RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAGEE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198934

Ensembl transcript IDs: ENST00000361470.4

Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGTCAAAGGCCCCTCCTTaGAAGGCCCCTCTGACTGCC +
Preference number: 2 (lower is better)
Translates to: RDSKWSITFTQSDNILKQSKAPP*KAPLTA
Trigger: GGCAGTCAGAGGGGCCTTGCAAGGAGGGGCCTTTGA...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
3UTR-3UTR TCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGCCAATACATGAGAACTaGGGCTCAAAGGCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: RDSKWSITFTQSDNILKQPIHEN*GSKAPP
Trigger: AGGAGGGGCCTTTGAGCCTCAGTTCTCATGTATTGG...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACGTGCGCAGTAGCCTTTaGAACGCGGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYVRSSL*NAAAAA
Trigger: CGCCGCCGCCGCCGCGTTGCAAAGGCTACTGCGCAC...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCGACAGGCCCGCGATCTaGCAGAGAGGACGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPDRPAI*QRGREV
Trigger: CACCTCCCGTCCTCTCTGCCAGATCGCGGGCCTGTC...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAACAGGTCCCTCAGAGATaGTGGGCTGCCCGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQQVPQR*WAARRR
Trigger: GCGCCTCCGGGCAGCCCACCATCTCTGAGGGACCTG...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGACCCTGGGGGACGTCTaGGCCTGGCACATCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQTLGDV*AWHISG
Trigger: CCCGCTGATGTGCCAGGCTCAGACGTCCCCCAGGGT...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCTGCCCGGAGGCGCTTaGGGCCTCAGAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYLPGGA*GLRDGG
Trigger: CCCACCATCTCTGAGGCCTCAAGCGCCTCCGGGCAG...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACTGGGAGGCCCGGAGGTaGTTAGGCCCTCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYWEARR*LGPHWG
Trigger: CCCCCAGTGAGGGCCTAAGCACCTCCGGGCCTCCCA...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATTGGGCGGCAGGGAGGTaGTCGGTACCTCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNWAAGR*SVPQRR
Trigger: CCGCCTCTGAGGTACCGAGCACCTCCCTGCCGCCCA...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAATGGGCGGCACAGAGGTaGTCAGTCCCTCACCGGGGA +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQWAAQR*SVPHRG
Trigger: TCCCCGGTGAGGGACTGAGCACCTCTGTGCCGCCCA...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAACCTGCCCACCGGCGTTaGCGTGTAGGAGCAGACACC +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQPAHRR*RVGADT
Trigger: GGTGTCTGCTCCTACACGCCAACGCCGGTGGGCAGG...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAGTCCCTCAGAGATGGTaGGCTGCCCGGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQVPQRW*AARRRL
Trigger: CAAGCGCCTCCGGGCAGCCCACCATCTCTGAGGGAC...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCGTCCGTCAGGGGCGGTaGGCTGCACTAAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPVRQGR*AALRCL
Trigger: CAAGCACCTTAGTGCAGCCCACCGCCCCTGACGGAC...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCCGGGAGGTGTGTAGGTaGCTCGGCACAAAACTGCCG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPREVCR*LGTKLP
Trigger: CGGCAGTTTTGTGCCGAGGCACCTACACACCTCCCG...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGTGGGCGGCACAAAGGTaGTTGGGCCCTCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQWAAQR*LGPQRR
Trigger: CCTCCGCTGAGGGCCCAAGCACCTTTGTGCCGCCCA...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACTCAGAGATGGTGGGCTaGCCGGAGGCGCTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYSEMVG*PEALEA
Trigger: GGCCTCAAGCGCCTCCGGGCAGCCCACCATCTCTGA...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACTGGGCGGCACGGAGGTaGTCAACTCCTCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYWAARR*STPQWR
Trigger: CCGCCACTGAGGAGTTGAGCACCTCCGTGCCGCCCA...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCCTCCAGGTGGGCTGCTaGTCGCCTGAGTATCTCAGG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPLQVGC*SPEYLR
Trigger: CCTGAGATACTCAGGCGAGCAGCAGCCCACCTGGAG...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACGAATCGCTGGGACCCTaGGGGACGTCTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYESLGP*GTSEPG
Trigger: GCCAGGCTCAGACGTCCCCCAGGGTCCCAGCGATTC...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAGGATCTGGGAATCGCTaGGACCCTGGGGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQGSGNR*DPGGRL
Trigger: CAGACGTCCCCCAGGGTCCCAGCGATTCCCAGATCC...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAAGGCCCTGGAGGATCTaGGAATCGCTGGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQRPWRI*ESLGPW
Trigger: CCAGGGTCCCAGCGATTCCCAGATCCTCCAGGGCCT...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCTGCTTTCTCCCAGCTTaGACCCCTAAGCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPCFLPA*TPKPRR
Trigger: TCTGCGGGGCTTAGGGGTTCAAGCTGGGAGAAAGCA...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGCCAGAGACATGGTCCTaGCCACCGGCGTTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQPETWS*PPALAC
Trigger: ACACGCCAACGCCGGTGGGCAGGACCATGTCTCTGG...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCCCCCAGCTGCTGTTGTaGGCAGTAGCCTTTGCAACG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPPQLLL*AVAFAT
Trigger: CGTTGCAAAGGCTACTGCGCACAACAGCAGCTGGGG...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACTGGGCAGCACGGAGGTaGCAGGTCCCTCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYWAARR*QVPQRW
Trigger: CCATCTCTGAGGGACCTGGCACCTCCGTGCTGCCCA...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGGAGGCGCAGAGGCCCTaGAGGATCTGGGAATCGCTG +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQEAQRP*RIWESL
