCCACCTCGGC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS TCA 90 bp GCCTTGTGGTGCATGGCACCGTGCGGAGGTAGAGGTTGTCACGAATaGTTTGCTGAAGCTCATGGTCCACAGAACCCTTTTGAAATCGTA +
Preference number: 5 (lower is better)
Translates to: ALWCMAPCGGRGCHE*FAEAHGPQNPFEIV
Trigger: TACGATTTCAAAAGGGTTCTGTGGACCATGAGCTTCAGCAAATCATTCGTGACAACCTCTACCTCCGCACGGTGCCATGCACCACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS TCA 90 bp TTGATCTCAACAATGAGGTCGCCTTCACACAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTCACCCGCTGTCCTGTAGGACTGTCG +
Preference number: 5 (lower is better)
Translates to: LISTMRSPSHRPGHP*MSSICFTRCPVGLS
Trigger: CGACAGTCCTACAGGACAGCGGGTGAAACAAATACTTGACATTCAGGGATGCCCTGGCCTGTGTGAAGGCGACCTCATTGTTGAGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS GCA 90 bp GTTGTGTCTTCCATTGACCATCACTGGAGGTGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCTGTTAGCAGGGTCTTCAGGATCAAA +
Preference number: 5 (lower is better)
Translates to: VVSSIDHHWRWPLHY*KGWHHAVSRVFRIK
Trigger: TTTGATCCTGAAGACCCTGCTAACAGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGAAGACACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS-3UTR CAA 90 bp AGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGATCGCCCCTTTTACACTCTCATGGACTTaGCTAGTCCAGTGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SPGRLLRVTFEMDLIAPFTLSWT*LVQWLF
Trigger: GAAAAGCCACTGGACTAGCAAAGTCCATGAGAGTGT...AAAAGGGGCGATCAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGTTGTCACGAATGATTaGCTGAAGCTCATGGTCCAC +
Preference number: 5 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEVVTND*LKLMVH
Trigger: GTGGACCATGAGCTTCAGCAAATCATTCGTGACAAC...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522391.3
CDS-3UTR CAA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERVLLAA*GYRSNC
Trigger: ACAATTACTACGGTACCCCAAAGCCGCCAGCAGAAC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGAGGCACCTGCACTTTaGTCTTCATGTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLEAPAL*SSCSLD
Trigger: ATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTC...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAGAGGCACCTGCACTTTaGTCTTCATGTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIEAPAL*SSCSLD
Trigger: ATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTC...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: CKILHLRLSALFSSCQTTGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: ASWIYACDSENKLKRRETVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: KLSISASLGRQKSLFIKEVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: EITLLTKKLSISASLGRQGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLRLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CAGGCTGAAAGCTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAATGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: QAESSFGFLTSCSRLISQCCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...TTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAGCTTTCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 5 (lower is better)
Translates to: RCSQALVPRGSMRVTVKILRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAACTATTTTCGTGTCCTaGCAGCTGAAGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLTIFVS*QLKWLR
Trigger: CCTCAACCACTTCAGCTGCAAGGACACGAAAATAGT...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGGATGGATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: RMDAKGEPWKHVMGERFRVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...TCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCATCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GAGGGAATGATCAGCCCAGGGAGGCTATTACGTGTGACCTTTGAGATGGACCTGGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: EGMISPGRLLRVTFEMDLVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...CAGGTCCATCTCAAAGGTCACACGTAATAGCCTCCCTGGGCTGATCATTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATAGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: RCSQALVPRGSMRVTVKIVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGTCCCCTCCTGGGGGTaGCCTGTAATCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISVPSWG*PVIQRG
Trigger: CCCCCGCTGGATTACAGGCAACCCCCAGGAGGGGAC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACTGAATCCAAATCCTTaGGCTCCTTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: RCSQALVPRGSMRVTVKILNPNP*APFSMS
Trigger: GGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTACTGAATCCAAATCCTTaGGCTCCTTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLLNPNP*APFSMS
Trigger: GGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAG...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGGTCGCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: CSRLISQVGPGLIWWEGSRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...CGACCCTTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGCCGAGGCGCCGGGTTaGAGGACGCTGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAAEAPG*RTLGSL
Trigger: CAAGCTGCCCAGCGTCCTCAAACCCGGCGCCTCGGC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 5 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKERCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGGCCTTCAGAAACACTTaGCCTTTTAATATGTGTAGC +
Preference number: 5 (lower is better)
Translates to: TRGTSRRCSQALVPRGSMAFRNT*PFNMCS
Trigger: GCTACACATATTAAAAGGCAAAGTGTTTCTGAAGGC...CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AGGAGGCAGGGAACGCTGCTGCTAACACCGAGGATGGATGCCAAGGGTGAGCCACAAGTGTTTGTGCTTTaGTTTACGATGAATGGGTTT +
Preference number: 5 (lower is better)
Translates to: RRQGTLLLTPRMDAKGEPQVFVL*FTMNGF
Trigger: AAACCCATTCATCGTAAACAAAAGCACAAACACTTG...TGGCTCACCCTTGGCATCCATCCTCGGTGTTAGCAGCAGCGTTCCCTGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTATATGGGGACCCATGCTaGTCACTTTTCATGCACATG +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLYGDPC*SLFMHM
Trigger: CATGTGCATGAAAAGTGACAAGCATGGGTCCCCATA...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS TCA 90 bp ACAGTCTTGAGACCGGTCTATATTGGGAATGGCTTGCACTTCCACTaGTGGACCCATCAAGCAGGTATGCGTTTTCTCATTGGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TVLRPVYIGNGLHFH*WTHQAGMRFLIGLV
Trigger: CACCAGGCCAATGAGAAAACGCATACCTGCTTGATGGGTCCATCAGTGGAAGTGCAAGCCATTCCCAATATAGACCGGTCTCAAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 90 bp CCAAGGCAAACAGGTGTTCTCCAGAAGCTGGAAAGGCAAGGAAACTaGTTCTCCTCTGGAGCTTTCACAAAGCTACATGGCCCTGTCAAC +
Preference number: 5 (lower is better)
Translates to: PRQTGVLQKLERQGN*FSSGAFTKLHGPVN
Trigger: GTTGACAGGGCCATGTAGCTTTGTGAAAGCTCCAGAGGAGAATCAGTTTCCTTGCCTTTCCAGCTTCTGGAGAACACCTGTTTGCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 90 bp CCATGCCTATTATTGCCCCTGAAGACCTTCCAGTGGGACAAGATGTaGAGGTGGAAGACAGTGATACTGATGATCCTGACCCTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: PCLLLPLKTFQWDKM*RWKTVILMILTLCR
Trigger: CCTACACAGGGTCAGGATCATCAGTATCACTGTCTTCCACCTTCACATCTTGTCCCACTGGAAGGTCTTCAGGGGCAATAATAGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS GCA 90 bp AACAGATCCCTTTGGGAAATGGCATCCTCCAATGCCAGATCCCAGTaGCAAAGGGCAGGTTTCTCTCGCCAAATACATGCCCCTTGTTTA +
Preference number: 5 (lower is better)
Translates to: NRSLWEMASSNARSQ*QRAGFSRQIHAPCL
Trigger: TAAACAAGGGGCATGTATTTGGCGAGAGAAACCTGCCCTTTGGCACTGGGATCTGGCATTGGAGGATGCCATTTCCCAAAGGGATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 90 bp AAGCCCTGGGCACCTTTCACAATGGTTAAGGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCCATAGACACATTGTCATCATGGACG +
Preference number: 5 (lower is better)
Translates to: KPWAPFTMVKVISSA*VAPDEAIDTLSSWT
Trigger: CGTCCATGATGACAATGTGTCTATGGCTTCATCTGGGGCCACCCAAGCTGAACTTATGACCTTAACCATTGTGAAAGGTGCCCAGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
CDS CCA 90 bp AATCTTTCTGTTCCTATGGACCAGCCAAAAGGGAACAGATCCCTTTaGGAAATGGCATCCTCCAATGCCAGATCCCAGTGCCAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: NLSVPMDQPKGNRSL*EMASSNARSQCQRA
Trigger: TGCCCTTTGGCACTGGGATCTGGCATTGGAGGATGCCATTTCCCAAAGGGATCTGTTCCCTTTTGGCTGGTCCATAGGAACAGAAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 90 bp AATGTAGGGCTATATTTTGCTGTGATGCTAGGTCCCATTGTGTCGTaGCTAAGCTCCCACACAAGCTTGTCCCCAAGCATCACAGCAGAG +
Preference number: 5 (lower is better)
Translates to: NVGLYFAVMLGPIVS*LSSHTSLSPSITAE
Trigger: CTCTGCTGTGATGCTTGGGGACAAGCTTGTGTGGGAGCTTAGCCACGACACAATGGGACCTAGCATCACAGCAAAATATAGCCCTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTACTGGCTTTCTCCATGTaGCTCACTGATTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLLAFSM*LTDLFL
Trigger: GAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAG...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CGATGCTCCCAGGCCTTGGTGCCTCGTGGATCTATGCGTGTGACAGTGAAAATACTGGCTTTCTCCATGTaGCTCACTGATTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: RCSQALVPRGSMRVTVKILAFSM*LTDLFL
Trigger: GAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAG...TATTTTCACTGTCACACGCATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: SPRTLTDALKGPTFHILNGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACACTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: LSGARSPRTLTDALKGPTLADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GGTCCTGGGTGGCACTTGTTGCCTACTTTCATAAATGGCCCTAGATTTCTCGTACGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: GPGWHLLPTFINGPRFLVRLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...TACGAGAAATCTAGGGCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: SSHTHRCPERSYISYFKHRLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVRLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKCCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAATGGGCGATGGGGCTGTaGGGGGTGGCTGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQWAMGL*GVAGLG
Trigger: GCCAAGCCCAGCCACCCCCAACAGCCCCATCGCCCA...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATGCCAAGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCACTATTTTCGTGTCCTaGCAGCTGAAGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: MPRVSHGNMSWVNGSECVTIFVS*QLKWLR
Trigger: CCTCAACCACTTCAGCTGCAAGGACACGAAAATAGT...GACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGTCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: TATQDTAITRRGNDQPRESSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTGGAGGTGGAGCTTATTaGCATTTGAACTCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISGGGAY*HLNSCK
Trigger: TTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCC...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CTCCTTTGGTTTCCTAACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGTATGGGGACCCATGCTaGTCACTTTTCATGCACATG +
Preference number: 5 (lower is better)
Translates to: LLWFPNVVFPFDIPSWAWYGDPC*SLFMHM
Trigger: CATGTGCATGAAAAGTGACAAGCATGGGTCCCCATA...CCAGGCCCAACTTGGGATATCAAACGGGAACACGACGTTAGGAAACCAAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS TCA 90 bp TTCCTCCTCAGGAGGCTCTATACTGGCTTTCTCCATGTTGCTCACTaGTTTATTCCTCTTCCGTTTTCCTTCAGCACTTGGAGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: FLLRRLYTGFLHVAH*FIPLPFSFSTWSGS
Trigger: GGAGCCACTCCAAGTGCTGAAGGAAAACGGAAGAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTGAGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000635863.1
ENST00000636717.1
ENST00000637441.1
ENST00000637486.1
ENST00000637728.1
CDS TCA 90 bp GCCTGGGAAGAAGGCCGCTGCTGGACATTAAAGAAACCAGAAGAGTaGGGAATCTTGAGGGACTGGAGTGACAAACATAGATGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: AWEEGRCWTLKKPEE*GILRDWSDKHRCER
Trigger: TCTCTCACATCTATGTTTGTCACTCCAGTCCCTCAAGATTCCTCACTCTTCTGGTTTCTTTAATGTCCAGCAGCGGCCTTCTTCCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS CCA 90 bp AAGAGTAGAGTCCCACACAAACATGGTAGGATAGGGTTTGTCCTGTaGATCAAATTCAGCCCGCCCCAATTTTTGTGTGGCCAATGGGCT +
Preference number: 5 (lower is better)
Translates to: KSRVPHKHGRIGFVL*IKFSPPQFLCGQWA
Trigger: AGCCCATTGGCCACACAAAAATTGGGGCGGGCTGAATTTGATCCACAGGACAAACCCTATCCTACCATGTTTGTGTGGGACTCTACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS CCA 90 bp GAAGCAGCGTGGTCTAGAAGGTCTAAGATTCTCAAAAGGGAACCCTaGAGAGGTGAAGGAAGAATTTGCAGCTGCTCTTGTTGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: EAAWSRRSKILKREP*RGEGRICSCSCCVW
Trigger: CCAGACACAACAAGAGCAGCTGCAAATTCTTCCTTCACCTCTCCAGGGTTCCCTTTTGAGAATCTTAGACCTTCTAGACCACGCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS-3UTR CAA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAGGGTCCTTGCAGTGTTaGATCACGGCCAGCACGTCC +
Preference number: 5 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRGSLQC*ITASTS
Trigger: GGACGTGCTGGCCGTGATCAAACACTGCAAGGACCC...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACCTTGCTTGACACACTaGAGCCGGAGGGGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PLLCQSANEVMETGFKIRPCLTH*SRRGSL
Trigger: CAAGGACCCCCTCCGGCTCAAGTGTGTCAAGCAAGG...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGACAATTCCTCCTTGCTaGACACACTTGAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKTIPPC*THLSRR
Trigger: CCTCCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGT...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS-3UTR CAA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCCTCCTTATGTGGCCTaGTGGTGCATGGCACCGTGC +
Preference number: 5 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFPPYVA*WCMAPC
Trigger: GCACGGTGCCATGCACCACAAGGCCACATAAGGAGG...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHVLLAA*GYRSNC
Trigger: ACAATTACTACGGTACCCCAAAGCCGCCAGCAGAAC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGGTTTTCCTTCAGCACTaGGAGTGGCTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: EITLLTKKLSISASLGRQVFLQH*EWLLEV
Trigger: TACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAAC...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCAATGACAGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGGCTTTCTCCATGTaGCTCACTGATTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: AMTAPIKIGCPGSSPPRILAFSM*LTDLFL
Trigger: GAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAG...AATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCTGTCATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAAGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAACTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: RVSHGNMSWVNGSECVKELADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGCGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLRLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCCTGGGTGGCACTTGTaGCCTACTTTCATAAATGGC +
Preference number: 5 (lower is better)
Translates to: EITLLTKKLSISASLGRQPGWHL*PTFING
Trigger: GCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000628980.2
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISRLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 5 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPLRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTGCAGCTGAAGTGGTaGAGGTGGTGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LEIAFTSCKILHLRLSALLQLKW*RWCWLG
Trigger: GCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGA +
Preference number: 5 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPVWFHI*PCFHFR
Trigger: TCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGAGGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGA +
Preference number: 5 (lower is better)
Translates to: TATQDTAITRRGNDQPREVWFHI*PCFHFR
Trigger: TCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC...CTCCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACACTGAATCCAAATCCTTaGGCTCCTTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: LSGARSPRTLTDALKGPTLNPNP*APFSMS
Trigger: GGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAG...TGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GGTCCTGGGTGGCACTTGTTGCCTACTTTCATAAATGGCCCTAGATTTCTCGTATCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GPGWHLLPTFINGPRFLVSSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...TACGAGAAATCTAGGGCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRETSCSR*ISQVGP
Trigger: AGGCCCAACTTGGGATATCAAACGGGAACACGACGT...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGAGGACGCTGGGCAGCTaGTCAGAACCCGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: KPLHKGTAALPILIKQIVRTLGS*SEPGTF
Trigger: GAAGGTGCCGGGTTCTGACAAGCTGCCCAGCGTCCT...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 5 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFRCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTACTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 5 (lower is better)
