Pregenerated sensors for MAGI1-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000272610Ensembl transcript IDs: ENST00000460754.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGCGGATCCTGCCAAGTCTCTGCTCGTACCTGAATGCAGGAAACTaGGCATGCTCCCCATCAGGGAGCAGCACTAGGGCAGGACACACG | + |
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Preference number: 5 (lower is better) Translates to: GRILPSLCSYLNAGN*ACSPSGSSTRAGHT Trigger: CGTGTGTCCTGCCCTAGTGCTGCTCCCTGATGGGGAGCATGCTCAGTTTCCTGCATTCAGGTACGAGCAGAGACTTGGCAGGATCCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS GCA 90 bp | CCCTCCCACTTATTCCAATTTGCGACAGGCATCCAGGGCTCTTCCTaGAACTCTGAACGGGGCGGATCCTGCCAAGTCTCTGCTCGTACC | + |
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Preference number: 5 (lower is better) Translates to: PSHLFQFATGIQGSS*NSERGGSCQVSART Trigger: GGTACGAGCAGAGACTTGGCAGGATCCGCCCCGTTCAGAGTTGCAGGAAGAGCCCTGGATGCCTGTCGCAAATTGGAATAAGTGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS TCA 90 bp | TGCAACTCTGAACGGGGCGGATCCTGCCAAGTCTCTGCTCGTACCTaGATGCAGGAAACTGAGCATGCTCCCCATCAGGGAGCAGCACTA | + |
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Preference number: 5 (lower is better) Translates to: CNSERGGSCQVSART*MQETEHAPHQGAAL Trigger: TAGTGCTGCTCCCTGATGGGGAGCATGCTCAGTTTCCTGCATTCAGGTACGAGCAGAGACTTGGCAGGATCCGCCCCGTTCAGAGTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS GCA 90 bp | TGCTGCTCTCTGGACCCACGGCAAGCTCTCAGGCCTGCAGAGGTTTaGAGCAAAATCTACAGCAAAGCTCGTCCACAGCTGAGCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: CCSLDPRQALRPAEV*SKIYSKARPQLSCL Trigger: CAAGCAGCTCAGCTGTGGACGAGCTTTGCTGTAGATTTTGCTGCAAACCTCTGCAGGCCTGAGAGCTTGCCGTGGGTCCAGAGAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS GCA 90 bp | GGAGTAGATCAGGACACATCCAGTGACGTCACAGCCAAGTACATCTaGTGCTCTCTGGACCCACGGCAAGCTCTCAGGCCTGCAGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: GVDQDTSSDVTAKYI*CSLDPRQALRPAEV Trigger: AACCTCTGCAGGCCTGAGAGCTTGCCGTGGGTCCAGAGAGCAGCAGATGTACTTGGCTGTGACGTCACTGGATGTGTCCTGATCTACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 90 bp | TCAGGGAGCAGCACTAGGGCAGGACACACGCCATTACCTCCAGCTTaGGAATCAGACCAGATCAGCAGCATCACCCTGGGTAGAGCCATA | + |
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Preference number: 5 (lower is better) Translates to: SGSSTRAGHTPLPPA*ESDQISSITLGRAI Trigger: TATGGCTCTACCCAGGGTGATGCTGCTGATCTGGTCTGATTCCCAAGCTGGAGGTAATGGCGTGTGTCCTGCCCTAGTGCTGCTCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 90 bp | AGGACACATCCAGTGACGTCACAGCCAAGTACATCTGCTGCTCTCTaGACCCACGGCAAGCTCTCAGGCCTGCAGAGGTTTGCAGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: RTHPVTSQPSTSAAL*THGKLSGLQRFAAK Trigger: TTTTGCTGCAAACCTCTGCAGGCCTGAGAGCTTGCCGTGGGTCCAGAGAGCAGCAGATGTACTTGGCTGTGACGTCACTGGATGTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS TCA 90 bp | CTTATTCCAATTTGCGACAGGCATCCAGGGCTCTTCCTGCAACTCTaGACGGGGCGGATCCTGCCAAGTCTCTGCTCGTACCTGAATGCA | + |