Trigger: CAGCGATTCCCAGATCCTCCAGGGCCTCTGCGCCTC...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAGGGCTGCTGCTCGCCTaGGTATCTCAGGAAACTGGT +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQGLLLA*VSQETG
Trigger: ACCAGTTTCCTGAGATACTCAGGCGAGCAGCAGCCC...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATAAGGGCCTCCTAAAGTaGGGGAGAGCCTGCCAACCC +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNKGLLK*GRACQP
Trigger: GGGTTGGCAGGCTCTCCCTCACTTTAGGAGGCCCTT...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACTGGGCTGCACTAAGGTaGTTGCGCCCTCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYWAALR*LRPHQE
Trigger: CTCCTGGTGAGGGCGCAAGCACCTTAGTGCAGCCCA...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGGCACTCCAGGTGGGCTaGTGCTCGCCTGAGTATCTC +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQALQVG*CSPEYL
Trigger: GAGATACTCAGGCGAGCAGCAGCCCACCTGGAGTGC...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCGGCCTCATCTTCCATTaGCTCCCTGTACTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPGLIFH*LPVLLW
Trigger: CCACAGCAGTACAGGGAGGCAATGGAAGATGAGGCC...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCCAAGGCCCCTCTGACTaGCATGCATTCCTCTACCTG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPQGPSD*HAFLYL
Trigger: CAGGTAGAGGAATGCATGGCAGTCAGAGGGGCCTTG...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATTCAAAGGCCCCTCCTTaGAAGGCCCCTCTGACTGCC +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNSKAPP*KAPLTA
Trigger: GGCAGTCAGAGGGGCCTTGCAAGGAGGGGCCTTTGA...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATGGCTTACCAGAGACATaGTCCTGCCCACCGGCGTTG +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNGLPET*SCPPAL
Trigger: CAACGCCGGTGGGCAGGACCATGTCTCTGGTAAGCC...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATGTTCCTCAGAGGAAGTaGGCGGCCTGGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNVPQRK*AAWRCS
Trigger: GGAACACCTCCAGGCCGCCCACTTCCTCTGAGGAAC...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACCACGGAGGTGCTTaGTCCCTCATAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNHHGGA*SLIGCG
Trigger: CCCACAGCCTATGAGGGACCAAGCACCTCCGTGGTG...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCAGTACGGAAGTGCTTaGTCCCTCACCGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNQYGSA*SLTGSG
Trigger: CCCACTCCCGGTGAGGGACCAAGCACTTCCGTACTG...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGAGGACCCTCAGAATCTaGGTCCACGGAGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQRTLRI*VHGGLG
Trigger: ACCAAGGCCTCCGTGGACTCAGATTCTGAGGGTCCT...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAACTTGCAAGGCCCCTCTaGCTGCCATGCATTCCTCTA +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQLARPL*LPCIPL
Trigger: TAGAGGAATGCATGGCAGTCAGAGGGGCCTTGCAAG...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGTGGGCACCAAGGAGATaGTTTGTCCGTCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQWAPRR*FVRQRR
Trigger: CCGCCTCTGACGGACAAAGCATCTCCTTGGTGCCCA...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAATTGCCTCCCTGTACTaGTGTGGCCAGTCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQIASLY*CGQSCG
Trigger: ACCACAGGACTGGCCACAGCAGTACAGGGAGGCAAT...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATAGGCCTCAGAGATGGTaGGCGGCACAAAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNRPQRW*AAQRCL
Trigger: CAAGCACCTTTGTGCCGCCCACCATCTCTGAGGCCT...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGTTGAGGCCTCAGAGATaGTGGGCGGCACAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQLRPQR*WAAQRC
Trigger: GCACCTTTGTGCCGCCCACCATCTCTGAGGCCTCAA...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATTCCCTCACCGGGGATTaGCAGTACGGAAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNSLTGD*QYGSAW
Trigger: CCAAGCACTTCCGTACTGCCAATCCCCGGTGAGGGA...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCATAGGGTACTTGCTCTaGTCCTTCACCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPIGYLL*SFTSRN
Trigger: GTTCCTGCTGGTGAAGGATCAGAGCAAGTACCCTAT...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAGGTCAGGGAACACTTTaGTGCACTCTCGGCCAATGT +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQGQGTL*CTLGQC
Trigger: ACATTGGCCGAGAGTGCAGCAAAGTGTTCCCTGACC...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGCAGAAAGGCCCAGACTaGAGACTCCCTGGCATGGTT +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQQKGPD*RLPGMV
Trigger: AACCATGCCAGGGAGTCTGCAGTCTGGGCCTTTCTG...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACAAAATGCACTCCAGGTaGGCTGCTGCTCGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYKMHSR*AAARLS
Trigger: ACTCAGGCGAGCAGCAGCCCACCTGGAGTGCATTTT...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCAGGAGGCCCATCTTTaGCCCATTTGGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNQEAHL*PIWALF
Trigger: GAAGAGAGCCCAAATGGGCCAAAGATGGGCCTCCTG...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCTCCCTGTACTGCTGTaGCCAGTCCTGTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNLPVLL*PVLWFL
Trigger: AAGGAACCACAGGACTGGCCACAGCAGTACAGGGAG...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAATAGCTGGAAACCTCTaGATCAGGGGATGGTACCTC +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQIAGNL*IRGWYL
Trigger: GAGGTACCATCCCCTGATTCAGAGGTTTCCAGCTAT...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAATACATGAGAACTaGGGCTCAAAGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYPIHEN*GSKAPP
Trigger: AGGAGGGGCCTTTGAGCCTCAGTTCTCATGTATTGG...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAATTCTATAGGGCCTTCTaGACCCTTAGGACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQFYRAF*TLRTLR
