RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAGED1 (Homo sapiens)

Ensembl gene IDs: ENSG00000179222

Ensembl transcript IDs: ENST00000326587.12, ENST00000375695.2, ENST00000375722.5, ENST00000375772.7, ENST00000470461.1, ENST00000473931.1, ENST00000482188.1, ENST00000482599.1, ENST00000485420.5, ENST00000494718.5

Found 507 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACAGTCTGGAGGACCCTaGCAGCCCGGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRQSGGP*QPGGVC
Trigger: GCAGACCCCACCGGGCTGGCAGGGTCCTCCAGACTG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGGCAAGAGCGGAGCCTaGGGGCTTGCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNGKSGA*GLASGP
Trigger: GGGGCCTGAGGCAAGCCCCCAGGCTCCGCTCTTGCC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326587.12
ENST00000375695.2
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGGTCCCTGCAGCCAGTaGGGCCCGCCTCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNGPCSQ*GPPLIP
Trigger: GGGGATCAGAGGCGGGCCCCACTGGCTGCAGGGACC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACTAGCTGGAGGGCTCTaGCGTGCTGGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRLAGGL*RAGGVC
Trigger: GCAGACCCCACCAGCACGTCAGAGCCCTCCAGCTAG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATGGAGGGCTCTGACGTaGTGGTGGGGTCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRWRALT*WWGLPG
Trigger: GCCAGGCAGACCCCACCAGCACGTCAGAGCCCTCCA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAAGGACCTTGCCAGTCTaGAGGACCCTGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRRTLPV*RTLPAR
Trigger: CCGGGCTGGCAGGGTCCTCCAGACTGGCAAGGTCCT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGGCAGTTGGGGGCTGTaGACTCTGGGGACTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRGSWGL*TLGTSS
Trigger: GCTGCTAGTCCCCAGAGTTCACAGCCCCCAACTGCC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAAGTGGGGCCCGCCTCTaGTCCCCACTGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRSGARL*SPLLFS
Trigger: AGAGAACAGCAGTGGGGATCAGAGGCGGGCCCCACT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATGGTCGTTCCCAGTATaGCAGCCAGGGACTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRWSFPV*QPGTRG
Trigger: CCCCCGAGTCCCTGGCTGGCATACTGGGAACGACCA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATCCCATGCGGGTTCTTaGTTCAGCCCGGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRSHAGS*FSPGFG
Trigger: GCCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGGGGGCTGTGAACTCTaGGGACTAGCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRGGCEL*GLAAAV
Trigger: CACCGCAGCTGCTAGTCCCCAGAGTTCACAGCCCCC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGTTCTGCCAGGCTGGTaGGGTCTGCCTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRVLPGW*GLPSWR
Trigger: CCTCCAGCTAGGCAGACCCCACCAGCCTGGCAGAAC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACAGGACCTTGCCAGTCTaGAGGACCCTGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNRTLPV*RTLPAR
Trigger: CCGGGCTGGCAGGGTCCTCCAGACTGGCAAGGTCCT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGGCAGTTGGGGGCTGTaGACTCTGGGGACTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNGSWGL*TLGTSS
Trigger: GCTGCTAGTCCCCAGAGTTCACAGCCCCCAACTGCC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACAGTGGGGCCCGCCTCTaGTCCCCACTGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNSGARL*SPLLFS
Trigger: AGAGAACAGCAGTGGGGATCAGAGGCGGGCCCCACT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGGACCGGCAAAGGTCTaGGGGAATCTGGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNGPAKV*GNLERA
Trigger: TGCCCGCTCCAGATTCCCTCAGACCTTTGCCGGTCC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGGTCACTGGAACTGGTaGAGACCTCCAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRGHWNW*RPPGPC
Trigger: GCAGGGACCTGGAGGTCTGCACCAGTTCCAGTGACC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACAGTCAGGAGGACCTTaGCAGTCTGGAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRQSGGP*QSGGPC
Trigger: GCAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACTGGTCGTTCCCAGTATaGCAGCCAGGGACTCGGGGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNWSFPV*QPGTRG
Trigger: CCCCCGAGTCCCTGGCTGGCATACTGGGAACGACCA...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGTCTGCCTGGCTGTCTaGTTTTGCCAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRVCLAV*FCQPEG
Trigger: CCCCTCAGGCTGGCAAAACCAGACAGCCAGGCAGAC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATAGGACCTTGCCAGTCTaGAGGACCCTGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHRTLPV*RTLPAR
Trigger: CCGGGCTGGCAGGGTCCTCCAGACTGGCAAGGTCCT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGCGCCAGGTGGGTTCTaGGTGGTCACTGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNAPGGF*VVTGTG
Trigger: ACCAGTTCCAGTGACCACTCAGAACCCACCTGGCGC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGCAGCAACGATGGCGTaGCCGGAAGTGCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNAATMA*PEVLSS
Trigger: AGAGGACAGCACTTCCGGTCACGCCATCGTTGCTGC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCTGGGGACTAGCAGCTaGGGTGGCCTGGTTAGTAGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNLGTSS*GGLVSR
Trigger: CCTACTAACCAGGCCACCGCAGCTGCTAGTCCCCAG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGGTCACTGGAACTGGTaGAGACCTCCAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNGHWNW*RPPGPC
Trigger: GCAGGGACCTGGAGGTCTGCACCAGTTCCAGTGACC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCGTGCTGGTGGGGTCTaGCTGGCTGTCTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNRAGGV*LAVWFC
Trigger: GCAAAACCAGACAGCCAGGCAGACCCCACCAGCACG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGAGGGGCGCAGGTTCTaGCAGTCAGGTGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNEGRRF*QSGGIG
Trigger: GCCAATTCCACCTGACTGGCAGAACCTGCGCCCCTC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTGGTCGTTCCCAGTATaGCAGCCAGGGACTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHWSFPV*QPGTRG
Trigger: CCCCCGAGTCCCTGGCTGGCATACTGGGAACGACCA...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACACGCTCCAAGAGGCGTaGAGTAGCAGCTCAGGACGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNTLQEA*SSSSGR
Trigger: CCGTCCTGAGCTGCTACTGCACGCCTCTTGGAGCGT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375695.2
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGCAAGAGCGGAGCCTaGGGGCTTGCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAGKSGA*GLASGP
Trigger: GGGGCCTGAGGCAAGCCCCCAGGCTCCGCTCTTGCC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326587.12
ENST00000375695.2
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGTCCCTGCAGCCAGTaGGGCCCGCCTCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAGPCSQ*GPPLIP
Trigger: GGGGATCAGAGGCGGGCCCCACTGGCTGCAGGGACC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGTTCTGCCAGGCTGGTaGGGTCTGCCTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHVLPGW*GLPSWR
Trigger: CCTCCAGCTAGGCAGACCCCACCAGCCTGGCAGAAC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGGCCGGGCCAGACAATaGGGTTTGGCCAGATCACTG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNGRARQ*GLARSL
Trigger: CAGTGATCTGGCCAAACCCCATTGTCTGGCCCGGCC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAAGTCTGCCATCCAGGTaGATTCTGCCAGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRSLPSR*ILPGQW
Trigger: CCACTGGCCTGGCAGAATCCACCTGGATGGCAGACT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCAAGCGTCAGGATTCTaGAAGCCGAGGAGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNQASGF*KPRRPA
Trigger: TGCGGGCCTCCTCGGCTTCCAGAATCCTGACGCTTG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375695.2
CDS-3UTR TCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACCTAGCGGCAGCTGCTaGAACCTGAATGTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRPSGSC*NLNVSH
Trigger: ATGGCTGACATTCAGGTTTCAGCAGCTGCCGCTAGG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCTGGTTTTGCCAGCCTaGGGGGTTCTGCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNLVLPA*GVLPSQ
Trigger: TTGGCTTGGCAGAACCCCTCAGGCTGGCAAAACCAG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACTCAGAGGATCGGGATTaGTGGGCTCGGCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNSEDRD*WARLSA
Trigger: TGCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGA...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCTGGGGACTAGCAGCTaGGGTGGCCTGGTTAGTAGG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHLGTSS*GGLVSR
Trigger: CCTACTAACCAGGCCACCGCAGCTGCTAGTCCCCAG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGGTCACTGGAACTGGTaGAGACCTCCAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHGHWNW*RPPGPC
Trigger: GCAGGGACCTGGAGGTCTGCACCAGTTCCAGTGACC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCAGTCTGGAGGACCCTaGCAGCCCGGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAQSGGP*QPGGVC
Trigger: GCAGACCCCACCGGGCTGGCAGGGTCCTCCAGACTG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCAGTCTGGAGGACCCTaGCAGCCCGGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSQSGGP*QPGGVC
Trigger: GCAGACCCCACCGGGCTGGCAGGGTCCTCCAGACTG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCAGTCAGGAGGACCTTaGCAGTCTGGAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHQSGGP*QSGGPC
Trigger: GCAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGGCTTCGGCCTCAGCTaGAGCAGCATCCAGAGCATC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHGFGLS*SSIQSI
Trigger: GATGCTCTGGATGCTGCTGCAGCTGAGGCCGAAGCC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTACGGAGGCCTCAGCCTaGAAGCCGAGGAGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVATEASA*KPRRPA
Trigger: TGCGGGCCTCCTCGGCTTCCAGGCTGAGGCCTCCGT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGCAGCTGCGGTGGCCTaGTTAGTAGGTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHAAAVA*LVGGAS
Trigger: AGAGGCTCCACCTACTAACCAGGCCACCGCAGCTGC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGGTCCCTGCAGCCAGTaGGGCCCGCCTCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWGPCSQ*GPPLIP
Trigger: GGGGATCAGAGGCGGGCCCCACTGGCTGCAGGGACC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGTTCTGCCAAGCGACTaGGTTCTGCCAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHVLPSD*VLPGWW
Trigger: CCACCAGCCTGGCAGAACCCAGTCGCTTGGCAGAAC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAATTCTGCCAGGCCAGTaGATTCGGCCAGACAACAGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRILPGQ*IRPDNR
Trigger: CCTGTTGTCTGGCCGAATCCACTGGCCTGGCAGAAT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACAGTCTGCCATCCAGGTaGATTCTGCCAGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNSLPSR*ILPGQW
Trigger: CCACTGGCCTGGCAGAATCCACCTGGATGGCAGACT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATAAGTGGCCAATCAGGTaGCAGTGGCCAGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHKWPIR*QWPVGW
Trigger: CCACCCGACTGGCCACTGCCACCTGATTGGCCACTT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCCAGTCAGTGGGAAGTaGCCAATCAGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNPVSGK*PIRWQW
Trigger: CCACTGCCACCTGATTGGCCACTTCCCACTGACTGG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGTAGTGGCCAGTCAGTaGGAAGTGGCCAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRVVASQ*EVANQV
Trigger: CACCTGATTGGCCACTTCCCACTGACTGGCCACTAC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCTGGAGCGGGCATTCTaGTGGTATCTGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNLERAF*WYLAQK
Trigger: CTTCTGGGCCAGATACCACCAGAATGCCCGCTCCAG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAAGGTCTGAGGGAATCTaGAGCGGGCATTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRRSEGI*SGHSGG
Trigger: ACCACCAGAATGCCCGCTCCAGATTCCCTCAGACCT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAAGTTGGCAGCGAAGTTaGCACTGGCTGTACCACCAG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRSWQRS*HWLYHQ
Trigger: CTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCCACAGTCCATTTTCTaGGCCATGGCTCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNPQSIF*AMAPVP
Trigger: AGGGACAGGAGCCATGGCTCAGAAAATGGACTGTGG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCCTAGCGGCAGCTGCTaGAACCTGAATGTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNPSGSC*NLNVSH
Trigger: ATGGCTGACATTCAGGTTTCAGCAGCTGCCGCTAGG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCTGGTTTTGCCAGCCTaGGGGGTTCTGCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHLVLPA*GVLPSQ
Trigger: TTGGCTTGGCAGAACCCCTCAGGCTGGCAAAACCAG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTAGCTGGAGGGCTCTaGCGTGCTGGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVALAGGL*RAGGVC
Trigger: GCAGACCCCACCAGCACGTCAGAGCCCTCCAGCTAG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTCAGAGGATCGGGATTaGTGGGCTCGGCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHSEDRD*WARLSA
Trigger: TGCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGA...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTGGAGGGCTCTGACGTaGTGGTGGGGTCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAWRALT*WWGLPG
Trigger: GCCAGGCAGACCCCACCAGCACGTCAGAGCCCTCCA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACAAATCACTGGGTTCTaGCAAGCGACTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRQITGF*QATGFC
Trigger: GCAGAACCCAGTCGCTTGGCAGAACCCAGTGATTTG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCATCCAGGTGGATTCTaGCAGGCCAGTGGATTCGGC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHHPGGF*QASGFG
Trigger: GCCGAATCCACTGGCCTGGCAGAATCCACCTGGATG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACAGTCTGGAGGACCCTaGCAGCCCGGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRQSGGP*QPGGVC
Trigger: GCAGACCCCACCGGGCTGGCAGGGTCCTCCAGACTG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACAGCCTCCATGAACTGTaGAGTCCAGTCACGAGGGTC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNSLHEL*SPVTRV
Trigger: GACCCTCGTGACTGGACTGCACAGTTCATGGAGGCT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAACGGAGGCCTCAGCCTaGAAGCCGAGGAGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRTEASA*KPRRPA
Trigger: TGCGGGCCTCCTCGGCTTCCAGGCTGAGGCCTCCGT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGGAGCCTCTGAGATCTaGATGGCCTCCATCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNGASEI*MASIKV
Trigger: GACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACCTTGGGCTGCGTGTTaGGCACATCCTTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRPWAAC*AHPWHY
Trigger: ATAATGCCAAGGATGTGCCCAACACGCAGCCCAAGG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGTTCTGAGTGGTCACTaGAACTGGTGCAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRVLSGH*NWCRPP
Trigger: TGGAGGTCTGCACCAGTTCCAGTGACCACTCAGAAC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGTTTGGCCAAATCACTaGGTTCTGCCAAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRVWPNH*VLPSDW