Translates to: FHSCQSPHKGTGGFRISLLAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...TAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTGCCTTCAGAAACACTTaGCCTTTTAATATGTGTAGC +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISAFRNT*PFNMCS
Trigger: GCTACACATATTAAAAGGCAAAGTGTTTCTGAAGGC...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTTAGGTCTGCGCGTTGATTACACTACAGAAGCATaGTCCAAAACCAGATTCAAT +
Preference number: 5 (lower is better)
Translates to: SPHKGTGGFRISLGLRVDYTTEA*SKTRFN
Trigger: ATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTA...ATCAACGCGCAGACCTAAACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCAAATCCAGACCACTCAGCTGTTTaGGATACACTAGAGCTATGC +
Preference number: 5 (lower is better)
Translates to: IKIGCPGSSPPRILKPNPDHSAV*DTLELC
Trigger: GCATAGCTCTAGTGTATCCAAAACAGCTGAGTGGTC...TGGATTTGGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACGATGCTCCCAGGCCTaGGTGCCTCGTGGATTTCCG +
Preference number: 5 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIRCSQA*VPRGFP
Trigger: CGGAAATCCACGAGGCACCAAGGCCTGGGAGCATCG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS-3UTR CAA 90 bp GCCAGAACTTCAGCCCTCACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGTTTAGTGAGCAGATGTaGGGCTACAACACTACCACT +
Preference number: 5 (lower is better)
Translates to: ARTSALTLFCNFLPRSWEFSEQM*GYNTTT
Trigger: AGTGGTAGTGTTGTAGCCCAACATCTGCTCACTAAA...CTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGTGAGGGCTGAAGTTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp GCCAGAACTTCAGCCCTCACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGAACAATGGGCAGCTATaGGAAACCTTGTACAACAGC +
Preference number: 5 (lower is better)
Translates to: ARTSALTLFCNFLPRSWENNGQL*ETLYNS
Trigger: GCTGTTGTACAAGGTTTCCAATAGCTGCCCATTGTT...CTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGTGAGGGCTGAAGTTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS TCA 90 bp CATTGTACTCACATGGCACCGTGCGGAGGTAGAGGTTGTCACGAATaGTTTGCTGAAGCTCATGGTCCACAGAACCCTTTTGAAATCGTA +
Preference number: 5 (lower is better)
Translates to: HCTHMAPCGGRGCHE*FAEAHGPQNPFEIV
Trigger: TACGATTTCAAAAGGGTTCTGTGGACCATGAGCTTCAGCAAATCATTCGTGACAACCTCTACCTCCGCACGGTGCCATGTGAGTACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628997.1
CDS GCA 90 bp CTTCCTCTTCCTCCTCAGGAGGCTCTATACTGGCTTTCTCCATGTTaGTCACTGATTTATTCCTCTTCCGTTTTCCTTCAGCACTTGGAG +
Preference number: 5 (lower is better)
Translates to: LPLPPQEALYWLSPC*SLIYSSSVFLQHLE
Trigger: CTCCAAGTGCTGAAGGAAAACGGAAGAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTGAGGAGGAAGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000635863.1
ENST00000636717.1
ENST00000637441.1
ENST00000637486.1
ENST00000637728.1
CDS GCA 90 bp ATGCTGCAGCTTCAAAGTATTGGCCTAGAGCCAAGAAAGTGGATATaGCCCAGAGTCTTGGGTCAGGCTAAATCTCTAAGTAGGGGTAGA +
Preference number: 5 (lower is better)
Translates to: MLQLQSIGLEPRKWI*PRVLGQAKSLSRGR
Trigger: TCTACCCCTACTTAGAGATTTAGCCTGACCCAAGACTCTGGGGCATATCCACTTTCTTGGCTCTAGGCCAATACTTTGAAGCTGCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS GCA 90 bp ATCTGCATTACTGTCCTGATGCTGCAGAAATGTAGGGCTATATTTTaGTGTGATGCTAGGTCCCATTGTGTCGTGGCTAAGCTCCCACAC +
Preference number: 5 (lower is better)
Translates to: ICITVLMLQKCRAIF*CDARSHCVVAKLPH
Trigger: GTGTGGGAGCTTAGCCACGACACAATGGGACCTAGCATCACAGCAAAATATAGCCCTACATTTCTGCAGCATCAGGACAGTAATGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 90 bp CAAATATGTTTCATAGTTGTGTCTTCCATTGACCATCACTGGAGGTaGCCTCTCCATTATTGCAAGGGGTGGCACCATGCTGTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: QICFIVVSSIDHHWR*PLHYCKGWHHAVSR
Trigger: CCTGCTAACAGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGAAGACACAACTATGAAACATATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS CCA 90 bp TCCTCTCTTTGTACTCTTGACAGAGGGCTGATCCTGAACAAGGTGTaGCATAGAGGAAAGACTAGTGGTGAGAGTCAAGAGATACGGTAC +
Preference number: 5 (lower is better)
Translates to: SSLCTLDRGLILNKV*HRGKTSGESQEIRY
Trigger: GTACCGTATCTCTTGACTCTCACCACTAGTCTTTCCTCTATGCCACACCTTGTTCAGGATCAGCCCTCTGTCAAGAGTACAAAGAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 90 bp CTCCGCACCTGGCTAGGAACATGTTTCTCAGTCTTCTTTGAAATCTaGTGTCTGGTGAATGTGAAGAATGTGAAGAACACGAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LRTWLGTCFSVFFEI*CLVNVKNVKNTKAG
Trigger: CCCTGCCTTCGTGTTCTTCACATTCTTCACATTCACCAGACACCAGATTTCAAAGAAGACTGAGAAACATGTTCCTAGCCAGGTGCGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635863.1
ENST00000637728.1
CDS-3UTR CAA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAAGGTTGTGCTGTCCCTaGAATGACACTCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRERLCCP*NDTQGC
Trigger: ACAGCCTTGAGTGTCATTCAAGGGACAGCACAACCT...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354212.9
CDS-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGAGAGCTTGGATGAGGTaGTGCTGTCCCTTGAATGAC +
Preference number: 5 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKRAWMR*CCPLND
Trigger: GTCATTCAAGGGACAGCACAACCTCATCCAAGCTCT...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354212.9
CDS-3UTR CAA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGACACTCTCATGGACTTaGCTAGTCCAGTGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: KLLLRILQLQGEGMISPGTLSWT*LVQWLF
Trigger: GAAAAGCCACTGGACTAGCAAAGTCCATGAGAGTGT...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGACACTCTCATGGACTTaGCTAGTCCAGTGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: EITLLTKKLSISASLGRQTLSWT*LVQWLF
Trigger: GAAAAGCCACTGGACTAGCAAAGTCCATGAGAGTGT...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGGGGTCCTTGCAGTGTTaGATCACGGCCAGCACGTCC +
Preference number: 5 (lower is better)
Translates to: KPLHKGTAALPILIKQIVGSLQC*ITASTS
Trigger: GGACGTGCTGGCCGTGATCAAACACTGCAAGGACCC...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAAGCCGGAGGGGGTCCTaGCAGTGTTTGATCACGGCC +
Preference number: 5 (lower is better)
Translates to: CSYTTEALSKTRFNKLMASRRGS*QCLITA
Trigger: GGCCGTGATCAAACACTGCAAGGACCCCCTCCGGCT...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp AGCTGTTTTGGATACACTAGAGCTATGCTGTCAGTAGTGTCTATAATGGGCTGCGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: SCFGYTRAMLSVVSIMGCVLLAA*GYRSNC
Trigger: ACAATTACTACGGTACCCCAAAGCCGCCAGCAGAAC...GCAGCCCATTATAGACACTACTGACAGCATAGCTCTAGTGTATCCAAAACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGTTTTCCTTCAGCACTaGGAGTGGCTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: ASWIYACDSENKLKRRETVFLQH*EWLLEV
Trigger: TACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAAC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGTTTTCCTTCAGCACTaGGAGTGGCTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHVFLQH*EWLLEV
Trigger: TACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAAC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGGGTCTGGTTCCTCATaGTCTTCAGGTTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: ASWIYACDSENKLKRRETGSGSS*SSGLVG
Trigger: GCCAACTAAACCTGAAGACAATGAGGAACCAGACCC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: KPLHKGTAALPILIKQIVGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHLADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGLADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTGAAGCCATAGACACATaGTCATCATGGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVEAIDT*SSWTGG
Trigger: ACCGCCCGTCCATGATGACAATGTGTCTATGGCTTC...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPLNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPRTLTDALKGPTFHILNGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GATGTCTGGTTTCACATCTTGCCTTGCTTTCACTTCCGACCTGTAACTATTTTCGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: DVWFHILPCFHFRPVTIFGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...GAAAATAGTTACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAACCTGGGTGGCACTTGTaGCCTACTTTCATAAATGGC +
Preference number: 5 (lower is better)
Translates to: ITLLTKKLSISASLGRQKPGWHL*PTFING
Trigger: GCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGG...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000628980.2
CDS-3UTR CAA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGLPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: CSSRYFGSSIAAKAPTRELPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 5 (lower is better)
Translates to: EITLLTKKLSISASLGRQLRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGTTGCAGCTGAAGTGGTaGAGGTGGTGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KPLHKGTAALPILIKQIVLQLKW*RWCWLG
Trigger: GCCCAGCCAGCACCACCTCAACCACTTCAGCTGCAA...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACTATTTTCGTGTCCTaGCAGCTGAAGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: YLSGARSPRTLTDALKGPTIFVS*QLKWLR
Trigger: CCTCAACCACTTCAGCTGCAAGGACACGAAAATAGT...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGA +
Preference number: 5 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEVWFHI*PCFHFR
Trigger: TCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGA +
Preference number: 5 (lower is better)
Translates to: YLSGARSPRTLTDALKGPVWFHI*PCFHFR
Trigger: TCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp TGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAAATCAAAATCCTGGGGTaGTCTGTAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: CSSRYFGSSIAAKAPTREIKILG*SVVRQR
Trigger: CCTCTGTCGGACTACAGACAACCCCAGGATTTTGAT...TTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGATCAAAATCCTGGGGTaGTCTGTAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKIKILG*SVVRQR
Trigger: CCTCTGTCGGACTACAGACAACCCCAGGATTTTGAT...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CCAGATTTGATGAGTTCTATTGCTCTGGCATGTGTCATGTCCCTTGTGCTTTCCATCAAAATCCTGGGGTaGTCTGTAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: PDLMSSIALACVMSLVLSIKILG*SVVRQR
Trigger: CCTCTGTCGGACTACAGACAACCCCAGGATTTTGAT...GGAAAGCACAAGGGACATGACACATGCCAGAGCAATAGAACTCATCAAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTCTGAATCCAAATCCTTaGGCTCCTTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: YLSGARSPRTLTDALKGPLNPNP*APFSMS
Trigger: GGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAG...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: ASWIYACDSENKLKRRETSSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGTCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKSSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCGATGCTCCCAGGCCTaGGTGCCTCGTGGATCTATG +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISRCSQA*VPRGSM
Trigger: CATAGATCCACGAGGCACCAAGGCCTGGGAGCATCG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGGGGGCTTTAGGATCAGTTACACTACAGAAGCATaGTCCAAAACCAGATTCAAT +
Preference number: 5 (lower is better)
Translates to: FFHSCQSPHKGTGGFRISYTTEA*SKTRFN
Trigger: ATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTA...ACTGATCCTAAAGCCCCCGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTACCTCCTTATGTGGCCTaGTGGTGCCTAGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVPPYVA*WCLELC
Trigger: ACAGAGCTCTAGGCACCACAAGGCCACATAAGGAGG...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR CAA 90 bp TCCACAAATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACTCCTATTTCCATACTTaGCCCGGGACACTCAGGCCA +
Preference number: 5 (lower is better)
Translates to: STNWQMGKPGLSLILFLYSYFHT*PGTLRP
Trigger: TGGCCTGAGTGTCCCGGGCAAAGTATGGAAATAGGA...GTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS TCA 90 bp CTCTTCTGGAGGTTTAGCCTTTTTCGCAAGTCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATGGTGGTTCTAAGTAGCCCTGAAGGA +
Preference number: 5 (lower is better)
Translates to: LFWRFSLFRKSWIQP*CCLCVMVVLSSPEG
Trigger: TCCTTCAGGGCTACTTAGAACCACCATAACACAAAGACAACATCATGGCTGGATCCACGACTTGCGAAAAAGGCTAAACCTCCAGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000519748.5
ENST00000520379.2
ENST00000634996.1
ENST00000637249.1
ENST00000637282.1
CDS GCA 90 bp GGCCCAATAAGTAGAAATATGGGGACCCATGCTTGTCACTTTTCATaGACATGGAGAGACTGGAAGGTACCATTCCATATTCTGGGACCT +
Preference number: 5 (lower is better)
Translates to: GPISRNMGTHACHFS*TWRDWKVPFHILGP
Trigger: AGGTCCCAGAATATGGAATGGTACCTTCCAGTCTCTCCATGTGCATGAAAAGTGACAAGCATGGGTCCCCATATTTCTACTTATTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS GCA 90 bp TTGGGAATGGCTTGCACTTCCACTGATGGACCCATCAAGCAGGTATaGGTTTTCTCATTGGCCTGGTGGATTTCTGAAAAGAAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: LGMACTSTDGPIKQV*VFSLAWWISEKKCS
Trigger: AGAACACTTCTTTTCAGAAATCCACCAGGCCAATGAGAAAACGCATACCTGCTTGATGGGTCCATCAGTGGAAGTGCAAGCCATTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 90 bp GTACTCCAAATATGTTTCATAGTTGTGTCTTCCATTGACCATCACTaGAGGTGGCCTCTCCATTATTGCAAGGGGTGGCACCATGCTGTT +
Preference number: 5 (lower is better)
Translates to: VLQICFIVVSSIDHH*RWPLHYCKGWHHAV
Trigger: AACAGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGAAGACACAACTATGAAACATATTTGGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS CCA 90 bp ATAAGTAGAAATATGGGGACCCATGCTTGTCACTTTTCATGCACATaGAGAGACTGGAAGGTACCATTCCATATTCTGGGACCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: ISRNMGTHACHFSCT*RDWKVPFHILGPVP
Trigger: CGGGACAGGTCCCAGAATATGGAATGGTACCTTCCAGTCTCTCCATGTGCATGAAAAGTGACAAGCATGGGTCCCCATATTTCTACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS-3UTR CAA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAATCAACAATTCCTCCTaGCTTGACACACTTGAGCCG +
Preference number: 5 (lower is better)
Translates to: KLSISASLGRQKSLFIKEINNSS*LDTLEP
Trigger: CGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGAT...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: ACDSENKLKRRETEPKKNVLLAA*GYRSNC
Trigger: ACAATTACTACGGTACCCCAAAGCCGCCAGCAGAAC...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQVLLAA*GYRSNC
Trigger: ACAATTACTACGGTACCCCAAAGCCGCCAGCAGAAC...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCAATGGGACAGTCCTTAAGTATATCCACTACTTCTGTATGGCTCAGGTTCTGGTTTTCCTTCAGCACTaGGAGTGGCTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: SNGTVLKYIHYFCMAQVLVFLQH*EWLLEV
Trigger: TACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAAC...CAGAACCTGAGCCATACAGAAGTAGTGGATATACTTAAGGACTGTCCCATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAGGGTCTGGTTCCTCATaGTCTTCAGGTTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: TLPLLCQSANEVMETGFKGSGSS*SSGLVG
Trigger: GCCAACTAAACCTGAAGACAATGAGGAACCAGACCC...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AATCATAAAAGGTGCTTCTTTCTTTCAGCTTTGACAGCCTTCACTTGCATTTCAGGGCCTGCAGGGGCTTaGTTCCAAGTTCTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: NHKRCFFLSALTAFTCISGPAGA*FQVLCG
Trigger: CCCACACAGAACTTGGAACAAAGCCCCTGCAGGCCC...TGAAATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAAGCACCTTTTATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGTGGCCTCTCCATTATaGCAAGGGGTGGCACCATGC +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISVASPL*QGVAPC
Trigger: GCATGGTGCCACCCCTTGCAATAATGGAGAGGCCAC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACGAAGCCATAGACACATaGTCATCATGGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: SPRTLTDALKGPTFHILNEAIDT*SSWTGG
Trigger: ACCGCCCGTCCATGATGACAATGTGTCTATGGCTTC...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519748.5
CDS-3UTR CAA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACGAAGCCATAGACACATaGTCATCATGGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: ACDSENKLKRRETEPKKNEAIDT*SSWTGG
Trigger: ACCGCCCGTCCATGATGACAATGTGTCTATGGCTTC...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: EITLLTKKLSISASLGRQLNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTCTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: YLSGARSPRTLTDALKGPLNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACGGTCCTGGGTGGCACTaGTTGCCTACTTTCATAAAT +
Preference number: 5 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHGPGWH*LPTFIN
Trigger: ATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGTCCTGGGTGGCACTaGTTGCCTACTTTCATAAAT +
Preference number: 5 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKGPGWH*LPTFIN
Trigger: ATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000522391.3
ENST00000626691.2
ENST00000628980.2
CDS-3UTR CAA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLRLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACATGAAAGGTTGACCTGCCCATaGCGGGCTGCGTGGTGCATG +