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Preference number: 5 (lower is better) Translates to: LIPICDRHPGLFLQL*TGRILPSLCSYLNA Trigger: TGCATTCAGGTACGAGCAGAGACTTGGCAGGATCCGCCCCGTTCAGAGTTGCAGGAAGAGCCCTGGATGCCTGTCGCAAATTGGAATAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS GCA 90 bp | CAAGTACATCTGCTGCTCTCTGGACCCACGGCAAGCTCTCAGGCCTaGAGAGGTTTGCAGCAAAATCTACAGCAAAGCTCGTCCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: QVHLLLSGPTASSQA*RGLQQNLQQSSSTA Trigger: AGCTGTGGACGAGCTTTGCTGTAGATTTTGCTGCAAACCTCTGCAGGCCTGAGAGCTTGCCGTGGGTCCAGAGAGCAGCAGATGTACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 90 bp | CATTTCACTGCAGAAGTTTCCAAGGTTCTGGGGCAGCGGCCAAGATaGCGAGCTTTGGTGCTGTCCGTGGGTAAAGTGCTGATTTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: HFTAEVSKVLGQRPR*RALVLSVGKVLICL Trigger: GAGACAAATCAGCACTTTACCCACGGACAGCACCAAAGCTCGCCATCTTGGCCGCTGCCCCAGAACCTTGGAAACTTCTGCAGTGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CAA 90 bp | CCTTGTCTCTGTACCAGCCTGTGGCTCCCTCCCACTTATTCCAATTaGCGACAGGCATCCAGGGCTCTTCCTGCAACTCTGAACGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PCLCTSLWLPPTYSN*RQASRALPATLNGA Trigger: CGCCCCGTTCAGAGTTGCAGGAAGAGCCCTGGATGCCTGTCGCAAATTGGAATAAGTGGGAGGGAGCCACAGGCTGGTACAGAGACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS GCA 72 bp | GACACATCCAGTGACGTCACAGCCAAGTACATCTGCTaGTCTCTGGACCCACGGCAAGCTCTCAGGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: DTSSDVTAKYIC*SLDPRQALRPA Trigger: TGCAGGCCTGAGAGCTTGCCGTGGGTCCAGAGAGCAGCAGATGTACTTGGCTGTGACGTCACTGGATGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS GCA 72 bp | CAGGACACATCCAGTGACGTCACAGCCAAGTACATCTaGTGCTCTCTGGACCCACGGCAAGCTCTCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: QDTSSDVTAKYI*CSLDPRQALRP Trigger: AGGCCTGAGAGCTTGCCGTGGGTCCAGAGAGCAGCAGATGTACTTGGCTGTGACGTCACTGGATGTGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 72 bp | CCAGTGACGTCACAGCCAAGTACATCTGCTGCTCTCTaGACCCACGGCAAGCTCTCAGGCCTGCAGAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: PVTSQPSTSAAL*THGKLSGLQRF Trigger: AAACCTCTGCAGGCCTGAGAGCTTGCCGTGGGTCCAGAGAGCAGCAGATGTACTTGGCTGTGACGTCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 72 bp | GCAGAAGTTTCCAAGGTTCTGGGGCAGCGGCCAAGATaGCGAGCTTTGGTGCTGTCCGTGGGTAAAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: AEVSKVLGQRPR*RALVLSVGKVL Trigger: CAGCACTTTACCCACGGACAGCACCAAAGCTCGCCATCTTGGCCGCTGCCCCAGAACCTTGGAAACTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CAA 90 bp | CTGCTGCTCTCTGGACCCACGGCAAGCTCTCAGGCCTGCAGAGGTTaGCAGCAAAATCTACAGCAAAGCTCGTCCACAGCTGAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLLSGPTASSQACRG*QQNLQQSSSTAELL Trigger: AAGCAGCTCAGCTGTGGACGAGCTTTGCTGTAGATTTTGCTGCAAACCTCTGCAGGCCTGAGAGCTTGCCGTGGGTCCAGAGAGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS GCA 72 bp | CTGGACCCACGGCAAGCTCTCAGGCCTGCAGAGGTTTaGAGCAAAATCTACAGCAAAGCTCGTCCACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LDPRQALRPAEV*SKIYSKARPQL Trigger: CAGCTGTGGACGAGCTTTGCTGTAGATTTTGCTGCAAACCTCTGCAGGCCTGAGAGCTTGCCGTGGGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 72 bp | AGCACTAGGGCAGGACACACGCCATTACCTCCAGCTTaGGAATCAGACCAGATCAGCAGCATCACCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: STRAGHTPLPPA*ESDQISSITLG Trigger: ACCCAGGGTGATGCTGCTGATCTGGTCTGATTCCCAAGCTGGAGGTAATGGCGTGTGTCCTGCCCTAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CAA 