Trigger: TCTGAGGGTCCTAAGGGTGCAGAAGGCCCTATAGAA...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAGGGCTTCAGGGTAATTaGAACCCGGGAAGTATTGAG +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQGLQGN*NPGSIE
Trigger: CTCAATACTTCCCGGGTTGCAATTACCCTGAAGCCC...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAACAGGGAACACTTTGCTaGACTCTCGGCCAATGTAGT +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQQGTLC*TLGQCS
Trigger: ACTACATTGGCCGAGAGTGCAGCAAAGTGTTCCCTG...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACAAACAAGGGAACACTTaGAGGGGTTCCGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYKQGNT*RGSGPQ
Trigger: CTGTGGACCGGAACCCCTCCAAGTGTTCCCTTGTTT...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCTTGGGTTCCCAAAAATaGAAAGCCTCCTTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPLGSQK*KASFPA
Trigger: AGCGGGAAAGGAGGCTTTCCATTTTTGGGAACCCAA...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGCCTCAGCAAAGGCTCTaGCAGCATCTTCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQPQQRL*QHLLPE
Trigger: CTCTGGAAGAAGATGCTGCCAGAGCCTTTGCTGAGG...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACGTTGCCAGGCCTGTTTaGACTGTCTACGATCTCCTC +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYVARPV*TVYDLL
Trigger: GAGGAGATCGTAGACAGTCCAAACAGGCCTGGCAAC...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGCCAGCTTCCTTGCCTTaGTCTCCAATCTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQPASLP*SPILTQ
Trigger: CTGAGTCAAGATTGGAGAGCAAGGCAAGGAAGCTGG...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGGAAAAAGGCAGGCACTaGCCAGCAGTGAATGCTAGT +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQEKGRH*PAVNAS
Trigger: ACTAGCATTCACTGCTGGCCAGTGCCTGCCTTTTTC...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCTCAGCCTCCTTGGCTTaGTTGCCATTCAGGAATATT +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPSASLA*LPFRNI
Trigger: AATATTCCTGAATGGCAACCAAGCCAAGGAGGCTGA...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGTTGGTGGTTTCTAGGTaGGATCTTGGGCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQLVVSR*DLGPQK
Trigger: TTTCTGGGGCCCAAGATCCCACCTAGAAACCACCAA...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAGCAGACTCCCTGGCATaGTTGCCCATAATAAAGATG +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQADSLA*LPIIKM
Trigger: CATCTTTATTATGGGCAACCATGCCAGGGAGTCTGC...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGCTGTGGCCAGTCCTGTaGTTCCTTTCTGTGGATTCT +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQLWPVL*FLSVDS
Trigger: AGAATCCACAGAAAGGAACCACAGGACTGGCCACAG...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGCAGAATGTAGGTGTGTaGCTCAGGGTCAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQQNVGV*LRVKFS
Trigger: AGAGAACTTGACCCTGAGGCACACACCTACATTCTG...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCCTCCTTGGCTTGGTTaGCATTCAGGAATATTTGGC +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNPPWLG*HSGIFG
Trigger: GCCAAATATTCCTGAATGGCAACCAAGCCAAGGAGG...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCACAAAGATTTGCCTGTaGCCAACATCAGCTCTATTG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPTKICL*PTSALL
Trigger: CAATAGAGCTGATGTTGGGCACAGGCAAATCTTTGT...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATGGTTACCCTAGGGCTTaGCAAAACAAGGGAACACTT +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNGYPRA*QNKGTL
Trigger: AAGTGTTCCCTTGTTTTGCCAAGCCCTAGGGTAACC...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGTGTTCCATAGGGTCTTaGGGCTTCAGGGTAATTGCA +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQCSIGS*GFRVIA
Trigger: TGCAATTACCCTGAAGCCCCAAGACCCTATGGAACA...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACAAATCTCAGCCTCCTTaGCTTGGTTGCCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYKSQPP*LGCHSG
Trigger: TCCTGAATGGCAACCAAGCCAAGGAGGCTGAGATTT...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCATTTTGAGGAATAGCTaGAAACCTCTGAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPILRNS*KPLNQG
Trigger: CCCCTGATTCAGAGGTTTCCAGCTATTCCTCAAAAT...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGCCTTTCTGTGGATTCTaGCCACATATCGCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQPFCGF*PHIARL
Trigger: AAGCCTTGCGATATGTGGCCAGAATCCACAGAAAGG...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGTGTGGTTCCTTTCTGTaGATTCTGGCCACATATCGC +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQCGSFL*ILATYR
Trigger: GCGATATGTGGCCAGAATCCACAGAAAGGAACCACA...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCTCTACCTGAAGTTGTaGACAAAGATTTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNLYLKL*TKICLC
Trigger: GCACAGGCAAATCTTTGTTCACAACTTCAGGTAGAG...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGGCATCAAAAAGTTGTTaGCAGGCCTGTTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQASKSC*QACLDC
Trigger: ACAGTCCAAACAGGCCTGGCAACAACTTTTTGATGC...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCCATACAAACTCATATTaGACTGGATCACTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPHTNSY*TGSLSG
Trigger: TCCTGACAGTGATCCAGTGCAATATGAGTTTGTATG...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCCCATTCAGGAATATTTaGCCTAGAATCATCATCAGG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPPFRNI*PRIIIR
Trigger: CCTGATGATGATTCTAGGCCAAATATTCCTGAATGG...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAGACAGAAGTCTCTTTaGGTTCCCAAAAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPRQKSL*VPKNGK
Trigger: CTTTCCATTTTTGGGAACCCAAAGAGACTTCTGTCT...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATAAACTCATATTGCACTaGATCACTGTCAGGAACCCG +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNKLILH*ITVRNP