Preference number: 5 (lower is better)
Translates to: FIFVFPYPTFWAKSLQHERLTCP*RAAWCM
Trigger: CATGCACCACGCAGCCCGCAATGGGCAGGTCAACCT...TTCATGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CAA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVCCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACTGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: APLFSCFHTQHFGPNHFNCCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...GTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CAA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGATGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: PLLCQSANEVMETGFKIRCCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATTGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: SSHTHRCPERSYISYFKHCCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...ATGTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGACTATTTTCGTGTCCTaGCAGCTGAAGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLTIFVS*QLKWLR
Trigger: CCTCAACCACTTCAGCTGCAAGGACACGAAAATAGT...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp AAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGGAAGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: KLSISASLGRQKSLFIKEVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...TTCCTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGATCAAAATCCTGGGGTaGTCTGTAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEIKILG*SVVRQR
Trigger: CCTCTGTCGGACTACAGACAACCCCAGGATTTTGAT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTGTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACCTGAATCCAAATCCTTaGGCTCCTTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: SVMFFTLFWFFHSCQSPHLNPNP*APFSMS
Trigger: GGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAG...GTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGCTGAATCCAAATCCTTaGGCTCCTTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKLNPNP*APFSMS
Trigger: GGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAG...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGCTCCAATCAAAATAGGCTGTCCAGGCTCATCTCCCCCGAGGATTCTGAAGCCATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: SSNQNRLSRLISPEDSEAIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...GGCTTCAGAATCCTCGGGGGAGATGAGCCTGGACAGCCTATTTTGATTGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp TCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAACCGCTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 5 (lower is better)
Translates to: SSRYFGSSIAAKAPTREPLAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...CGGTTCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACGTCGTGTTCCCGTTTGATATCCCAAGTTGGGCCTGGGCTTATCTGGTGGGAACAAGTGTTTGTGCTTTaGTTTACGATGAATGGGTTT +
Preference number: 5 (lower is better)
Translates to: TSCSRLISQVGPGLIWWEQVFVL*FTMNGF
Trigger: AAACCCATTCATCGTAAACAAAAGCACAAACACTTG...TTCCCACCAGATAAGCCCAGGCCCAACTTGGGATATCAAACGGGAACACGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629359.2
CDS-3UTR CAA 90 bp TATTTAAGTGGTGCTAGATCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTGATCCAGCCATGATGTaGTCTTTGTGTTATGGTGGT +
Preference number: 5 (lower is better)
Translates to: YLSGARSPRTLTDALKGPDPAMM*SLCYGG
Trigger: ACCACCATAACACAAAGACAACATCATGGCTGGATC...AGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGATCTAGCACCACTTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519748.5
CDS-3UTR CAA 90 bp CTTCACACCCTGAAGATATGTTGCTTGTCTCTGGCCCCAGTTACAAATCCTTTGCTGAAGATATGTTGCTaGTCTCTGGCCCCAGTTACA +
Preference number: 5 (lower is better)
Translates to: LHTLKICCLSLAPVTNPLLKICC*SLAPVT
Trigger: TGTAACTGGGGCCAGAGACAAGCAACATATCTTCAG...CAAAGGATTTGTAACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACCACCCTGAAGATATGTaGCTTGTCTCTGGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: SPRTLTDALKGPTFHILNHPEDM*LVSGPS
Trigger: ACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTG...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp TCCACAAATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACTTGCTGAGCCAGTGTTaGTCTTACCTCCTCGATGGA +
Preference number: 5 (lower is better)
Translates to: STNWQMGKPGLSLILFLYLLSQC*SYLLDG
Trigger: TCCATCGAGGAGGTAAGACAAACACTGGCTCAGCAA...GTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp GTGCTGCTCACAAATGCCTGGTGTTTGCTGTCCGTTTCCAAACAAGGAATCAACACAAATGCCTGGTGTTaGCTGTCCGTTTCCAAACAA +
Preference number: 5 (lower is better)
Translates to: VLLTNAWCLLSVSKQGINTNAWC*LSVSKQ
Trigger: TTGTTTGGAAACGGACAGCAAACACCAGGCATTTGT...GTTGATTCCTTGTTTGGAAACGGACAGCAAACACCAGGCATTTGTGAGCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS TCA 90 bp ATCCACATGAGAAATTCATTTGGGGCTTGTAATAGGTGGGACAGCTaGTTCAAAGAAGTACAGGCAGATTCATCAGTGCTCAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: IHMRNSFGACNRWDS*FKEVQADSSVLSQW
Trigger: CCACTGGCTGAGCACTGATGAATCTGCCTGTACTTCTTTGAATCAGCTGTCCCACCTATTACAAGCCCCAAATGAATTTCTCATGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440555.2
CDS TCA 90 bp GAACAGGGATGCCAAGGAGGAGAGCCACCTGCTCAACAGTTGGCATaGCTAATCTCAATGATTTGTCATGAAAACCTGTGTAAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: EQGCQGGEPPAQQLA*LISMICHENLCKGN
Trigger: GTTTCCTTTACACAGGTTTTCATGACAAATCATTGAGATTAGTCATGCCAACTGTTGAGCAGGTGGCTCTCCTCCTTGGCATCCCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS GCA 90 bp CTAGAATCTAACAGCTTTCAAATTTATGTCCCTAGCTCCAAGCTCTaGACTGGACTCCAGATTCATGTATCCAGCTGCAGATCCACACCT +
Preference number: 5 (lower is better)
Translates to: LESNSFQIYVPSSKL*TGLQIHVSSCRSTP
Trigger: AGGTGTGGATCTGCAGCTGGATACATGAATCTGGAGTCCAGTGCAGAGCTTGGAGCTAGGGACATAAATTTGAAAGCTGTTAGATTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635863.1
CDS CCA 90 bp GCACTTCCACTGATGGACCCATCAAGCAGGTATGCGTTTTCTCATTaGCCTGGTGGATTTCTGAAAAGAAGTGTTCTTGAGAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: ALPLMDPSSRYAFSH*PGGFLKRSVLESSK
Trigger: CTTTGAACTCTCAAGAACACTTCTTTTCAGAAATCCACCAGGCCAATGAGAAAACGCATACCTGCTTGATGGGTCCATCAGTGGAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS-3UTR CAA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAACTGGCTTTCTCCATGTaGCTCACTGATTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: ITLLTKKLSISASLGRQKLAFSM*LTDLFL
Trigger: GAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAG...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTGAGGCACCTGCACTTTaGTCTTCATGTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: CKILHLRLSALFSSCQTTEAPAL*SSCSLD
Trigger: ATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTC...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GAAGCCAAATCCAGACTCCATCCTCCGAAGATGAACATCCAATTCCTTATAATCGGGTCTGGTTCCTCATaGTCTTCAGGTTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: EAKSRLHPPKMNIQFLIIGSGSS*SSGLVG
Trigger: GCCAACTAAACCTGAAGACAATGAGGAACCAGACCC...GATTATAAGGAATTGGATGTTCATCTTCGGAGGATGGAGTCTGGATTTGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp GGTCCTGGGTGGCACTTGTTGCCTACTTTCATAAATGGCCCTAGATTTCTCGTAGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: GPGWHLLPTFINGPRFLVGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...TACGAGAAATCTAGGGCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATCTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHLADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTCTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIALADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAGAAGCCATAGACACATaGTCATCATGGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: LEIAFTSCKILHLRLSALEAIDT*SSWTGG
Trigger: ACCGCCCGTCCATGATGACAATGTGTCTATGGCTTC...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAACTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: ITLLTKKLSISASLGRQKLNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: PLLCQSANEVMETGFKIRRLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLCQSANEVMETGFKIRQGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GAAGCCAAATCCAGACTCCATCCTCCGAAGATGAACATCCAATTCCTTATAATCCCTGGGTGGCACTTGTaGCCTACTTTCATAAATGGC +
Preference number: 5 (lower is better)
Translates to: EAKSRLHPPKMNIQFLIIPGWHL*PTFING
Trigger: GCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGG...GATTATAAGGAATTGGATGTTCATCTTCGGAGGATGGAGTCTGGATTTGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp TCCGGTATCTGTATCACTGGAACAAATCAAAACAAGACCCCTTATTCAAATGCATGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: SGICITGTNQNKTPYSNACCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...TGCATTTGAATAAGGGGTCTTGTTTTGATTTGTTCCAGTGATACAGATACCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CAA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCCTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLLPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTCTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 5 (lower is better)
Translates to: CKILHLRLSALFSSCQTTLRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...AGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAACTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 5 (lower is better)
Translates to: TLPLLCQSANEVMETGFKLRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TCCAATGGGACAGTCCTTAAGTATATCCACTACTTCTGTATGGCTCAGGTTCTGCTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 5 (lower is better)
Translates to: SNGTVLKYIHYFCMAQVLLRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...CAGAACCTGAGCCATACAGAAGTAGTGGATATACTTAAGGACTGTCCCATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGATCAAAATCCTGGGGTaGTCTGTAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLIKILG*SVVRQR
Trigger: CCTCTGTCGGACTACAGACAACCCCAGGATTTTGAT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACATCAAAATCCTGGGGTaGTCTGTAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: SPRTLTDALKGPTFHILNIKILG*SVVRQR
Trigger: CCTCTGTCGGACTACAGACAACCCCAGGATTTTGAT...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACATCAAAATCCTGGGGTaGTCTGTAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: ACDSENKLKRRETEPKKNIKILG*SVVRQR
Trigger: CCTCTGTCGGACTACAGACAACCCCAGGATTTTGAT...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACTCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: ACDSENKLKRRETEPKKNSSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: ASWIYACDSENKLKRRETRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 5 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAATGCAAGATCCTTCACTaGAGGCTTTCAGCCTTATTC +
Preference number: 5 (lower is better)
Translates to: ITLLTKKLSISASLGRQKCKILH*RLSALF
Trigger: GAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA...TTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GTCCTGAACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGCACAGCCCTGCGACTCAGCTCTaGAGTCTGCTTATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: VLNSIIPNCEKIFLQQHSPATQL*SLLISK
Trigger: CTTTGAGATAAGCAGACTCAAGAGCTGAGTCGCAGG...GCTGTGCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp GTGCTGCTCACAAATGCCTGGTGTTTGCTGTCCGTTTCCAAACAAGGAATCAACGAGCATACACTTACATaGGTGAGTGTTGTGGTATGT +
Preference number: 5 (lower is better)
Translates to: VLLTNAWCLLSVSKQGINEHTLT*VSVVVC
Trigger: ACATACCACAACACTCACCAATGTAAGTGTATGCTC...GTTGATTCCTTGTTTGGAAACGGACAGCAAACACCAGGCATTTGTGAGCAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS TCA 90 bp ACATGGTGTTTCACTGCCAAAGAATTCTCTCTCTTGAGTAAAGAATaGCATGGGTGGAAGTACATAAGGAACAGGGATGCCAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TWCFTAKEFSLLSKE*HGWKYIRNRDAKEE
Trigger: CTCCTCCTTGGCATCCCTGTTCCTTATGTACTTCCACCCATGTCATTCTTTACTCAAGAGAGAGAATTCTTTGGCAGTGAAACACCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 90 bp CACTTAGGACATGTGGTTAACTTAGGACTAGATTCTAAGGCCAAATaGATGCTGCAGCTTCAAAGTATTGGCCTAGAGCCAAGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: HLGHVVNLGLDSKAK*MLQLQSIGLEPRKW
Trigger: CCACTTTCTTGGCTCTAGGCCAATACTTTGAAGCTGCAGCATCCATTTGGCCTTAGAATCTAGTCCTAAGTTAACCACATGTCCTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 90 bp AGCAAGTATTTAATCTGTCTAGAATTGATCCTGGGGGACCTGGCATaGAGAAATCTTTCTGTTCCTATGGACCAGCCAAAAGGGAACAGA +
Preference number: 5 (lower is better)
Translates to: SKYLICLELILGDLA*RNLSVPMDQPKGNR
Trigger: TCTGTTCCCTTTTGGCTGGTCCATAGGAACAGAAAGATTTCTCCATGCCAGGTCCCCCAGGATCAATTCTAGACAGATTAAATACTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 90 bp ACATATTTCACTGATGGATCATGTTCTTATGGCAGAGGTACAGGCTaGCTTTGGTTGCACTTGACCTTCCTCTCTCAAGTTGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: TYFTDGSCSYGRGTG*LWLHLTFLSQVVLS
Trigger: AGAAAGGACAACTTGAGAGAGGAAGGTCAAGTGCAACCAAAGCCAGCCTGTACCTCTGCCATAAGAACATGATCCATCAGTGAAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS-3UTR CAA 90 bp AAAATAAAGTCAGAGGATACAGTACCAGGACGTGCAGCTACACTACAGAAGCATTTCTTTTTCAAGCTTTaGGACATGGCAGTGGGGCGA +
Preference number: 5 (lower is better)
Translates to: KIKSEDTVPGRAATLQKHFFFKL*DMAVGR
Trigger: TCGCCCCACTGCCATGTCCAAAAGCTTGAAAAAGAA...ATGCTTCTGTAGTGTAGCTGCACGTCCTGGTACTGTATCCTCTGACTTTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCGAGGCACCTGCACTTTaGTCTTCATGTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLEAPAL*SSCSLD
Trigger: ATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTC...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAGGGTCTGGTTCCTCATaGTCTTCAGGTTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: LEIAFTSCKILHLRLSALGSGSS*SSGLVG
Trigger: GCCAACTAAACCTGAAGACAATGAGGAACCAGACCC...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: ASWIYACDSENKLKRRETGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCGAAGCCATAGACACATaGTCATCATGGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSEAIDT*SSWTGG
Trigger: ACCGCCCGTCCATGATGACAATGTGTCTATGGCTTC...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACCCTGTTCTGTAACTTTCTTCCCAGATCATGGGAGGCACTATGGGTAATTGTTTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: TLFCNFLPRSWEALWVIVCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...AACAATTACCCATAGTGCCTCCCATGATCTGGGAAGAAAGTTACAGAACAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACGTTTGAGGACTGCCTaGATTCTCCCATCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: LLCQSANEVMETGFKIRQRLRTA*ILPSVH
Trigger: ATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGGTCAAAGGCCTCTGTaGAGTCAGGAAAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAGQRPL*SQERSS
Trigger: GGAGCTCCTTTCCTGACTCAACAGAGGCCTTTGACC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCATGCTGTTGGTGTAGGTaGCGTAGTCACTGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: CSYTTEALSKTRFNKLMACCWCR*RSHCVE
Trigger: CTCCACGCAGTGACTACGCAACCTACACCAACAGCA...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGCACAAGTAACTATTTTCGTGTCCTaGCAGCTGAAGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: AVFTGYGLQPHKAITAQVTIFVS*QLKWLR
Trigger: CCTCAACCACTTCAGCTGCAAGGACACGAAAATAGT...TACTTGTGCAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: ACDSENKLKRRETEPKKNVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGA +
Preference number: 5 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLVWFHI*PCFHFR
Trigger: TCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGA +
Preference number: 5 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLVWFHI*PCFHFR
Trigger: TCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTAATCAAAATCCTGGGGTaGTCTGTAGTCCGACAGAGG +
Preference number: 5 (lower is better)
Translates to: LEIAFTSCKILHLRLSALIKILG*SVVRQR
Trigger: CCTCTGTCGGACTACAGACAACCCCAGGATTTTGAT...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGCTGAATCCAAATCCTTaGGCTCCTTTCTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQLNPNP*APFSMS
Trigger: GGACATGGAGAAAGGAGCCAAAGGATTTGGATTCAG...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISTSCSR*ISQVGP
Trigger: AGGCCCAACTTGGGATATCAAACGGGAACACGACGT...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATAACGTCGTGTTCCCGTTaGATATCCCAAGTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: IILSQFQLAPCSLIFKAITSCSR*ISQVGP
Trigger: AGGCCCAACTTGGGATATCAAACGGGAACACGACGT...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 5 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGLAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGAAAAGCCTCTTCATAAAGCTTGCTCCGTGCAGTTaGATTTTTAAGGCGATATTC +
Preference number: 5 (lower is better)
Translates to: KKLSISASLGRQKSLFIKLAPCS*IFKAIF