Trigger: CCAGTCGCTTGGCAGAACCCAGTGATTTGGCCAAAC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTCTGCCAGGCCAGTaGATTCGGCCAGACAACAGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNILPGQ*IRPDNR
Trigger: CCTGTTGTCTGGCCGAATCCACTGGCCTGGCAGAAT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATAGTCTGCCATCCAGGTaGATTCTGCCAGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHSLPSR*ILPGQW
Trigger: CCACTGGCCTGGCAGAATCCACCTGGATGGCAGACT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAAGAGGAGACCGAGCTTaGGTGTGTCTTTGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRRGDRA*VCLWSF
Trigger: GAACGACCAAAGACACACCCAAGCTCGGTCTCCTCT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGAGCGGGCATTCTGGTaGTATCTGGCCCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNERAFW*YLAQKV
Trigger: TACCTTCTGGGCCAGATACCACCAGAATGCCCGCTC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCTGGAGCGGGCATTCTaGTGGTATCTGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHLERAF*WYLAQK
Trigger: CTTCTGGGCCAGATACCACCAGAATGCCCGCTCCAG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACAATGGCACCAAAGTTaGCAGCGAAGTTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRQWHQS*QRSWHW
Trigger: CCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACAGAAGGCAGCAACGATaGCGTGACCGGAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNRRQQR*RDRKCC
Trigger: ACAGCACTTCCGGTCACGCCATCGTTGCTGCCTTCT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS-3UTR TCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATAGTAGGTGGAGCCTCTaGGATCTGGATGGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHSRWSL*DLDGLH
Trigger: ATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGGCAGTTGGGGGCTGTaGACTCTGGGGACTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSGSWGL*TLGTSS
Trigger: GCTGCTAGTCCCCAGAGTTCACAGCCCCCAACTGCC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGCAGCTGCTGAAACCTaGATGTCAGCCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRAAAET*MSAISL
Trigger: CAATGAGATGGCTGACATTCAGGTTTCAGCAGCTGC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCTGGACTTTAAAGGCTaGCTTAGGCCTAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHLDFKG*LRPSGS
Trigger: GCTGCCGCTAGGCCTAAGTCAGCCTTTAAAGTCCAG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACTGGCATTCTGGGCCTTaGAGGCCATCTCAGACTTGT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNWHSGP*RPSQTC
Trigger: ACAAGTCTGAGATGGCCTTCAAGGCCCAGAATGCCA...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGTGGCCATTTTGGCCTaGTTTACATTCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRVAILA*FTFWVW
Trigger: CCAGACCCAGAATGTAAATCAGGCCAAAATGGCCAC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTAGCTGGAGGGCTCTaGCGTGCTGGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWLAGGL*RAGGVC
Trigger: GCAGACCCCACCAGCACGTCAGAGCCCTCCAGCTAG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCCCCAACCCCCTCGCTaGCTCCCTTCTTCACGACTC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAPQPPR*LPSSRL
Trigger: GAGTCGTGAAGAAGGGAGGCAGCGAGGGGGTTGGGG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGATGGAGGGCTCTGACGTaGTGGTGGGGTCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRWRALT*WWGLPG
Trigger: GCCAGGCAGACCCCACCAGCACGTCAGAGCCCTCCA...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTCCCATGCGGGTTCTTaGTTCAGCCCGGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSSHAGS*FSPGFG
Trigger: GCCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTCCCATGCGGGTTCTTaGTTCAGCCCGGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVASHAGS*FSPGFG
Trigger: GCCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCATCTCCAATTCCCATaGGGGTTCTTGCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNHLQFP*GFLLQP
Trigger: GGGCTGAAGCAAGAACCCGCATGGGAATTGGAGATG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGCAAGAGCGGAGCCTTaGCTCAGGCCCCAACCCCAA +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAARAEP*LRPQPQ
Trigger: TTGGGGTTGGGGCCTGAGGCAAGGCTCCGCTCTTGC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375722.5
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGAGGGGGTGACAGACTaGTCTACAAGCGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNEGVTD*STSVRI
Trigger: AATCCTGACGCTTGTAGAGCAGTCTGTCACCCCCTC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375695.2
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGAGGATCGGGATTGCTaGGCTCGGCTCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAEDRDC*ARLSAA
Trigger: GGCTGCTGAGAGCCGAGCCCAGCAATCCCGATCCTC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCCATTTTCTGAGCCATaGCTCCTGTCCCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNPFSEP*LLSLWQ
Trigger: TTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGGGGCTGTGAACTCTaGGGACTAGCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAGGCEL*GLAAAV
Trigger: CACCGCAGCTGCTAGTCCCCAGAGTTCACAGCCCCC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAAGGTTCAGAGATACCTaGGTCGGTCTCTATGTCAGC +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRRFRDT*VGLYVS
Trigger: GCTGACATAGAGACCGACCCAGGTATCTCTGAACCT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTCTGCCAGAGCACATTaGGGGGTGCGCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVASARAH*GVRQVG
Trigger: ACCCACCTGGCGCACCCCCCAATGTGCTCTGGCAGA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTCTGCCAGAGCACATTaGGGGGTGCGCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSSARAH*GVRQVG
Trigger: ACCCACCTGGCGCACCCCCCAATGTGCTCTGGCAGA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGTTCTGCCAAGCCAATaGCGTCTGCCAGAGCACATT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNVLPSQ*RLPEHI
Trigger: AATGTGCTCTGGCAGACGCCATTGGCTTGGCAGAAC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGCTCTGACGTGCTGGTaGGGTCTGCCTGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAALTCW*GLPGCL
Trigger: CAGACAGCCAGGCAGACCCCACCAGCACGTCAGAGC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGCTCTGACGTGCTGGTaGGGTCTGCCTGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSALTCW*GLPGCL
Trigger: CAGACAGCCAGGCAGACCCCACCAGCACGTCAGAGC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTGGGGTCTGCCTAGCTaGAGGGCTCTGACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAWGLPS*RALTCW
Trigger: CCAGCACGTCAGAGCCCTCCAGCTAGGCAGACCCCA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTGGGGTCTGCCTAGCTaGAGGGCTCTGACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSWGLPS*RALTCW
Trigger: CCAGCACGTCAGAGCCCTCCAGCTAGGCAGACCCCA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGTTTGGCCAAATCACTaGGTTCTGCCAAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNVWPNH*VLPSDW
Trigger: CCAGTCGCTTGGCAGAACCCAGTGATTTGGCCAAAC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGTTTGGCCAGATCACTaGGTTCTGCCAGATTACTGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRVWPDH*VLPDYW
Trigger: CCAGTAATCTGGCAGAACCCAGTGATCTGGCCAAAC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCCAGACAATGGGGTTTaGCCAGATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNPDNGV*PDHWVL
Trigger: CAGAACCCAGTGATCTGGCCAAACCCCATTGTCTGG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATATTCTGCCAGGCCAGTaGATTCGGCCAGACAACAGG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHILPGQ*IRPDNR
Trigger: CCTGTTGTCTGGCCGAATCCACTGGCCTGGCAGAAT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAGGACCTTGCCAGTCTaGAGGACCCTGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWRTLPV*RTLPAR
Trigger: CCGGGCTGGCAGGGTCCTCCAGACTGGCAAGGTCCT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGAGCGGGCATTCTGGTaGTATCTGGCCCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHERAFW*YLAQKV
Trigger: TACCTTCTGGGCCAGATACCACCAGAATGCCCGCTC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCAGCGAAGTTGGCACTaGCTGTACCACCAGGACCAA +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHQRSWH*LYHQDQ
Trigger: TTGGTCCTGGTGGTACAGCCAGTGCCAACTTCGCTG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATAGTTGGCAGCGAAGTTaGCACTGGCTGTACCACCAG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHSWQRS*HWLYHQ
Trigger: CTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACCCAGAAGAAACCAATaGCACCAAAGTTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRPRRNQ*HQSWQR
Trigger: TCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGGCAAGAGCGGAGCCTaGGGGCTTGACGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSGKSGA*GLDEEG
Trigger: GCCTTCTTCGTCAAGCCCCCAGGCTCCGCTCTTGCC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGCAGCTGCTGAAACCTaGATGTCAGCCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNAAAET*MSAISL
Trigger: CAATGAGATGGCTGACATTCAGGTTTCAGCAGCTGC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTGGCATTCTGGGCCTTaGAGGCCATCTCAGACTTGT +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHWHSGP*RPSQTC
Trigger: ACAAGTCTGAGATGGCCTTCAAGGCCCAGAATGCCA...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGTGGCCATTTTGGCCTaGTTTACATTCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNVAILA*FTFWVW
Trigger: CCAGACCCAGAATGTAAATCAGGCCAAAATGGCCAC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAAGTGGGGCCCGCCTCTaGTCCCCACTGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRSGARL*SPLLFS
Trigger: AGAGAACAGCAGTGGGGATCAGAGGCGGGCCCCACT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAGTGGGGCCCGCCTCTaGTCCCCACTGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSGARL*SPLLFS
Trigger: AGAGAACAGCAGTGGGGATCAGAGGCGGGCCCCACT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGCGCCAGGTGGGTTCTaGGTGGTCACTGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSAPGGF*VVTGTG
Trigger: ACCAGTTCCAGTGACCACTCAGAACCCACCTGGCGC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGCACCTGGGTTCTGTaGGGCACGCGAGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSSTWVL*GTRVGR
Trigger: TCTCCCAACTCGCGTGCCTCACAGAACCCAGGTGCT...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTATTTGCTCTTTCCTaGAGAAGGGCCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRLFALS*RRATSR
Trigger: CCGAGATGTGGCCCTTCTTCAGGAAAGAGCAAATAA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGGACCGGCAAAGGTCTaGGGGAATCTGGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWGPAKV*GNLERA
Trigger: TGCCCGCTCCAGATTCCCTCAGACCTTTGCCGGTCC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGGACCGGCAAAGGTCTaGGGGAATCTGGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRGPAKV*GNLERA
Trigger: TGCCCGCTCCAGATTCCCTCAGACCTTTGCCGGTCC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCCCCAACCCCCTCGCTaGCTCCCTTCTTCACGACTC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWPQPPR*LPSSRL
Trigger: GAGTCGTGAAGAAGGGAGGCAGCGAGGGGGTTGGGG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTGGGGACTAGCAGCTaGGGTGGCCTGGTTAGTAGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVALGTSS*GGLVSR
Trigger: CCTACTAACCAGGCCACCGCAGCTGCTAGTCCCCAG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGCCTCTGATCCCCACTaGTGTTCTCTTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRASDPH*CSLQHS
Trigger: TGAATGTTGAAGAGAACAGCAGTGGGGATCAGAGGC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGTCACTGGAACTGGTaGAGACCTCCAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAGHWNW*RPPGPC
Trigger: GCAGGGACCTGGAGGTCTGCACCAGTTCCAGTGACC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCAGCCTGAGGGGTTCTaGCAAGCCAATGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAQPEGF*QANGVC
Trigger: GCAGACGCCATTGGCTTGGCAGAACCCCTCAGGCTG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCAGCCTGAGGGGTTCTaGCAAGCCAATGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSQPEGF*QANGVC
Trigger: GCAGACGCCATTGGCTTGGCAGAACCCCTCAGGCTG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCAGTCAGGAGGACCTTaGCAGTCTGGAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSQSGGP*QSGGPC
Trigger: GCAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGAGGGGCGCAGGTTCTaGCAGTCAGGTGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSEGRRF*QSGGIG
Trigger: GCCAATTCCACCTGACTGGCAGAACCTGCGCCCCTC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGAGGGGCGCAGGTTCTaGCAGTCAGGTGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAEGRRF*QSGGIG
Trigger: GCCAATTCCACCTGACTGGCAGAACCTGCGCCCCTC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGGCTTCGGCCTCAGCTaGAGCAGCATCCAGAGCATC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSGFGLS*SSIQSI
Trigger: GATGCTCTGGATGCTGCTGCAGCTGAGGCCGAAGCC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGCTTCGGCCTCAGCTaGAGCAGCATCCAGAGCATC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAGFGLS*SSIQSI
Trigger: GATGCTCTGGATGCTGCTGCAGCTGAGGCCGAAGCC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATAGGACGTTACGCGCATaGGCAAACACTGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHRTLRA*ANTEEP
Trigger: TGGCTCTTCAGTGTTTGCGCATGCGCGTAACGTCCT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375722.5
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGAGGATCGGGATTGCTaGGCTCGGCTCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWEDRDC*ARLSAA
Trigger: GGCTGCTGAGAGCCGAGCCCAGCAATCCCGATCCTC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGAGGATCGGGATTGCTaGGCTCGGCTCTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSREDRDC*ARLSAA
Trigger: GGCTGCTGAGAGCCGAGCCCAGCAATCCCGATCCTC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCCATTTTCTGAGCCATaGCTCCTGTCCCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHPFSEP*LLSLWQ
Trigger: TTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGCAGCTGCGGTGGCCTaGTTAGTAGGTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAAAAVA*LVGGAS
Trigger: AGAGGCTCCACCTACTAACCAGGCCACCGCAGCTGC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGGGGGCTGTGAACTCTaGGGACTAGCAGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWGGCEL*GLAAAV
Trigger: CACCGCAGCTGCTAGTCCCCAGAGTTCACAGCCCCC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTGTCAGCCATCTCATTaGCAGTTGGGGGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHCQPSH*QLGAVN
Trigger: GTTCACAGCCCCCAACTGCCAATGAGATGGCTGACA...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATGTTGGGCACATCCTTaGCATTATGAGCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRCWAHP*HYEPER
Trigger: TCTCTCAGGCTCATAATGCCAAGGATGTGCCCAACA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACAGCTAACTCACCAGTaGTTGCTGCCTGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRQLTHQ*LLPGKN
Trigger: ATTTTTCCCAGGCAGCAACCACTGGTGAGTTAGCTG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTAGTAGTGGCATTCTaGGCCTTGAAGGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRLVVAF*ALKAIS
Trigger: TGAGATGGCCTTCAAGGCCCAGAATGCCACTACTAA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACTTTACATTCTGGGTCTaGGTATCAGCTGTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNFTFWV*VSAVGA