Trigger: CGGGTTCCTGACAGTGATCCAGTGCAATATGAGTTT...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCAACATCAGCTCTATTaGCCTCATCTTCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYQHQLY*PHLPLP
Trigger: AGGCAATGGAAGATGAGGCCAATAGAGCTGATGTTG...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR GCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAATGAAGCTTAGGACCTaGATCAAAAAGTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQMKLRT*IKKLLP
Trigger: TGGCAACAACTTTTTGATGCAGGTCCTAAGCTTCAT...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCTTCGTTGTATTTCTCTaGCCAATCCATAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: QNSYQNTTETASGQSHLPFVVFL*PIHRIF
Trigger: AAAGATCCTATGGATTGGCCAGAGAAATACAACGAA...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR TCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAATGCATTCCTCTACCTaGAGTTGTGAACAAAGATTT +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQMHSST*SCEQRF
Trigger: AAATCTTTGTTCACAACTTCAGGTAGAGGAATGCAT...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATAAACTCATACTCCACTaGTTTACAGTCAGTTACTGG +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNKLILH*FTVSYW
Trigger: CCAGTAACTGACTGTAAACCAGTGGAGTATGAGTTT...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGGAATTTTCATCTTGGTaGTTTCTAGGTGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RDSKWSITFTQSDNILKQEFSSW*FLGGIL
Trigger: CAAGATCCCACCTAGAAACCACCAAGATGAAAATTC...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATTATAGGAGTGATTCCTaGGATCAAGTACCACTAGTT +
Preference number: 4 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNYRSDS*DQVPLV
Trigger: AACTAGTGGTACTTGATCCCAGGAATCACTCCTATA...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CCA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAAGTATCTCAGGAAACTaGTTGCGATATTCTTTAACA +
Preference number: 4 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQSISGN*LRYSLT
Trigger: TGTTAAAGAATATCGCAACCAGTTTCCTGAGATACT...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 90 bp ACGGAGGTGCTTGGGCCCTCAGAGGCGCAGAGGCCCTGGAGGATCTaGGAATCGCTGGGACCCTGGGGGACGTCTGAGCCTGGCACATCA +
Preference number: 5 (lower is better)
Translates to: TEVLGPSEAQRPWRI*ESLGPWGTSEPGTS
Trigger: TGATGTGCCAGGCTCAGACGTCCCCCAGGGTCCCAGCGATTCCCAGATCCTCCAGGGCCTCTGCGCCTCTGAGGGCCCAAGCACCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 90 bp AGGGGCCTGCATTTCGCCCCAGCTGCTGTTGTGCGCAGTAGCCTTTaGAACGCGGCGGCGGCGGCGGCGCGAATTCTGGCTTACCAGAGA +
Preference number: 5 (lower is better)
Translates to: RGLHFAPAAVVRSSL*NAAAAAARILAYQR
Trigger: TCTCTGGTAAGCCAGAATTCGCGCCGCCGCCGCCGCCGCGTTGCAAAGGCTACTGCGCACAACAGCAGCTGGGGCGAAATGCAGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS TCA 90 bp CTCGAATTCTATAGGGCCTTCTGCACCCTTAGGACCCTCAGAATCTaGGTCCACGGAGGCCTTGGTTACCCTAGGGCTTGGCAAAACAAG +
Preference number: 5 (lower is better)
Translates to: LEFYRAFCTLRTLRI*VHGGLGYPRAWQNK
Trigger: CTTGTTTTGCCAAGCCCTAGGGTAACCAAGGCCTCCGTGGACTCAGATTCTGAGGGTCCTAAGGGTGCAGAAGGCCCTATAGAATTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS TCA 90 bp GCCCCTCCTTGCAAGGCCCCTCTGACTGCCATGCATTCCTCTACCTaGAGTTGTGAACAAAGATTTGCCTGTGCCCAACATCAGCTCTAT +
Preference number: 5 (lower is better)
Translates to: APPCKAPLTAMHSST*SCEQRFACAQHQLY
Trigger: ATAGAGCTGATGTTGGGCACAGGCAAATCTTTGTTCACAACTTCAGGTAGAGGAATGCATGGCAGTCAGAGGGGCCTTGCAAGGAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 90 bp AGAAGTCTCTTTGGGTTCCCAAAAATGGAAAGCCTCCTTTCCCGCTaGACCCCCATCCTCCAGAGCATTTCCCAAATCTCAGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RSLFGFPKMESLLSR*TPILQSISQISASL
Trigger: CAAGGAGGCTGAGATTTGGGAAATGCTCTGGAGGATGGGGGTGCAGCGGGAAAGGAGGCTTTCCATTTTTGGGAACCCAAAGAGACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 90 bp GCCATACAAACTCCACAGACAGAAGTCTCTTTGGGTTCCCAAAAATaGAAAGCCTCCTTTCCCGCTGCACCCCCATCCTCCAGAGCATTT +
Preference number: 5 (lower is better)
Translates to: AIQTPQTEVSLGSQK*KASFPAAPPSSRAF
Trigger: AAATGCTCTGGAGGATGGGGGTGCAGCGGGAAAGGAGGCTTTCCATTTTTGGGAACCCAAAGAGACTTCTGTCTGTGGAGTTTGTATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS TCA 90 bp TTGCAAGGCCCCTCTGACTGCCATGCATTCCTCTACCTGAAGTTGTaGACAAAGATTTGCCTGTGCCCAACATCAGCTCTATTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LQGPSDCHAFLYLKL*TKICLCPTSALLAS
Trigger: TGAGGCCAATAGAGCTGATGTTGGGCACAGGCAAATCTTTGTTCACAACTTCAGGTAGAGGAATGCATGGCAGTCAGAGGGGCCTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS TCA 90 bp TACATGAGAACTGAGGCTCAAAGGCCCCTCCTTGCAAGGCCCCTCTaGCTGCCATGCATTCCTCTACCTGAAGTTGTGAACAAAGATTTG +
Preference number: 5 (lower is better)
Translates to: YMRTEAQRPLLARPL*LPCIPLPEVVNKDL
Trigger: CAAATCTTTGTTCACAACTTCAGGTAGAGGAATGCATGGCAGTCAGAGGGGCCTTGCAAGGAGGGGCCTTTGAGCCTCAGTTCTCATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 90 bp CTCAGCTACGTTCTGTTCCATAGGGTCTTGGGGCTTCAGGGTAATTaGAACCCGGGAAGTATTGAGGCCCATAATACTAATGGAGTTGGG +
Preference number: 5 (lower is better)
Translates to: LSYVLFHRVLGLQGN*NPGSIEAHNTNGVG
Trigger: CCCAACTCCATTAGTATTATGGGCCTCAATACTTCCCGGGTTGCAATTACCCTGAAGCCCCAAGACCCTATGGAACAGAACGTAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 90 bp CCATCCTCCAGAGCATTTCCCAAATCTCAGCCTCCTTGGCTTGGTTaGCATTCAGGAATATTTGGCCTAGAATCATCATCAGGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: PSSRAFPKSQPPWLG*HSGIFGLESSSGGP
Trigger: TGGGCCTCCTGATGATGATTCTAGGCCAAATATTCCTGAATGGCAACCAAGCCAAGGAGGCTGAGATTTGGGAAATGCTCTGGAGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCTCCTGCCCACCGGCGTaGGCGTGTAGGAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPSCPPA*ACRSRH