Trigger: GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAG...CTTTATGAAGAGGCTTTTCTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GTGATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGAGGTGGAGCTTATTaGCATTTGAACTCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: VMFFTLFWFFHSCQSPHKGGGAY*HLNSCK
Trigger: TTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCC...CTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CACACCAAGAAACTCACTAGATTTCTAAGTCATCCTGCAGGAGGCAGGGAACGCTACACTACAGAAGCATaGTCCAAAACCAGATTCAAT +
Preference number: 5 (lower is better)
Translates to: HTKKLTRFLSHPAGGRERYTTEA*SKTRFN
Trigger: ATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTA...GCGTTCCCTGCCTCCTGCAGGATGACTTAGAAATCTAGTGAGTTTCTTGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTCACCCTGAAGATATGTaGCTTGTCTCTGGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCHPEDM*LVSGPS
Trigger: ACTGGGGCCAGAGACAAGCAACATATCTTCAGGGTG...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp ACTTGTCCGGTATCTGTATCACTGGAACAAATCAAAACAAGACCCCTTATTCAAGTATGGATGCCTTATTaGTGCCCACAGCCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: TCPVSVSLEQIKTRPLIQVWMPY*CPQPVA
Trigger: AGCCACAGGCTGTGGGCACAAATAAGGCATCCATAC...TTGAATAAGGGGTCTTGTTTTGATTTGTTCCAGTGATACAGATACCGGACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CAA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCTGGCTTTCTCCATGTaGCTCACTGATTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: ACDSENKLKRRETEPKKNLAFSM*LTDLFL
Trigger: GAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGAGAGGCACCTGCACTTTaGTCTTCATGTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: PLLCQSANEVMETGFKIREAPAL*SSCSLD
Trigger: ATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTC...TCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTCTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCLADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCCTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLLNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GTCCTGAACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGCACAGCCTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: VLNSIIPNCEKIFLQQHSLNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...GCTGTGCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: SPRTLTDALKGPTFHILNCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTCTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCLPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: IILSQFQLAPCSLIFKAILPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp GAGTTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGGTCTGGTTTCACATCTaGCCTTGCTTTCACTTCCGA +
Preference number: 5 (lower is better)
Translates to: EFTHIYFLGINIRVCVYVVWFHI*PCFHFR
Trigger: TCGGAAGTGAAAGCAAGGCAAGATGTGAAACCAGAC...CACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTTCCTCCCATTCCTTATaGCTGGTCCATCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCSSHSL*LVHLLP
Trigger: TGGCAGAAGATGGACCAGCAATAAGGAATGGGAGGA...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp AGGGTGAGCCATGGAAACATGTCATGGGTGAACGGTTCCGAATGTGTCAAAGAAATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: RVSHGNMSWVNGSECVKEIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...TTCTTTGACACATTCGGAACCGTTCACCCATGACATGTTTCCATGGCTCACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCTCCTCGCACACTCACAGATGCCCTGAAAGGTCCTACATTTCATATTTTAAACCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SPRTLTDALKGPTFHILNRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...GTTTAAAATATGAAATGTAGGACCTTTCAGGGCATCTGTGAGTGTGCGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: ACDSENKLKRRETEPKKNRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp CTTCACTTGAGGCTTTCAGCCTTATTCTCCTCCTGTCAAACAACTAAACTACTCCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: LHLRLSALFSSCQTTKLLRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...GAGTAGTTTAGTTGTTTGACAGGAGGAGAATAAGGCTGAAAGCCTCAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTTGCAAGATCCTTCACTaGAGGCTTTCAGCCTTATTC +
Preference number: 5 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIACKILH*RLSALF
Trigger: GAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GAAATCACATTGCTGACAAAGAAGCTATCCATCTCTGCTAGCCTGGGACGACAGCAAGTGTTTGTGCTTTaGTTTACGATGAATGGGTTT +
Preference number: 5 (lower is better)
Translates to: EITLLTKKLSISASLGRQQVFVL*FTMNGF
Trigger: AAACCCATTCATCGTAAACAAAAGCACAAACACTTG...CTGTCGTCCCAGGCTAGCAGAGATGGATAGCTTCTTTGTCAGCAATGTGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCCAGGGTACACTACAGAAGCATaGTCCAAAACCAGATTCAAT +
Preference number: 5 (lower is better)
Translates to: KLLLRILQLQGEGMISPGYTTEA*SKTRFN
Trigger: ATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTA...CCCTGGGCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCACAAATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACCAATGTGATACTTCCTaGAAGGAAAAACACCTGCAG +
Preference number: 5 (lower is better)
Translates to: STNWQMGKPGLSLILFLYQCDTS*KEKHLQ
Trigger: CTGCAGGTGTTTTTCCTTCAAGGAAGTATCACATTG...GTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS TCA 90 bp ATGGTGCTAGTCATTGTGCTTCCAACATGTGAAGGTAAATCTGCATaGAAGAGGTACAACTCCCATTTACAGGTAAGAAAATCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: MVLVIVLPTCEGKSA*KRYNSHLQVRKSGL
Trigger: GAGCCCAGATTTTCTTACCTGTAAATGGGAGTTGTACCTCTTTCATGCAGATTTACCTTCACATGTTGGAAGCACAATGACTAGCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGTTGTCACGAATGATTaGCTGAAGCTCATGGTCCAC +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISVVTND*LKLMVH
Trigger: GTGGACCATGAGCTTCAGCAAATCATTCGTGACAAC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGT +
Preference number: 5 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLVLLAA*GYRSNC
Trigger: ACAATTACTACGGTACCCCAAAGCCGCCAGCAGAAC...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCTGGCTTTCTCCATGTaGCTCACTGATTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: ILSQFQLAPCSLIFKAIFLAFSM*LTDLFL
Trigger: GAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAG...GAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATGAGGCACCTGCACTTTaGTCTTCATGTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: MEGAKERVHTHLFPGHKHEAPAL*SSCSLD
Trigger: ATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTC...ATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp GTCCTGAACAGCATCATTCCAAACTGTGAAAAGATTTTTCTACAGCAGCACAGCGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: VLNSIIPNCEKIFLQQHSGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...GCTGTGCTGCTGTAGAAAAATCTTTTCACAGTTTGGAATGATGCTGTTCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp AATCATAAAAGGTGCTTCTTTCTTTCAGCTTTGACAGCCTTCACTTGCATTTCACTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: NHKRCFFLSALTAFTCISLADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...TGAAATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAAGCACCTTTTATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGAAGCCATAGACACATaGTCATCATGGACGGGCGGT +
Preference number: 5 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQEAIDT*SSWTGG
Trigger: ACCGCCCGTCCATGATGACAATGTGTCTATGGCTTC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCGGTCCTGGGTGGCACTaGTTGCCTACTTTCATAAAT +
Preference number: 5 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSGPGWH*LPTFIN
Trigger: ATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000628980.2
CDS-3UTR CAA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAGGTCCTGGGTGGCACTaGTTGCCTACTTTCATAAAT +
Preference number: 5 (lower is better)
Translates to: WREQKKEFTHIYFLGINIGPGWH*LPTFIN
Trigger: ATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTCTAAGACCTGCATCCTaGATGAGCTTCACGATGTCA +
Preference number: 5 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCLRPAS*MSFTMS
Trigger: TGACATCGTGAAGCTCATCAAGGATGCAGGTCTTAG...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AGACTACAAGTGCAGGGAGGTGGAGCTTATTTGCATTTGAACTCCTGTAAAGAGAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 5 (lower is better)
Translates to: RLQVQGGGAYLHLNSCKEKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...CTCTTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCCCTGCACTTGTAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAGCCTTCAGAAACACTTaGCCTTTTAATATGTGTAGC +
Preference number: 5 (lower is better)
Translates to: TLPLLCQSANEVMETGFKAFRNT*PFNMCS
Trigger: GCTACACATATTAAAAGGCAAAGTGTTTCTGAAGGC...TTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATGTTCTTCACGTTATTTTGGTTCTTCCATAGCTGCCAAAGCCCCCACAAGGGACAAGTGTTTGTGCTTTaGTTTACGATGAATGGGTTT +
Preference number: 5 (lower is better)
Translates to: MFFTLFWFFHSCQSPHKGQVFVL*FTMNGF
Trigger: AAACCCATTCATCGTAAACAAAAGCACAAACACTTG...TCCCTTGTGGGGGCTTTGGCAGCTATGGAAGAACCAAAATAACGTGAAGAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCCTCGTGGATCTATGCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGTACACTACAGAAGCATaGTCCAAAACCAGATTCAAT +
Preference number: 5 (lower is better)
Translates to: ASWIYACDSENKLKRRETYTTEA*SKTRFN
Trigger: ATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTA...CGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGCATAGATCCACGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TACTTGTCCGGTATCTGTATCACTGGAACAAATCAAAACAAGACCCCTTATTCAGTTCTTGCCTTCTTCTaGAGCCAGAGGTCAGTAACT +
Preference number: 5 (lower is better)
Translates to: YLSGICITGTNQNKTPYSVLAFF*SQRSVT
Trigger: AGTTACTGACCTCTGGCTCAAGAAGAAGGCAAGAAC...TGAATAAGGGGTCTTGTTTTGATTTGTTCCAGTGATACAGATACCGGACAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS-3UTR CAA 90 bp TCCACAAATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACTTCTTTCTTTCAGCTTaGACAGCCTTCACTTGCATT +
Preference number: 5 (lower is better)
Translates to: STNWQMGKPGLSLILFLYFFLSA*TAFTCI
Trigger: AATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAA...GTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATTTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS TCA 90 bp GTCAAAGGGTACAAAGTTTCAGTTAGAAGGAGGAATCGGTTCTGGTaGTCTATTACTCAGCATGGTGACTATAGTCATCATGGATTGCAT +
Preference number: 5 (lower is better)
Translates to: VKGYKVSVRRRNRFW*SITQHGDYSHHGLH
Trigger: ATGCAATCCATGATGACTATAGTCACCATGCTGAGTAATAGATCACCAGAACCGATTCCTCCTTCTAACTGAAACTTTGTACCCTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS TCA 90 bp ATATCTCAGGAGGATCCCATATTACCGACTCTGAGAGGAGAAATATaGTGGGGCTTTATACACACTTTAACCAATCTTGCATCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: ISQEDPILPTLRGEI*WGFIHTLTNLASKV
Trigger: TACCTTGGATGCAAGATTGGTTAAAGTGTGTATAAAGCCCCATCATATTTCTCCTCTCAGAGTCGGTAATATGGGATCCTCCTGAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS GCA 90 bp AAAGAAGTGTTCTTGAGAGTTCAAAGGCACTCCTTCCCAGATAGCTaGCTTAGAATGATAAGAAAGTCCCAACAGAAAGTATTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: KEVFLRVQRHSFPDS*LRMIRKSQQKVFLG
Trigger: TCCCAGAAATACTTTCTGTTGGGACTTTCTTATCATTCTAAGGCAGCTATCTGGGAAGGAGTGCCTTTGAACTCTCAAGAACACTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 90 bp CCCACATATTTTATTGCTGAGCCAGTGTTTGTCTTACCTCCTCGATaGATAATCAAAGAAGTTTCACTTCCAATGGGACAGTCCTTAAGT +
Preference number: 5 (lower is better)
Translates to: PTYFIAEPVFVLPPR*IIKEVSLPMGQSLS
Trigger: ACTTAAGGACTGTCCCATTGGAAGTGAAACTTCTTTGATTATCCATCGAGGAGGTAAGACAAACACTGGCTCAGCAATAAAATATGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000628781.1
ENST00000630991.2
ENST00000636039.1
CDS CCA 90 bp TTATCTCTCAACATAAAAATATTAATACTGCCCATTGTACTCACATaGCACCGTGCGGAGGTAGAGGTTGTCACGAATGATTTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LSLNIKILILPIVLT*HRAEVEVVTNDLLK
Trigger: CTTCAGCAAATCATTCGTGACAACCTCTACCTCCGCACGGTGCCATGTGAGTACAATGGGCAGTATTAATATTTTTATGTTGAGAGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628997.1
CDS-3UTR CAA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACGTTTTCCTTCAGCACTaGGAGTGGCTCCTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYVFLQH*EWLLEV
Trigger: TACTTCCAGGAGCCACTCCAAGTGCTGAAGGAAAAC...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCTGGCTTTCTCCATGTaGCTCACTGATTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISLAFSM*LTDLFL
Trigger: GAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGAGGCACCTGCACTTTaGTCTTCATGTTCACTGGAT +
Preference number: 5 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAEAPAL*SSCSLD
Trigger: ATCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGGGTCTGGTTCCTCATaGTCTTCAGGTTTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQGSGSS*SSGLVG
Trigger: GCCAACTAAACCTGAAGACAATGAGGAACCAGACCC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAGGAAGCTCATTTTCTTaGCACTCTTCTGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRGSSFS*HSSGGL
Trigger: TAAACCTCCAGAAGAGTGCAAAGAAAATGAGCTTCC...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCCTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLLADHQ*AWSAEN
Trigger: ATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAG...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISLNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATACTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: WREQKKEFTHIYFLGINILNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATACTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: IILSQFQLAPCSLIFKAILNVKY*FHPLSC
Trigger: ACAGGACAGCGGGTGAAACAAATACTTGACATTCAG...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAACTCCCACTTTTAGTTTaGCACAGCGATCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQLPLLV*HSDLQD
Trigger: GTCCTGCAGATCGCTGTGCAAAACTAAAAGTGGGAG...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS-3UTR CAA 90 bp TGCAGCTACACTACAGAAGCATTGTCCAAAACCAGATTCAATAAATTAATGGCAGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: CSYTTEALSKTRFNKLMAVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...TGCCATTAATTTATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTAGCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCCGTCTTCCTCCAGATTaGATGAGTTCTATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISRLPPD*MSSIAL
Trigger: CAGAGCAATAGAACTCATCAAATCTGGAGGAAGACG...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGGCCTTCAGAAACACTTaGCCTTTTAATATGTGTAGC +
Preference number: 5 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLAFRNT*PFNMCS
Trigger: GCTACACATATTAAAAGGCAAAGTGTTTCTGAAGGC...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAGGAGGTGGAGCTTATTaGCATTTGAACTCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRGGGAY*HLNSCK
Trigger: TTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCC...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATGCAAGATCCTTCACTaGAGGCTTTCAGCCTTATTC +
Preference number: 5 (lower is better)
Translates to: IILSQFQLAPCSLIFKAICKILH*RLSALF
Trigger: GAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCTGCAAGATCCTTCACTaGAGGCTTTCAGCCTTATTC +
Preference number: 5 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSCKILH*RLSALF
Trigger: GAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTGCCATGATGTTGTCTTaGTGTTATGGTGGTTCTAAG +
Preference number: 5 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCAMMLS*CYGGSK
Trigger: CTTAGAACCACCATAACACAAAGACAACATCATGGC...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519748.5
CDS-3UTR CAA 90 bp GCTCCTTTATTTTCGTGTTTCCATACCCAACATTTTGGGCCAAATCACTTCAACTCCATACCCAACATTTaGGGCCAAATCACTTCAACA +
Preference number: 5 (lower is better)
Translates to: APLFSCFHTQHFGPNHFNSIPNI*GQITST
Trigger: TGTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGA...GTTGAAGTGATTTGGCCCAAAATGTTGGGTATGGAAACACGAAAATAAAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS-3UTR CAA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTTACCCACATATTTTATaGCTGAGCCAGTGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLYPHIL*LSQCLS
Trigger: AGACAAACACTGGCTCAGCAATAAAATATGTGGGTA...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS-3UTR CAA 90 bp AATTGGCAAATGGGAAAACCAGGGCTTAGCCTGATCCTTTTCCTTTACACTCTTCAGCTATTGGAAACCTaGTACAACAGCCATTTTAGA +
Preference number: 5 (lower is better)
Translates to: NWQMGKPGLSLILFLYTLQLLET*YNSHFR
Trigger: TCTAAAATGGCTGTTGTACAAGGTTTCCAATAGCTG...AAGAGTGTAAAGGAAAAGGATCAGGCTAAGCCCTGGTTTTCCCATTTGCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS TCA 90 bp GTCATTTGCAACAACATGGATGGACCTAGAGGACATTATATTGAGTaGTTTAAGCCAGGCACAGAGAGACAAATACGACATGATTTCACT +