72 bp | TCCAAGGTTCTGGGGCAGCGGCCAAGATGGCGAGCTTaGGTGCTGTCCGTGGGTAAAGTGCTGATTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SKVLGQRPRWRA*VLSVGKVLICL Trigger: GAGACAAATCAGCACTTTACCCACGGACAGCACCAAAGCTCGCCATCTTGGCCGCTGCCCCAGAACCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CAA 90 bp | GCAGAAGTTTCCAAGGTTCTGGGGCAGCGGCCAAGATGGCGAGCTTaGGTGCTGTCCGTGGGTAAAGTGCTGATTTGTCTCTTGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AEVSKVLGQRPRWRA*VLSVGKVLICLLAE Trigger: CTCAGCCAAGAGACAAATCAGCACTTTACCCACGGACAGCACCAAAGCTCGCCATCTTGGCCGCTGCCCCAGAACCTTGGAAACTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CAA 72 bp | TCTGGACCCACGGCAAGCTCTCAGGCCTGCAGAGGTTaGCAGCAAAATCTACAGCAAAGCTCGTCCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SGPTASSQACRG*QQNLQQSSSTA Trigger: AGCTGTGGACGAGCTTTGCTGTAGATTTTGCTGCAAACCTCTGCAGGCCTGAGAGCTTGCCGTGGGTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS GCA 72 bp | TTATTCCAATTTGCGACAGGCATCCAGGGCTCTTCCTaGAACTCTGAACGGGGCGGATCCTGCCAAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LFQFATGIQGSS*NSERGGSCQVS Trigger: AGAGACTTGGCAGGATCCGCCCCGTTCAGAGTTGCAGGAAGAGCCCTGGATGCCTGTCGCAAATTGGAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS TCA 72 bp | ACCGGAACAGTGCTGACCTCTTTAAGAGGAGAGCACTaGGTGGGAAATAGCACAAGGAGTCTCCCAGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: TGTVLTSLRGEH*VGNSTRSLPGY Trigger: GTACCCTGGGAGACTCCTTGTGCTATTTCCCACTCAGTGCTCTCCTCTTAAAGAGGTCAGCACTGTTCCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 72 bp | CCAAACTACTCAGAAGGCTGGGGTGGGAAGATCATTTaGACCCAGGAGGTGGTGGTTGTAGTGAGCCGAAAT | + |
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Preference number: 6 (lower is better) Translates to: PNYSEGWGGKII*TQEVVVVVSRN Trigger: ATTTCGGCTCACTACAACCACCACCTCCTGGGTCCAAATGATCTTCCCACCCCAGCCTTCTGAGTAGTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS TCA 72 bp | CCCAGTACTTTGGGAACCCAAGGCAGACAGATAGCTTaGGCCCAAGCATTCGATATTAGCCTGGGCAACACA | + |
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Preference number: 6 (lower is better) Translates to: PSTLGTQGRQIA*AQAFDISLGNT Trigger: TGTGTTGCCCAGGCTAATATCGAATGCTTGGGCTCAAGCTATCTGTCTGCCTTGGGTTCCCAAAGTACTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 72 bp | GACAACACAGCAATACCTTGTCTCTGTACCAGCCTGTaGCTCCCTCCCACTTATTCCAATTTGCGACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: DNTAIPCLCTSL*LPPTYSNLRQA Trigger: TGCCTGTCGCAAATTGGAATAAGTGGGAGGGAGCCACAGGCTGGTACAGAGACAAGGTATTGCTGTGTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CAA 90 bp | TGGCGAGCTTTGGTGCTGTCCGTGGGTAAAGTGCTGATTTGTCTCTaGGCTGAGACCTCAGATAACCTCATGTATGAGAAGGAGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: WRALVLSVGKVLICL*AETSDNLMYEKEKE Trigger: CTCCTTCTCCTTCTCATACATGAGGTTATCTGAGGTCTCAGCCAAGAGACAAATCAGCACTTTACCCACGGACAGCACCAAAGCTCGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CAA 72 bp | TTGGTGCTGTCCGTGGGTAAAGTGCTGATTTGTCTCTaGGCTGAGACCTCAGATAACCTCATGTATGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVLSVGKVLICL*AETSDNLMYEK Trigger: CTTCTCATACATGAGGTTATCTGAGGTCTCAGCCAAGAGACAAATCAGCACTTTACCCACGGACAGCACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 72 bp | CACTTTGTGGGAGAGAAGGACAGCATGTGTAGAGACTaGACAGTAACAGTGTGTCAAGACCTCTGCATATTT | + |