Trigger: GGCCCCAACAGCTGATACCCAGACCCAGAATGTAAA...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGGGAAGTGGCCATTTTaGCCTGATTTACATTCTGGG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRGKWPF*PDLHSG
Trigger: CCCAGAATGTAAATCAGGCCAAAATGGCCACTTCCC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATGTCAGCCTGGGAAGTaGCCATTTTGGCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRCQPGK*PFWPDL
Trigger: TAAATCAGGCCAAAATGGCCACTTCCCAGGCTGACA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGTCTGCCAGAGCACATTaGGGGGTGCGCCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSARAH*GVRQVG
Trigger: ACCCACCTGGCGCACCCCCCAATGTGCTCTGGCAGA...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGTCTGCCTGGCTGTCTaGTTTTGCCAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAVCLAV*FCQPEG
Trigger: CCCCTCAGGCTGGCAAAACCAGACAGCCAGGCAGAC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCTGGTGGGGTCTGCCTaGCTGTCTGGTTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSLVGSA*LSGFAS
Trigger: GCTGGCAAAACCAGACAGCCAGGCAGACCCCACCAG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTGGTGGGGTCTGCCTaGCTGTCTGGTTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVALVGSA*LSGFAS
Trigger: GCTGGCAAAACCAGACAGCCAGGCAGACCCCACCAG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGCTCTGACGTGCTGGTaGGGTCTGCCTGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWALTCW*GLPGCL
Trigger: CAGACAGCCAGGCAGACCCCACCAGCACGTCAGAGC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGTGGGGTCTGCCTAGCTaGAGGGCTCTGACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWWGLPS*RALTCW
Trigger: CCAGCACGTCAGAGCCCTCCAGCTAGGCAGACCCCA...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGTTCTGCCAGGCTGGTaGGGTCTGCCTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWVLPGW*GLPSWR
Trigger: CCTCCAGCTAGGCAGACCCCACCAGCCTGGCAGAAC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGTTCTGCCAGGCTGGTaGGGTCTGCCTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRVLPGW*GLPSWR
Trigger: CCTCCAGCTAGGCAGACCCCACCAGCCTGGCAGAAC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGTTCTGCCAAGCGACTaGGTTCTGCCAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSVLPSD*VLPGWW
Trigger: CCACCAGCCTGGCAGAACCCAGTCGCTTGGCAGAAC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGTTTGGCCAGATCACTaGGTTCTGCCAGATTACTGG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNVWPDH*VLPDYW
Trigger: CCAGTAATCTGGCAGAACCCAGTGATCTGGCCAAAC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCCAGACAATGGGGTTTaGCCAGATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHPDNGV*PDHWVL
Trigger: CAGAACCCAGTGATCTGGCCAAACCCCATTGTCTGG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTAAGTGGCCAATCAGGTaGCAGTGGCCAGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAKWPIR*QWPVGW
Trigger: CCACCCGACTGGCCACTGCCACCTGATTGGCCACTT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAAGTGGCCAATCAGGTaGCAGTGGCCAGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSKWPIR*QWPVGW
Trigger: CCACCCGACTGGCCACTGCCACCTGATTGGCCACTT...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAGCACCTGGGTTCTGTaGGGCACGCGAGTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSTWVL*GTRVGR
Trigger: TCTCCCAACTCGCGTGCCTCACAGAACCCAGGTGCT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCGAGGGTCTCTTTTCTaGACCTCTGCAATGAATCTC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNRGSLF*TSAMNL
Trigger: GAGATTCATTGCAGAGGTTCAGAAAAGAGACCCTCG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACTGGGGACTAGCAGCTaGGGTGGCCTGGTTAGTAGG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLGTSS*GGLVSR
Trigger: CCTACTAACCAGGCCACCGCAGCTGCTAGTCCCCAG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACAGCCTGAGGGGTTCTaGCAAGCCAATGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRQPEGF*QANGVC
Trigger: GCAGACGCCATTGGCTTGGCAGAACCCCTCAGGCTG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACGTGCTGGTGGGGTCTaGCTGGCTGTCTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRRAGGV*LAVWFC
Trigger: GCAAAACCAGACAGCCAGGCAGACCCCACCAGCACG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCAGATCACTGGGTTCTaGCAGATTACTGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHQITGF*QITGFG
Trigger: GCCAAACCCAGTAATCTGGCAGAACCCAGTGATCTG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCATCCAGGTGGATTCTaGCAGGCCAGTGGATTCGGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAHPGGF*QASGFG
Trigger: GCCGAATCCACTGGCCTGGCAGAATCCACCTGGATG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCATCCAGGTGGATTCTaGCAGGCCAGTGGATTCGGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSHPGGF*QASGFG
Trigger: GCCGAATCCACTGGCCTGGCAGAATCCACCTGGATG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCAGTCAGGAGGACCTTaGCAGTCTGGAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWQSGGP*QSGGPC
Trigger: GCAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGAGGGGCGCAGGTTCTaGCAGTCAGGTGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSREGRRF*QSGGIG
Trigger: GCCAATTCCACCTGACTGGCAGAACCTGCGCCCCTC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTTGTCCAGGAGAAAATaGCAGCGCGGCAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSLSRRK*QRGSLG
Trigger: GCCCAAGCTGCCGCGCTGGCATTTTCTCCTGGACAA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375722.5
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGCAGCTGCGGTGGCCTaGTTAGTAGGTGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRAAAVA*LVGGAS
Trigger: AGAGGCTCCACCTACTAACCAGGCCACCGCAGCTGC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTTGGGGTAGCATTTTaGGACTTAAAGGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRFGVAF*DLKAAL
Trigger: CAAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAATCATAGGCAGCATTTaGACCCTTTGGGGTAGCATT +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRIIGSI*TLWGSI
Trigger: AATGCTACCCCAAAGGGTCCAAATGCTGCCTATGAT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTGTAGGTGGCATTTaGGCCCACTTTAGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNIVGGI*AHFSSG
Trigger: GCCACTACTAAAGTGGGCCCAAATGCCACCTACAAT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTTTACATTCTGGGTCTaGGTATCAGCTGTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHFTFWV*VSAVGA
Trigger: GGCCCCAACAGCTGATACCCAGACCCAGAATGTAAA...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGTCTGCCTGGCTGTCTaGTTTTGCCAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWVCLAV*FCQPEG
Trigger: CCCCTCAGGCTGGCAAAACCAGACAGCCAGGCAGAC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGTCTGCCTGGCTGTCTaGTTTTGCCAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRVCLAV*FCQPEG
Trigger: CCCCTCAGGCTGGCAAAACCAGACAGCCAGGCAGAC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACTGGTGGGGTCTGCCTaGCTGTCTGGTTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLVGSA*LSGFAS
Trigger: GCTGGCAAAACCAGACAGCCAGGCAGACCCCACCAG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGTTCTGCCAAGCGACTaGGTTCTGCCAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWVLPSD*VLPGWW
Trigger: CCACCAGCCTGGCAGAACCCAGTCGCTTGGCAGAAC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGGCCGGGCCAGACAATaGGGTTTGGCCAGATCACTG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRGRARQ*GLARSL
Trigger: CAGTGATCTGGCCAAACCCCATTGTCTGGCCCGGCC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGGCCGGGCCAGACAATaGGGTTTGGCCAGATCACTG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWGRARQ*GLARSL
Trigger: CAGTGATCTGGCCAAACCCCATTGTCTGGCCCGGCC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTAGTCTGCCATCCAGGTaGATTCTGCCAGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVASLPSR*ILPGQW
Trigger: CCACTGGCCTGGCAGAATCCACCTGGATGGCAGACT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAAGTGGCCAATCAGGTaGCAGTGGCCAGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWKWPIR*QWPVGW
Trigger: CCACCCGACTGGCCACTGCCACCTGATTGGCCACTT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCCAGTCAGTGGGAAGTaGCCAATCAGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAPVSGK*PIRWQW
Trigger: CCACTGCCACCTGATTGGCCACTTCCCACTGACTGG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCCCAGAAGAAACCAATaGCACCAAAGTTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHPRRNQ*HQSWQR
Trigger: TCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTGGACTTTAAAGGCTaGCTTAGGCCTAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVALDFKG*LRPSGS
Trigger: GCTGCCGCTAGGCCTAAGTCAGCCTTTAAAGTCCAG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGTTTTGCCAGCCTaGGGGGTTCTGCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWLVLPA*GVLPSQ
Trigger: TTGGCTTGGCAGAACCCCTCAGGCTGGCAAAACCAG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCGAGGGTCTCTTTTCTaGACCTCTGCAATGAATCTC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHRGSLF*TSAMNL
Trigger: GAGATTCATTGCAGAGGTTCAGAAAAGAGACCCTCG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATCTGATACCAAAACTTaGCAGCACACAAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRSDTKT*QHTRGK
Trigger: TTTTCCCCTTGTGTGCTGTCAAGTTTTGGTATCAGA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCGCATGCGCAAACACTaGAGAGCCAAAGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSRMRKH*RAKVSP
Trigger: GGGACTGACTTTGGCTCTTCAGTGTTTGCGCATGCG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375722.5
CDS-3UTR GCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGTCAGAGGATCGGGATTaGTGGGCTCGGCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSEDRD*WARLSA
Trigger: TGCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGA...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTCTTGCGGGTCCTCTTaGCCCGAATTATTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVASCGSS*PELLSG
Trigger: CCCGGACAATAATTCGGGGCAAGAGGACCCGCAAGA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTCTTGCGGGTCCTCTTaGCCCGAATTATTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSSCGSS*PELLSG
Trigger: CCCGGACAATAATTCGGGGCAAGAGGACCCGCAAGA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGCCTCTGATCCCCACTaGTGTTCTCTTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHASDPH*CSLQHS
Trigger: TGAATGTTGAAGAGAACAGCAGTGGGGATCAGAGGC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGCCTCCATGAACTGTaGAGTCCAGTCACGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSSLHEL*SPVTRV
Trigger: GACCCTCGTGACTGGACTGCACAGTTCATGGAGGCT...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGGAGCCTCTGAGATCTaGATGGCCTCCATCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSGASEI*MASIKV
Trigger: GACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGAGCCTCTGAGATCTaGATGGCCTCCATCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAGASEI*MASIKV
Trigger: GACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACTTTGGGGTAGCATTTTaGGACTTAAAGGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNFGVAF*DLKAAL
Trigger: CAAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAA...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTTAGTAGTGGCATTCTaGGCCTTGAAGGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHLVVAF*ALKAIS
Trigger: TGAGATGGCCTTCAAGGCCCAGAATGCCACTACTAA...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGGGAAGTGGCCATTTTaGCCTGATTTACATTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHGKWPF*PDLHSG
Trigger: CCCAGAATGTAAATCAGGCCAAAATGGCCACTTCCC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCCAGATTACTGGGTTTaGCCAAATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHPDYWV*PNHWVL
Trigger: CAGAACCCAGTGATTTGGCCAAACCCAGTAATCTGG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTATTCTGCCAGGCCAGTaGATTCGGCCAGACAACAGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAILPGQ*IRPDNR
Trigger: CCTGTTGTCTGGCCGAATCCACTGGCCTGGCAGAAT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACCAGTCAGTGGGAAGTaGCCAATCAGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRPVSGK*PIRWQW
Trigger: CCACTGCCACCTGATTGGCCACTTCCCACTGACTGG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGTAGTGGCCAGTCAGTaGGAAGTGGCCAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSVVASQ*EVANQV
Trigger: CACCTGATTGGCCACTTCCCACTGACTGGCCACTAC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGTTCTGCCAGTCAGGTaGAATTGGCCAATCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAVLPVR*NWPISG
Trigger: CCCGCTGATTGGCCAATTCCACCTGACTGGCAGAAC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACTGGAGCGGGCATTCTaGTGGTATCTGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLERAF*WYLAQK
Trigger: CTTCTGGGCCAGATACCACCAGAATGCCCGCTCCAG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGAGCGGGCATTCTaGTGGTATCTGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWLERAF*WYLAQK
Trigger: CTTCTGGGCCAGATACCACCAGAATGCCCGCTCCAG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTAGGTCTGAGGGAATCTaGAGCGGGCATTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVARSEGI*SGHSGG
Trigger: ACCACCAGAATGCCCGCTCCAGATTCCCTCAGACCT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGGGGGTCGCACAGAGTaGGGAATGCAGAAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWGGRTE*GMQKEG
Trigger: TCCCTCTTTCTGCATTCCCCACTCTGTGCGACCCCC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000375695.2
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCCACAGTCCATTTTCTaGGCCATGGCTCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWPQSIF*AMAPVP
Trigger: AGGGACAGGAGCCATGGCTCAGAAAATGGACTGTGG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAGTAGGTGGAGCCTCTaGGATCTGGATGGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSRWSL*DLDGLH
Trigger: ATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAAGTAGGTGGAGCCTCTaGGATCTGGATGGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRSRWSL*DLDGLH
Trigger: ATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACCTAGCGGCAGCTGCTaGAACCTGAATGTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRPSGSC*NLNVSH
Trigger: ATGGCTGACATTCAGGTTTCAGCAGCTGCCGCTAGG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCCTAGCGGCAGCTGCTaGAACCTGAATGTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWPSGSC*NLNVSH
Trigger: ATGGCTGACATTCAGGTTTCAGCAGCTGCCGCTAGG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGACTTTAAAGGCTaGCTTAGGCCTAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWLDFKG*LRPSGS
Trigger: GCTGCCGCTAGGCCTAAGTCAGCCTTTAAAGTCCAG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACTGGACTTTAAAGGCTaGCTTAGGCCTAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLDFKG*LRPSGS
Trigger: GCTGCCGCTAGGCCTAAGTCAGCCTTTAAAGTCCAG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGCCTCCATCAAGGTCTaGATAAGCAAGGCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSASIKV*ISKALS