Preference number: 5 (lower is better)
Translates to: VICNNMDGPRGHYIE*FKPGTERQIRHDFT
Trigger: AGTGAAATCATGTCGTATTTGTCTCTCTGTGCCTGGCTTAAATCACTCAATATAATGTCCTCTAGGTCCATCCATGTTGTTGCAAATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 90 bp TTCAGTGCTTCTTCCACTGAGGCATATTTCCTGCATTCAAGGTTTTaGTTTCATTTGCTGTTCACATTTGATTTGGGTACACAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: FSASSTEAYFLHSRF*FHLLFTFDLGTQGD
Trigger: ATCTCCTTGTGTACCCAAATCAAATGTGAACAGCAAATGAAACCAAAACCTTGAATGCAGGAAATATGCCTCAGTGGAAGAAGCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS-3UTR CAA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGGTTGTCACGAATGATTaGCTGAAGCTCATGGTCCAC +
Preference number: 5 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKVVTND*LKLMVH
Trigger: GTGGACCATGAGCTTCAGCAAATCATTCGTGACAAC...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000637441.1
CDS-3UTR CAA 90 bp AAGATGAACATCCAATTCCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: KMNIQFLIIWTRGIHSKTCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...AGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGGAATTGGATGTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS-3UTR CAA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCGGTCCTGGGTGGCACTaGTTGCCTACTTTCATAAAT +
Preference number: 5 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLGPGWH*LPTFIN
Trigger: ATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACC...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354212.9
ENST00000628980.2
CDS-3UTR CAA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCACTATTTTCGTGTCCTaGCAGCTGAAGTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLTIFVS*QLKWLR
Trigger: CCTCAACCACTTCAGCTGCAAGGACACGAAAATAGT...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAGTTTCACATCTTGCCTaGCTTTCACTTCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQVSHLA*LSLPTC
Trigger: ACAGGTCGGAAGTGAAAGCAAGGCAAGATGTGAAAC...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGTTTGTGATTGCTATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: QLAPCSLIFKAIFQFVIAIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...AGCAATCACAAACTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GATGATGTGCTGTCTTCACAGGTTATGGATTACAGCCGCATAAAGCAATTACTGATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: DDVLSSQVMDYSRIKQLLIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...CAGTAATTGCTTTATGCGGCTGTAATCCATAACCTGTGAAGACAGCACATCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATATTCCAGATAAGTGAAATCACATaGCTGACAAAGAAGCTATCC +
Preference number: 5 (lower is better)
Translates to: LSQFQLAPCSLIFKAIFQISEIT*LTKKLS
Trigger: GGATAGCTTCTTTGTCAGCAATGTGATTTCACTTAT...CTGGAATATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp GCGTGTGACAGTGAAAATAAATTAAAACGCCGTGAGACGGAACCTAAGAAGAACCAAGTGTTTGTGCTTTaGTTTACGATGAATGGGTTT +
Preference number: 5 (lower is better)
Translates to: ACDSENKLKRRETEPKKNQVFVL*FTMNGF
Trigger: AAACCCATTCATCGTAAACAAAAGCACAAACACTTG...GTTCTTCTTAGGTTCCGTCTCACGGCGTTTTAATTTATTTTCACTGTCACACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
CDS TCA 90 bp TTTGCTGAAGCTCATGGTCCACAGAACCCTTTTGAAATCGTAAGTTaGGGTAGTGACGAAGGTCTTTATCAACAATTCCTCCTATTATTT +
Preference number: 5 (lower is better)
Translates to: FAEAHGPQNPFEIVS*GSDEGLYQQFLLLF
Trigger: AAATAATAGGAGGAATTGTTGATAAAGACCTTCGTCACTACCTCAACTTACGATTTCAAAAGGGTTCTGTGGACCATGAGCTTCAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636989.1
CDS GCA 90 bp GACACTCTGACCAATAGGAACAGACTGGAAAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGACACAAACTTCATTAATATAGACAAT +
Preference number: 5 (lower is better)
Translates to: DTLTNRNRLEKFDNI*MSVSKDTNFINIDN
Trigger: ATTGTCTATATTAATGAAGTTTGTGTCCTTGGACACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGGTCAGAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS GCA 90 bp TATCTGTATCACTGGAACAAATCAAAACAAGACCCCTTATTCAAATaGAGGCAAATTTCAGCACTTACTTATAGTGGATCCAGACTCAGG +
Preference number: 5 (lower is better)
Translates to: YLYHWNKSKQDPLFK*RQISALTYSGSRLR
Trigger: CCTGAGTCTGGATCCACTATAAGTAAGTGCTGAAATTTGCCTGCATTTGAATAAGGGGTCTTGTTTTGATTTGTTCCAGTGATACAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524268.1
CDS CCA 90 bp GTTCTCTGCAGCCATCTTATGTGGACAATTGATCCTGATTTTGTCTaGTTGCTACATATAGATACAACCTATAACGGATCTAAGAGAACT +
Preference number: 5 (lower is better)
Translates to: VLCSHLMWTIDPDFV*LLHIDTTYNGSKRT
Trigger: AGTTCTCTTAGATCCGTTATAGGTTGTATCTATATGTAGCAACCAGACAAAATCAGGATCAATTGTCCACATAAGATGGCTGCAGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 90 bp TTTACTTCTCCAAATGCCCTGTGTTTCCATGTGTCTTGGACTTGCTaGCACCACACTAAAATAGCTAATAGTTTAGAAATCCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: FTSPNALCFHVSWTC*HHTKIANSLEILKF
Trigger: GAATTTCAGGATTTCTAAACTATTAGCTATTTTAGTGTGGTGCCAGCAAGTCCAAGACACATGGAAACACAGGGCATTTGGAGAAGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636989.1
CDS CCA 90 bp CTCCTATTATTTACTTCTCCAAATGCCCTGTGTTTCCATGTGTCTTaGACTTGCTGGCACCACACTAAAATAGCTAATAGTTTAGAAATC +
Preference number: 5 (lower is better)
Translates to: LLLFTSPNALCFHVS*TCWHHTKIANSLEI
Trigger: GATTTCTAAACTATTAGCTATTTTAGTGTGGTGCCAGCAAGTCCAAGACACATGGAAACACAGGGCATTTGGAGAAGTAAATAATAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636989.1
CDS CCA 90 bp AGGCTTAATTCACTTTTGATATGGATTCTAACCCAGCAATGCTCATaGGATGTCAGCACAGAAATGGTTGTGATTGAAAATATCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RLNSLLIWILTQQCS*DVSTEMVVIENISG
Trigger: TCCTGAGATATTTTCAATCACAACCATTTCTGTGCTGACATCCCATGAGCATTGCTGGGTTAGAATCCATATCAAAAGTGAATTAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS CCA 90 bp TCCTGCATTCAAGGTTTTGGTTTCATTTGCTGTTCACATTTGATTTaGGTACACAAGGAGATTTCTATTGTGGTAGAGCTTTGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: SCIQGFGFICCSHLI*VHKEISIVVELWSS
Trigger: TGAACTCCAAAGCTCTACCACAATAGAAATCTCCTTGTGTACCCAAATCAAATGTGAACAGCAAATGAAACCAAAACCTTGAATGCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS-3UTR CAA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCTGTACATTCTGCTGGTaGATCTCAACAATGAGGTCG +
Preference number: 5 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLCTFCW*ISTMRS
Trigger: CGACCTCATTGTTGAGATCAACCAGCAGAATGTACA...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTGTATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: HTHLFPGHKHTCVCVCVCIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...ACACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAAAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 5 (lower is better)
Translates to: LLCQSANEVMETGFKIRQKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATAAGACAAATACTCTGCCTCTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGAATAAGTGAAATCACATaGCTGACAAAGAAGCTATCC +
Preference number: 5 (lower is better)
Translates to: IRQILCLCSVKVQMKSWRISEIT*LTKKLS
Trigger: GGATAGCTTCTTTGTCAGCAATGTGATTTCACTTAT...TCTCCATGACTTCATTTGCACTTTGACAGAGCAGAGGCAGAGTATTTGTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAAATTAAACTGCTACTCAGGATACTGCAATTACAAGGAGAGGGAATGATCAGCGCCTTCAGAAACACTTaGCCTTTTAATATGTGTAGC +
Preference number: 5 (lower is better)
Translates to: KIKLLLRILQLQGEGMISAFRNT*PFNMCS
Trigger: GCTACACATATTAAAAGGCAAAGTGTTTCTGAAGGC...GCTGATCATTCCCTCTCCTTGTAATTGCAGTATCCTGAGTAGCAGTTTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAGCCTCTTCATAAAGGAACTGCAGCGTTGCCTATCTTGATTAAACAAATTGTGGCCTTCAGAAACACTTaGCCTTTTAATATGTGTAGC +
Preference number: 5 (lower is better)
Translates to: KPLHKGTAALPILIKQIVAFRNT*PFNMCS
Trigger: GCTACACATATTAAAAGGCAAAGTGTTTCTGAAGGC...CACAATTTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTTATGAAGAGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAATGCAAGATCCTTCACTaGAGGCTTTCAGCCTTATTC +
Preference number: 5 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQCKILH*RLSALF
Trigger: GAATAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCA...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTGGAAATTGCTTTTACAAGCTGCAAGATCCTTCACTTGAGGCTTTCAGCCTTATACACTACAGAAGCATaGTCCAAAACCAGATTCAAT +
Preference number: 5 (lower is better)
Translates to: LEIAFTSCKILHLRLSALYTTEA*SKTRFN
Trigger: ATTGAATCTGGTTTTGGACAATGCTTCTGTAGTGTA...TAAGGCTGAAAGCCTCAAGTGAAGGATCTTGCAGCTTGTAAAAGCAATTTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AATCATAAAAGGTGCTTCTTTCTTTCAGCTTTGACAGCCTTCACTTGCATTTCAGCTGTTTTGAGTGCTTaGAATAGGCAACCACATGTT +
Preference number: 5 (lower is better)
Translates to: NHKRCFFLSALTAFTCISAVLSA*NRQPHV
Trigger: AACATGTGGTTGCCTATTCAAAGCACTCAAAACAGC...TGAAATGCAAGTGAAGGCTGTCAAAGCTGAAAGAAAGAAGCACCTTTTATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636039.1
CDS TCA 90 bp TTTCACATTATGTGTACATTGTGGATGCTTAATCCACACAAATATTaGGAAGCCACATGGTGTTTCACTGCCAAAGAATTCTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: FHIMCTLWMLNPHKY*EATWCFTAKEFSLL
Trigger: CAAGAGAGAGAATTCTTTGGCAGTGAAACACCATGTGGCTTCTCAATATTTGTGTGGATTAAGCATCCACAATGTACACATAATGTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS GCA 90 bp TTATTTACTTCTCCAAATGCCCTGTGTTTCCATGTGTCTTGGACTTaGTGGCACCACACTAAAATAGCTAATAGTTTAGAAATCCTGAAA +
Preference number: 5 (lower is better)
Translates to: LFTSPNALCFHVSWT*WHHTKIANSLEILK
Trigger: TTTCAGGATTTCTAAACTATTAGCTATTTTAGTGTGGTGCCAGCAAGTCCAAGACACATGGAAACACAGGGCATTTGGAGAAGTAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636989.1
CDS GCA 90 bp ATTTTGGCTTATGTTTCAGTGCTTCTTCCACTGAGGCATATTTCCTaGATTCAAGGTTTTGGTTTCATTTGCTGTTCACATTTGATTTGG +
Preference number: 5 (lower is better)
Translates to: ILAYVSVLLPLRHIS*IQGFGFICCSHLIW
Trigger: CCAAATCAAATGTGAACAGCAAATGAAACCAAAACCTTGAATGCAGGAAATATGCCTCAGTGGAAGAAGCACTGAAACATAAGCCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS CCA 90 bp TCAGAATTTCCTTTCATGGAATCAGTTCTCTGCAGCCATCTTATGTaGACAATTGATCCTGATTTTGTCTGGTTGCTACATATAGATACA +
Preference number: 5 (lower is better)
Translates to: SEFPFMESVLCSHLM*TIDPDFVWLLHIDT
Trigger: TGTATCTATATGTAGCAACCAGACAAAATCAGGATCAATTGTCCACATAAGATGGCTGCAGAGAACTGATTCCATGAAAGGAAATTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 90 bp TCCCGAAAAATTCATATTTGTAGAGTGTTTCAGAATTTCCTTTCATaGAATCAGTTCTCTGCAGCCATCTTATGTGGACAATTGATCCTG +
Preference number: 5 (lower is better)
Translates to: SRKIHICRVFQNFLS*NQFSAAILCGQLIL
Trigger: CAGGATCAATTGTCCACATAAGATGGCTGCAGAGAACTGATTCCATGAAAGGAAATTCTGAAACACTCTACAAATATGAATTTTTCGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS-3UTR CAA 90 bp TATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAGCATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: YLEWDLDDVLSSQVMDYSIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...GCTGTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp ATAATCTTGTCTCAGTTTCAGCTTGCTCCGTGCAGTTTGATTTTTAAGGCGATAATAAGTGAAATCACATaGCTGACAAAGAAGCTATCC +
Preference number: 5 (lower is better)
Translates to: IILSQFQLAPCSLIFKAIISEIT*LTKKLS
Trigger: GGATAGCTTCTTTGTCAGCAATGTGATTTCACTTAT...TATCGCCTTAAAAATCAAACTGCACGGAGCAAGCTGAAACTGAGACAAGATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TCCTGTCAAACAACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCGGAGGTGGAGCTTATTaGCATTTGAACTCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: SCQTTKLLRCLMKIKLLLGGGAY*HLNSCK
Trigger: TTTACAGGAGTTCAAATGCAAATAAGCTCCACCTCC...GAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGTTGTTTGACAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp CTGCTCTGTCAAAGTGCAAATGAAGTCATGGAGACAGGGTTTAAAATAAGACAACAAGTGTTTGTGCTTTaGTTTACGATGAATGGGTTT +
Preference number: 5 (lower is better)
Translates to: LLCQSANEVMETGFKIRQQVFVL*FTMNGF
Trigger: AAACCCATTCATCGTAAACAAAAGCACAAACACTTG...TTGTCTTATTTTAAACCCTGTCTCCATGACTTCATTTGCACTTTGACAGAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp TTCACACACATTTATTTCCTGGGCATAAACATACGTGTGTGTGTGTATGTGTGTAAAGAAATGCAACCATaGCGTGAACTGAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: FTHIYFLGINIRVCVYVCKEMQP*RELKFT
Trigger: TGTAAACTTCAGTTCACGCAATGGTTGCATTTCTTT...ACACACATACACACACACACGTATGTTTATGCCCAGGAAATAAATGTGTGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS-3UTR CAA 90 bp TGGAGGGAGCAAAAGAAAGAGTTCACACACATTTATTTCCTGGGCATAAACATAAAAGAAATGCAACCATaGCGTGAACTGAAGTTTACA +
Preference number: 5 (lower is better)
Translates to: WREQKKEFTHIYFLGINIKEMQP*RELKFT
Trigger: TGTAAACTTCAGTTCACGCAATGGTTGCATTTCTTT...TATGTTTATGCCCAGGAAATAAATGTGTGTGAACTCTTTCTTTTGCTCCCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519748.5
ENST00000637486.1
CDS TCA 90 bp TCCATCACCCAAAGGAATTTGTTCTTGACTCTTATCTTTATTGATTaGAGTGGGATTCTAAAAATCCATCTAGGTGAAAACACATCGTCC +
Preference number: 5 (lower is better)
Translates to: SITQRNLFLTLIFID*SGILKIHLGENTSS
Trigger: GGACGATGTGTTTTCACCTAGATGGATTTTTAGAATCCCACTTCAATCAATAAAGATAAGAGTCAAGAACAAATTCCTTTGGGTGATGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636989.1
CDS TCA 90 bp ATTTGTTACAGCAGCATTACAAAGTTAACACAACCTCCTGTTCCATaGATAGTAGGTAGGAAAATAACACCCCTTTCTTTAAAGGGAACA +
Preference number: 5 (lower is better)
Translates to: ICYSSITKLTQPPVP*IVGRKITPLSLKGT
Trigger: TGTTCCCTTTAAAGAAAGGGGTGTTATTTTCCTACCTACTATTCATGGAACAGGAGGTTGTGTTAACTTTGTAATGCTGCTGTAACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS-3UTR CAA 90 bp TATTATTTGGAATGGGATTTAGATGATGTGCTGTCTTCACAGGTTATGGATTACAAAGGAACTGCAGCGTaGCCTATCTTGATTAAACAA +
Preference number: 5 (lower is better)
Translates to: YYLEWDLDDVLSSQVMDYKGTAA*PILIKQ
Trigger: TTGTTTAATCAAGATAGGCAACGCTGCAGTTCCTTT...GTAATCCATAACCTGTGAAGACAGCACATCATCTAAATCCCATTCCAAATAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS TCA 90 bp CTAATTAGCGTTTTCTACTATTTCAGAAAGGCAACTTCCTTCTCCTaGAAAACATCCTGTTTAATATGTATTGTAAAGCATGGCGTATGC +
Preference number: 5 (lower is better)
Translates to: LISVFYYFRKATSFS*KTSCLICIVKHGVC
Trigger: GCATACGCCATGCTTTACAATACATATTAAACAGGATGTTTTTCAGGAGAAGGAAGTTGCCTTTCTGAAATAGTAGAAAACGCTAATTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS GCA 90 bp TTCCTAGATATCCTTGAAGTTAGAAATGCTACCAACTGCCCTTGTTaGAATGTGTTACATTTCATCCCAGGTATAATAAAACTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: FLDILEVRNATNCPC*NVLHFIPGIIKLVS
Trigger: TGAAACAAGTTTTATTATACCTGGGATGAAATGTAACACATTGCAACAAGGGCAGTTGGTAGCATTTCTAACTTCAAGGATATCTAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS GCA 90 bp GTTAACGTGGCAAACCCAGCTTATTTGATGATGTTTGGTGAACTTTaGATGTATGATAGGCTAAGCAGCAAAGTATATATCATGAATTTT +
Preference number: 5 (lower is better)
Translates to: VNVANPAYLMMFGEL*MYDRLSSKVYIMNF
Trigger: AAAATTCATGATATATACTTTGCTGCTTAGCCTATCATACATGCAAAGTTCACCAAACATCATCAAATAAGCTGGGTTTGCCACGTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS CCA 90 bp CTATTTTGTTTTTACTGCTTGGCAGAGGGTTCATCTCTACTAAGGTaGGTTATAAAGACAGTAACTGGTGAATTCCATTTATTTAGTTCA +
Preference number: 5 (lower is better)
Translates to: LFCFYCLAEGSSLLR*VIKTVTGEFHLFSS
Trigger: TGAACTAAATAAATGGAATTCACCAGTTACTGTCTTTATAACCCACCTTAGTAGAGATGAACCCTCTGCCAAGCAGTAAAAACAAAATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS-3UTR CAA 90 bp ACTAAACTACTCCGATGTTTGATGAAAATTAAACTGCTACTCAGGATACTGCAAATTGATTTCAATGATTaGATCTCCTACCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: TKLLRCLMKIKLLLRILQIDFND*ISYPHP
Trigger: AGGATGAGGGTAGGAGATCAAATCATTGAAATCAAT...TTGCAGTATCCTGAGTAGCAGTTTAATTTTCATCAAACATCGGAGTAGTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS-3UTR CAA 90 bp AAGAGTAAGAATATGGAAAGGATGAAGCCTCATTCATTCGGGCATATTAAAAAGATAAGTGAAATCACATaGCTGACAAAGAAGCTATCC +
Preference number: 5 (lower is better)
Translates to: KSKNMERMKPHSFGHIKKISEIT*LTKKLS
Trigger: GGATAGCTTCTTTGTCAGCAATGTGATTTCACTTAT...CTTTTTAATATGCCCGAATGAATGAGGCTTCATCCTTTCCATATTCTTACTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
CDS CCA 72 bp GCCGTCGTCCAGGGAGACGCCTACTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGAACTCCAGGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: AVVQGDAYFRQT*GGGSGRTPGGG
Trigger: CCCGCCCCCTGGAGTTCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAGTAGGCGTCTCCCTGGACGACGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628980.2
ENST00000629359.2
CDS CCA 72 bp CCCAGGCCTTGGTGCCTCGTGGATTTCCGGCAGACCTaGGGCGGCGGCAGCGGGAGAACTCCAGGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: PRPWCLVDFRQT*GGGSGRTPGGG
Trigger: CCCGCCCCCTGGAGTTCTCCCGCTGCCGCCGCCCCAGGTCTGCCGGAAATCCACGAGGCACCAAGGCCTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS GCA 72 bp CACGTGGGACTTCACGTCGATGCTCCCAGGCCTTGGTaGCTCGTGGATTTCCGGCAGACCTGGGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: HVGLHVDAPRPW*LVDFRQTWGGG