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Preference number: 6 (lower is better) Translates to: HFVGEKDSMCRD*TVTVCQDLCIF Trigger: AAATATGCAGAGGTCTTGACACACTGTTACTGTCCAGTCTCTACACATGCTGTCCTTCTCTCCCACAAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS TCA 72 bp | AAAAGTTTTGTGCTGCAAATGATACCATCAAGAAAGTaGAGATGCAGGCTAGGTGTAGCAGCTCACGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: KSFVLQMIPSRK*RCRLGVAAHAC Trigger: ACAGGCGTGAGCTGCTACACCTAGCCTGCATCTTCACTTTCTTGATGGTATCATTTGCAGCACAAAACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS TCA 72 bp | AATGAAAAACACAATGAGATCGACTTCATACACCTTTaGTTGGTGTACAAAGACAGGCAAGTGCTGGTGACG | + |
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Preference number: 6 (lower is better) Translates to: NEKHNEIDFIHL*LVYKDRQVLVT Trigger: CGTCACCAGCACTTGCCTGTCTTTGTACACCAATCAAAGGTGTATGAAGTCGATCTCATTGTGTTTTTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS TCA 72 bp | GGTGCTGGGAAAACTTCACATCCACATGCAAAAGAATaGAGTTGGGACCCTTTCCTATGCAATACACAAAAA | + |
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Preference number: 6 (lower is better) Translates to: GAGKTSHPHAKE*SWDPFLCNTQK Trigger: TTTTTGTGTATTGCATAGGAAAGGGTCCCAACTTCATTCTTTTGCATGTGGATGTGAAGTTTTCCCAGCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CCA 72 bp | AGGCACGTTATTGCATTATTACATTATTACACTTTGTaGGAGAGAAGGACAGCATGTGTAGAGACTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: RHVIALLHYYTL*ERRTACVETGQ Trigger: CTGTCCAGTCTCTACACATGCTGTCCTTCTCTCCCACAAAGTGTAATAATGTAATAATGCAATAACGTGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS GCA 72 bp | TGTAGAGACTGGACAGTAACAGTGTGTCAAGACCTCTaGATATTTGATTTCAACACAGGTGCCAAGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: CRDWTVTVCQDL*IFDFNTGAKKI Trigger: AATTTTCTTGGCACCTGTGTTGAAATCAAATATGCAGAGGTCTTGACACACTGTTACTGTCCAGTCTCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CAA 72 bp | AGTCTGGCAGTTACTAAAAACTTAAAGAGTTTCCATTaGAACCAGCAATTCCATTCCCAGGTATGTACCCAA | + |
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Preference number: 6 (lower is better) Translates to: SLAVTKNLKSFH*NQQFHSQVCTQ Trigger: TTGGGTACATACCTGGGAATGGAATTGCTGGTTCAAATGGAAACTCTTTAAGTTTTTAGTAACTGCCAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS CAA 90 bp | ATCACAAAGGTTTCAGACAAAGGGGGACTGCTGAAATCCACTCATTaGGTTATCAGGCACGTTATTGCATTATTACATTATTACACTTTG | + |
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Preference number: 6 (lower is better) Translates to: ITKVSDKGGLLKSTH*VIRHVIALLHYYTL Trigger: CAAAGTGTAATAATGTAATAATGCAATAACGTGCCTGATAACCAAATGAGTGGATTTCAGCAGTCCCCCTTTGTCTGAAACCTTTGTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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| CDS TCA 72 bp | CCCAGGGTACTTATGATGTTCCATATATTAATCTGGTaGTGGTTACACAGTAATACCTCAATTAAAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PRVLMMFHILIW*WLHSNTSIKRS Trigger: TGACCTTTTAATTGAGGTATTACTGTGTAACCATCACCAGATTAATATATGGAACATCATAAGTACCCTGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460754.1 |
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