Trigger: AGACAGCGCCTTGCTTATGCAGACCTTGATGGAGGC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGCCTCCATCAAGGTCTaGATAAGCAAGGCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAASIKV*ISKALS
Trigger: AGACAGCGCCTTGCTTATGCAGACCTTGATGGAGGC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGATCTTGCGGGTCCTCTTaGCCCGAATTATTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRSCGSS*PELLSG
Trigger: CCCGGACAATAATTCGGGGCAAGAGGACCCGCAAGA...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCAAATCACTGGGTTCTaGCAAGCGACTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSQITGF*QATGFC
Trigger: GCAGAACCCAGTCGCTTGGCAGAACCCAGTGATTTG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAAGCCTCCATGAACTGTaGAGTCCAGTCACGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRSLHEL*SPVTRV
Trigger: GACCCTCGTGACTGGACTGCACAGTTCATGGAGGCT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCATCTCCAATTCCCATaGGGGTTCTTGCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSHLQFP*GFLLQP
Trigger: GGGCTGAAGCAAGAACCCGCATGGGAATTGGAGATG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGGAAGCTTTAGCTTCTaGAGCCGCTACCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRGSFSF*SRYPLL
Trigger: AAGGAGGGGGTAGCGGCTGCAGAAGCTAAAGCTTCC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTGGCGTGACCGGAAGTaGTGTCCTCTTTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSWRDRK*CPLLFG
Trigger: GCCAAACAAAAGAGGACAGCACTTCCGGTCACGCCA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCCATTTTCTGAGCCATaGCTCCTGTCCCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSPFSEP*LLSLWQ
Trigger: TTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCCTCTGAGATCTGGATaGCCTCCATCAAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSPLRSG*PPSRSA
Trigger: TGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGGAGCCTCTGAGATCTaGATGGCCTCCATCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRGASEI*MASIKV
Trigger: GACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTGTCAGCCATCTCATTaGCAGTTGGGGGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVACQPSH*QLGAVN
Trigger: GTTCACAGCCCCCAACTGCCAATGAGATGGCTGACA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTGTCAGCCATCTCATTaGCAGTTGGGGGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSCQPSH*QLGAVN
Trigger: GTTCACAGCCCCCAACTGCCAATGAGATGGCTGACA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCCTTGGGCTGCGTGTTaGGCACATCCTTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSPWAAC*AHPWHY
Trigger: ATAATGCCAAGGATGTGCCCAACACGCAGCCCAAGG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGTTCTGAGTGGTCACTaGAACTGGTGCAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAVLSGH*NWCRPP
Trigger: TGGAGGTCTGCACCAGTTCCAGTGACCACTCAGAAC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGTTCTGAGTGGTCACTaGAACTGGTGCAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSVLSGH*NWCRPP
Trigger: TGGAGGTCTGCACCAGTTCCAGTGACCACTCAGAAC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGTAGTGGCCAGTCAGTaGGAAGTGGCCAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRVVASQ*EVANQV
Trigger: CACCTGATTGGCCACTTCCCACTGACTGGCCACTAC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGTTCTGCCAGTCAGGTaGAATTGGCCAATCAGCGGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWVLPVR*NWPISG
Trigger: CCCGCTGATTGGCCAATTCCACCTGACTGGCAGAAC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTAGAGGAGACCGAGCTTaGGTGTGTCTTTGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVARGDRA*VCLWSF
Trigger: GAACGACCAAAGACACACCCAAGCTCGGTCTCCTCT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGAGCGGGCATTCTGGTaGTATCTGGCCCAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRERAFW*YLAQKV
Trigger: TACCTTCTGGGCCAGATACCACCAGAATGCCCGCTC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAAGGTCTGAGGGAATCTaGAGCGGGCATTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRRSEGI*SGHSGG
Trigger: ACCACCAGAATGCCCGCTCCAGATTCCCTCAGACCT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAGGTCTGAGGGAATCTaGAGCGGGCATTCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWRSEGI*SGHSGG
Trigger: ACCACCAGAATGCCCGCTCCAGATTCCCTCAGACCT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACAGCGAAGTTGGCACTaGCTGTACCACCAGGACCAA +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRQRSWH*LYHQDQ
Trigger: TTGGTCCTGGTGGTACAGCCAGTGCCAACTTCGCTG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCAGCGAAGTTGGCACTaGCTGTACCACCAGGACCAA +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWQRSWH*LYHQDQ
Trigger: TTGGTCCTGGTGGTACAGCCAGTGCCAACTTCGCTG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAGTTGGCAGCGAAGTTaGCACTGGCTGTACCACCAG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSWQRS*HWLYHQ
Trigger: CTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAAGTTGGCAGCGAAGTTaGCACTGGCTGTACCACCAG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRSWQRS*HWLYHQ
Trigger: CTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCAATGGCACCAAAGTTaGCAGCGAAGTTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAQWHQS*QRSWHW
Trigger: CCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGCAGCTGCTGAAACCTaGATGTCAGCCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSAAAET*MSAISL
Trigger: CAATGAGATGGCTGACATTCAGGTTTCAGCAGCTGC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGATGGCATTCTGGGCCTTaGAGGCCATCTCAGACTTGT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRWHSGP*RPSQTC
Trigger: ACAAGTCTGAGATGGCCTTCAAGGCCCAGAATGCCA...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGTGGCCATTTTGGCCTaGTTTACATTCTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSVAILA*FTFWVW
Trigger: CCAGACCCAGAATGTAAATCAGGCCAAAATGGCCAC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCAGTGTATTCACGGATaGTATCTCTCAGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHQCIHG*YLSAFL
Trigger: CAGAAATGCTGAGAGATATCATCCGTGAATACACTG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACAGCATGCACGTTCAATaGTTTCTGGATAAACATCAG +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNSMHVQ*FLDKHQ
Trigger: CTGATGTTTATCCAGAAATCATTGAACGTGCATGCT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTCTGAACCTCTGCAATaGATCTCAGCACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHSEPLQ*ISALSS
Trigger: AGATGAAAGTGCTGAGATTCATTGCAGAGGTTCAGA...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGCCTCCATCAAGGTCTaGATAAGCAAGGCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRASIKV*ISKALS
Trigger: AGACAGCGCCTTGCTTATGCAGACCTTGATGGAGGC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACAAATCACTGGGTTCTaGCAAGCGACTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRQITGF*QATGFC
Trigger: GCAGAACCCAGTCGCTTGGCAGAACCCAGTGATTTG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCAGATCACTGGGTTCTaGCAGATTACTGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAQITGF*QITGFG
Trigger: GCCAAACCCAGTAATCTGGCAGAACCCAGTGATCTG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCAGATCACTGGGTTCTaGCAGATTACTGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSQITGF*QITGFG
Trigger: GCCAAACCCAGTAATCTGGCAGAACCCAGTGATCTG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATCTTTTCTGAACCTCTaGAATGAATCTCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRSFLNL*NESQHF
Trigger: AAAGTGCTGAGATTCATTGCAGAGGTTCAGAAAAGA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCCATTTTCTGAGCCATaGCTCCTGTCCCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWPFSEP*LLSLWQ
Trigger: TTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACCTCTGAGATCTGGATaGCCTCCATCAAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRPLRSG*PPSRSA
Trigger: TGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGATGTCAGCCATCTCATTaGCAGTTGGGGGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRCQPSH*QLGAVN
Trigger: GTTCACAGCCCCCAACTGCCAATGAGATGGCTGACA...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCCTTGGGCTGCGTGTTaGGCACATCCTTGGCATTAT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWPWAAC*AHPWHY
Trigger: ATAATGCCAAGGATGTGCCCAACACGCAGCCCAAGG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTTTACATTCTGGGTCTaGGTATCAGCTGTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSFTFWV*VSAVGA
Trigger: GGCCCCAACAGCTGATACCCAGACCCAGAATGTAAA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTTTACATTCTGGGTCTaGGTATCAGCTGTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAFTFWV*VSAVGA
Trigger: GGCCCCAACAGCTGATACCCAGACCCAGAATGTAAA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGTTCTGCCAAGCCAATaGCGTCTGCCAGAGCACATT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRVLPSQ*RLPEHI
Trigger: AATGTGCTCTGGCAGACGCCATTGGCTTGGCAGAAC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGTTCTGCCAAGCCAATaGCGTCTGCCAGAGCACATT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWVLPSQ*RLPEHI
Trigger: AATGTGCTCTGGCAGACGCCATTGGCTTGGCAGAAC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGTTTGGCCAAATCACTaGGTTCTGCCAAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRVWPNH*VLPSDW
Trigger: CCAGTCGCTTGGCAGAACCCAGTGATTTGGCCAAAC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGTTTGGCCAAATCACTaGGTTCTGCCAAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWVWPNH*VLPSDW
Trigger: CCAGTCGCTTGGCAGAACCCAGTGATTTGGCCAAAC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCCAGACAATGGGGTTTaGCCAGATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWPDNGV*PDHWVL
Trigger: CAGAACCCAGTGATCTGGCCAAACCCCATTGTCTGG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACCAGACAATGGGGTTTaGCCAGATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRPDNGV*PDHWVL
Trigger: CAGAACCCAGTGATCTGGCCAAACCCCATTGTCTGG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAAGAGGAGACCGAGCTTaGGTGTGTCTTTGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRRGDRA*VCLWSF
Trigger: GAACGACCAAAGACACACCCAAGCTCGGTCTCCTCT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGCCCAGAAGGTAAATaGAATTCTGGACCAGGGATC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAGPEGK*NSGPGI
Trigger: GATCCCTGGTCCAGAATTCCATTTACCTTCTGGGCC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGGCCCAGAAGGTAAATaGAATTCTGGACCAGGGATC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSGPEGK*NSGPGI
Trigger: GATCCCTGGTCCAGAATTCCATTTACCTTCTGGGCC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCAATGGCACCAAAGTTaGCAGCGAAGTTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWQWHQS*QRSWHW
Trigger: CCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACAATGGCACCAAAGTTaGCAGCGAAGTTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRQWHQS*QRSWHW
Trigger: CCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGCAGCTGCTGAAACCTaGATGTCAGCCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRAAAET*MSAISL
Trigger: CAATGAGATGGCTGACATTCAGGTTTCAGCAGCTGC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTTATTTGCTCTTTCCTaGAGAAGGGCCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVALFALS*RRATSR
Trigger: CCGAGATGTGGCCCTTCTTCAGGAAAGAGCAAATAA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTTATTTGCTCTTTCCTaGAGAAGGGCCACATCTCGG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSLFALS*RRATSR
Trigger: CCGAGATGTGGCCCTTCTTCAGGAAAGAGCAAATAA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATAGCATGCACGTTCAATaGTTTCTGGATAAACATCAG +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHSMHVQ*FLDKHQ
Trigger: CTGATGTTTATCCAGAAATCATTGAACGTGCATGCT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACTCACCAGTGGTTGCTaGCTGGGAAAAATCATAGGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLTSGC*LGKIIG
Trigger: GCCTATGATTTTTCCCAGGCAGCAACCACTGGTGAG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCACCAGTGGTTGCTaGCTGGGAAAAATCATAGGC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWLTSGC*LGKIIG
Trigger: GCCTATGATTTTTCCCAGGCAGCAACCACTGGTGAG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGCCTCTGATCCCCACTaGTGTTCTCTTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSASDPH*CSLQHS
Trigger: TGAATGTTGAAGAGAACAGCAGTGGGGATCAGAGGC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCAGATCACTGGGTTCTaGCAGATTACTGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWQITGF*QITGFG
Trigger: GCCAAACCCAGTAATCTGGCAGAACCCAGTGATCTG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACTCTTTTCTGAACCTCTaGAATGAATCTCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: RLQPHTGERLLRLIAISNSFLNL*NESQHF
Trigger: AAAGTGCTGAGATTCATTGCAGAGGTTCAGAAAAGA...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTGTTGGGCACATCCTTaGCATTATGAGCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSCWAHP*HYEPER
Trigger: TCTCTCAGGCTCATAATGCCAAGGATGTGCCCAACA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTTAGTAGTGGCATTCTaGGCCTTGAAGGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSLVVAF*ALKAIS
Trigger: TGAGATGGCCTTCAAGGCCCAGAATGCCACTACTAA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTATTGTAGGTGGCATTTaGGCCCACTTTAGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSIVGGI*AHFSSG
Trigger: GCCACTACTAAAGTGGGCCCAAATGCCACCTACAAT...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTGGGTATCAGCTGTTaGGGCCTTAGTGGTATCATT +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVALGISC*GLSGII
Trigger: AATGATACCACTAAGGCCCCAACAGCTGATACCCAG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCTGGGTATCAGCTGTTaGGGCCTTAGTGGTATCATT +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSLGISC*GLSGII
Trigger: AATGATACCACTAAGGCCCCAACAGCTGATACCCAG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTGTCAGCCTGGGAAGTaGCCATTTTGGCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVACQPGK*PFWPDL
Trigger: TAAATCAGGCCAAAATGGCCACTTCCCAGGCTGACA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAAGGTTCAGAGATACCTaGGTCGGTCTCTATGTCAGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRRFRDT*VGLYVS
Trigger: GCTGACATAGAGACCGACCCAGGTATCTCTGAACCT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGTTTGGCCAGATCACTaGGTTCTGCCAGATTACTGG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRVWPDH*VLPDYW
Trigger: CCAGTAATCTGGCAGAACCCAGTGATCTGGCCAAAC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGTTTGGCCAGATCACTaGGTTCTGCCAGATTACTGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWVWPDH*VLPDYW
Trigger: CCAGTAATCTGGCAGAACCCAGTGATCTGGCCAAAC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGGCCCAGAAGGTAAATaGAATTCTGGACCAGGGATC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWGPEGK*NSGPGI
Trigger: GATCCCTGGTCCAGAATTCCATTTACCTTCTGGGCC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCCCAGAAGAAACCAATaGCACCAAAGTTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWPRRNQ*HQSWQR
Trigger: TCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTTACAAACTCATAGGTaGGAAGTTTCCTTAGATCTC +
Preference number: 4 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHLQTHR*EVSLDL