Trigger: GCCGCCGCCCCAGGTCTGCCGGAAATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS CCA 72 bp GGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTTaGTGCCTCGTGGATTTCCGGCAGACCTGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: GHVGLHVDAPRP*CLVDFRQTWGG
Trigger: GCCGCCCCAGGTCTGCCGGAAATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS CAA 72 bp CGGACACGTGGGACTTCACGTCGATGCTCCCAGGCCTaGGTGCCTCGTGGATTTCCGGCAGACCTGGGGCGG +
Preference number: 6 (lower is better)
Translates to: RTRGTSRRCSQA*VPRGFPADLGR
Trigger: CCGCCCCAGGTCTGCCGGAAATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS GCA 72 bp CTGGGTCGCGCTGATAGTAAGACAAGTCATTCACGCTaGGCGACCTCTCCGGGGCAGCACGGGGGCGGATGG +
Preference number: 6 (lower is better)
Translates to: LGRADSKTSHSR*ATSPGQHGGGW
Trigger: CCATCCGCCCCCGTGCTGCCCCGGAGAGGTCGCGCAGCGTGAATGACTTGTCTTACTATCAGCGCGACCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634996.1
CDS CAA 90 bp CCTCCTTGCTTGACACACTTGAGCCGGAGGGGGTCCTTGCAGTGTTaGATCACGGCCAGCACGTCCCTGATGGTGAGCCCCGCCACGGGG +
Preference number: 6 (lower is better)
Translates to: PPCLTHLSRRGSLQC*ITASTSLMVSPATG
Trigger: CCCCGTGGCGGGGCTCACCATCAGGGACGTGCTGGCCGTGATCAAACACTGCAAGGACCCCCTCCGGCTCAAGTGTGTCAAGCAAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000628997.1
ENST00000637441.1
CDS GCA 72 bp GCCCAAGCACACCGGACACGTGGGACTTCACGTCGATaGTCCCAGGCCTTGGTGCCTCGTGGATTTCCGGCA +
Preference number: 6 (lower is better)
Translates to: AQAHRTRGTSRR*SQALVPRGFPA
Trigger: TGCCGGAAATCCACGAGGCACCAAGGCCTGGGAGCATCGACGTGAAGTCCCACGTGTCCGGTGTGCTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637441.1
CDS GCA 72 bp CCGACACCAATTTGCTGCCGCTCTCATAGGCCACCTTaGCGGGCTTCACCTCCCCCAGGTAGGGGAACTGTC +
Preference number: 6 (lower is better)
Translates to: PTPICCRSHRPP*RASPPPGRGTV
Trigger: GACAGTTCCCCTACCTGGGGGAGGTGAAGCCCGGCAAGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS CAA 72 bp CGCGACCTCTCCGGGGCAGCACGGGGGCGGATGGATTaGGGCCTAGGTAATGTCCATGAGGAGCTGTCTACT +
Preference number: 6 (lower is better)
Translates to: RDLSGAARGRMD*GLGNVHEELST
Trigger: AGTAGACAGCTCCTCATGGACATTACCTAGGCCCAAATCCATCCGCCCCCGTGCTGCCCCGGAGAGGTCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634996.1
CDS CAA 90 bp TTCACGCTGCGCGACCTCTCCGGGGCAGCACGGGGGCGGATGGATTaGGGCCTAGGTAATGTCCATGAGGAGCTGTCTACTCGGAAACCT +
Preference number: 6 (lower is better)
Translates to: FTLRDLSGAARGRMD*GLGNVHEELSTRKP
Trigger: AGGTTTCCGAGTAGACAGCTCCTCATGGACATTACCTAGGCCCAAATCCATCCGCCCCCGTGCTGCCCCGGAGAGGTCGCGCAGCGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634996.1
CDS GCA 72 bp TCACCTCCAGCAGCAGCTCCTCCGACACCAATTTGCTaGCGCTCTCATAGGCCACCTTGCCGGGCTTCACCT +
Preference number: 6 (lower is better)
Translates to: SPPAAAPPTPIC*RSHRPPCRASP
Trigger: AGGTGAAGCCCGGCAAGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGGAGCTGCTGCTGGAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS GCA 72 bp CGTTCACCTCCAGCAGCAGCTCCTCCGACACCAATTTaGTGCCGCTCTCATAGGCCACCTTGCCGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: RSPPAAAPPTPI*CRSHRPPCRAS
Trigger: TGAAGCCCGGCAAGGTGGCCTATGAGAGCGGCAGCAAATTGGTGTCGGAGGAGCTGCTGCTGGAGGTGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS CAA 72 bp TTGACACACTTGAGCCGGAGGGGGTCCTTGCAGTGTTaGATCACGGCCAGCACGTCCCTGATGGTGAGCCCC +
Preference number: 6 (lower is better)
Translates to: LTHLSRRGSLQC*ITASTSLMVSP
Trigger: GGGGCTCACCATCAGGGACGTGCTGGCCGTGATCAAACACTGCAAGGACCCCCTCCGGCTCAAGTGTGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000628997.1
ENST00000637441.1
CDS CAA 90 bp CGGCTGGGCAGAGGTAGGAGAGCTTGGATGAGGTTGTGCTGTCCCTaGAATGACACTCAAGGCTGTGGCCCCGCAGCAGAGGAAGCAGTG +
Preference number: 6 (lower is better)
Translates to: RLGRGRRAWMRLCCP*NDTQGCGPAAEEAV
Trigger: CACTGCTTCCTCTGCTGCGGGGCCACAGCCTTGAGTGTCATTCAAGGGACAGCACAACCTCATCCAAGCTCTCCTACCTCTGCCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354212.9
CDS CAA 72 bp CCTCCTTGCTTGACACACTTGAGCCGGAGGGGGTCCTaGCAGTGTTTGATCACGGCCAGCACGTCCCTGATG +
Preference number: 6 (lower is better)
Translates to: PPCLTHLSRRGS*QCLITASTSLM
Trigger: CATCAGGGACGTGCTGGCCGTGATCAAACACTGCAAGGACCCCCTCCGGCTCAAGTGTGTCAAGCAAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000628997.1
ENST00000637441.1
CDS CAA 90 bp TCAACAATTCCTCCTTGCTTGACACACTTGAGCCGGAGGGGGTCCTaGCAGTGTTTGATCACGGCCAGCACGTCCCTGATGGTGAGCCCC +
Preference number: 6 (lower is better)
Translates to: STIPPCLTHLSRRGS*QCLITASTSLMVSP
Trigger: GGGGCTCACCATCAGGGACGTGCTGGCCGTGATCAAACACTGCAAGGACCCCCTCCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000628997.1
ENST00000637441.1
CDS CAA 90 bp CAGGGGGCGGGTTCGTCATATTCTGGGACCTGTCCCGTGCCTCTCTaGAGCAGCAGCCTCACTCGTCTTCCTCCAGATTTGATGAGTTCT +
Preference number: 6 (lower is better)
Translates to: QGAGSSYSGTCPVPL*SSSLTRLPPDLMSS
Trigger: AGAACTCATCAAATCTGGAGGAAGACGAGTGAGGCTGCTGCTCAAGAGAGGCACGGGACAGGTCCCAGAATATGACGAACCCGCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000535697.5
ENST00000628980.2
ENST00000637441.1
CDS CAA 90 bp AGTGAAGCCGAAGCCCTGGGCACGTGCCGTCTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAATGAGGCGGCCGATCTGTTATATCTG +
Preference number: 6 (lower is better)
Translates to: SEAEALGTCRLADHQ*AWSAENEAADLLYL
Trigger: CAGATATAACAGATCGGCCGCCTCATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAGACGGCACGTGCCCAGGGCTTCGGCTTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS CAA 72 bp AGAGGTAGGAGAGCTTGGATGAGGTTGTGCTGTCCCTaGAATGACACTCAAGGCTGTGGCCCCGCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: RGRRAWMRLCCP*NDTQGCGPAAE
Trigger: CTCTGCTGCGGGGCCACAGCCTTGAGTGTCATTCAAGGGACAGCACAACCTCATCCAAGCTCTCCTACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354212.9
CDS CAA 90 bp CATCATGGACGGGCGGTGGATACGTGCCGTCTAGCTGACCATCAGTaGGCATGGAGTGCAGAGAATGAGGCGGCCGATCTGTTATATCTG +
Preference number: 6 (lower is better)
Translates to: HHGRAVDTCRLADHQ*AWSAENEAADLLYL
Trigger: CAGATATAACAGATCGGCCGCCTCATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAGACGGCACGTATCCACCGCCCGTCCATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
CDS TCA 72 bp CACTGGTGCAGGATAAGGCTGGGAGGGCATCTCCCCTaGGGCACCTGCACTTTTGTCTTCATGTTCACTGGA +
Preference number: 6 (lower is better)
Translates to: HWCRIRLGGHLP*GTCTFVFMFTG
Trigger: TCCAGTGAACATGAAGACAAAAGTGCAGGTGCCTCAGGGGAGATGCCCTCCCAGCCTTATCCTGCACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636717.1
ENST00000637441.1
ENST00000637486.1
CDS CCA 72 bp CTGGGCACGTGCCGTCTAGCTGACCATCAGTTGGCATaGAGTGCAGAGAATGAGGCGGCCGATCTGTTATAT +
Preference number: 6 (lower is better)
Translates to: LGTCRLADHQLA*SAENEAADLLY
Trigger: ATATAACAGATCGGCCGCCTCATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAGACGGCACGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637486.1
CDS CAA 90 bp GAGGTCGCCTTCACACAGGCCAGGGCATCCCTGAATGTCAAGTATTaGTTTCACCCGCTGTCCTGTAGGACTGTCGGCAATAGTGAAGCC +
Preference number: 6 (lower is better)
Translates to: EVAFTQARASLNVKY*FHPLSCRTVGNSEA
Trigger: GGCTTCACTATTGCCGACAGTCCTACAGGACAGCGGGTGAAACAAATACTTGACATTCAGGGATGCCCTGGCCTGTGTGAAGGCGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS GCA 72 bp TCCATTGACCATCACTGGAGGTGGCCTCTCCATTATTaGAAGGGGTGGCACCATGCTGTTAGCAGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: SIDHHWRWPLHY*KGWHHAVSRVF
Trigger: GAAGACCCTGCTAACAGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS GCA 72 bp GCGGTATGGCCGGAGCAGATAAACTCGTTTGAGGACTaGCTTGATTCTCCCATCGGTCCATTATCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: AVWPEQINSFED*LDSPIGPLSGG
Trigger: GCCACCAGATAATGGACCGATGGGAGAATCAAGGCAGTCCTCAAACGAGTTTATCTGCTCCGGCCATACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524316.5
CDS GCA 72 bp GGTGAAGAGTGGTTTTTCGAACAGCCAGGGCCTCCCTaGTGGGTCGCGCTGATAGTAAGACAAGTCATTCAC +
Preference number: 6 (lower is better)
Translates to: GEEWFFEQPGPP*WVALIVRQVIH
Trigger: GTGAATGACTTGTCTTACTATCAGCGCGACCCAGCAGGGAGGCCCTGGCTGTTCGAAAAACCACTCTTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634996.1
CDS CCA 72 bp TGGACCAGCCAAAAGGGAACAGATCCCTTTGGGAAATaGCATCCTCCAATGCCAGATCCCAGTGCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: WTSQKGTDPFGK*HPPMPDPSAKG
Trigger: CCCTTTGGCACTGGGATCTGGCATTGGAGGATGCCATTTCCCAAAGGGATCTGTTCCCTTTTGGCTGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 72 bp GAAGAGTGGTTTTTCGAACAGCCAGGGCCTCCCTGCTaGGTCGCGCTGATAGTAAGACAAGTCATTCACGCT +
Preference number: 6 (lower is better)
Translates to: EEWFFEQPGPPC*VALIVRQVIHA
Trigger: AGCGTGAATGACTTGTCTTACTATCAGCGCGACCCAGCAGGGAGGCCCTGGCTGTTCGAAAAACCACTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634996.1
CDS CCA 72 bp CCTAGGCCTTCACATTCACTCATCACTCAGTCACTCTaGGCTCACCCGCTAATGGACTCACCCAGAGCAACT +
Preference number: 6 (lower is better)
Translates to: PRPSHSLITQSL*AHPLMDSPRAT
Trigger: AGTTGCTCTGGGTGAGTCCATTAGCGGGTGAGCCCAGAGTGACTGAGTGATGAGTGAATGTGAAGGCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS CAA 72 bp GGTCCCATTGTGTCGTGGCTAAGCTCCCACACAAGCTaGTCCCCAAGCATCACAGCAGAGACAAGAGCTCAT +
Preference number: 6 (lower is better)
Translates to: GPIVSWLSSHTS*SPSITAETRAH
Trigger: ATGAGCTCTTGTCTCTGCTGTGATGCTTGGGGACAAGCTTGTGTGGGAGCTTAGCCACGACACAATGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS GCA 72 bp CTTTGGGAAATGGCATCCTCCAATGCCAGATCCCAGTaGCAAAGGGCAGGTTTCTCTCGCCAAATACATGCC +
Preference number: 6 (lower is better)
Translates to: LWEMASSNARSQ*QRAGFSRQIHA
Trigger: GGCATGTATTTGGCGAGAGAAACCTGCCCTTTGGCACTGGGATCTGGCATTGGAGGATGCCATTTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 72 bp CATCACTGGAGGTGGCCTCTCCATTATTGCAAGGGGTaGCACCATGCTGTTAGCAGGGTCTTCAGGATCAAA +
Preference number: 6 (lower is better)
Translates to: HHWRWPLHYCKG*HHAVSRVFRIK
Trigger: TTTGATCCTGAAGACCCTGCTAACAGCATGGTGCCACCCCTTGCAATAATGGAGAGGCCACCTCCAGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS CCA 72 bp GTGGATACGTGCCGTCTAGCTGACCATCAGTTGGCATaGAGTGCAGAGAATGAGGCGGCCGATCTGTTATAT +
Preference number: 6 (lower is better)
Translates to: VDTCRLADHQLA*SAENEAADLLY
Trigger: ATATAACAGATCGGCCGCCTCATTCTCTGCACTCCATGCCAACTGATGGTCAGCTAGACGGCACGTATCCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
CDS CCA 72 bp GTTCCTATGGACCAGCCAAAAGGGAACAGATCCCTTTaGGAAATGGCATCCTCCAATGCCAGATCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: VPMDQPKGNRSL*EMASSNARSQC
Trigger: GCACTGGGATCTGGCATTGGAGGATGCCATTTCCCAAAGGGATCTGTTCCCTTTTGGCTGGTCCATAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CAA 90 bp CTGGAAGGTACCATTCCATATTCTGGGACCTGTCCCGTGCCTCTCTaGAGCAGCAGCCTCACTCGTCTTCCTCCAGATTTGATGAGTTCT +
Preference number: 6 (lower is better)
Translates to: LEGTIPYSGTCPVPL*SSSLTRLPPDLMSS
Trigger: AGAACTCATCAAATCTGGAGGAAGACGAGTGAGGCTGCTGCTCAAGAGAGGCACGGGACAGGTCCCAGAATATGGAATGGTACCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS CAA 90 bp GCACTGCCTGAGCCCCTAATGTGGGCTGGCTCAGGACCAGGTCCTTaGTGTCTGTTATTTCTTCTTTCATCCTCTCTCAAAGTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: ALPEPLMWAGSGPGP*CLLFLLSSSLKVVL
Trigger: CAGCACCACTTTGAGAGAGGATGAAAGAAGAAATAACAGACACAAAGGACCTGGTCCTGAGCCAGCCCACATTAGGGGCTCAGGCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 90 bp GGTCTGTTACATTTAACAATAATGGTGCTGGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGTCTGGGAGGCAGAGGTTGCGGTGAG +
Preference number: 6 (lower is better)
Translates to: GLLHLTIMVLVLLAA*GYRSNCLGGRGCGE
Trigger: CTCACCGCAACCTCTGCCTCCCAGACAATTACTACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCATTATTGTTAAATGTAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630991.2
CDS TCA 72 bp ACAATGAGGTCGCCTTCACACAGGCCAGGGCATCCCTaGATGTCAAGTATTTGTTTCACCCGCTGTCCTGTA +
Preference number: 6 (lower is better)
Translates to: TMRSPSHRPGHP*MSSICFTRCPV
Trigger: TACAGGACAGCGGGTGAAACAAATACTTGACATTCAGGGATGCCCTGGCCTGTGTGAAGGCGACCTCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS GCA 72 bp AAGTACAGGCAGATTCATCAGTGCTCAGCCAGTGGCTaGAGCTCCACTACACCTTCCCAAGTTCTCAGACAA +
Preference number: 6 (lower is better)
Translates to: KYRQIHQCSASG*SSTTPSQVLRQ
Trigger: TTGTCTGAGAACTTGGGAAGGTGTAGTGGAGCTGCAGCCACTGGCTGAGCACTGATGAATCTGCCTGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440555.2
CDS GCA 72 bp AGAATGACATGGGTGGAAGTACATAAGGAACAGGGATaGCAAGGAGGAGAGCCACCTGCTCAACAGTTGGCA +
Preference number: 6 (lower is better)
Translates to: RMTWVEVHKEQG*QGGEPPAQQLA
Trigger: TGCCAACTGTTGAGCAGGTGGCTCTCCTCCTTGGCATCCCTGTTCCTTATGTACTTCCACCCATGTCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 72 bp AGCTGGCCCTCCGGGTTCCTGCCAATGACACTCTCATaGACTTTGCTAGTCCAGTGGCTTTTCTTTTTCAAG +
Preference number: 6 (lower is better)
Translates to: SWPSGFLPMTLS*TLLVQWLFFFK
Trigger: CTTGAAAAAGAAAAGCCACTGGACTAGCAAAGTCCATGAGAGTGTCATTGGCAGGAACCCGGAGGGCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000637441.1
CDS CCA 72 bp GGCATGAGCCAAGGCAAACAGGTGTTCTCCAGAAGCTaGAAAGGCAAGGAAACTGATTCTCCTCTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: GMSQGKQVFSRS*KGKETDSPLEL
Trigger: AAGCTCCAGAGGAGAATCAGTTTCCTTGCCTTTCCAGCTTCTGGAGAACACCTGTTTGCCTTGGCTCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp GGCCTAGAGCCAAGAAAGTGGATATGCCCCAGAGTCTaGGGTCAGGCTAAATCTCTAAGTAGGGGTAGAAGG +
Preference number: 6 (lower is better)
Translates to: GLEPRKWICPRV*GQAKSLSRGRR
Trigger: CCTTCTACCCCTACTTAGAGATTTAGCCTGACCCAAGACTCTGGGGCATATCCACTTTCTTGGCTCTAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CAA 90 bp GGTCTGTTACATTTAACAATAATGGTGCTGGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGTCTTCTTCTCGCCCATCTCCCCGGA +
Preference number: 6 (lower is better)
Translates to: GLLHLTIMVLVLLAA*GYRSNCLLLAHLPG
Trigger: TCCGGGGAGATGGGCGAGAAGAAGACAATTACTACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCATTATTGTTAAATGTAACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636717.1
CDS CAA 90 bp GCTGGCAATATATGTTCATATTCTGGGACCTGTCCCGTGCCTCTCTaGAGCAGCAGCCTCACTCGTCTTCCTCCAGATTTGATGAGTTCT +
Preference number: 6 (lower is better)
Translates to: AGNICSYSGTCPVPL*SSSLTRLPPDLMSS
Trigger: AGAACTCATCAAATCTGGAGGAAGACGAGTGAGGCTGCTGCTCAAGAGAGGCACGGGACAGGTCCCAGAATATGAACATATATTGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637282.1
CDS CAA 90 bp GTGATGCTAGGTCCCATTGTGTCGTGGCTAAGCTCCCACACAAGCTaGTCCCCAAGCATCACAGCAGAGACAAGAGCTCATTTTTGTTGT +
Preference number: 6 (lower is better)
Translates to: VMLGPIVSWLSSHTS*SPSITAETRAHFCC
Trigger: ACAACAAAAATGAGCTCTTGTCTCTGCTGTGATGCTTGGGGACAAGCTTGTGTGGGAGCTTAGCCACGACACAATGGGACCTAGCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp GCCGCTGAGCTCTTTTGTTTTCCCTCCTCTCAAAGATaGAGCATGCAGCACTTCTCTCTCTCTCTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: AAELFCFPSSQR*SMQHFSLSLSV
Trigger: GACAGAGAGAGAGAGAGAGAAGTGCTGCATGCTTCATCTTTGAGAGGAGGGAAAACAAAAGAGCTCAGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000629359.2
ENST00000630991.2
CDS CCA 72 bp ACCCATGCTTGTCACTTTTCATGCACATGGAGAGACTaGAAGGTACCATTCCATATTCTGGGACCTGTCCCG +
Preference number: 6 (lower is better)
Translates to: THACHFSCTWRD*KVPFHILGPVP
Trigger: CGGGACAGGTCCCAGAATATGGAATGGTACCTTCCAGTCTCTCCATGTGCATGAAAAGTGACAAGCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS CCA 72 bp TGGGGGACCTGGCATGGAGAAATCTTTCTGTTCCTATaGACCAGCCAAAAGGGAACAGATCCCTTTGGGAAA +
Preference number: 6 (lower is better)
Translates to: WGTWHGEIFLFL*TSQKGTDPFGK
Trigger: TTTCCCAAAGGGATCTGTTCCCTTTTGGCTGGTCCATAGGAACAGAAAGATTTCTCCATGCCAGGTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 72 bp CTATATTTTGCTGTGATGCTAGGTCCCATTGTGTCGTaGCTAAGCTCCCACACAAGCTTGTCCCCAAGCATC +
Preference number: 6 (lower is better)
Translates to: LYFAVMLGPIVS*LSSHTSLSPSI
Trigger: GATGCTTGGGGACAAGCTTGTGTGGGAGCTTAGCCACGACACAATGGGACCTAGCATCACAGCAAAATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 72 bp CCAGAAGCTGGAAAGGCAAGGAAACTGATTCTCCTCTaGAGCTTTCACAAAGCTACATGGCCCTGTCAACAC +
Preference number: 6 (lower is better)
Translates to: PEAGKARKLILL*SFHKATWPCQH
Trigger: GTGTTGACAGGGCCATGTAGCTTTGTGAAAGCTCCAGAGGAGAATCAGTTTCCTTGCCTTTCCAGCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 72 bp GTCCCACACAAACATGGTAGGATAGGGTTTGTCCTGTaGATCAAATTCAGCCCGCCCCAATTTTTGTGTGGC +
Preference number: 6 (lower is better)
Translates to: VPHKHGRIGFVL*IKFSPPQFLCG
Trigger: GCCACACAAAAATTGGGGCGGGCTGAATTTGATCCACAGGACAAACCCTATCCTACCATGTTTGTGTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS CAA 72 bp AGGTCTTTATCAACAATTCCTCCTTGCTTGACACACTaGAGCCGGAGGGGGTCCTTGCAGTGTTTGATCACG +