Trigger: GTGTCTGCTCCTACACGCCAACGCCGGTGGGCAGGA...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAGCGGCACAAAGGTGCTaGGGCCCTCAGCGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQAAQRC*GPQRRW
Trigger: CCACCTCCGCTGAGGGCCCAAGCACCTTTGTGCCGC...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAGCTGCCCGGAGGCGCTaGAGGCCTCAGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQAARRR*RPQRWW
Trigger: CCACCATCTCTGAGGCCTCAAGCGCCTCCGGGCAGC...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 90 bp GACTCCCTGGCATGGTTGCCCATAATAAAGATGAAGCTTAGGACCTaGATCAAAAAGTTGTTGCCAGGCCTGTTTGGACTGTCTACGATC +
Preference number: 5 (lower is better)
Translates to: DSLAWLPIIKMKLRT*IKKLLPGLFGLSTI
Trigger: GATCGTAGACAGTCCAAACAGGCCTGGCAACAACTTTTTGATGCAGGTCCTAAGCTTCATCTTTATTATGGGCAACCATGCCAGGGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCTCGCCCCAGCTGCTGTaGTGCGCAGTAGCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPSPQLL*CAVAFA
Trigger: TGCAAAGGCTACTGCGCACAACAGCAGCTGGGGCGA...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACGCAGAACGGAGGTGCTaGGGCCCTCAGAGGCGCAGA +
Preference number: 5 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYAERRC*GPQRRR
Trigger: TCTGCGCCTCTGAGGGCCCAAGCACCTCCGTTCTGC...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAACACCAAGGAGATGCTTaGTCCGTCAGAGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQHQGDA*SVRGGG
Trigger: CCCGCCGCCTCTGACGGACAAAGCATCTCCTTGGTG...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAGAGTCCACGGAGGCCTaGGTTACCCTAGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQESTEA*VTLGLG
Trigger: GCCAAGCCCTAGGGTAACCAAGGCCTCCGTGGACTC...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 90 bp TTTCTTCCATCTCCCTTCGGTTGTACAGAGTATAGGAGTGATTCCTaGGATCAAGTACCACTAGTTCTGTCCCATAGACATGGTTCAGGG +
Preference number: 5 (lower is better)
Translates to: FLPSPFGCTEYRSDS*DQVPLVLSHRHGSG
Trigger: CCCTGAACCATGTCTATGGGACAGAACTAGTGGTACTTGATCCCAGGAATCACTCCTATACTCTGTACAACCGAAGGGAGATGGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAAACAAGGGAACACTaGGAGGGGTTCCGGTCCACA +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPKTREH*EGFRST
Trigger: TGTGGACCGGAACCCCTCCAAGTGTTCCCTTGTTTT...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCTGTTGCCAGGCCTGTTaGGACTGTCTACGATCTCCT +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPCCQAC*DCLRSP
Trigger: AGGAGATCGTAGACAGTCCAAACAGGCCTGGCAACA...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACTCAGGAGGCCCATCTTaGGCCCATTTGGGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYSGGPS*AHLGSL
Trigger: AAGAGAGCCCAAATGGGCCAAAGATGGGCCTCCTGA...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAACAAATCTCAGCCTCCTaGGCTTGGTTGCCATTCAGG +
Preference number: 5 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQQISAS*AWLPFR
Trigger: CCTGAATGGCAACCAAGCCAAGGAGGCTGAGATTTG...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCCCTTGCTCTCCAATCTaGACTCAGGCCATGAATGTG +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPPCSPI*TQAMNV
Trigger: CACATTCATGGCCTGAGTCAAGATTGGAGAGCAAGG...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCACCAGCTTCCTTGCCTaGCTCTCCAATCTTGACTCA +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPTSFLA*LSNLDS
Trigger: TGAGTCAAGATTGGAGAGCAAGGCAAGGAAGCTGGT...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGAGGTCAGGGAACACTTaGCTGCACTCTCGGCCAATG +
Preference number: 5 (lower is better)
Translates to: RDSKWSITFTQSDNILKQRSGNT*LHSRPM
Trigger: CATTGGCCGAGAGTGCAGCAAAGTGTTCCCTGACCT...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCTAGCGGTAATGATGTaGCTGCTGCTGCCAGAACCA +
Preference number: 5 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNLAVMM*LLLPEP
Trigger: TGGTTCTGGCAGCAGCAGCAACATCATTACCGCTAG...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCTGTTCCATAGGGTCTaGGGGCTTCAGGGTAATTGC +
Preference number: 5 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYLFHRV*GLQGNC
Trigger: GCAATTACCCTGAAGCCCCAAGACCCTATGGAACAG...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATACTGCACCAGCTTCCTaGCCTTGCTCTCCAATCTTG +
Preference number: 5 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNTAPAS*PCSPIL
Trigger: CAAGATTGGAGAGCAAGGCAAGGAAGCTGGTGCAGT...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCGTTGTGAACAAAGATTaGCCTGTGCCCAACATCAGC +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPVVNKD*PVPNIS
Trigger: GCTGATGTTGGGCACAGGCAAATCTTTGTTCACAAC...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 90 bp AAAGGCTCTGGCAGCATCTTCTTCCAGAGCTTCGTTGTATTTCTCTaGCCAATCCATAGGATCTTTGTTATATATTTTCGCCATGAACTT +
Preference number: 5 (lower is better)
Translates to: KGSGSIFFQSFVVFL*PIHRIFVIYFRHEL
Trigger: AAGTTCATGGCGAAAATATATAACAAAGATCCTATGGATTGGCCAGAGAAATACAACGAAGCTCTGGAAGAAGATGCTGCCAGAGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCATAATACTAATGGAGTaGGGGCTCTCACAGTCTCTC +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPIILME*GLSQSL
Trigger: GAGAGACTGTGAGAGCCCCAACTCCATTAGTATTAT...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACGCCTCCTTGGCTTGGTaGCCATTCAGGAATATTTGG +
Preference number: 5 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYASLAW*PFRNIW
Trigger: CCAAATATTCCTGAATGGCAACCAAGCCAAGGAGGC...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCCCATACAAACTCATATaGCACTGGATCACTGTCAGG +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPPYKLI*HWITVR
Trigger: CCTGACAGTGATCCAGTGCAATATGAGTTTGTATGG...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAACATCAGCTCTATaGGCCTCATCTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYPTSAL*ASSSIA