Trigger: GAGATCTAAGGAAACTTCTCACCTATGAGTTTGTAA...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACGAGGGTCTCTTTTCTaGACCTCTGCAATGAATCTC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRRGSLF*TSAMNL
Trigger: GAGATTCATTGCAGAGGTTCAGAAAAGAGACCCTCG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGTGTTGGGCACATCCTTaGCATTATGAGCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWCWAHP*HYEPER
Trigger: TCTCTCAGGCTCATAATGCCAAGGATGTGCCCAACA...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTTTGGGGTAGCATTTTaGGACTTAAAGGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSFGVAF*DLKAAL
Trigger: CAAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTAGCATTTGGACCCTTTaGGGTAGCATTTTGGGACTT +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVASIWTL*GSILGL
Trigger: AAGTCCCAAAATGCTACCCCAAAGGGTCCAAATGCT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTATCATAGGCAGCATTTaGACCCTTTGGGGTAGCATT +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVAIIGSI*TLWGSI
Trigger: AATGCTACCCCAAAGGGTCCAAATGCTGCCTATGAT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACAGCTAACTCACCAGTaGTTGCTGCCTGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRQLTHQ*LLPGKN
Trigger: ATTTTTCCCAGGCAGCAACCACTGGTGAGTTAGCTG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCAGCTAACTCACCAGTaGTTGCTGCCTGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWQLTHQ*LLPGKN
Trigger: ATTTTTCCCAGGCAGCAACCACTGGTGAGTTAGCTG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGATTAGTAGTGGCATTCTaGGCCTTGAAGGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLVVAF*ALKAIS
Trigger: TGAGATGGCCTTCAAGGCCCAGAATGCCACTACTAA...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAATTGTAGGTGGCATTTaGGCCCACTTTAGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRIVGGI*AHFSSG
Trigger: GCCACTACTAAAGTGGGCCCAAATGCCACCTACAAT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGATTGTAGGTGGCATTTaGGCCCACTTTAGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWIVGGI*AHFSSG
Trigger: GCCACTACTAAAGTGGGCCCAAATGCCACCTACAAT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGGGTATCAGCTGTTaGGGCCTTAGTGGTATCATT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWLGISC*GLSGII
Trigger: AATGATACCACTAAGGCCCCAACAGCTGATACCCAG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGGGAAGTGGCCATTTTaGCCTGATTTACATTCTGGG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWGKWPF*PDLHSG
Trigger: CCCAGAATGTAAATCAGGCCAAAATGGCCACTTCCC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGATGTCAGCCTGGGAAGTaGCCATTTTGGCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRCQPGK*PFWPDL
Trigger: TAAATCAGGCCAAAATGGCCACTTCCCAGGCTGACA...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACCAGATTACTGGGTTTaGCCAAATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRPDYWV*PNHWVL
Trigger: CAGAACCCAGTGATTTGGCCAAACCCAGTAATCTGG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTCTGAACCTCTGCAATaGATCTCAGCACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVASEPLQ*ISALSS
Trigger: AGATGAAAGTGCTGAGATTCATTGCAGAGGTTCAGA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTCTGATACCAAAACTTaGCAGCACACAAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSSDTKT*QHTRGK
Trigger: TTTTCCCCTTGTGTGCTGTCAAGTTTTGGTATCAGA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTCTGATACCAAAACTTaGCAGCACACAAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVASDTKT*QHTRGK
Trigger: TTTTCCCCTTGTGTGCTGTCAAGTTTTGGTATCAGA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTTGACCAACTTATTTaGTCTTTCCTGAAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVALDQLI*SFLKKG
Trigger: GCCCTTCTTCAGGAAAGAGCAAATAAGTTGGTCAAG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTATCATAGACACCATTTaGGCCTTTTGTGGTGGCATT +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSIIDTI*AFCGGI
Trigger: AATGCCACCACAAAAGGCCCAAATGGTGTCTATGAT...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGTTTGGGGTAGCATTTTaGGACTTAAAGGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWFGVAF*DLKAAL
Trigger: CAAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAA...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAAGCATTTGGACCCTTTaGGGTAGCATTTTGGGACTT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRSIWTL*GSILGL
Trigger: AAGTCCCAAAATGCTACCCCAAAGGGTCCAAATGCT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAGCATTTGGACCCTTTaGGGTAGCATTTTGGGACTT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSIWTL*GSILGL
Trigger: AAGTCCCAAAATGCTACCCCAAAGGGTCCAAATGCT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGATCATAGGCAGCATTTaGACCCTTTGGGGTAGCATT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWIIGSI*TLWGSI
Trigger: AATGCTACCCCAAAGGGTCCAAATGCTGCCTATGAT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCAGTGTATTCACGGATaGTATCTCTCAGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWQCIHG*YLSAFL
Trigger: CAGAAATGCTGAGAGATATCATCCGTGAATACACTG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGCATGCACGTTCAATaGTTTCTGGATAAACATCAG +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSSMHVQ*FLDKHQ
Trigger: CTGATGTTTATCCAGAAATCATTGAACGTGCATGCT...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGTCTGAACCTCTGCAATaGATCTCAGCACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSEPLQ*ISALSS
Trigger: AGATGAAAGTGCTGAGATTCATTGCAGAGGTTCAGA...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACTTGACCAACTTATTTaGTCTTTCCTGAAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLDQLI*SFLKKG
Trigger: GCCCTTCTTCAGGAAAGAGCAAATAAGTTGGTCAAG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTGACCAACTTATTTaGTCTTTCCTGAAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWLDQLI*SFLKKG
Trigger: GCCCTTCTTCAGGAAAGAGCAAATAAGTTGGTCAAG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAATCATAGACACCATTTaGGCCTTTTGTGGTGGCATT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRIIDTI*AFCGGI
Trigger: AATGCCACCACAAAAGGCCCAAATGGTGTCTATGAT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CCA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGATCATAGACACCATTTaGGCCTTTTGTGGTGGCATT +
Preference number: 4 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWIIDTI*AFCGGI
Trigger: AATGCCACCACAAAAGGCCCAAATGGTGTCTATGAT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTTACAAACTCATAGGTaGGAAGTTTCCTTAGATCTC +
Preference number: 4 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSLQTHR*EVSLDL
Trigger: GAGATCTAAGGAAACTTCTCACCTATGAGTTTGTAA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTTACAAACTCATAGGTaGGAAGTTTCCTTAGATCTC +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVALQTHR*EVSLDL
Trigger: GAGATCTAAGGAAACTTCTCACCTATGAGTTTGTAA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTCTTTTCTGAACCTCTaGAATGAATCTCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: GTANKFILHATFSQQDVASFLNL*NESQHF
Trigger: AAAGTGCTGAGATTCATTGCAGAGGTTCAGAAAAGA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR TCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGATTACAAACTCATAGGTaGGAAGTTTCCTTAGATCTC +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLQTHR*EVSLDL
Trigger: GAGATCTAAGGAAACTTCTCACCTATGAGTTTGTAA...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR GCA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGATCTTTTCTGAACCTCTaGAATGAATCTCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRSFLNL*NESQHF
Trigger: AAAGTGCTGAGATTCATTGCAGAGGTTCAGAAAAGA...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS TCA 90 bp GCCTCAGCCTGGAAGCCGAGGAGGCCCGCACCACAGTCCATTTTCTaGGCCATGGCTCCTGTCCCTCTGGCAAGAGCGGAGCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: ASAWKPRRPAPQSIF*AMAPVPLARAEPGG
Trigger: GCCCCCAGGCTCCGCTCTTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGGACTGTGGTGCGGGCCTCCTCGGCTTCCAGGCTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375772.7
ENST00000494718.5
CDS GCA 90 bp GGAGGACCTTGCCAGTCTGGAGGACCCTGCCAGCCCGGTGGGGTCTaGCATCCAGGTGGAGTCTGCCATCCAGGTGGATTCTGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GGPCQSGGPCQPGGV*HPGGVCHPGGFCQA
Trigger: GGCCTGGCAGAATCCACCTGGATGGCAGACTCCACCTGGATGGCAGACCCCACCGGGCTGGCAGGGTCCTCCAGACTGGCAAGGTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS GCA 90 bp GGTGGTAGCGGCCAGTCAGGAGGACCTTGCCAGTCTGGAGGACCCTaGCAGCCCGGTGGGGTCTGCCATCCAGGTGGAGTCTGCCATCCA +
Preference number: 5 (lower is better)
Translates to: GGSGQSGGPCQSGGP*QPGGVCHPGGVCHP
Trigger: TGGATGGCAGACTCCACCTGGATGGCAGACCCCACCGGGCTGGCAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTGGCCGCTACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS TCA 90 bp CTGAAGAAGGGCCACATCTCGGGGCTGTGCAGCACCTGGGTTCTGTaGGGCACGCGAGTTGGGAGAAGGGCGCAGGTTAGGCGAGGGGCG +
Preference number: 5 (lower is better)
Translates to: LKKGHISGLCSTWVL*GTRVGRRAQVRRGA
Trigger: CGCCCCTCGCCTAACCTGCGCCCTTCTCCCAACTCGCGTGCCTCACAGAACCCAGGTGCTGCACAGCCCCGAGATGTGGCCCTTCTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS CCA 90 bp CCTGGAAGCCGAGGAGGCCCGCACCACAGTCCATTTTCTGAGCCATaGCTCCTGTCCCTCTGGCAAGAGCGGAGCCTGGGGGCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: PGSRGGPHHSPFSEP*LLSLWQERSLGACL
Trigger: GAGGCAAGCCCCCAGGCTCCGCTCTTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGGACTGTGGTGCGGGCCTCCTCGGCTTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326587.12
ENST00000494718.5
CDS TCA 90 bp GCCTCAGCCTGGAAGCCGAGGAGGCCCGCACCACAGTCCATTTTCTaGGCCATGGCTCCTGTCCCTCTGGCAAGAGCGGAGCCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: ASAWKPRRPAPQSIF*AMAPVPLARAEPCL
Trigger: GAGGCAAGGCTCCGCTCTTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGGACTGTGGTGCGGGCCTCCTCGGCTTCCAGGCTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375722.5
ENST00000485420.5
CDS GCA 90 bp GGTGGGGTCTGCCATCCAGGTGGAGTCTGCCATCCAGGTGGATTCTaGCAGGCCAGTGGATTCGGCCAGACAACAGGGCCGGGCCAGACA +
Preference number: 5 (lower is better)
Translates to: GGVCHPGGVCHPGGF*QASGFGQTTGPGQT
Trigger: TGTCTGGCCCGGCCCTGTTGTCTGGCCGAATCCACTGGCCTGGCAGAATCCACCTGGATGGCAGACTCCACCTGGATGGCAGACCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS GCA 90 bp CTTCTACGGAGGCCTCAGCAGGAGCCGGGGACGCTCCAAGAGGCGTaGAGTAGCAGCTCAGGACGGCAGGCGGATCGCGGAGTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: LLRRPQQEPGTLQEA*SSSSGRQADRGVEN
Trigger: ATTCTCAACTCCGCGATCCGCCTGCCGTCCTGAGCTGCTACTGCACGCCTCTTGGAGCGTCCCCGGCTCCTGCTGAGGCCTCCGTAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375695.2
CDS CCA 90 bp CCAGTCAGGAGGACCTTGCCAGTCTGGAGGACCCTGCCAGCCCGGTaGGGTCTGCCATCCAGGTGGAGTCTGCCATCCAGGTGGATTCTG +
Preference number: 5 (lower is better)
Translates to: PVRRTLPVWRTLPAR*GLPSRWSLPSRWIL
Trigger: CAGAATCCACCTGGATGGCAGACTCCACCTGGATGGCAGACCCCACCGGGCTGGCAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS CCA 90 bp TCTGGAAGCCGAGGAGGCCCGCACCACAGTCCATTTTCTGAGCCATaGCTCCTGTCCCTCTGGCAAGAGCGGAGCCTGGGGGCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: SGSRGGPHHSPFSEP*LLSLWQERSLGACL
Trigger: GAGGCAAGCCCCCAGGCTCCGCTCTTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGGACTGTGGTGCGGGCCTCCTCGGCTTCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375695.2
CDS TCA 90 bp TCAGGATTCTGGAAGCCGAGGAGGCCCGCACCACAGTCCATTTTCTaGGCCATGGCTCCTGTCCCTCTGGCAAGAGCGGAGCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: SGFWKPRRPAPQSIF*AMAPVPLARAEPGG
Trigger: GCCCCCAGGCTCCGCTCTTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGGACTGTGGTGCGGGCCTCCTCGGCTTCCAGAATCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375695.2
CDS GCA 90 bp AACCCCCTCGCTGCCTCCCTTCTTCACGACTCAGAGGATCGGGATTaGTGGGCTCGGCTCTCAGCAGCCGCACTCTCTCCTTGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: NPLAASLLHDSEDRD*WARLSAAALSPCPG
Trigger: TCCTGGACAAGGAGAGAGTGCGGCTGCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGAGTCGTGAAGAAGGGAGGCAGCGAGGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS GCA 90 bp TGGGTTCTGAGTGGTCACTGGAACTGGTGCAGACCTCCAGGTCCCTaGAGCCAGTGGGGCCCGCCTCTGATCCCCACTGCTGTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: WVLSGHWNWCRPPGP*SQWGPPLIPTAVLF
Trigger: GAAGAGAACAGCAGTGGGGATCAGAGGCGGGCCCCACTGGCTGCAGGGACCTGGAGGTCTGCACCAGTTCCAGTGACCACTCAGAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS CCA 90 bp AGCCTGAGGGGTTCTGCCAAGCCAATGGCGTCTGCCAGAGCACATTaGGGGGTGCGCCAGGTGGGTTCTGAGTGGTCACTGGAACTGGTG +
Preference number: 5 (lower is better)
Translates to: SLRGSAKPMASARAH*GVRQVGSEWSLELV
Trigger: CACCAGTTCCAGTGACCACTCAGAACCCACCTGGCGCACCCCCCAATGTGCTCTGGCAGACGCCATTGGCTTGGCAGAACCCCTCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS CCA 90 bp CCATCCAGGTGGAGTCTGCCATCCAGGTGGATTCTGCCAGGCCAGTaGATTCGGCCAGACAACAGGGCCGGGCCAGACAATGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: PSRWSLPSRWILPGQ*IRPDNRAGPDNGVW
Trigger: CCAAACCCCATTGTCTGGCCCGGCCCTGTTGTCTGGCCGAATCCACTGGCCTGGCAGAATCCACCTGGATGGCAGACTCCACCTGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS GCA 90 bp AATTCCCATGCGGGTTCTTGCTTCAGCCCGGGCTTCGGCCTCAGCTaGAGCAGCATCCAGAGCATCCAAGGCCTCATCTGCAGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: NSHAGSCFSPGFGLS*SSIQSIQGLICSLH
Trigger: ATGGAGGCTGCAGATGAGGCCTTGGATGCTCTGGATGCTGCTGCAGCTGAGGCCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 90 bp GCAGTTGGGGGCTGTGAACTCTGGGGACTAGCAGCTGCGGTGGCCTaGTTAGTAGGTGGAGCCTCTGAGATCTGGATGGCCTCCATCAAG +
Preference number: 5 (lower is better)
Translates to: AVGGCELWGLAAAVA*LVGGASEIWMASIK
Trigger: CTTGATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACTAACCAGGCCACCGCAGCTGCTAGTCCCCAGAGTTCACAGCCCCCAACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS TCA 90 bp CTGGGGACTAGCAGCTGCGGTGGCCTGGTTAGTAGGTGGAGCCTCTaGGATCTGGATGGCCTCCATCAAGGTCTGCATAAGCAAGGCGCT +
Preference number: 5 (lower is better)
Translates to: LGTSSCGGLVSRWSL*DLDGLHQGLHKQGA
Trigger: AGCGCCTTGCTTATGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACTAACCAGGCCACCGCAGCTGCTAGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 90 bp AGTGGTCACTGGAACTGGTGCAGACCTCCAGGTCCCTGCAGCCAGTaGGGCCCGCCTCTGATCCCCACTGCTGTTCTCTTCAACATTCAA +
Preference number: 5 (lower is better)
Translates to: SGHWNWCRPPGPCSQ*GPPLIPTAVLFNIQ
Trigger: TTGAATGTTGAAGAGAACAGCAGTGGGGATCAGAGGCGGGCCCCACTGGCTGCAGGGACCTGGAGGTCTGCACCAGTTCCAGTGACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS TCA 90 bp GCACTGGCTGTACCACCAGGACCAATAATGGGACCGGCAAAGGTCTaGGGGAATCTGGAGCGGGCATTCTGGTGGTATCTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ALAVPPGPIMGPAKV*GNLERAFWWYLAQK
Trigger: CTTCTGGGCCAGATACCACCAGAATGCCCGCTCCAGATTCCCTCAGACCTTTGCCGGTCCCATTATTGGTCCTGGTGGTACAGCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS GCA 90 bp TTAGTAGGTGGAGCCTCTGAGATCTGGATGGCCTCCATCAAGGTCTaGATAAGCAAGGCGCTGTCTTCTACGGAGGCCTCAGCCCACCCC +
Preference number: 5 (lower is better)
Translates to: LVGGASEIWMASIKV*ISKALSSTEASAHP