Preference number: 6 (lower is better)
Translates to: RSLSTIPPCLTH*SRRGSLQCLIT
Trigger: CGTGATCAAACACTGCAAGGACCCCCTCCGGCTCAAGTGTGTCAAGCAAGGAGGAATTGTTGATAAAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000628997.1
ENST00000637441.1
CDS CAA 72 bp TGGCACCGTGCGGAGGTAGAGGTTGTCACGAATGATTaGCTGAAGCTCATGGTCCACAGAACCCTTTTGAAA +
Preference number: 6 (lower is better)
Translates to: WHRAEVEVVTND*LKLMVHRTLLK
Trigger: TTTCAAAAGGGTTCTGTGGACCATGAGCTTCAGCAAATCATTCGTGACAACCTCTACCTCCGCACGGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000628997.1
ENST00000636989.1
ENST00000637441.1
CDS CAA 72 bp CATTTAACAATAATGGTGCTGGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGTCTGGGAGGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: HLTIMVLVLLAA*GYRSNCLGGRG
Trigger: ACCTCTGCCTCCCAGACAATTACTACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCATTATTGTTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630991.2
CDS TCA 72 bp TCCTCTCTTCTGTTCTACTGCTTGCAGGCTGCTGAATaGGCTCTGGAAGATTATAGTGGATCCAGACTCAGG +
Preference number: 6 (lower is better)
Translates to: SSLLFYCLQAAE*ALEDYSGSRLR
Trigger: CCTGAGTCTGGATCCACTATAATCTTCCAGAGCTCATTCAGCAGCCTGCAAGCAGTAGAACAGAAGAGAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522342.3
CDS TCA 72 bp ACAGGTGTTCTCCAGAAGCTGGAAAGGCAAGGAAACTaGTTCTCCTCTGGAGCTTTCACAAAGCTACATGGC +
Preference number: 6 (lower is better)
Translates to: TGVLQKLERQGN*FSSGAFTKLHG
Trigger: GCCATGTAGCTTTGTGAAAGCTCCAGAGGAGAATCAGTTTCCTTGCCTTTCCAGCTTCTGGAGAACACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp TTATTGCCCCTGAAGACCTTCCAGTGGGACAAGATGTaGAGGTGGAAGACAGTGATACTGATGATCCTGACC +
Preference number: 6 (lower is better)
Translates to: LLPLKTFQWDKM*RWKTVILMILT
Trigger: GGTCAGGATCATCAGTATCACTGTCTTCCACCTTCACATCTTGTCCCACTGGAAGGTCTTCAGGGGCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS GCA 72 bp CCAGTGCCAAAGGGCAGGTTTCTCTCGCCAAATACATaGCCCTTGTTTACATATGGCATGGAGGTAAAAGAG +
Preference number: 6 (lower is better)
Translates to: PVPKGRFLSPNT*PLFTYGMEVKE
Trigger: CTCTTTTACCTCCATGCCATATGTAAACAAGGGGCATGTATTTGGCGAGAGAAACCTGCCCTTTGGCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS GCA 72 bp GCTTGCACTTCCACTGATGGACCCATCAAGCAGGTATaGGTTTTCTCATTGGCCTGGTGGATTTCTGAAAAG +
Preference number: 6 (lower is better)
Translates to: ACTSTDGPIKQV*VFSLAWWISEK
Trigger: CTTTTCAGAAATCCACCAGGCCAATGAGAAAACGCATACCTGCTTGATGGGTCCATCAGTGGAAGTGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS GCA 72 bp CTCAAAAGGGAACCCTGGAGAGGTGAAGGAAGAATTTaGAGCTGCTCTTGTTGTGTCTGGGCTCTTAGAACA +
Preference number: 6 (lower is better)
Translates to: LKREPWRGEGRI*SCSCCVWALRT
Trigger: TGTTCTAAGAGCCCAGACACAACAAGAGCAGCTGCAAATTCTTCCTTCACCTCTCCAGGGTTCCCTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS CCA 72 bp CAATGGGTCTGGTTCCTCATTGTCTTCAGGTTTAGTTaGCTTTGTGTCATCCATCTGCTCCTTCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: QWVWFLIVFRFS*LCVIHLLLQLL
Trigger: GAGGAGCTGAAGGAGCAGATGGATGACACAAAGCCAACTAAACCTGAAGACAATGAGGAACCAGACCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636717.1
ENST00000637441.1
ENST00000637486.1
CDS CCA 72 bp GGATCATGTTCTTATGGCAGAGGTACAGGCTGGCTTTaGTTGCACTTGACCTTCCTCTCTCAAGTTGTCCTT +
Preference number: 6 (lower is better)
Translates to: GSCSYGRGTGWL*LHLTFLSQVVL
Trigger: AAGGACAACTTGAGAGAGGAAGGTCAAGTGCAACCAAAGCCAGCCTGTACCTCTGCCATAAGAACATGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 72 bp TGTACTCTTGACAGAGGGCTGATCCTGAACAAGGTGTaGCATAGAGGAAAGACTAGTGGTGAGAGTCAAGAG +
Preference number: 6 (lower is better)
Translates to: CTLDRGLILNKV*HRGKTSGESQE
Trigger: CTCTTGACTCTCACCACTAGTCTTTCCTCTATGCCACACCTTGTTCAGGATCAGCCCTCTGTCAAGAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp TGGATCATGTTCTTATGGCAGAGGTACAGGCTGGCTTaGGTTGCACTTGACCTTCCTCTCTCAAGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: WIMFLWQRYRLA*VALDLPLSSCP
Trigger: AGGACAACTTGAGAGAGGAAGGTCAAGTGCAACCAAAGCCAGCCTGTACCTCTGCCATAAGAACATGATCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 90 bp AAGCTTGTCCCCAAGCATCACAGCAGAGACAAGAGCTCATTTTTGTaGTCCTTCACCTTTCTCAGGTTGTTCTTCCTCCTTGAAGCTCCC +
Preference number: 6 (lower is better)
Translates to: KLVPKHHSRDKSSFL*SFTFLRLFFLLEAP
Trigger: GGGAGCTTCAAGGAGGAAGAACAACCTGAGAAAGGTGAAGGACAACAAAAATGAGCTCTTGTCTCTGCTGTGATGCTTGGGGACAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 90 bp TCTTCCTCTTCCTCCTCAGGAGGCTCTATACTGGCTTTCTCCATGTaGCTCACTGATTTATTCCTCTTCCGTTTTCCTTCAGCACTTGGA +
Preference number: 6 (lower is better)
Translates to: SSSSSSGGSILAFSM*LTDLFLFRFPSALG
Trigger: TCCAAGTGCTGAAGGAAAACGGAAGAGGAATAAATCAGTGAGCAACATGGAGAAAGCCAGTATAGAGCCTCCTGAGGAGGAAGAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000635863.1
ENST00000636717.1
ENST00000637441.1
ENST00000637486.1
ENST00000637728.1
CDS CAA 90 bp CAAAGTATTGGCCTAGAGCCAAGAAAGTGGATATGCCCCAGAGTCTaGGGTCAGGCTAAATCTCTAAGTAGGGGTAGAAGGGTTCTCATT +
Preference number: 6 (lower is better)
Translates to: QSIGLEPRKWICPRV*GQAKSLSRGRRVLI
Trigger: AATGAGAACCCTTCTACCCCTACTTAGAGATTTAGCCTGACCCAAGACTCTGGGGCATATCCACTTTCTTGGCTCTAGGCCAATACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS TCA 72 bp TCATTGGCCTGGTGGATTTCTGAAAAGAAGTGTTCTTaGGAGTTCAAAGGCACTCCTTCCCAGATAGCTGCC +
Preference number: 6 (lower is better)
Translates to: SLAWWISEKKCS*EFKGTPSQIAA
Trigger: GGCAGCTATCTGGGAAGGAGTGCCTTTGAACTCTCAAGAACACTTCTTTTCAGAAATCCACCAGGCCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp AGACCGGTCTATATTGGGAATGGCTTGCACTTCCACTaGTGGACCCATCAAGCAGGTATGCGTTTTCTCATT +
Preference number: 6 (lower is better)
Translates to: RPVYIGNGLHFH*WTHQAGMRFLI
Trigger: AATGAGAAAACGCATACCTGCTTGATGGGTCCATCAGTGGAAGTGCAAGCCATTCCCAATATAGACCGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp TGTGACCCGTGCTGGTGTCAGTTTTACAGTCATACATaGTCAGAGGTGGCATTTCTGAAACCTTCCAGCCAT +
Preference number: 6 (lower is better)
Translates to: CDPCWCQFYSHT*SEVAFLKPSSH
Trigger: ATGGCTGGAAGGTTTCAGAAATGCCACCTCTGATCATGTATGACTGTAAAACTGACACCAGCACGGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS GCA 72 bp ACTGTCCTGATGCTGCAGAAATGTAGGGCTATATTTTaGTGTGATGCTAGGTCCCATTGTGTCGTGGCTAAG +
Preference number: 6 (lower is better)
Translates to: TVLMLQKCRAIF*CDARSHCVVAK
Trigger: CTTAGCCACGACACAATGGGACCTAGCATCACAGCAAAATATAGCCCTACATTTCTGCAGCATCAGGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 72 bp ATATGTTTCATAGTTGTGTCTTCCATTGACCATCACTaGAGGTGGCCTCTCCATTATTGCAAGGGGTGGCAC +
Preference number: 6 (lower is better)
Translates to: ICFIVVSSIDHH*RWPLHYCKGWH
Trigger: GTGCCACCCCTTGCAATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGAAGACACAACTATGAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS CCA 72 bp GCACCTTTCACAATGGTTAAGGTCATAAGTTCAGCTTaGGTGGCCCCAGATGAAGCCATAGACACATTGTCA +
Preference number: 6 (lower is better)
Translates to: APFTMVKVISSA*VAPDEAIDTLS
Trigger: TGACAATGTGTCTATGGCTTCATCTGGGGCCACCCAAGCTGAACTTATGACCTTAACCATTGTGAAAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
CDS CCA 72 bp AATACTTGCCAGAGGAATCCATTCGAAAACTGGTCCTaGGTGGCACTTGTTGCCTACTTTCATAAATGGCCC +
Preference number: 6 (lower is better)
Translates to: NTCQRNPFENWS*VALVAYFHKWP
Trigger: GGGCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAATGGATTCCTCTGGCAAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520379.2
CDS CCA 72 bp TCACCAATTCAGAGGAATCCATTCGAAAACTGGTCCTaGGTGGCACTTGTTGCCTACTTTCATAAATGGCCC +
Preference number: 6 (lower is better)
Translates to: SPIQRNPFENWS*VALVAYFHKWP
Trigger: GGGCCATTTATGAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAATGGATTCCTCTGAATTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524316.5
CDS CCA 72 bp ACTGATGGATCATGTTCTTATGGCAGAGGTACAGGCTaGCTTTGGTTGCACTTGACCTTCCTCTCTCAAGTT +
Preference number: 6 (lower is better)
Translates to: TDGSCSYGRGTG*LWLHLTFLSQV
Trigger: AACTTGAGAGAGGAAGGTCAAGTGCAACCAAAGCCAGCCTGTACCTCTGCCATAAGAACATGATCCATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp CATTTAACAATAATGGTGCTGGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGTCTTCTTCTCGCCCAT +
Preference number: 6 (lower is better)
Translates to: HLTIMVLVLLAA*GYRSNCLLLAH
Trigger: ATGGGCGAGAAGAAGACAATTACTACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCATTATTGTTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636717.1
CDS CAA 72 bp TCATGTTCTTATGGCAGAGGTACAGGCTGGCTTTGGTaGCACTTGACCTTCCTCTCTCAAGTTGTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: SCSYGRGTGWLW*HLTFLSQVVLS
Trigger: AGAAAGGACAACTTGAGAGAGGAAGGTCAAGTGCAACCAAAGCCAGCCTGTACCTCTGCCATAAGAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp ACGACAACAATAAAAACTTGTCCTGATGTTGCTGGTTaGGACAATGGTGGAAGGGGGCATGAGCCAAGGCAA +
Preference number: 6 (lower is better)
Translates to: TTTIKTCPDVAG*DNGGRGHEPRQ
Trigger: TTGCCTTGGCTCATGCCCCCTTCCACCATTGTCCAAACCAGCAACATCAGGACAAGTTTTTATTGTTGTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp ATTGCATTCGGCCCACTAATCACACACACTCCAGCATaGAGTTTTCAGCAGGGATGCAATGATATCCTCAAC +
Preference number: 6 (lower is better)
Translates to: IAFGPLITHTPA*SFQQGCNDILN
Trigger: GTTGAGGATATCATTGCATCCCTGCTGAAAACTTCATGCTGGAGTGTGTGTGATTAGTGGGCCGAATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp GGCATCCTAGCCTGTAGCGAGGTGAGGGGAAAGTACTaGGTCTCATTCTATGCCTTAGAGAAATATTGCATT +
Preference number: 6 (lower is better)
Translates to: GILACSEVRGKY*VSFYALEKYCI
Trigger: AATGCAATATTTCTCTAAGGCATAGAATGAGACTCAGTACTTTCCCCTCACCTCGCTACAGGCTAGGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp TGCCAAGGAGGAGAGCCACCTGCTCAACAGTTGGCATaGCTAATCTCAATGATTTGTCATGAAAACCTGTGT +
Preference number: 6 (lower is better)
Translates to: CQGGEPPAQQLA*LISMICHENLC
Trigger: ACACAGGTTTTCATGACAAATCATTGAGATTAGTCATGCCAACTGTTGAGCAGGTGGCTCTCCTCCTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS GCA 72 bp CTTCAAAGTATTGGCCTAGAGCCAAGAAAGTGGATATaGCCCAGAGTCTTGGGTCAGGCTAAATCTCTAAGT +
Preference number: 6 (lower is better)
Translates to: LQSIGLEPRKWI*PRVLGQAKSLS
Trigger: ACTTAGAGATTTAGCCTGACCCAAGACTCTGGGGCATATCCACTTTCTTGGCTCTAGGCCAATACTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS GCA 72 bp AACAGCTTTCAAATTTATGTCCCTAGCTCCAAGCTCTaGACTGGACTCCAGATTCATGTATCCAGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: NSFQIYVPSSKL*TGLQIHVSSCR
Trigger: TCTGCAGCTGGATACATGAATCTGGAGTCCAGTGCAGAGCTTGGAGCTAGGGACATAAATTTGAAAGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635863.1
CDS CCA 72 bp AATATGGGGACCCATGCTTGTCACTTTTCATGCACATaGAGAGACTGGAAGGTACCATTCCATATTCTGGGA +
Preference number: 6 (lower is better)
Translates to: NMGTHACHFSCT*RDWKVPFHILG
Trigger: TCCCAGAATATGGAATGGTACCTTCCAGTCTCTCCATGTGCATGAAAAGTGACAAGCATGGGTCCCCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS CCA 72 bp CCTTATAATCTGGACCAGAGGAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTTTTTCATAAATGGCCC +
Preference number: 6 (lower is better)
Translates to: PYNLDQRNPFEN*SWVALVFHKWP
Trigger: GGGCCATTTATGAAAAACAAGTGCCACCCAGGACCAGTTTTCGAATGGATTCCTCTGGTCCAGATTATAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628361.1
CDS CCA 72 bp CTGATGGACCCATCAAGCAGGTATGCGTTTTCTCATTaGCCTGGTGGATTTCTGAAAAGAAGTGTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: LMDPSSRYAFSH*PGGFLKRSVLE
Trigger: CTCAAGAACACTTCTTTTCAGAAATCCACCAGGCCAATGAGAAAACGCATACCTGCTTGATGGGTCCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp CATTTAACAATAATGGTGCTGGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGTCTTCATAAGTCCCAC +
Preference number: 6 (lower is better)
Translates to: HLTIMVLVLLAA*GYRSNCLHKSH
Trigger: GTGGGACTTATGAAGACAATTACTACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCATTATTGTTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
ENST00000637486.1
CDS CAA 72 bp TCCTACCTGCCCTACCGTTCCTCAGCTAACATCTCTTaGCCAATTTTCTCCATGTTGAAACACTTACCCTTC +
Preference number: 6 (lower is better)
Translates to: SYLPYRSSANIS*PIFSMLKHLPF
Trigger: GAAGGGTAAGTGTTTCAACATGGAGAAAATTGGCAAAGAGATGTTAGCTGAGGAACGGTAGGGCAGGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp CCCAAGCATCACAGCAGAGACAAGAGCTCATTTTTGTaGTCCTTCACCTTTCTCAGGTTGTTCTTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: PKHHSRDKSSFL*SFTFLRLFFLL
Trigger: AAGGAGGAAGAACAACCTGAGAAAGGTGAAGGACAACAAAAATGAGCTCTTGTCTCTGCTGTGATGCTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 90 bp GGTCTGTTACATTTAACAATAATGGTGCTGGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGTCTTCATAAGTCCCACTTTCTAGGA +
Preference number: 6 (lower is better)
Translates to: GLLHLTIMVLVLLAA*GYRSNCLHKSHFLG
Trigger: TCCTAGAAAGTGGGACTTATGAAGACAATTACTACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCATTATTGTTAAATGTAACAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000637441.1
ENST00000637486.1
CDS CAA 90 bp GGTCTGTTACATTTAACAATAATGGTGCTGGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGTCAAGACATCCACATTGCAAATCCA +
Preference number: 6 (lower is better)
Translates to: GLLHLTIMVLVLLAA*GYRSNCQDIHIANP
Trigger: TGGATTTGCAATGTGGATGTCTTGACAATTACTACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCATTATTGTTAAATGTAACAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635863.1
ENST00000637728.1
CDS CAA 90 bp GAGAAAGTAGAGGGCCCAACTGTTAACGTGGCAAACCCAGCTTATTaGATGATGTTTGGTGAACTTTGCATGTATGATAGGCTAAGCAGC +
Preference number: 6 (lower is better)
Translates to: EKVEGPTVNVANPAY*MMFGELCMYDRLSS
Trigger: GCTGCTTAGCCTATCATACATGCAAAGTTCACCAAACATCATCAAATAAGCTGGGTTTGCCACGTTAACAGTTGGGCCCTCTACTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS TCA 72 bp AGGTTTAGCCTTTTTCGCAAGTCGTGGATCCAGCCATaGTGTTGTCTTTGTGTTATGGTGGTTCTAAGTAGC +
Preference number: 6 (lower is better)
Translates to: RFSLFRKSWIQP*CCLCVMVVLSS
Trigger: GCTACTTAGAACCACCATAACACAAAGACAACATCATGGCTGGATCCACGACTTGCGAAAAAGGCTAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000519748.5
ENST00000520379.2
ENST00000634996.1
ENST00000637249.1
ENST00000637282.1
CDS CCA 72 bp CTGAACAATACTTGCCAGAGGAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTTGCCTACTTTCATAAA +
Preference number: 6 (lower is better)
Translates to: LNNTCQRNPFEN*SWVALVAYFHK
Trigger: TTTATGAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAATGGATTCCTCTGGCAAGTATTGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520379.2
CDS CCA 72 bp CATGTGGTTAACTTAGGACTAGATTCTAAGGCCAAATaGATGCTGCAGCTTCAAAGTATTGGCCTAGAGCCA +
Preference number: 6 (lower is better)
Translates to: HVVNLGLDSKAK*MLQLQSIGLEP
Trigger: TGGCTCTAGGCCAATACTTTGAAGCTGCAGCATCCATTTGGCCTTAGAATCTAGTCCTAAGTTAACCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CAA 72 bp CCAAAGGGCAGGTTTCTCTCGCCAAATACATGCCCCTaGTTTACATATGGCATGGAGGTAAAAGAGAAGAAA +
Preference number: 6 (lower is better)
Translates to: PKGRFLSPNTCP*FTYGMEVKEKK
Trigger: TTTCTTCTCTTTTACCTCCATGCCATATGTAAACAAGGGGCATGTATTTGGCGAGAGAAACCTGCCCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CAA 72 bp CATCAGAGGAGAGAATGGCTATCACTACTCCAACAGTaGGCAAAGGCATTGGTAGGATACTACATGATACAC +
Preference number: 6 (lower is better)
Translates to: HQRREWLSLLQQ*AKALVGYYMIH
Trigger: GTGTATCATGTAGTATCCTACCAATGCCTTTGCCAACTGTTGGAGTAGTGATAGCCATTCTCTCCTCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp CATTTAACAATAATGGTGCTGGTTCTGCTGGCGGCTTaGGGGTACCGTAGTAATTGTCAAGACATCCACATT +
Preference number: 6 (lower is better)
Translates to: HLTIMVLVLLAA*GYRSNCQDIHI
Trigger: AATGTGGATGTCTTGACAATTACTACGGTACCCCAAAGCCGCCAGCAGAACCAGCACCATTATTGTTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635863.1
ENST00000637728.1
CDS CAA 72 bp GAGGGCCCAACTGTTAACGTGGCAAACCCAGCTTATTaGATGATGTTTGGTGAACTTTGCATGTATGATAGG +
Preference number: 6 (lower is better)
Translates to: EGPTVNVANPAY*MMFGELCMYDR
Trigger: CCTATCATACATGCAAAGTTCACCAAACATCATCAAATAAGCTGGGTTTGCCACGTTAACAGTTGGGCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS CAA 90 bp TTAGAGAGCAGGGGCAGAAATAGCAAGTATTTAATCTGTCTAGAATaGATCCTGGGGGACCTGGCATGGAGAAATCTTTCTGTTCCTATG +
Preference number: 6 (lower is better)
Translates to: LESRGRNSKYLICLE*ILGDLAWRNLSVPM
Trigger: CATAGGAACAGAAAGATTTCTCCATGCCAGGTCCCCCAGGATCAATTCTAGACAGATTAAATACTTGCTATTTCTGCCCCTGCTCTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CAA 90 bp GTGCAATGGAAAGTCCTGCCCACTCATATAAAAGTGGCAGGAATTTaGATAGCCAAGCCAAGAAGCACTGTGAATCAGAAGACTTTACTG +
Preference number: 6 (lower is better)
Translates to: VQWKVLPTHIKVAGI*IAKPRSTVNQKTLL
Trigger: CAGTAAAGTCTTCTGATTCACAGTGCTTCTTGGCTTGGCTATCAAAATTCCTGCCACTTTTATATGAGTGGGCAGGACTTTCCATTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp GCTCATGGTCCACAGAACCCTTTTGAAATCGTAAGTTaGGGTAGTGACGAAGGTCTTTATCAACAATTCCTC +