Trigger: GGCAATGGAAGATGAGGCCAATAGAGCTGATGTTGG...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATGCAACCCGGGAAGTATaGAGGCCCATAATACTAATG +
Preference number: 5 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNATREV*RPIILM
Trigger: CATTAGTATTATGGGCCTCAATACTTCCCGGGTTGC...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp ATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACTTTCTAGGTGGGATCTaGGGCCCCAGAAAAACTCAT +
Preference number: 5 (lower is better)
Translates to: IKTHTKIQQRQQVVNHIYFLGGI*GPRKTH
Trigger: ATGAGTTTTTCTGGGGCCCAAGATCCCACCTAGAAA...GTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGTCTTCCAGAGCTTCGTaGTATTTCTCTGGCCAATCC +
Preference number: 5 (lower is better)
Translates to: RDSKWSITFTQSDNILKQSSRAS*YFSGQS
Trigger: GGATTGGCCAGAGAAATACAACGAAGCTCTGGAAGA...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGTGCATCAAAAAGTTGTaGCCAGGCCTGTTTGGACTG +
Preference number: 5 (lower is better)
Translates to: RDSKWSITFTQSDNILKQCIKKL*PGLFGL
Trigger: CAGTCCAAACAGGCCTGGCAACAACTTTTTGATGCA...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp TATAGAGCTATCAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATACCTGCATCAAAAAGTaGTTGCCAGGCCTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: YRAIKTHTKIQQRQQVVNTCIKK*LPGLFG
Trigger: TCCAAACAGGCCTGGCAACAACTTTTTGATGCAGGT...ATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTGATAGCTCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp CAAAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCTTCAGAATTTTCATCTaGGTGGTTTCTAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: QNSYQNTTETASGQSHLPFRIFI*VVSRWD
Trigger: ATCCCACCTAGAAACCACCAAGATGAAAATTCTGAA...GGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AAACTCATACCAAAATACAACAGAGACAGCAAGTGGTCAATCACATTTACCCAAAATGTGGGGCATATTTaGAGGAATAGCTGGAAACCT +
Preference number: 5 (lower is better)
Translates to: KLIPKYNRDSKWSITFTQNVGHI*RNSWKP
Trigger: AGGTTTCCAGCTATTCCTCAAAATATGCCCCACATT...TTGGGTAAATGTGATTGACCACTTGCTGTCTCTGTTGTATTTTGGTATGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS-3UTR CAA 90 bp AGAGACAGCAAGTGGTCAATCACATTTACCCAATCAGACAATATATTAAAACAGCAGACAGAAGTCTCTTaGGGTTCCCAAAAATGGAAA +
Preference number: 5 (lower is better)
Translates to: RDSKWSITFTQSDNILKQQTEVS*GSQKWK
Trigger: TTTCCATTTTTGGGAACCCAAAGAGACTTCTGTCTG...CTGTTTTAATATATTGTCTGATTGGGTAAATGTGATTGACCACTTGCTGTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 72 bp CATTTCGCCCCAGCTGCTGTTGTGCGCAGTAGCCTTTaGAACGCGGCGGCGGCGGCGGCGCGAATTCTGGCT +
Preference number: 6 (lower is better)
Translates to: HFAPAAVVRSSL*NAAAAAARILA
Trigger: AGCCAGAATTCGCGCCGCCGCCGCCGCCGCGTTGCAAAGGCTACTGCGCACAACAGCAGCTGGGGCGAAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 72 bp CTGGCTTACCAGAGACATGGTCCTGCCCACCGGCGTTaGCGTGTAGGAGCAGACACCGACAGGCCCGCGATC +
Preference number: 6 (lower is better)
Translates to: LAYQRHGPAHRR*RVGADTDRPAI
Trigger: GATCGCGGGCCTGTCGGTGTCTGCTCCTACACGCCAACGCCGGTGGGCAGGACCATGTCTCTGGTAAGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 72 bp CCCCGCAGAAAGGCCCAGACTGCAGACTCCCTGGCATaGTTGCCCATAATAAAGATGAAGCTTAGGACCTGC +
Preference number: 6 (lower is better)
Translates to: PRRKAQTADSLA*LPIIKMKLRTC
Trigger: GCAGGTCCTAAGCTTCATCTTTATTATGGGCAACCATGCCAGGGAGTCTGCAGTCTGGGCCTTTCTGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp CCCTTAGGACCCTCAGAATCTGAGTCCACGGAGGCCTaGGTTACCCTAGGGCTTGGCAAAACAAGGGAACAC +
Preference number: 6 (lower is better)
Translates to: PLGPSESESTEA*VTLGLGKTREH
Trigger: GTGTTCCCTTGTTTTGCCAAGCCCTAGGGTAACCAAGGCCTCCGTGGACTCAGATTCTGAGGGTCCTAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS TCA 72 bp TCCCGCATTTCAGACTCCCGGATAGGGTACTTGCTCTaGTCCTTCACCAGCAGGAACTGCAACAGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SRISDSRIGYLL*SFTSRNCNSSA
Trigger: AGCTGAGCTGTTGCAGTTCCTGCTGGTGAAGGATCAGAGCAAGTACCCTATCCGGGAGTCTGAAATGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp GTGTGTAGGTGCCTCGGCACAAAACTGCCGCTAGCGGTAATGATGTaGCTGCTGCTGCCAGAACCAAAGTTCCAAGCAACTGCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: VCRCLGTKLPLAVMM*LLLPEPKFQATAEA
Trigger: AGCTTCAGCAGTTGCTTGGAACTTTGGTTCTGGCAGCAGCAGCAACATCATTACCGCTAGCGGCAGTTTTGTGCCGAGGCACCTACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp TGCCTCGGCACAAAACTGCCGCTAGCGGTAATGATGTaGCTGCTGCTGCCAGAACCAAAGTTCCAAGCAACT +
Preference number: 6 (lower is better)
Translates to: CLGTKLPLAVMM*LLLPEPKFQAT
Trigger: AGTTGCTTGGAACTTTGGTTCTGGCAGCAGCAGCAACATCATTACCGCTAGCGGCAGTTTTGTGCCGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp TCCATAGGGTCTTGGGGCTTCAGGGTAATTGCAACCCGGGAAGTATaGAGGCCCATAATACTAATGGAGTTGGGGCTCTCACAGTCTCTC +
Preference number: 6 (lower is better)
Translates to: SIGSWGFRVIATREV*RPIILMELGLSQSL
Trigger: GAGAGACTGTGAGAGCCCCAACTCCATTAGTATTATGGGCCTCAATACTTCCCGGGTTGCAATTACCCTGAAGCCCCAAGACCCTATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp CCCATCCTCCAGAGCATTTCCCAAATCTCAGCCTCCTTGGCTTGGTaGCCATTCAGGAATATTTGGCCTAGAATCATCATCAGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: PILQSISQISASLAW*PFRNIWPRIIIRRP
Trigger: GGGCCTCCTGATGATGATTCTAGGCCAAATATTCCTGAATGGCAACCAAGCCAAGGAGGCTGAGATTTGGGAAATGCTCTGGAGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 72 bp TGCAACAGCTCAGCTACGTTCTGTTCCATAGGGTCTTaGGGCTTCAGGGTAATTGCAACCCGGGAAGTATTG +
Preference number: 6 (lower is better)
Translates to: CNSSATFCSIGS*GFRVIATREVL