Trigger: GGGGTGGGCTGAGGCCTCCGTAGAAGACAGCGCCTTGCTTATGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482188.1
CDS GCA 90 bp TTAGTAGGTGGAGCCTCTGAGATCTGGATGGCCTCCATCAAGGTCTaGATAAGCAAGGCGCTGTCTTCTACGGAGGCCTCAGCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LVGGASEIWMASIKV*ISKALSSTEASAGA
Trigger: GGCTCCTGCTGAGGCCTCCGTAGAAGACAGCGCCTTGCTTATGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACTAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375695.2
CDS CCA 90 bp CTAGCAGCTGCGGTGGCCTGGTTAGTAGGTGGAGCCTCTGAGATCTaGATGGCCTCCATCAAGGTCTGCATAAGCAAGGCGCTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LAAAVAWLVGGASEI*MASIKVCISKALSS
Trigger: AGAAGACAGCGCCTTGCTTATGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACTAACCAGGCCACCGCAGCTGCTAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS TCA 90 bp CTGCAGCAGCATCCAGAGCATCCAAGGCCTCATCTGCAGCCTCCATaGACTGTGCAGTCCAGTCACGAGGGTCTCTTTTCTGAACCTCTG +
Preference number: 5 (lower is better)
Translates to: LQQHPEHPRPHLQPP*TVQSSHEGLFSEPL
Trigger: CAGAGGTTCAGAAAAGAGACCCTCGTGACTGGACTGCACAGTTCATGGAGGCTGCAGATGAGGCCTTGGATGCTCTGGATGCTGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS GCA 90 bp TTAGTAGGTGGAGCCTCTGAGATCTGGATGGCCTCCATCAAGGTCTaGATAAGCAAGGCGCTGTCTTCTACGGAGGCCTCAGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LVGGASEIWMASIKV*ISKALSSTEASAWK
Trigger: CTTCCAGGCTGAGGCCTCCGTAGAAGACAGCGCCTTGCTTATGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACTAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326587.12
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS GCA 90 bp TTAGTAGGTGGAGCCTCTGAGATCTGGATGGCCTCCATCAAGGTCTaGATAAGCAAGGCGCTGTCTTCTACGGAGGCCTCAGCCTTGCCT +
Preference number: 5 (lower is better)
Translates to: LVGGASEIWMASIKV*ISKALSSTEASALP
Trigger: AGGCAAGGCTGAGGCCTCCGTAGAAGACAGCGCCTTGCTTATGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACTAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470461.1
CDS TCA 90 bp CCTGGGTCGGTCTCTATGTCAGCCTGGGAAGTGGCCATTTTGGCCTaGTTTACATTCTGGGTCTGGGTATCAGCTGTTGGGGCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: PGSVSMSAWEVAILA*FTFWVWVSAVGALV
Trigger: CACTAAGGCCCCAACAGCTGATACCCAGACCCAGAATGTAAATCAGGCCAAAATGGCCACTTCCCAGGCTGACATAGAGACCGACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS GCA 90 bp GGCAGCATTTGGACCCTTTGGGGTAGCATTTTGGGACTTAAAGGCTaGCTTGGGCTGCGTGTTGGGCACATCCTTGGCATTATGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GSIWTLWGSILGLKG*LGLRVGHILGIMSL
Trigger: CAGGCTCATAATGCCAAGGATGTGCCCAACACGCAGCCCAAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAAGGGTCCAAATGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS GCA 90 bp TTCTCCTCTTCCTATGTCCACCACTGGTTCTGCCTGTACCACCCTTaGGGGTCCTCTTGCCCCGAATTATTGTCCGGGACTCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: FSSSYVHHWFCLYHP*GSSCPELLSGTPDS
Trigger: AGAATCTGGAGTCCCGGACAATAATTCGGGGCAAGAGGACCCGCAAGGGTGGTACAGGCAGAACCAGTGGTGGACATAGGAAGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482599.1
CDS-3UTR CAA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATGTGAGGCACGCGAGTaGGGAGAAGGGCGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRCEARE*GEGRRL
Trigger: TAACCTGCGCCCTTCTCCCAACTCGCGTGCCTCACA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS TCA 90 bp TGGACTTTAAAGGCTGACTTAGGCCTAGCGGCAGCTGCTGAAACCTaGATGTCAGCCATCTCATTGGCAGTTGGGGGCTGTGAACTCTGG +
Preference number: 5 (lower is better)
Translates to: WTLKADLGLAAAAET*MSAISLAVGGCELW
Trigger: CCAGAGTTCACAGCCCCCAACTGCCAATGAGATGGCTGACATTCAGGTTTCAGCAGCTGCCGCTAGGCCTAAGTCAGCCTTTAAAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 90 bp AGATACCTGGGTCGGTCTCTATGTCAGCCTGGGAAGTGGCCATTTTaGCCTGATTTACATTCTGGGTCTGGGTATCAGCTGTTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: RYLGRSLCQPGKWPF*PDLHSGSGYQLLGP
Trigger: AGGCCCCAACAGCTGATACCCAGACCCAGAATGTAAATCAGGCCAAAATGGCCACTTCCCAGGCTGACATAGAGACCGACCCAGGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS-3UTR CAA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGCCTTGGGCTGCGTGTaGGGCACATCCTTGGCATTA +
Preference number: 5 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRALGCV*GTSLAL
Trigger: TAATGCCAAGGATGTGCCCAACACGCAGCCCAAGGC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCCAGTCAGGAGGACCTaGCCAGTCTGGAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHPVRRT*PVWRTL
Trigger: CAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTGG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGCCAGTCAGGTGGAATaGGCCAATCAGCGGGGATCC +
Preference number: 5 (lower is better)
Translates to: RLQPHTGERLLRLIAISNASQVE*ANQRGS
Trigger: GGATCCCCGCTGATTGGCCAATTCCACCTGACTGGC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACTGTGAGGCACGCGAGTaGGGAGAAGGGCGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: RLQPHTGERLLRLIAISNCEARE*GEGRRL
Trigger: TAACCTGCGCCCTTCTCCCAACTCGCGTGCCTCACA...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS TCA 90 bp AATTATTGTCCGGGACTCCAGATTCTGAGCCTGGGAACCATCTGCTaGTGTCTGTGCAGTTGCACCGTCAGGTTCAGAGATACCTGGGTC +
Preference number: 5 (lower is better)
Translates to: NYCPGLQILSLGTIC*CLCSCTVRFRDTWV
Trigger: GACCCAGGTATCTCTGAACCTGACGGTGCAACTGCACAGACATCAGCAGATGGTTCCCAGGCTCAGAATCTGGAGTCCCGGACAATAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 90 bp GAAATGAGTACAATGCAGTGCAAAAGTGTCAGCCTGGCCCAGCCTTaGGAATGTCTACTGTGGGGATGGTGGATGGGCTTCACTTGCAAG +
Preference number: 5 (lower is better)
Translates to: EMSTMQCKSVSLAQP*ECLLWGWWMGFTCK
Trigger: CTTGCAAGTGAAGCCCATCCACCATCCCCACAGTAGACATTCCCAAGGCTGGGCCAGGCTGACACTTTTGCACTGCATTGTACTCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494718.5
CDS-3UTR CAA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAGTCTTAGGCCTGCTGTaGGCCAGGTCATTGGCATTG +
Preference number: 5 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRVLGLL*ARSLAL
Trigger: CAATGCCAATGACCTGGCCAACAGCAGGCCTAAGAC...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGCCAGTCAGGTGGAATaGGCCAATCAGCGGGGATCC +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHASQVE*ANQRGS
Trigger: GGATCCCCGCTGATTGGCCAATTCCACCTGACTGGC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACCAATGGCACCAAAGTaGGCAGCGAAGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRPMAPK*AAKLAL
Trigger: CAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGGCAAGAGCGGAGCCTaGCCTCAGGCCCCAACCCCA +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSGKSGA*PQAPTP
Trigger: TGGGGTTGGGGCCTGAGGCAAGGCTCCGCTCTTGCC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375722.5
CDS GCA 90 bp CTTGTCAGTGAGCCACAGAGGTCCATTGAAATGAGTACAATGCAGTaGAAAAGTGTCAGCCTGGCCCAGCCTTGGGAATGTCTACTGTGG +
Preference number: 5 (lower is better)
Translates to: LVSEPQRSIEMSTMQ*KSVSLAQPWECLLW
Trigger: CCACAGTAGACATTCCCAAGGCTGGGCCAGGCTGACACTTTTGCACTGCATTGTACTCATTTCAATGGACCTCTGTGGCTCACTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494718.5
CDS CCA 90 bp AGTGGTTGCTGCCTGGGAAAAATCATAGGCAGCATTTGGACCCTTTaGGGTAGCATTTTGGGACTTAAAGGCTGCCTTGGGCTGCGTGTT +
Preference number: 5 (lower is better)
Translates to: SGCCLGKIIGSIWTL*GSILGLKGCLGLRV
Trigger: AACACGCAGCCCAAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAAGGGTCCAAATGCTGCCTATGATTTTTCCCAGGCAGCAACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 90 bp AGTGATGTACCTACCCAACATCTCACTCAACCCAGAAGAAACCAATaGCACCAAAGTTGGCAGCGAAGTTGGCACTGGCTGTACCACCAG +
Preference number: 5 (lower is better)
Translates to: SDVPTQHLTQPRRNQ*HQSWQRSWHWLYHQ
Trigger: CTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGGTTGAGTGAGATGTTGGGTAGGTACATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473931.1
ENST00000494718.5
CDS-3UTR CAA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACAGCCGCACTCTCTCCTaGTCCAGGAGAAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: RLQPHTGERLLRLIAISNSRTLS*SRRKCQ
Trigger: CTGGCATTTTCTCCTGGACAAGGAGAGAGTGCGGCT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326587.12
ENST00000375722.5
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGACTTAAAGGCTGCCTaGGGCTGCGTGTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHDLKAA*GCVLGT
Trigger: TGTGCCCAACACGCAGCCCAAGGCAGCCTTTAAGTC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACGTCTTAGGCCTGCTGTaGGCCAGGTCATTGGCATTG +
Preference number: 5 (lower is better)
Translates to: RLQPHTGERLLRLIAISNVLGLL*ARSLAL
Trigger: CAATGCCAATGACCTGGCCAACAGCAGGCCTAAGAC...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACTGATGTCTGTGCAGTaGCACCGTCAGGTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRLMSVQ*HRQVQR
Trigger: TCTCTGAACCTGACGGTGCAACTGCACAGACATCAG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACAAGTTGGCAGCGAAGTaGGCACTGGCTGTACCACCA +
Preference number: 5 (lower is better)
Translates to: RLQPHTGERLLRLIAISNKLAAK*ALAVPP
Trigger: TGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACTT...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCCAATGGCACCAAAGTaGGCAGCGAAGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: RLQPHTGERLLRLIAISNPMAPK*AAKLAL
Trigger: CAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCAGAGGATCGGGATaGCTGGGCTCGGCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVALRGSG*LGSALS
Trigger: GCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGAG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR CAA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATCTTGCCCCGAATTATaGTCCGGGACTCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRSCPEL*SGTPDS
Trigger: AGAATCTGGAGTCCCGGACAATAATTCGGGGCAAGA...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATATCTTGCGGGTCCTCTaGCCCCGAATTATTGTCCGG +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHILRVL*PRIIVR
Trigger: CCGGACAATAATTCGGGGCAAGAGGACCCGCAAGAT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCCAGTCAGGAGGACCTaGCCAGTCTGGAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSPVRRT*PVWRTL
Trigger: CAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTGG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCCAGTCAGGAGGACCTaGCCAGTCTGGAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAPVRRT*PVWRTL
Trigger: CAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTGG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTTCCCATGCGGGTTCTaGCTTCAGCCCGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAFPCGF*LQPGLR
Trigger: CCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGAA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTTCCCATGCGGGTTCTaGCTTCAGCCCGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSFPCGF*LQPGLR
Trigger: CCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGAA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGCGGAGCCTGGGGGCTaGACGAAGAAGGCAGCAACG +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRAEPGG*TKKAAT
Trigger: CGTTGCTGCCTTCTTCGTCAAGCCCCCAGGCTCCGC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS TCA 90 bp CAGATTCTTGTAATCTTGTCAGTGAGCCACAGAGGTCCATTGAAATaGGTACAATGCAGTGCAAAAGTGTCAGCCTGGCCCAGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: QILVILSVSHRGPLK*VQCSAKVSAWPSLG
Trigger: CCCAAGGCTGGGCCAGGCTGACACTTTTGCACTGCATTGTACTCATTTCAATGGACCTCTGTGGCTCACTGACAAGATTACAAGAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494718.5
CDS GCA 90 bp CATAAATACAACCCCATGGACCCTATATCCCCCAGAGACCCTAACTaGCCAATCCAAAGTGATGTACCTACCCAACATCTCACTCAACCC +
Preference number: 5 (lower is better)
Translates to: HKYNPMDPISPRDPN*PIQSDVPTQHLTQP
Trigger: GGGTTGAGTGAGATGTTGGGTAGGTACATCACTTTGGATTGGGCAGTTAGGGTCTCTGGGGGATATAGGGTCCATGGGGTTGTATTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473931.1
ENST00000494718.5
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCAGAGGATCGGGATaGCTGGGCTCGGCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWLRGSG*LGSALS
Trigger: GCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGAG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACTCAGAGGATCGGGATaGCTGGGCTCGGCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLRGSG*LGSALS
Trigger: GCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGAG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
CDS-3UTR CAA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGACTTTGGGGTAGCATTTaGGGACTTAAAGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRLWGSI*GLKGCL
Trigger: AAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAAG...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAAAGGCCATCTCAGACTaGTTAGCAGCTAACTCACCA +
Preference number: 5 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRKAISD*LAANSP
Trigger: TGGTGAGTTAGCTGCTAACAAGTCTGAGATGGCCTT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCTGATGTCTGTGCAGTaGCACCGTCAGGTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHLMSVQ*HRQVQR
Trigger: TCTCTGAACCTGACGGTGCAACTGCACAGACATCAG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACCAGTCAGGAGGACCTaGCCAGTCTGGAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRPVRRT*PVWRTL
Trigger: CAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTGG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGTTCCCATGCGGGTTCTaGCTTCAGCCCGGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWFPCGF*LQPGLR
Trigger: CCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGAA...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCCATCTCATTGGCAGTaGGGGGCTGTGAACTCTGGG +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSPSHWQ*GAVNSG
Trigger: CCCAGAGTTCACAGCCCCCAACTGCCAATGAGATGG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCCATCTCATTGGCAGTaGGGGGCTGTGAACTCTGGG +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAPSHWQ*GAVNSG
Trigger: CCCAGAGTTCACAGCCCCCAACTGCCAATGAGATGG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GTGTTTAGAAGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGAAATCATAGACACCATTaGGGCCTTTTGTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: VFRRNLRLQPHTGERLLRNHRHH*GLLWWH
Trigger: ATGCCACCACAAAAGGCCCAAATGGTGTCTATGATT...TCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCTTCTAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGCCTTGGGCTGCGTGTaGGGCACATCCTTGGCATTA +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAALGCV*GTSLAL
Trigger: TAATGCCAAGGATGTGCCCAACACGCAGCCCAAGGC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGCCTTGGGCTGCGTGTaGGGCACATCCTTGGCATTA +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSALGCV*GTSLAL
Trigger: TAATGCCAAGGATGTGCCCAACACGCAGCCCAAGGC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACCTTTGGGGTAGCATTTaGGGACTTAAAGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: RLQPHTGERLLRLIAISNLWGSI*GLKGCL
Trigger: AAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAAG...GTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATGTATCATTCCAAGCCTaGAAAGGGGTCTTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHVSFQA*KGVLGL
