Pregenerated sensors for MAGEB5 (Homo sapiens)
Ensembl gene IDs: ENSG00000188408Ensembl transcript IDs: ENST00000602297.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | ATCTCTACTGTTAGCCCTTTCGTCAGATCCTGCATTAAAAACACCTaGAGAAGTCATGGTGCTGGATTCGCAAGGCTCCTGGGAAGTGCC | + |
Preference number: 5 (lower is better) Translates to: ISTVSPFVRSCIKNT*RSHGAGFARLLGSA Trigger: GGCACTTCCCAGGAGCCTTGCGAATCCAGCACCATGACTTCTGCAGGTGTTTTTAATGCAGGATCTGACGAAAGGGCTAACAGTAGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602297.1 |
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CDS CCA 72 bp | TGGGAAGTGCCACTTGACTCAGCAGCAGATGAGCTCTaGGGAATATCCCCAAGAATAGGAGAGGAAGTGGGG | + |
Preference number: 6 (lower is better) Translates to: WEVPLDSAADEL*GISPRIGEEVG Trigger: CCCCACTTCCTCTCCTATTCTTGGGGATATTCCCCAGAGCTCATCTGCTGCTGAGTCAAGTGGCACTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602297.1 |
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CDS CCA 72 bp | AGGAAGTGGGGAGGGGATCATCTTCCACTTATTCACTaGCCTGAGCTCCACTCTGAAGCAGAGAGTCATCTT | + |
Preference number: 6 (lower is better) Translates to: RKWGGDHLPLIH*PELHSEAESHL Trigger: AAGATGACTCTCTGCTTCAGAGTGGAGCTCAGGCCAGTGAATAAGTGGAAGATGATCCCCTCCCCACTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602297.1 |
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CDS GCA 72 bp | GTTAGCCCTTTCGTCAGATCCTGCATTAAAAACACCTaGAGAAGTCATGGTGCTGGATTCGCAAGGCTCCTG | + |
Preference number: 6 (lower is better) Translates to: VSPFVRSCIKNT*RSHGAGFARLL Trigger: CAGGAGCCTTGCGAATCCAGCACCATGACTTCTGCAGGTGTTTTTAATGCAGGATCTGACGAAAGGGCTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602297.1 |