Trigger: CAATACTTCCCGGGTTGCAATTACCCTGAAGCCCCAAGACCCTATGGAACAGAACGTAGCTGAGCTGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp CTGCAACAGCTCAGCTACGTTCTGTTCCATAGGGTCTaGGGGCTTCAGGGTAATTGCAACCCGGGAAGTATT +
Preference number: 6 (lower is better)
Translates to: LQQLSYVLFHRV*GLQGNCNPGSI
Trigger: AATACTTCCCGGGTTGCAATTACCCTGAAGCCCCAAGACCCTATGGAACAGAACGTAGCTGAGCTGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp CTAGAATCATCATCAGGAGGCCCATCTTTGGCCCATTaGGGCTCTCTTCTAACCCTTCAAAGGGCACAGGTC +
Preference number: 6 (lower is better)
Translates to: LESSSGGPSLAH*GSLLTLQRAQV
Trigger: GACCTGTGCCCTTTGAAGGGTTAGAAGAGAGCCCAAATGGGCCAAAGATGGGCCTCCTGATGATGATTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp CACTCCAGGTGGGCTGCTGCTCGCCTGAGTATCTCAGGAAACTGGTaGCGATATTCTTTAACAATATATTCCCGCATTTCAGACTCCCGG +
Preference number: 6 (lower is better)
Translates to: HSRWAAARLSISGNW*RYSLTIYSRISDSR
Trigger: CCGGGAGTCTGAAATGCGGGAATATATTGTTAAAGAATATCGCAACCAGTTTCCTGAGATACTCAGGCGAGCAGCAGCCCACCTGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp AGTCTAAGTAACGCTGCCATACAAACTCCACAGACAGAAGTCTCTTaGGGTTCCCAAAAATGGAAAGCCTCCTTTCCCGCTGCACCCCCA +
Preference number: 6 (lower is better)
Translates to: SLSNAAIQTPQTEVS*GSQKWKASFPAAPP
Trigger: TGGGGGTGCAGCGGGAAAGGAGGCTTTCCATTTTTGGGAACCCAAAGAGACTTCTGTCTGTGGAGTTTGTATGGCAGCGTTACTTAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 72 bp TCTCAATTCAAACCTAAAAATGCACTCCAGGTGGGCTaGTGCTCGCCTGAGTATCTCAGGAAACTGGTTGCG +
Preference number: 6 (lower is better)
Translates to: SQFKPKNALQVG*CSPEYLRKLVA
Trigger: CGCAACCAGTTTCCTGAGATACTCAGGCGAGCAGCAGCCCACCTGGAGTGCATTTTTAGGTTTGAATTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 72 bp ACGCTGCCATACAAACTCCACAGACAGAAGTCTCTTTaGGTTCCCAAAAATGGAAAGCCTCCTTTCCCGCTG +
Preference number: 6 (lower is better)
Translates to: TLPYKLHRQKSL*VPKNGKPPFPL
Trigger: CAGCGGGAAAGGAGGCTTTCCATTTTTGGGAACCCAAAGAGACTTCTGTCTGTGGAGTTTGTATGGCAGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 72 bp GAACAAAGATTTGCCTGTGCCCAACATCAGCTCTATTaGCCTCATCTTCCATTGCCTCCCTGTACTGCTGTG +
Preference number: 6 (lower is better)
Translates to: EQRFACAQHQLY*PHLPLPPCTAV
Trigger: CACAGCAGTACAGGGAGGCAATGGAAGATGAGGCCAATAGAGCTGATGTTGGGCACAGGCAAATCTTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp ACCCGGGAAGTATTGAGGCCCATAATACTAATGGAGTaGGGGCTCTCACAGTCTCTCAGGACCTCGAATTCT +
Preference number: 6 (lower is better)
Translates to: TREVLRPIILME*GLSQSLRTSNS
Trigger: AGAATTCGAGGTCCTGAGAGACTGTGAGAGCCCCAACTCCATTAGTATTATGGGCCTCAATACTTCCCGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp TCTTGGGGCTTCAGGGTAATTGCAACCCGGGAAGTATaGAGGCCCATAATACTAATGGAGTTGGGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: SWGFRVIATREV*RPIILMELGLS
Trigger: TGAGAGCCCCAACTCCATTAGTATTATGGGCCTCAATACTTCCCGGGTTGCAATTACCCTGAAGCCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp GTAATTGCAACCCGGGAAGTATTGAGGCCCATAATACTAATGGAGTaGGGGCTCTCACAGTCTCTCAGGACCTCGAATTCTATAGGGCCT +
Preference number: 6 (lower is better)
Translates to: VIATREVLRPIILME*GLSQSLRTSNSIGP
Trigger: AGGCCCTATAGAATTCGAGGTCCTGAGAGACTGTGAGAGCCCCAACTCCATTAGTATTATGGGCCTCAATACTTCCCGGGTTGCAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp ATATTTGGCCTAGAATCATCATCAGGAGGCCCATCTTTGGCCCATTaGGGCTCTCTTCTAACCCTTCAAAGGGCACAGGTCCCAGTTTGT +
Preference number: 6 (lower is better)
Translates to: IFGLESSSGGPSLAH*GSLLTLQRAQVPVC
Trigger: ACAAACTGGGACCTGTGCCCTTTGAAGGGTTAGAAGAGAGCCCAAATGGGCCAAAGATGGGCCTCCTGATGATGATTCTAGGCCAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp CATTCAGGAATATTTGGCCTAGAATCATCATCAGGAGGCCCATCTTaGGCCCATTTGGGCTCTCTTCTAACCCTTCAAAGGGCACAGGTC +
Preference number: 6 (lower is better)
Translates to: HSGIFGLESSSGGPS*AHLGSLLTLQRAQV
Trigger: GACCTGTGCCCTTTGAAGGGTTAGAAGAGAGCCCAAATGGGCCAAAGATGGGCCTCCTGATGATGATTCTAGGCCAAATATTCCTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp CCTTGCTCTCCAATCTTGACTCAGGCCATGAATGTGGGGCATATTTaGAGGAATAGCTGGAAACCTCTGAATCAGGGGATGGTACCTCTG +
Preference number: 6 (lower is better)
Translates to: PCSPILTQAMNVGHI*RNSWKPLNQGMVPL
Trigger: CAGAGGTACCATCCCCTGATTCAGAGGTTTCCAGCTATTCCTCAAAATATGCCCCACATTCATGGCCTGAGTCAAGATTGGAGAGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS TCA 72 bp CCCTCTGACTGCCATGCATTCCTCTACCTGAAGTTGTaGACAAAGATTTGCCTGTGCCCAACATCAGCTCTA +
Preference number: 6 (lower is better)
Translates to: PSDCHAFLYLKL*TKICLCPTSAL
Trigger: TAGAGCTGATGTTGGGCACAGGCAAATCTTTGTTCACAACTTCAGGTAGAGGAATGCATGGCAGTCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 72 bp CAATTCAAACCTAAAAATGCACTCCAGGTGGGCTGCTaGTCGCCTGAGTATCTCAGGAAACTGGTTGCGATA +
Preference number: 6 (lower is better)
Translates to: QFKPKNALQVGC*SPEYLRKLVAI
Trigger: TATCGCAACCAGTTTCCTGAGATACTCAGGCGAGCAGCAGCCCACCTGGAGTGCATTTTTAGGTTTGAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 72 bp CCATCCTCCAGAGCATTTCCCAAATCTCAGCCTCCTTaGCTTGGTTGCCATTCAGGAATATTTGGCCTAGAA +
Preference number: 6 (lower is better)
Translates to: PSSRAFPKSQPP*LGCHSGIFGLE
Trigger: TTCTAGGCCAAATATTCCTGAATGGCAACCAAGCCAAGGAGGCTGAGATTTGGGAAATGCTCTGGAGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp AACGCTGCCATACAAACTCCACAGACAGAAGTCTCTTaGGGTTCCCAAAAATGGAAAGCCTCCTTTCCCGCT +
Preference number: 6 (lower is better)
Translates to: NAAIQTPQTEVS*GSQKWKASFPA
Trigger: AGCGGGAAAGGAGGCTTTCCATTTTTGGGAACCCAAAGAGACTTCTGTCTGTGGAGTTTGTATGGCAGCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp TCCATAAGCAGAAATAACTGCACCAGCTTCCTTGCCTaGCTCTCCAATCTTGACTCAGGCCATGAATGTGGG +
Preference number: 6 (lower is better)
Translates to: SISRNNCTSFLA*LSNLDSGHECG