Trigger: CAGGCCTAAGACCCCTTTCAAGGCTTGGAATGATAC...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATTCTTGCCCCGAATTATaGTCCGGGACTCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHSCPEL*SGTPDS
Trigger: AGAATCTGGAGTCCCGGACAATAATTCGGGGCAAGA...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGCCAGTCAGGTGGAATaGGCCAATCAGCGGGGATCC +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRASQVE*ANQRGS
Trigger: GGATCCCCGCTGATTGGCCAATTCCACCTGACTGGC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGATGTGAGGCACGCGAGTaGGGAGAAGGGCGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRCEARE*GEGRRL
Trigger: TAACCTGCGCCCTTCTCCCAACTCGCGTGCCTCACA...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCCATCTCATTGGCAGTaGGGGGCTGTGAACTCTGGG +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWPSHWQ*GAVNSG
Trigger: CCCAGAGTTCACAGCCCCCAACTGCCAATGAGATGG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACCATCTCATTGGCAGTaGGGGGCTGTGAACTCTGGG +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRPSHWQ*GAVNSG
Trigger: CCCAGAGTTCACAGCCCCCAACTGCCAATGAGATGG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGCCTTGGGCTGCGTGTaGGGCACATCCTTGGCATTA +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRALGCV*GTSLAL
Trigger: TAATGCCAAGGATGTGCCCAACACGCAGCCCAAGGC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGACTTAAAGGCTGCCTaGGGCTGCGTGTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRDLKAA*GCVLGT
Trigger: TGTGCCCAACACGCAGCCCAAGGCAGCCTTTAAGTC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGACTTAAAGGCTGCCTaGGGCTGCGTGTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWDLKAA*GCVLGT
Trigger: TGTGCCCAACACGCAGCCCAAGGCAGCCTTTAAGTC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATCTAACTCACCAGTGGTaGCTGCCTGGGAAAAATCAT +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHLTHQW*LPGKNH
Trigger: ATGATTTTTCCCAGGCAGCAACCACTGGTGAGTTAG...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATAAGGCCATCTCAGACTaGTTAGCAGCTAACTCACCA +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHKAISD*LAANSP
Trigger: TGGTGAGTTAGCTGCTAACAAGTCTGAGATGGCCTT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGTGGCATTCTGGGCCTaGAAGGCCATCTCAGACTTG +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSVAFWA*KAISDL
Trigger: CAAGTCTGAGATGGCCTTCAAGGCCCAGAATGCCAC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGTGGCATTCTGGGCCTaGAAGGCCATCTCAGACTTG +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAVAFWA*KAISDL
Trigger: CAAGTCTGAGATGGCCTTCAAGGCCCAGAATGCCAC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTATCTTGCGGGTCCTCTaGCCCCGAATTATTGTCCGG +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAILRVL*PRIIVR
Trigger: CCGGACAATAATTCGGGGCAAGAGGACCCGCAAGAT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCCAATGGCACCAAAGTaGGCAGCGAAGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSPMAPK*AAKLAL
Trigger: CAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAGCCGCACTCTCTCCTaGTCCAGGAGAAAATGCCAG +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSRTLS*SRRKCQ
Trigger: CTGGCATTTTCTCCTGGACAAGGAGAGAGTGCGGCT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326587.12
ENST00000375722.5
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTATGTCAGCCATCTCATaGGCAGTTGGGGGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSMSAIS*AVGGCE
Trigger: TTCACAGCCCCCAACTGCCAATGAGATGGCTGACAT...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTATGTCAGCCATCTCATaGGCAGTTGGGGGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAMSAIS*AVGGCE
Trigger: TTCACAGCCCCCAACTGCCAATGAGATGGCTGACAT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GCTTCAGCCTCACACAGGGGAAAGACTACTGCGATTGATAGCAATATCCAACATAATCATAGACACCATTaGGGCCTTTTGTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: ASASHRGKTTAIDSNIQHNHRHH*GLLWWH
Trigger: ATGCCACCACAAAAGGCCCAAATGGTGTCTATGATT...ATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAGTGGCATTCTGGGCCTaGAAGGCCATCTCAGACTTG +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRVAFWA*KAISDL
Trigger: CAAGTCTGAGATGGCCTTCAAGGCCCAGAATGCCAC...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTGATGTCTGTGCAGTaGCACCGTCAGGTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVALMSVQ*HRQVQR
Trigger: TCTCTGAACCTGACGGTGCAACTGCACAGACATCAG...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGATCTTGCGGGTCCTCTaGCCCCGAATTATTGTCCGG +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWILRVL*PRIIVR
Trigger: CCGGACAATAATTCGGGGCAAGAGGACCCGCAAGAT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAAGTTGGCAGCGAAGTaGGCACTGGCTGTACCACCA +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWKLAAK*ALAVPP
Trigger: TGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACTT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCCAATGGCACCAAAGTaGGCAGCGAAGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWPMAPK*AAKLAL
Trigger: CAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAATGTCAGCCATCTCATaGGCAGTTGGGGGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRMSAIS*AVGGCE
Trigger: TTCACAGCCCCCAACTGCCAATGAGATGGCTGACAT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTGTATCATTCCAAGCCTaGAAAGGGGTCTTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAVSFQA*KGVLGL
Trigger: CAGGCCTAAGACCCCTTTCAAGGCTTGGAATGATAC...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGTATCATTCCAAGCCTaGAAAGGGGTCTTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSVSFQA*KGVLGL
Trigger: CAGGCCTAAGACCCCTTTCAAGGCTTGGAATGATAC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGACTGATGTCTGTGCAGTaGCACCGTCAGGTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRLMSVQ*HRQVQR
Trigger: TCTCTGAACCTGACGGTGCAACTGCACAGACATCAG...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTCTTGCCCCGAATTATaGTCCGGGACTCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVASCPEL*SGTPDS
Trigger: AGAATCTGGAGTCCCGGACAATAATTCGGGGCAAGA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTCTTTGGGGTAGCATTTaGGGACTTAAAGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSLWGSI*GLKGCL
Trigger: AAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAAG...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTAAGGCCATCTCAGACTaGTTAGCAGCTAACTCACCA +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAKAISD*LAANSP
Trigger: TGGTGAGTTAGCTGCTAACAAGTCTGAGATGGCCTT...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGGTATCATTCCAAGCCTaGAAAGGGGTCTTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWVSFQA*KGVLGL
Trigger: CAGGCCTAAGACCCCTTTCAAGGCTTGGAATGATAC...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGTCTTGCCCCGAATTATaGTCCGGGACTCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWSCPEL*SGTPDS
Trigger: AGAATCTGGAGTCCCGGACAATAATTCGGGGCAAGA...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp GGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTTCAAGTTATTAATCTaGCGGGTCCTCTTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: GTANKFILHATFSQQDVAFKLLI*RVLLPR
Trigger: TCGGGGCAAGAGGACCCGCAAGATTAATAACTTGAA...AGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTTTCAAGTTATTAATCTaGCGGGTCCTCTTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSFKLLI*RVLLPR
Trigger: TCGGGGCAAGAGGACCCGCAAGATTAATAACTTGAA...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTGCTGTCCTCTTTTGTTaGGCGGAAGCTTTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: QQINLSCMPLSVNRMWLSAVLFC*AEALAS
Trigger: AGAAGCTAAAGCTTCCGCCAAACAAAAGAGGACAGC...AGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTTTGGGGTAGCATTTaGGGACTTAAAGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWLWGSI*GLKGCL
Trigger: AAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAAG...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp CAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGCTCTCTAGAAAGGCCATCTCAGACTaGTTAGCAGCTAACTCACCA +
Preference number: 5 (lower is better)
Translates to: QINLSCMPLSVNRMWLSRKAISD*LAANSP
Trigger: TGGTGAGTTAGCTGCTAACAAGTCTGAGATGGCCTT...TCTAGAGAGCCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAAGTGCTGTCCTCTTTaGTTTGGCGGAAGCTTTAGC +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWKCCPL*FGGSFS
Trigger: GCTAAAGCTTCCGCCAAACAAAAGAGGACAGCACTT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS-3UTR CAA 90 bp AAGGAACAGCAAATAAATTTATCTTGCATGCCACTTTCAGTCAACAGGATGTGGAATCATAGACACCATTaGGGCCTTTTGTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: KEQQINLSCMPLSVNRMWNHRHH*GLLWWH
Trigger: ATGCCACCACAAAAGGCCCAAATGGTGTCTATGATT...CCACATCCTGTTGACTGAAAGTGGCATGCAAGATAAATTTATTTGCTGTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
CDS GCA 72 bp AGGCCTCAGCAGGAGCCGGGGACGCTCCAAGAGGCGTaGAGTAGCAGCTCAGGACGGCAGGCGGATCGCGGA +
Preference number: 6 (lower is better)
Translates to: RPQQEPGTLQEA*SSSSGRQADRG
Trigger: TCCGCGATCCGCCTGCCGTCCTGAGCTGCTACTGCACGCCTCTTGGAGCGTCCCCGGCTCCTGCTGAGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375695.2
CDS GCA 72 bp GGCCAGTCAGGAGGACCTTGCCAGTCTGGAGGACCCTaGCAGCCCGGTGGGGTCTGCCATCCAGGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: GQSGGPCQSGGP*QPGGVCHPGGV
Trigger: GACTCCACCTGGATGGCAGACCCCACCGGGCTGGCAGGGTCCTCCAGACTGGCAAGGTCCTCCTGACTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS TCA 72 bp GGCCACATCTCGGGGCTGTGCAGCACCTGGGTTCTGTaGGGCACGCGAGTTGGGAGAAGGGCGCAGGTTAGG +
Preference number: 6 (lower is better)
Translates to: GHISGLCSTWVL*GTRVGRRAQVR
Trigger: CCTAACCTGCGCCCTTCTCCCAACTCGCGTGCCTCACAGAACCCAGGTGCTGCACAGCCCCGAGATGTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS GCA 72 bp AGTGGTCACTGGAACTGGTGCAGACCTCCAGGTCCCTaGAGCCAGTGGGGCCCGCCTCTGATCCCCACTGCT +
Preference number: 6 (lower is better)
Translates to: SGHWNWCRPPGP*SQWGPPLIPTA
Trigger: AGCAGTGGGGATCAGAGGCGGGCCCCACTGGCTGCAGGGACCTGGAGGTCTGCACCAGTTCCAGTGACCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp CGAGGAGGCCCGCACCACAGTCCATTTTCTGAGCCATaGCTCCTGTCCCTCTGGCAAGAGCGGAGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: RGGPHHSPFSEP*LLSLWQERSLG
Trigger: CCCCAGGCTCCGCTCTTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGGACTGTGGTGCGGGCCTCCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375772.7
ENST00000494718.5
CDS GCA 72 bp GCGGGTTCTTGCTTCAGCCCGGGCTTCGGCCTCAGCTaGAGCAGCATCCAGAGCATCCAAGGCCTCATCTGC +
Preference number: 6 (lower is better)
Translates to: AGSCFSPGFGLS*SSIQSIQGLIC
Trigger: GCAGATGAGGCCTTGGATGCTCTGGATGCTGCTGCAGCTGAGGCCGAAGCCCGGGCTGAAGCAAGAACCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp TGGAACTGGTGCAGACCTCCAGGTCCCTGCAGCCAGTaGGGCCCGCCTCTGATCCCCACTGCTGTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: WNWCRPPGPCSQ*GPPLIPTAVLF
Trigger: GAAGAGAACAGCAGTGGGGATCAGAGGCGGGCCCCACTGGCTGCAGGGACCTGGAGGTCTGCACCAGTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS CAA 72 bp CGCTGCCTCCCTTCTTCACGACTCAGAGGATCGGGATaGCTGGGCTCGGCTCTCAGCAGCCGCACTCTCTCC +
Preference number: 6 (lower is better)
Translates to: RCLPSSRLRGSG*LGSALSSRTLS
Trigger: GGAGAGAGTGCGGCTGCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGAGTCGTGAAGAAGGGAGGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000470461.1
ENST00000494718.5
CDS CAA 90 bp CAACCCCCTCGCTGCCTCCCTTCTTCACGACTCAGAGGATCGGGATaGCTGGGCTCGGCTCTCAGCAGCCGCACTCTCTCCTTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QPPRCLPSSRLRGSG*LGSALSSRTLSLSR
Trigger: CCTGGACAAGGAGAGAGTGCGGCTGCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGAGTCGTGAAGAAGGGAGGCAGCGAGGGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000470461.1
CDS TCA 72 bp TGGAAGCCGAGGAGGCCCGCACCACAGTCCATTTTCTaGGCCATGGCTCCTGTCCCTCTGGCAAGAGCGGAG +
Preference number: 6 (lower is better)
Translates to: WKPRRPAPQSIF*AMAPVPLARAE
Trigger: CTCCGCTCTTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGGACTGTGGTGCGGGCCTCCTCGGCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS GCA 72 bp GCTGCCTCCCTTCTTCACGACTCAGAGGATCGGGATTaGTGGGCTCGGCTCTCAGCAGCCGCACTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: AASLLHDSEDRD*WARLSAAALSP
Trigger: AGGAGAGAGTGCGGCTGCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGAGTCGTGAAGAAGGGAGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000470461.1
ENST00000494718.5
CDS GCA 72 bp TGCCATCCAGGTGGAGTCTGCCATCCAGGTGGATTCTaGCAGGCCAGTGGATTCGGCCAGACAACAGGGCCG +
Preference number: 6 (lower is better)
Translates to: CHPGGVCHPGGF*QASGFGQTTGP
Trigger: CGGCCCTGTTGTCTGGCCGAATCCACTGGCCTGGCAGAATCCACCTGGATGGCAGACTCCACCTGGATGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp GGTTCTGCCAAGCCAATGGCGTCTGCCAGAGCACATTaGGGGGTGCGCCAGGTGGGTTCTGAGTGGTCACTG +
Preference number: 6 (lower is better)
Translates to: GSAKPMASARAH*GVRQVGSEWSL
Trigger: CAGTGACCACTCAGAACCCACCTGGCGCACCCCCCAATGTGCTCTGGCAGACGCCATTGGCTTGGCAGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp CAGGTTAGGCGAGGGGCGCAGGTTCTGCCAGTCAGGTaGAATTGGCCAATCAGCGGGGATCCAGTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: QVRRGAQVLPVR*NWPISGDPVRW
Trigger: CCACCTGACTGGATCCCCGCTGATTGGCCAATTCCACCTGACTGGCAGAACCTGCGCCCCTCGCCTAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS GCA 72 bp TGCCTGGCTGTCTGGTTTTGCCAGCCTGAGGGGTTCTaGCAAGCCAATGGCGTCTGCCAGAGCACATTGGGG +
Preference number: 6 (lower is better)
Translates to: CLAVWFCQPEGF*QANGVCQSTLG
Trigger: CCCCAATGTGCTCTGGCAGACGCCATTGGCTTGGCAGAACCCCTCAGGCTGGCAAAACCAGACAGCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS GCA 72 bp AGACACAGCCTCATCTCCAATTCCCATGCGGGTTCTTaGTTCAGCCCGGGCTTCGGCCTCAGCTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RHSLISNSHAGS*FSPGFGLSCSS
Trigger: GCTGCTGCAGCTGAGGCCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGAATTGGAGATGAGGCTGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp GCCTCCCTTCTTCACGACTCAGAGGATCGGGATTGCTaGGCTCGGCTCTCAGCAGCCGCACTCTCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: ASLLHDSEDRDC*ARLSAAALSPC
Trigger: ACAAGGAGAGAGTGCGGCTGCTGAGAGCCGAGCCCAGCAATCCCGATCCTCTGAGTCGTGAAGAAGGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000470461.1
ENST00000494718.5
CDS CCA 72 bp GGCTGTGAACTCTGGGGACTAGCAGCTGCGGTGGCCTaGTTAGTAGGTGGAGCCTCTGAGATCTGGATGGCC +
Preference number: 6 (lower is better)
Translates to: GCELWGLAAAVA*LVGGASEIWMA
Trigger: GGCCATCCAGATCTCAGAGGCTCCACCTACTAACCAGGCCACCGCAGCTGCTAGTCCCCAGAGTTCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp TGGAGTCTGCCATCCAGGTGGATTCTGCCAGGCCAGTaGATTCGGCCAGACAACAGGGCCGGGCCAGACAAT +
Preference number: 6 (lower is better)
Translates to: WSLPSRWILPGQ*IRPDNRAGPDN
Trigger: ATTGTCTGGCCCGGCCCTGTTGTCTGGCCGAATCCACTGGCCTGGCAGAATCCACCTGGATGGCAGACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
ENST00000494718.5