Preference number: 6 (lower is better)
Translates to: AHGPQNPFEIVS*GSDEGLYQQFL
Trigger: GAGGAATTGTTGATAAAGACCTTCGTCACTACCTCAACTTACGATTTCAAAAGGGTTCTGTGGACCATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000522391.3
ENST00000628997.1
ENST00000636989.1
ENST00000637441.1
CDS TCA 72 bp AGAAATTCATTTGGGGCTTGTAATAGGTGGGACAGCTaGTTCAAAGAAGTACAGGCAGATTCATCAGTGCTC +
Preference number: 6 (lower is better)
Translates to: RNSFGACNRWDS*FKEVQADSSVL
Trigger: GAGCACTGATGAATCTGCCTGTACTTCTTTGAATCAGCTGTCCCACCTATTACAAGCCCCAAATGAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440555.2
CDS TCA 72 bp TTCACTGCCAAAGAATTCTCTCTCTTGAGTAAAGAATaGCATGGGTGGAAGTACATAAGGAACAGGGATGCC +
Preference number: 6 (lower is better)
Translates to: FTAKEFSLLSKE*HGWKYIRNRDA
Trigger: GGCATCCCTGTTCCTTATGTACTTCCACCCATGTCATTCTTTACTCAAGAGAGAGAATTCTTTGGCAGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp AGGGGTCCTTTCTCAGTCTTCGTCTTAGCTGAGCTGTaGACAGCATTTGAAACAGCTGGTAAGTTTCTTAAA +
Preference number: 6 (lower is better)
Translates to: RGPFSVFVLAEL*TAFETAGKFLK
Trigger: TTTAAGAAACTTACCAGCTGTTTCAAATGCTGTTCACAGCTCAGCTAAGACGAAGACTGAGAAAGGACCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637728.1
CDS GCA 72 bp AGTAGAAATATGGGGACCCATGCTTGTCACTTTTCATaGACATGGAGAGACTGGAAGGTACCATTCCATATT +
Preference number: 6 (lower is better)
Translates to: SRNMGTHACHFS*TWRDWKVPFHI
Trigger: AATATGGAATGGTACCTTCCAGTCTCTCCATGTGCATGAAAAGTGACAAGCATGGGTCCCCATATTTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522391.3
ENST00000626691.2
ENST00000629359.2
CDS CAA 72 bp AAAGTCCTGCCCACTCATATAAAAGTGGCAGGAATTTaGATAGCCAAGCCAAGAAGCACTGTGAATCAGAAG +
Preference number: 6 (lower is better)
Translates to: KVLPTHIKVAGI*IAKPRSTVNQK
Trigger: CTTCTGATTCACAGTGCTTCTTGGCTTGGCTATCAAAATTCCTGCCACTTTTATATGAGTGGGCAGGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp TGTACTCCAAATATGTTTCATAGTTGTGTCTTCCATTaGCCATCACTGGAGGTGGCCTCTCCATTATTGCAA +
Preference number: 6 (lower is better)
Translates to: CTPNMFHSCVFH*PSLEVASPLLQ
Trigger: TTGCAATAATGGAGAGGCCACCTCCAGTGATGGTCAATGGAAGACACAACTATGAAACATATTTGGAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS GCA 72 bp AATAGCTATGCGGGGTTGCAATATTTTGATTACCTCTaGCAGACTGATAAGCACTTCCACTGTAAGAATGAC +
Preference number: 6 (lower is better)
Translates to: NSYAGLQYFDYL*QTDKHFHCKND
Trigger: GTCATTCTTACAGTGGAAGTGCTTATCAGTCTGGCAGAGGTAATCAAAATATTGCAACCCCGCATAGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS GCA 72 bp GGGTCATTATTAGGAGAATCAATAGCTATGCGGGGTTaGAATATTTTGATTACCTCTGCCAGACTGATAAGC +
Preference number: 6 (lower is better)
Translates to: GSLLGESIAMRG*NILITSARLIS
Trigger: GCTTATCAGTCTGGCAGAGGTAATCAAAATATTGCAACCCCGCATAGCTATTGATTCTCCTAATAATGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS GCA 72 bp TCTCCAAATGCCCTGTGTTTCCATGTGTCTTGGACTTaGTGGCACCACACTAAAATAGCTAATAGTTTAGAA +
Preference number: 6 (lower is better)
Translates to: SPNALCFHVSWT*WHHTKIANSLE
Trigger: TTCTAAACTATTAGCTATTTTAGTGTGGTGCCAGCAAGTCCAAGACACATGGAAACACAGGGCATTTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636989.1
CDS GCA 72 bp TTCTTGAGAGTTCAAAGGCACTCCTTCCCAGATAGCTaGCTTAGAATGATAAGAAAGTCCCAACAGAAAGTA +
Preference number: 6 (lower is better)
Translates to: FLRVQRHSFPDS*LRMIRKSQQKV
Trigger: TACTTTCTGTTGGGACTTTCTTATCATTCTAAGGCAGCTATCTGGGAAGGAGTGCCTTTGAACTCTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 72 bp TTTTCATCACCAATTCAGAGGAATCCATTCGAAAACTaGTCCTGGGTGGCACTTGTTGCCTACTTTCATAAA +
Preference number: 6 (lower is better)
Translates to: FSSPIQRNPFEN*SWVALVAYFHK
Trigger: TTTATGAAAGTAGGCAACAAGTGCCACCCAGGACCAGTTTTCGAATGGATTCCTCTGAATTGGTGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524316.5
CDS CCA 72 bp TTTATTGCTGAGCCAGTGTTTGTCTTACCTCCTCGATaGATAATCAAAGAAGTTTCACTTCCAATGGGACAG +
Preference number: 6 (lower is better)
Translates to: FIAEPVFVLPPR*IIKEVSLPMGQ
Trigger: CTGTCCCATTGGAAGTGAAACTTCTTTGATTATCCATCGAGGAGGTAAGACAAACACTGGCTCAGCAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000628781.1
ENST00000630991.2
ENST00000636039.1
CDS CCA 72 bp AACATAAAAATATTAATACTGCCCATTGTACTCACATaGCACCGTGCGGAGGTAGAGGTTGTCACGAATGAT +
Preference number: 6 (lower is better)
Translates to: NIKILILPIVLT*HRAEVEVVTND
Trigger: ATCATTCGTGACAACCTCTACCTCCGCACGGTGCCATGTGAGTACAATGGGCAGTATTAATATTTTTATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628997.1
CDS CCA 72 bp CCAAATGCCCTGTGTTTCCATGTGTCTTGGACTTGCTaGCACCACACTAAAATAGCTAATAGTTTAGAAATC +
Preference number: 6 (lower is better)
Translates to: PNALCFHVSWTC*HHTKIANSLEI
Trigger: GATTTCTAAACTATTAGCTATTTTAGTGTGGTGCCAGCAAGTCCAAGACACATGGAAACACAGGGCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636989.1
CDS CCA 72 bp TATATAAGACTCAGGATAGCATGGCAGCCACACATATaGATTGTGGACCAAGTTTTCCTACATATGAACTCC +
Preference number: 6 (lower is better)
Translates to: YIRLRIAWQPHI*IVDQVFLHMNS
Trigger: GGAGTTCATATGTAGGAAAACTTGGTCCACAATCCATATGTGTGGCTGCCATGCTATCCTGAGTCTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635863.1
CDS CCA 72 bp AAGAATGGTCCTACAAGGCTTAATTCACTTTTGATATaGATTCTAACCCAGCAATGCTCATGGGATGTCAGC +
Preference number: 6 (lower is better)
Translates to: KNGPTRLNSLLI*ILTQQCSWDVS
Trigger: GCTGACATCCCATGAGCATTGCTGGGTTAGAATCCATATCAAAAGTGAATTAAGCCTTGTAGGACCATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS CAA 72 bp TTAGGAGAATCAATAGCTATGCGGGGTTGCAATATTTaGATTACCTCTGCCAGACTGATAAGCACTTCCACT +
Preference number: 6 (lower is better)
Translates to: LGESIAMRGCNI*ITSARLISTST
Trigger: AGTGGAAGTGCTTATCAGTCTGGCAGAGGTAATCAAAATATTGCAACCCCGCATAGCTATTGATTCTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CAA 90 bp TACGGTACTGGTTTGTTTTGGATTTGTAACACAATAATTTCACATTaGTGTACAACACTTTACCACTCCAGGACTCAGCCTCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: YGTGLFWICNTIISH*CTTLYHSRTQPPHL
Trigger: CAGATGAGGAGGCTGAGTCCTGGAGTGGTAAAGTGTTGTACACAAATGTGAAATTATTGTGTTACAAATCCAAAACAAACCAGTACCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp AACAACATGGATGGACCTAGAGGACATTATATTGAGTaGTTTAAGCCAGGCACAGAGAGACAAATACGACAT +
Preference number: 6 (lower is better)
Translates to: NNMDGPRGHYIE*FKPGTERQIRH
Trigger: ATGTCGTATTTGTCTCTCTGTGCCTGGCTTAAATCACTCAATATAATGTCCTCTAGGTCCATCCATGTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS TCA 72 bp ACTGATAAGCACTTCCACTGTAAGAATGACCATGGATaGCTCAATTTTCGCATTCCTCTGTCAACTTTCTGT +
Preference number: 6 (lower is better)
Translates to: TDKHFHCKNDHG*LNFRIPLSTFC
Trigger: ACAGAAAGTTGACAGAGGAATGCGAAAATTGAGTCATCCATGGTCATTCTTACAGTGGAAGTGCTTATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS TCA 72 bp CACACATATGGATTGTGGACCAAGTTTTCCTACATATaGACTCCAGTTACTAGGCAAAGTATCTCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: HTYGLWTKFSYI*TPVTRQSISVS
Trigger: GGAAACTGAGATACTTTGCCTAGTAACTGGAGTTCATATGTAGGAAAACTTGGTCCACAATCCATATGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635863.1
CDS TCA 72 bp CAGAGATTTTGGCTTATGTTTCAGTGCTTCTTCCACTaGGGCATATTTCCTGCATTCAAGGTTTTGGTTTCA +
Preference number: 6 (lower is better)
Translates to: QRFWLMFQCFFH*GIFPAFKVLVS
Trigger: TGAAACCAAAACCTTGAATGCAGGAAATATGCCTCAGTGGAAGAAGCACTGAAACATAAGCCAAAATCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS CCA 72 bp GACACAAACTTCATTAATATAGACAATGACATCACCTaGGATCTTGTTACAGGGCGTTTTCTGATCAGGACA +
Preference number: 6 (lower is better)
Translates to: DTNFINIDNDIT*DLVTGRFLIRT
Trigger: TGTCCTGATCAGAAAACGCCCTGTAACAAGATCCCAGGTGATGTCATTGTCTATATTAATGAAGTTTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636936.1
CDS CAA 72 bp TTTGCAACAACATGGATGGACCTAGAGGACATTATATaGAGTGATTTAAGCCAGGCACAGAGAGACAAATAC +
Preference number: 6 (lower is better)
Translates to: FATTWMDLEDII*SDLSQAQRDKY
Trigger: GTATTTGTCTCTCTGTGCCTGGCTTAAATCACTCAATATAATGTCCTCTAGGTCCATCCATGTTGTTGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CAA 72 bp AGGGTCATTATTAGGAGAATCAATAGCTATGCGGGGTaGCAATATTTTGATTACCTCTGCCAGACTGATAAG +
Preference number: 6 (lower is better)
Translates to: RVIIRRINSYAG*QYFDYLCQTDK
Trigger: CTTATCAGTCTGGCAGAGGTAATCAAAATATTGCAACCCCGCATAGCTATTGATTCTCCTAATAATGACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CAA 72 bp ACATCAACCAATGTAAGCGTGAACACATCATTTTCTTaGCACTCTTCTGGAGGTTTAGCCTTTTTCGCAAGT +
Preference number: 6 (lower is better)
Translates to: TSTNVSVNTSFS*HSSGGLAFFAS
Trigger: ACTTGCGAAAAAGGCTAAACCTCCAGAAGAGTGCAAAGAAAATGATGTGTTCACGCTTACATTGGTTGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637136.1
CDS CAA 90 bp TTCCTGCATTCAAGGTTTTGGTTTCATTTGCTGTTCACATTTGATTaGGGTACACAAGGAGATTTCTATTGTGGTAGAGCTTTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: FLHSRFWFHLLFTFD*GTQGDFYCGRALEF
Trigger: GAACTCCAAAGCTCTACCACAATAGAAATCTCCTTGTGTACCCAAATCAAATGTGAACAGCAAATGAAACCAAAACCTTGAATGCAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS TCA 72 bp TTCCCTCAGATCATATTCATAGAGTCAAACTCATGGTaGTTAAGAACCATGGCGGCCATTCACATGAATTTA +
Preference number: 6 (lower is better)
Translates to: FPQIIFIESNSW*LRTMAAIHMNL
Trigger: TAAATTCATGTGAATGGCCGCCATGGTTCTTAATCACCATGAGTTTGACTCTATGAATATGATCTGAGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440555.2
CDS TCA 72 bp AAATGGAAGACGTTTTGTTCACAGAACTGTGAGTACTaGACAATACTTGCCAGAGGAATCCATTCGAAAACT +
Preference number: 6 (lower is better)
Translates to: KWKTFCSQNCEY*TILARGIHSKT
Trigger: AGTTTTCGAATGGATTCCTCTGGCAAGTATTGTTCAGTACTCACAGTTCTGTGAACAAAACGTCTTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520379.2
CDS TCA 72 bp TACAAAGTTTCAGTTAGAAGGAGGAATCGGTTCTGGTaGTCTATTACTCAGCATGGTGACTATAGTCATCAT +
Preference number: 6 (lower is better)
Translates to: YKVSVRRRNRFW*SITQHGDYSHH
Trigger: ATGATGACTATAGTCACCATGCTGAGTAATAGATCACCAGAACCGATTCCTCCTTCTAACTGAAACTTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS TCA 72 bp GTCATTGTGCTTCCAACATGTGAAGGTAAATCTGCATaGAAGAGGTACAACTCCCATTTACAGGTAAGAAAA +
Preference number: 6 (lower is better)
Translates to: VIVLPTCEGKSA*KRYNSHLQVRK
Trigger: TTTTCTTACCTGTAAATGGGAGTTGTACCTCTTTCATGCAGATTTACCTTCACATGTTGGAAGCACAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS GCA 72 bp ACCAATAGGAACAGACTGGAAAAGTTTGACAACATCTaGATGAGTGTGTCCAAGGACACAAACTTCATTAAT +
Preference number: 6 (lower is better)
Translates to: TNRNRLEKFDNI*MSVSKDTNFIN
Trigger: ATTAATGAAGTTTGTGTCCTTGGACACACTCATGCAGATGTTGTCAAACTTTTCCAGTCTGTTCCTATTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354212.9
ENST00000419488.5
ENST00000519748.5
ENST00000520379.2
ENST00000522391.3
ENST00000535697.5
ENST00000626691.2
ENST00000628781.1
ENST00000628980.2
ENST00000629359.2
ENST00000630991.2
ENST00000636039.1
ENST00000636178.1
ENST00000636717.1
ENST00000637282.1
ENST00000637441.1
ENST00000637486.1
CDS CCA 72 bp TTTTACTGCTTGGCAGAGGGTTCATCTCTACTAAGGTaGGTTATAAAGACAGTAACTGGTGAATTCCATTTA +
Preference number: 6 (lower is better)
Translates to: FYCLAEGSSLLR*VIKTVTGEFHL
Trigger: TAAATGGAATTCACCAGTTACTGTCTTTATAACCCACCTTAGTAGAGATGAACCCTCTGCCAAGCAGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 72 bp TCACTTTTGATATGGATTCTAACCCAGCAATGCTCATaGGATGTCAGCACAGAAATGGTTGTGATTGAAAAT +
Preference number: 6 (lower is better)
Translates to: SLLIWILTQQCS*DVSTEMVVIEN
Trigger: ATTTTCAATCACAACCATTTCTGTGCTGACATCCCATGAGCATTGCTGGGTTAGAATCCATATCAAAAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS CAA 90 bp TCCATGTTGAAACACTTACCCTTCAACATCTATTCTGTTCAATATTaGAAATACTCCGGGTCTGCATCTATACCACTCCTTTGTCCATTA +
Preference number: 6 (lower is better)
Translates to: SMLKHLPFNIYSVQY*KYSGSASIPLLCPL
Trigger: TAATGGACAAAGGAGTGGTATAGATGCAGACCCGGAGTATTTCAAATATTGAACAGAATAGATGTTGAAGGGTAAGTGTTTCAACATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 90 bp CCCTACCGTTCCTCAGCTAACATCTCTTTGCCAATTTTCTCCATGTaGAAACACTTACCCTTCAACATCTATTCTGTTCAATATTTGAAA +
Preference number: 6 (lower is better)
Translates to: PYRSSANISLPIFSM*KHLPFNIYSVQYLK
Trigger: TTTCAAATATTGAACAGAATAGATGTTGAAGGGTAAGTGTTTCAACATGGAGAAAATTGGCAAAGAGATGTTAGCTGAGGAACGGTAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 90 bp TTGTCAATGCTCATGAACAACTCGGAAGACAAAGCAATTTCACTATaGAACAATCCGATCTTTCATGCTCATGCAAAGGATGAATATGGA +
Preference number: 6 (lower is better)
Translates to: LSMLMNNSEDKAISL*NNPIFHAHAKDEYG
Trigger: TCCATATTCATCCTTTGCATGAGCATGAAAGATCGGATTGTTCAATAGTGAAATTGCTTTGTCTTCCGAGTTGTTCATGAGCATTGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 90 bp CATATTTCCTGCATTCAAGGTTTTGGTTTCATTTGCTGTTCACATTaGATTTGGGTACACAAGGAGATTTCTATTGTGGTAGAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: HISCIQGFGFICCSH*IWVHKEISIVVELW
Trigger: CCAAAGCTCTACCACAATAGAAATCTCCTTGTGTACCCAAATCAAATGTGAACAGCAAATGAAACCAAAACCTTGAATGCAGGAAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676103.1
CDS TCA 72 bp AGCAGCATTACAAAGTTAACACAACCTCCTGTTCCATaGATAGTAGGTAGGAAAATAACACCCCTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: SSITKLTQPPVP*IVGRKITPLSL
Trigger: TAAAGAAAGGGGTGTTATTTTCCTACCTACTATTCATGGAACAGGAGGTTGTGTTAACTTTGTAATGCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS TCA 72 bp CAGTACCTAGTTGATGGGACAGTTAAGATAGTTAAATaGACTAATACCTATAATGAGGTTAGGCCACTCCTA +
Preference number: 6 (lower is better)
Translates to: QYLVDGTVKIVK*TNTYNEVRPLL
Trigger: TAGGAGTGGCCTAACCTCATTATAGGTATTAGTTCATTTAACTATCTTAACTGTCCCATCAACTAGGTACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635863.1
CDS TCA 72 bp AAGAACCCACAGATTAGGGTTTGGAACAGCTTTTCCTaGCTCCAAATCTTAAACAATTTCTATTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: KNPQIRVWNSFS*LQILNNFYFFS
Trigger: GGAGAAGAAATAGAAATTGTTTAAGATTTGGAGTCAGGAAAAGCTGTTCCAAACCCTAATCTGTGGGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS GCA 72 bp CATCTATTCTGTTCAATATTTGAAATACTCCGGGTCTaGATCTATACCACTCCTTTGTCCATTATTCATCTG +
Preference number: 6 (lower is better)
Translates to: HLFCSIFEILRV*IYTTPLSIIHL
Trigger: CAGATGAATAATGGACAAAGGAGTGGTATAGATGCAGACCCGGAGTATTTCAAATATTGAACAGAATAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp TTTGAAATACTCCGGGTCTGCATCTATACCACTCCTTaGTCCATTATTCATCTGTTTATTCCATTTGCTGAT +
Preference number: 6 (lower is better)
Translates to: FEILRVCIYTTP*SIIHLFIPFAD
Trigger: ATCAGCAAATGGAATAAACAGATGAATAATGGACAAAGGAGTGGTATAGATGCAGACCCGGAGTATTTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp AAACACTTACCCTTCAACATCTATTCTGTTCAATATTaGAAATACTCCGGGTCTGCATCTATACCACTCCTT +
Preference number: 6 (lower is better)
Translates to: KHLPFNIYSVQY*KYSGSASIPLL
Trigger: AAGGAGTGGTATAGATGCAGACCCGGAGTATTTCAAATATTGAACAGAATAGATGTTGAAGGGTAAGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp GGTTTGTTTTGGATTTGTAACACAATAATTTCACATTaGTGTACAACACTTTACCACTCCAGGACTCAGCCT +
Preference number: 6 (lower is better)
Translates to: GLFWICNTIISH*CTTLYHSRTQP
Trigger: AGGCTGAGTCCTGGAGTGGTAAAGTGTTGTACACAAATGTGAAATTATTGTGTTACAAATCCAAAACAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS GCA 72 bp ATCCTTGAAGTTAGAAATGCTACCAACTGCCCTTGTTaGAATGTGTTACATTTCATCCCAGGTATAATAAAA +
Preference number: 6 (lower is better)
Translates to: ILEVRNATNCPC*NVLHFIPGIIK
Trigger: TTTTATTATACCTGGGATGAAATGTAACACATTGCAACAAGGGCAGTTGGTAGCATTTCTAACTTCAAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636993.1
CDS CCA 72 bp GTGGTGAGAGTCAAGAGATACGGTACTGGTTTGTTTTaGATTTGTAACACAATAATTTCACATTTGTGTACA +
Preference number: 6 (lower is better)
Translates to: VVRVKRYGTGLF*ICNTIISHLCT
Trigger: TGTACACAAATGTGAAATTATTGTGTTACAAATCCAAAACAAACCAGTACCGTATCTCTTGACTCTCACCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CCA 72 bp CTGAAAAACATCCTGTTTAATATGTATTGTAAAGCATaGCGTATGCTGTCTTTGTTCATGCACATTTTGGAC +
Preference number: 6 (lower is better)
Translates to: LKNILFNMYCKA*RMLSLFMHILD
Trigger: GTCCAAAATGTGCATGAACAAAGACAGCATACGCCATGCTTTACAATACATATTAAACAGGATGTTTTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637249.1
CDS CAA 72 bp GTGAATTCCATTTATTTAGTTCAGACTGTACACAATTaGGTCAAAGTTAGAGTTCATAAATGTGACCCGTGC +
Preference number: 6 (lower is better)
Translates to: VNSIYLVQTVHN*VKVRVHKCDPC
Trigger: GCACGGGTCACATTTATGAACTCTAACTTTGACCAAATTGTGTACAGTCTGAACTAAATAAATGGAATTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636234.1
CDS CAA 72 bp TGCATTCAAGGTTTTGGTTTCATTTGCTGTTCACATTaGATTTGGGTACACAAGGAGATTTCTATTGTGGTA +
Preference number: 6 (lower is better)
Translates to: CIQGFGFICCSH*IWVHKEISIVV
Trigger: TACCACAATAGAAATCTCCTTGTGTACCCAAATCAAATGTGAACAGCAAATGAAACCAAAACCTTGAATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676103.1