Trigger: CCCACATTCATGGCCTGAGTCAAGATTGGAGAGCAAGGCAAGGAAGCTGGTGCAGTTATTTCTGCTTATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 72 bp GTTCTGTTCCATAGGGTCTTGGGGCTTCAGGGTAATTaGAACCCGGGAAGTATTGAGGCCCATAATACTAAT +
Preference number: 6 (lower is better)
Translates to: VLFHRVLGLQGN*NPGSIEAHNTN
Trigger: ATTAGTATTATGGGCCTCAATACTTCCCGGGTTGCAATTACCCTGAAGCCCCAAGACCCTATGGAACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp CCAATCTTGACTCAGGCCATGAATGTGGGGCATATTTaGAGGAATAGCTGGAAACCTCTGAATCAGGGGATG +
Preference number: 6 (lower is better)
Translates to: PILTQAMNVGHI*RNSWKPLNQGM
Trigger: CATCCCCTGATTCAGAGGTTTCCAGCTATTCCTCAAAATATGCCCCACATTCATGGCCTGAGTCAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp CCATGCATTCCTCTACCTGAAGTTGTGAACAAAGATTaGCCTGTGCCCAACATCAGCTCTATTGGCCTCATC +
Preference number: 6 (lower is better)
Translates to: PCIPLPEVVNKD*PVPNISSIGLI
Trigger: GATGAGGCCAATAGAGCTGATGTTGGGCACAGGCAAATCTTTGTTCACAACTTCAGGTAGAGGAATGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 72 bp GCATGGTTGCCCATAATAAAGATGAAGCTTAGGACCTaGATCAAAAAGTTGTTGCCAGGCCTGTTTGGACTG +
Preference number: 6 (lower is better)
Translates to: AWLPIIKMKLRT*IKKLLPGLFGL
Trigger: CAGTCCAAACAGGCCTGGCAACAACTTTTTGATGCAGGTCCTAAGCTTCATCTTTATTATGGGCAACCATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 72 bp AGGTGGGCTGCTGCTCGCCTGAGTATCTCAGGAAACTaGTTGCGATATTCTTTAACAATATATTCCCGCATT +
Preference number: 6 (lower is better)
Translates to: RWAAARLSISGN*LRYSLTIYSRI
Trigger: AATGCGGGAATATATTGTTAAAGAATATCGCAACCAGTTTCCTGAGATACTCAGGCGAGCAGCAGCCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 72 bp TCTCCCTTCGGTTGTACAGAGTATAGGAGTGATTCCTaGGATCAAGTACCACTAGTTCTGTCCCATAGACAT +
Preference number: 6 (lower is better)
Translates to: SPFGCTEYRSDS*DQVPLVLSHRH
Trigger: ATGTCTATGGGACAGAACTAGTGGTACTTGATCCCAGGAATCACTCCTATACTCTGTACAACCGAAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp CAGAGCATTTCCCAAATCTCAGCCTCCTTGGCTTGGTaGCCATTCAGGAATATTTGGCCTAGAATCATCATC +
Preference number: 6 (lower is better)
Translates to: QSISQISASLAW*PFRNIWPRIII
Trigger: GATGATGATTCTAGGCCAAATATTCCTGAATGGCAACCAAGCCAAGGAGGCTGAGATTTGGGAAATGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp GCAAAGGCTCTGGCAGCATCTTCTTCCAGAGCTTCGTaGTATTTCTCTGGCCAATCCATAGGATCTTTGTTA +
Preference number: 6 (lower is better)
Translates to: AKALAASSSRAS*YFSGQSIGSLL
Trigger: TAACAAAGATCCTATGGATTGGCCAGAGAAATACAACGAAGCTCTGGAAGAAGATGCTGCCAGAGCCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp TTAGGACCTGCATCAAAAAGTTGTTGCCAGGCCTGTTaGGACTGTCTACGATCTCCTCAGTTTCTTCCATCT +
Preference number: 6 (lower is better)
Translates to: LGPASKSCCQAC*DCLRSPQFLPS
Trigger: AGATGGAAGAAACTGAGGAGATCGTAGACAGTCCAAACAGGCCTGGCAACAACTTTTTGATGCAGGTCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp TTGCCCATAATAAAGATGAAGCTTAGGACCTGCATCAAAAAGTTGTaGCCAGGCCTGTTTGGACTGTCTACGATCTCCTCAGTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: LPIIKMKLRTCIKKL*PGLFGLSTISSVSS
Trigger: GGAAGAAACTGAGGAGATCGTAGACAGTCCAAACAGGCCTGGCAACAACTTTTTGATGCAGGTCCTAAGCTTCATCTTTATTATGGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp TGGTTGCCCATAATAAAGATGAAGCTTAGGACCTGCATCAAAAAGTaGTTGCCAGGCCTGTTTGGACTGTCTACGATCTCCTCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: WLPIIKMKLRTCIKK*LPGLFGLSTISSVS
Trigger: AGAAACTGAGGAGATCGTAGACAGTCCAAACAGGCCTGGCAACAACTTTTTGATGCAGGTCCTAAGCTTCATCTTTATTATGGGCAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS GCA 72 bp AGAGCATTTCCCAAATCTCAGCCTCCTTGGCTTGGTTaGCATTCAGGAATATTTGGCCTAGAATCATCATCA +
Preference number: 6 (lower is better)
Translates to: RAFPKSQPPWLG*HSGIFGLESSS
Trigger: TGATGATGATTCTAGGCCAAATATTCCTGAATGGCAACCAAGCCAAGGAGGCTGAGATTTGGGAAATGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp TGGGCTGCTGCTCGCCTGAGTATCTCAGGAAACTGGTaGCGATATTCTTTAACAATATATTCCCGCATTTCA +
Preference number: 6 (lower is better)
Translates to: WAAARLSISGNW*RYSLTIYSRIS
Trigger: TGAAATGCGGGAATATATTGTTAAAGAATATCGCAACCAGTTTCCTGAGATACTCAGGCGAGCAGCAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp ATAAAGATGAAGCTTAGGACCTGCATCAAAAAGTTGTaGCCAGGCCTGTTTGGACTGTCTACGATCTCCTCA +
Preference number: 6 (lower is better)
Translates to: IKMKLRTCIKKL*PGLFGLSTISS
Trigger: TGAGGAGATCGTAGACAGTCCAAACAGGCCTGGCAACAACTTTTTGATGCAGGTCCTAAGCTTCATCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp CAACCCTCAGCAAAGGCTCTGGCAGCATCTTCTTCCAGAGCTTCGTaGTATTTCTCTGGCCAATCCATAGGATCTTTGTTATATATTTTC +
Preference number: 6 (lower is better)
Translates to: QPSAKALAASSSRAS*YFSGQSIGSLLYIF
Trigger: GAAAATATATAACAAAGATCCTATGGATTGGCCAGAGAAATACAACGAAGCTCTGGAAGAAGATGCTGCCAGAGCCTTTGCTGAGGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 90 bp TTAGTTGAATCCATAAGCAGAAATAACTGCACCAGCTTCCTTGCCTaGCTCTCCAATCTTGACTCAGGCCATGAATGTGGGGCATATTTT +
Preference number: 6 (lower is better)
Translates to: LVESISRNNCTSFLA*LSNLDSGHECGAYF
Trigger: AAAATATGCCCCACATTCATGGCCTGAGTCAAGATTGGAGAGCAAGGCAAGGAAGCTGGTGCAGTTATTTCTGCTTATGGATTCAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CAA 72 bp ATAATAAAGATGAAGCTTAGGACCTGCATCAAAAAGTaGTTGCCAGGCCTGTTTGGACTGTCTACGATCTCC +
Preference number: 6 (lower is better)
Translates to: IIKMKLRTCIKK*LPGLFGLSTIS
Trigger: GGAGATCGTAGACAGTCCAAACAGGCCTGGCAACAACTTTTTGATGCAGGTCCTAAGCTTCATCTTTATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361470.4
CDS CCA 72 bp GGCAGCATCTTCTTCCAGAGCTTCGTTGTATTTCTCTaGCCAATCCATAGGATCTTTGTTATATATTTTCGC +
Preference number: 6 (lower is better)
Translates to: GSIFFQSFVVFL*PIHRIFVIYFR
Trigger: GCGAAAATATATAACAAAGATCCTATGGATTGGCCAGAGAAATACAACGAAGCTCTGGAAGAAGATGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361470.4