CDS CAA 72 bp CAGACACAGCCTCATCTCCAATTCCCATGCGGGTTCTaGCTTCAGCCCGGGCTTCGGCCTCAGCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: QTQPHLQFPCGF*LQPGLRPQLQQ
Trigger: CTGCTGCAGCTGAGGCCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGAATTGGAGATGAGGCTGTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS TCA 72 bp CTGAATGTCAGCCATCTCATTGGCAGTTGGGGGCTGTaGACTCTGGGGACTAGCAGCTGCGGTGGCCTGGTT +
Preference number: 6 (lower is better)
Translates to: LNVSHLIGSWGL*TLGTSSCGGLV
Trigger: AACCAGGCCACCGCAGCTGCTAGTCCCCAGAGTTCACAGCCCCCAACTGCCAATGAGATGGCTGACATTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS TCA 72 bp CCTGGGGGCTTGACGAAGAAGGCAGCAACGATGGCGTaGCCGGAAGTGCTGTCCTCTTTTGTTTGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: PGGLTKKAATMA*PEVLSSFVWRK
Trigger: CTTCCGCCAAACAAAAGAGGACAGCACTTCCGGTCACGCCATCGTTGCTGCCTTCTTCGTCAAGCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS CCA 72 bp GCGGTGGCCTGGTTAGTAGGTGGAGCCTCTGAGATCTaGATGGCCTCCATCAAGGTCTGCATAAGCAAGGCG +
Preference number: 6 (lower is better)
Translates to: AVAWLVGGASEI*MASIKVCISKA
Trigger: CGCCTTGCTTATGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACTAACCAGGCCACCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 90 bp GAAGGCAGCAACGATGGCGTGACCGGAAGTGCTGTCCTCTTTTGTTaGGCGGAAGCTTTAGCTTCTGCAGCCGCTACCCCCTCCTTCACT +
Preference number: 6 (lower is better)
Translates to: EGSNDGVTGSAVLFC*AEALASAAATPSFT
Trigger: AGTGAAGGAGGGGGTAGCGGCTGCAGAAGCTAAAGCTTCCGCCAAACAAAAGAGGACAGCACTTCCGGTCACGCCATCGTTGCTGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS CAA 90 bp CGAAGAAGGCAGCAACGATGGCGTGACCGGAAGTGCTGTCCTCTTTaGTTTGGCGGAAGCTTTAGCTTCTGCAGCCGCTACCCCCTCCTT +
Preference number: 6 (lower is better)
Translates to: RRRQQRWRDRKCCPL*FGGSFSFCSRYPLL
Trigger: AAGGAGGGGGTAGCGGCTGCAGAAGCTAAAGCTTCCGCCAAACAAAAGAGGACAGCACTTCCGGTCACGCCATCGTTGCTGCCTTCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS CAA 90 bp TGGTTCTGCCTGTACCACCCTTGCGGGTCCTCTTGCCCCGAATTATaGTCCGGGACTCCAGATTCTGAGCCTGGGAACCATCTGCTGATG +
Preference number: 6 (lower is better)
Translates to: WFCLYHPCGSSCPEL*SGTPDSEPGNHLLM
Trigger: CATCAGCAGATGGTTCCCAGGCTCAGAATCTGGAGTCCCGGACAATAATTCGGGGCAAGAGGACCCGCAAGGGTGGTACAGGCAGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482599.1
CDS TCA 72 bp AGCAGCTGCGGTGGCCTGGTTAGTAGGTGGAGCCTCTaGGATCTGGATGGCCTCCATCAAGGTCTGCATAAG +
Preference number: 6 (lower is better)
Translates to: SSCGGLVSRWSL*DLDGLHQGLHK
Trigger: CTTATGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCCACCTACTAACCAGGCCACCGCAGCTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS GCA 72 bp GGAGCCTCTGAGATCTGGATGGCCTCCATCAAGGTCTaGATAAGCAAGGCGCTGTCTTCTACGGAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: GASEIWMASIKV*ISKALSSTEAS
Trigger: TGAGGCCTCCGTAGAAGACAGCGCCTTGCTTATGCAGACCTTGATGGAGGCCATCCAGATCTCAGAGGCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS GCA 72 bp TCCTATGTCCACCACTGGTTCTGCCTGTACCACCCTTaGGGGTCCTCTTGCCCCGAATTATTGTCCGGGACT +
Preference number: 6 (lower is better)
Translates to: SYVHHWFCLYHP*GSSCPELLSGT
Trigger: AGTCCCGGACAATAATTCGGGGCAAGAGGACCCGCAAGGGTGGTACAGGCAGAACCAGTGGTGGACATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482599.1
CDS CAA 72 bp AACGATGGCGTGACCGGAAGTGCTGTCCTCTTTTGTTaGGCGGAAGCTTTAGCTTCTGCAGCCGCTACCCCC +
Preference number: 6 (lower is better)
Translates to: NDGVTGSAVLFC*AEALASAAATP
Trigger: GGGGGTAGCGGCTGCAGAAGCTAAAGCTTCCGCCAAACAAAAGAGGACAGCACTTCCGGTCACGCCATCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS CAA 72 bp CTGTACCACCCTTGCGGGTCCTCTTGCCCCGAATTATaGTCCGGGACTCCAGATTCTGAGCCTGGGAACCAT +
Preference number: 6 (lower is better)
Translates to: LYHPCGSSCPEL*SGTPDSEPGNH
Trigger: ATGGTTCCCAGGCTCAGAATCTGGAGTCCCGGACAATAATTCGGGGCAAGAGGACCCGCAAGGGTGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482599.1
CDS CAA 72 bp TTCCTATGTCCACCACTGGTTCTGCCTGTACCACCCTaGCGGGTCCTCTTGCCCCGAATTATTGTCCGGGAC +
Preference number: 6 (lower is better)
Translates to: FLCPPLVLPVPP*RVLLPRIIVRD
Trigger: GTCCCGGACAATAATTCGGGGCAAGAGGACCCGCAAGGGTGGTACAGGCAGAACCAGTGGTGGACATAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482599.1
CDS CAA 90 bp CTTCTCCTCTTCCTATGTCCACCACTGGTTCTGCCTGTACCACCCTaGCGGGTCCTCTTGCCCCGAATTATTGTCCGGGACTCCAGATTC +
Preference number: 6 (lower is better)
Translates to: LLLFLCPPLVLPVPP*RVLLPRIIVRDSRF
Trigger: GAATCTGGAGTCCCGGACAATAATTCGGGGCAAGAGGACCCGCAAGGGTGGTACAGGCAGAACCAGTGGTGGACATAGGAAGAGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482599.1
CDS TCA 72 bp GTACCACCAGGACCAATAATGGGACCGGCAAAGGTCTaGGGGAATCTGGAGCGGGCATTCTGGTGGTATCTG +
Preference number: 6 (lower is better)
Translates to: VPPGPIMGPAKV*GNLERAFWWYL
Trigger: CAGATACCACCAGAATGCCCGCTCCAGATTCCCTCAGACCTTTGCCGGTCCCATTATTGGTCCTGGTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp TGTCTGTGCAGTTGCACCGTCAGGTTCAGAGATACCTaGGTCGGTCTCTATGTCAGCCTGGGAAGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: CLCSCTVRFRDT*VGLYVSLGSGH
Trigger: ATGGCCACTTCCCAGGCTGACATAGAGACCGACCCAGGTATCTCTGAACCTGACGGTGCAACTGCACAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp AGTGTCAGCCTGGCCCAGCCTTGGGAATGTCTACTGTaGGGATGGTGGATGGGCTTCACTTGCAAGACAACT +
Preference number: 6 (lower is better)
Translates to: SVSLAQPWECLL*GWWMGFTCKTT
Trigger: AGTTGTCTTGCAAGTGAAGCCCATCCACCATCCCCACAGTAGACATTCCCAAGGCTGGGCCAGGCTGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494718.5
CDS CAA 72 bp TCTGAGCCTGGGAACCATCTGCTGATGTCTGTGCAGTaGCACCGTCAGGTTCAGAGATACCTGGGTCGGTCT +
Preference number: 6 (lower is better)
Translates to: SEPGNHLLMSVQ*HRQVQRYLGRS
Trigger: AGACCGACCCAGGTATCTCTGAACCTGACGGTGCAACTGCACAGACATCAGCAGATGGTTCCCAGGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 72 bp CAGCAACGATGGCGTGACCGGAAGTGCTGTCCTCTTTaGTTTGGCGGAAGCTTTAGCTTCTGCAGCCGCTAC +
Preference number: 6 (lower is better)
Translates to: QQRWRDRKCCPL*FGGSFSFCSRY
Trigger: GTAGCGGCTGCAGAAGCTAAAGCTTCCGCCAAACAAAAGAGGACAGCACTTCCGGTCACGCCATCGTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS CCA 72 bp CTCACTCAACCCAGAAGAAACCAATGGCACCAAAGTTaGCAGCGAAGTTGGCACTGGCTGTACCACCAGGAC +
Preference number: 6 (lower is better)
Translates to: LTQPRRNQWHQS*QRSWHWLYHQD
Trigger: GTCCTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGGTTGAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 72 bp GTAGTGGCATTCTGGGCCTTGAAGGCCATCTCAGACTaGTTAGCAGCTAACTCACCAGTGGTTGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: VVAFWALKAISD*LAANSPVVAAW
Trigger: CCAGGCAGCAACCACTGGTGAGTTAGCTGCTAACAAGTCTGAGATGGCCTTCAAGGCCCAGAATGCCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 72 bp TCAGCTGTTGGGGCCTTAGTGGTATCATTCCAAGCCTaGAAAGGGGTCTTAGGCCTGCTGTTGGCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: SAVGALVVSFQA*KGVLGLLLARS
Trigger: TGACCTGGCCAACAGCAGGCCTAAGACCCCTTTCAAGGCTTGGAATGATACCACTAAGGCCCCAACAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 90 bp GTCTGGGTATCAGCTGTTGGGGCCTTAGTGGTATCATTCCAAGCCTaGAAAGGGGTCTTAGGCCTGCTGTTGGCCAGGTCATTGGCATTG +
Preference number: 6 (lower is better)
Translates to: VWVSAVGALVVSFQA*KGVLGLLLARSLAL
Trigger: CAATGCCAATGACCTGGCCAACAGCAGGCCTAAGACCCCTTTCAAGGCTTGGAATGATACCACTAAGGCCCCAACAGCTGATACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 90 bp ACTCCAGATTCTGAGCCTGGGAACCATCTGCTGATGTCTGTGCAGTaGCACCGTCAGGTTCAGAGATACCTGGGTCGGTCTCTATGTCAG +
Preference number: 6 (lower is better)
Translates to: TPDSEPGNHLLMSVQ*HRQVQRYLGRSLCQ
Trigger: CTGACATAGAGACCGACCCAGGTATCTCTGAACCTGACGGTGCAACTGCACAGACATCAGCAGATGGTTCCCAGGCTCAGAATCTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 90 bp CACTCAACCCAGAAGAAACCAATGGCACCAAAGTTGGCAGCGAAGTaGGCACTGGCTGTACCACCAGGACCAATAATGGGACCGGCAAAG +
Preference number: 6 (lower is better)
Translates to: HSTQKKPMAPKLAAK*ALAVPPGPIMGPAK
Trigger: CTTTGCCGGTCCCATTATTGGTCCTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGGTTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS GCA 72 bp TGCTGTCCTCTTTTGTTTGGCGGAAGCTTTAGCTTCTaGAGCCGCTACCCCCTCCTTCACTTCAGGCAACTT +
Preference number: 6 (lower is better)
Translates to: CCPLLFGGSFSF*SRYPLLHFRQL
Trigger: AAGTTGCCTGAAGTGAAGGAGGGGGTAGCGGCTGCAGAAGCTAAAGCTTCCGCCAAACAAAAGAGGACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375772.7
CDS GCA 72 bp TTCAGTAGCCATTTGCATGAGAGACCCCAACCAGCTTaGCCATCTAGCCTCCCCAATATTCCTCAGCTAGGG +
Preference number: 6 (lower is better)
Translates to: FSSHLHERPQPA*PSSLPNIPQLG
Trigger: CCCTAGCTGAGGAATATTGGGGAGGCTAGATGGGCAAGCTGGTTGGGGTCTCTCATGCAAATGGCTACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp GGTCGGTCTCTATGTCAGCCTGGGAAGTGGCCATTTTaGCCTGATTTACATTCTGGGTCTGGGTATCAGCTG +
Preference number: 6 (lower is better)
Translates to: GRSLCQPGKWPF*PDLHSGSGYQL
Trigger: CAGCTGATACCCAGACCCAGAATGTAAATCAGGCCAAAATGGCCACTTCCCAGGCTGACATAGAGACCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CCA 72 bp CCTACCCAACATCTCACTCAACCCAGAAGAAACCAATaGCACCAAAGTTGGCAGCGAAGTTGGCACTGGCTG +
Preference number: 6 (lower is better)
Translates to: PTQHLTQPRRNQ*HQSWQRSWHWL
Trigger: CAGCCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGGTTGAGTGAGATGTTGGGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473931.1
ENST00000494718.5
CDS CCA 72 bp TCAGAACTGTTTCCCCATCCACCCAGGTCACATCTTTaGGCTCTGAACATCCCCAAACCAAACCCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: SELFPHPPRSHL*ALNIPKPNPPD
Trigger: GTCTGGAGGGTTTGGTTTGGGGATGTTCAGAGCCCAAAGATGTGACCTGGGTGGATGGGGAAACAGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494718.5
CDS CAA 72 bp ATCATAGGCAGCATTTGGACCCTTTGGGGTAGCATTTaGGGACTTAAAGGCTGCCTTGGGCTGCGTGTTGGG +
Preference number: 6 (lower is better)
Translates to: IIGSIWTLWGSI*GLKGCLGLRVG
Trigger: CCCAACACGCAGCCCAAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAAGGGTCCAAATGCTGCCTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 72 bp TCTCACTCAACCCAGAAGAAACCAATGGCACCAAAGTaGGCAGCGAAGTTGGCACTGGCTGTACCACCAGGA +
Preference number: 6 (lower is better)
Translates to: SHSTQKKPMAPK*AAKLALAVPPG
Trigger: TCCTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGGTTGAGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 90 bp CTGGGAAAAATCATAGGCAGCATTTGGACCCTTTGGGGTAGCATTTaGGGACTTAAAGGCTGCCTTGGGCTGCGTGTTGGGCACATCCTT +
Preference number: 6 (lower is better)
Translates to: LGKIIGSIWTLWGSI*GLKGCLGLRVGHIL
Trigger: AAGGATGTGCCCAACACGCAGCCCAAGGCAGCCTTTAAGTCCCAAAATGCTACCCCAAAGGGTCCAAATGCTGCCTATGATTTTTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS GCA 72 bp AACCCCATGGACCCTATATCCCCCAGAGACCCTAACTaGCCAATCCAAAGTGATGTACCTACCCAACATCTC +
Preference number: 6 (lower is better)
Translates to: NPMDPISPRDPN*PIQSDVPTQHL
Trigger: GAGATGTTGGGTAGGTACATCACTTTGGATTGGGCAGTTAGGGTCTCTGGGGGATATAGGGTCCATGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473931.1
ENST00000494718.5
CDS CAA 72 bp CAGAAGAAACCAATGGCACCAAAGTTGGCAGCGAAGTaGGCACTGGCTGTACCACCAGGACCAATAATGGGA +
Preference number: 6 (lower is better)
Translates to: QKKPMAPKLAAK*ALAVPPGPIMG
Trigger: TCCCATTATTGGTCCTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000473931.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 72 bp ACCCCCAGGTTAATGCAATCCTGGGACCATCCACTGTaGCCAAAGGATGGCACAAACAGGCAAGAGATGAGA +
Preference number: 6 (lower is better)
Translates to: TPRLMQSWDHPL*PKDGTNRQEMR
Trigger: TCTCATCTCTTGCCTGTTTGTGCCATCCTTTGGCAACAGTGGATGGTCCCAGGATTGCATTAACCTGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494718.5
CDS CAA 90 bp CCCACTTTAGTAGTGGCATTCTGGGCCTTGAAGGCCATCTCAGACTaGTTAGCAGCTAACTCACCAGTGGTTGCTGCCTGGGAAAAATCA +
Preference number: 6 (lower is better)
Translates to: PTLVVAFWALKAISD*LAANSPVVAAWEKS
Trigger: TGATTTTTCCCAGGCAGCAACCACTGGTGAGTTAGCTGCTAACAAGTCTGAGATGGCCTTCAAGGCCCAGAATGCCACTACTAAAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000470461.1
ENST00000482188.1
ENST00000485420.5
ENST00000494718.5
CDS CAA 90 bp TACCCAACATCTCACTCAACCCAGAAGAAACCAATGGCACCAAAGTaGGCAGCGAAGTTGGCACTGGCTGTACCACCAGGACCAATAATG +
Preference number: 6 (lower is better)
Translates to: YPTSHSTQKKPMAPK*AAKLALAVPPGPIM
Trigger: CATTATTGGTCCTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGGTTGAGTGAGATGTTGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473931.1
ENST00000494718.5
CDS CCA 72 bp CCCAGCCTTGGGAATGTCTACTGTGGGGATGGTGGATaGGCTTCACTTGCAAGACAACTGCTTAGAAAAGTA +
Preference number: 6 (lower is better)
Translates to: PSLGNVYCGDGG*ASLARQLLRKV
Trigger: TACTTTTCTAAGCAGTTGTCTTGCAAGTGAAGCCCATCCACCATCCCCACAGTAGACATTCCCAAGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494718.5
CDS CAA 90 bp TATCCAACATCTCACTCAACCCAGAAGAAACCAATGGCACCAAAGTaGGCAGCGAAGTTGGCACTGGCTGTACCACCAGGACCAATAATG +
Preference number: 6 (lower is better)
Translates to: YPTSHSTQKKPMAPK*AAKLALAVPPGPIM
Trigger: CATTATTGGTCCTGGTGGTACAGCCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGGTTGAGTGAGATGTTGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
CDS TCA 72 bp GTAATCTTGTCAGTGAGCCACAGAGGTCCATTGAAATaGGTACAATGCAGTGCAAAAGTGTCAGCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: VILSVSHRGPLK*VQCSAKVSAWP
Trigger: GGGCCAGGCTGACACTTTTGCACTGCATTGTACTCATTTCAATGGACCTCTGTGGCTCACTGACAAGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494718.5
CDS CCA 72 bp AATATCCAACATCTCACTCAACCCAGAAGAAACCAATaGCACCAAAGTTGGCAGCGAAGTTGGCACTGGCTG +
Preference number: 6 (lower is better)
Translates to: NIQHLTQPRRNQ*HQSWQRSWHWL
Trigger: CAGCCAGTGCCAACTTCGCTGCCAACTTTGGTGCCATTGGTTTCTTCTGGGTTGAGTGAGATGTTGGATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
CDS CAA 72 bp AGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATaGATAGCAATATCCAACATCTCACTCAACCCAGAA +
Preference number: 6 (lower is better)
Translates to: RLQPHTGERLLR*IAISNISLNPE
Trigger: TTCTGGGTTGAGTGAGATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
CDS CAA 90 bp AGGAATCTGAGGCTTCAGCCTCACACAGGGGAAAGACTACTGCGATaGATAGCAATATCCAACATCTCACTCAACCCAGAAGAAACCAAT +
Preference number: 6 (lower is better)
Translates to: RNLRLQPHTGERLLR*IAISNISLNPEETN
Trigger: ATTGGTTTCTTCTGGGTTGAGTGAGATGTTGGATATTGCTATCAATCGCAGTAGTCTTTCCCCTGTGTGAGGCTGAAGCCTCAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326587.12
ENST00000375695.2
ENST00000375722.5
ENST00000375772.7
ENST00000485420.5
CDS TCA 72 bp AGATTTCAGATAGCAACTCCCCCTTGGGCTCATTCCTaGACACCATCAGGGTATTTACCCCTTAATCATCAA +
Preference number: 6 (lower is better)
Translates to: RFQIATPPWAHS*TPSGYLPLNHQ
Trigger: TTGATGATTAAGGGGTAAATACCCTGATGGTGTTCAGGAATGAGCCCAAGGGGGAGTTGCTATCTGAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494718.5
CDS TCA 72 bp AATTTAACCATGAGGAGTATATGCAATAAATACTCCTaGGGACATAAGTGTTTCTGTATGCACAGAAACACA +
Preference number: 6 (lower is better)
Translates to: NLTMRSICNKYS*GHKCFCMHRNT
Trigger: TGTGTTTCTGTGCATACAGAAACACTTATGTCCTCAGGAGTATTTATTGCATATACTCCTCATGGTTAAATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494718.5