Pregenerated sensors for MAGEB3 (Homo sapiens)
Ensembl gene IDs: ENSG00000198798Ensembl transcript IDs: ENST00000361644.4, ENST00000620842.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGGGTCTGTGCGAGACTaGACAGTGGAGGATAGACCC | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLGSVRD*TVEDRP Trigger: GGGTCTATCCTCCACTGTGCAGTCTCGCACAGACCC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGCAGGAGACCTGTCTTaGGAAATCCCCTCCCACGAG | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLAGDLS*EIPSHE Trigger: CTCGTGGGAGGGGATTTCCCAAGACAGGTCTCCTGC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR TCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTCTCTCTGAGGCTTCTTaGGAGCACTACGTGACCTAC | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLLSEAS*EHYVTY Trigger: GTAGGTCACGTAGTGCTCTCAAGAAGCCTCAGAGAG...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTTGCGAGACTGCACAGTaGAGGATAGACCCTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLCETAQ*RIDPER Trigger: TCTCTCAGGGTCTATCCTCCACTGTGCAGTCTCGCA...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR TCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGTGGATAGTGCTCTCTaGGGCTTCTTGAGAGCACTA | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLVDSAL*GFLRAL Trigger: TAGTGCTCTCAAGAAGCCTCAGAGAGCACTATCCAC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR GCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTCCTTGGAACACTTTCTaGCCATGGCACTACTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLPWNTF*PWHYCH Trigger: ATGGCAGTAGTGCCATGGGCAGAAAGTGTTCCAAGG...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR TCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTCTTGAGAGCACTACGTaGCCTACCAGCAGACTTTTT | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLLESTT*PTSRLF Trigger: AAAAAGTCTGCTGGTAGGTCACGTAGTGCTCTCAAG...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR TCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGTGGAGGATAGACCCTaGGAGAAGCTTTGCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLVEDRP*EKLCFF Trigger: GAAAAAGCAAAGCTTCTCTCAGGGTCTATCCTCCAC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR TCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGGAGATCCATTTTGCTaGCAAGGACATAGGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLGDPFC*QGHRSP Trigger: AGGACTCCTATGTCCTTGTCAGCAAAATGGATCTCC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTTCTTCATACCAGAACTaGAACGCACTGGGGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLSSYQN*NALGTV Trigger: AACTGTCCCCAGTGCGTTCCAGTTCTGGTATGAAGA...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR TCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTTGGGCTCCCCAAATATaGAGTGTTTCTTCCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLWAPQI*SVSSHH Trigger: ATGATGGGAAGAAACACTTCATATTTGGGGAGCCCA...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR TCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTACATATTTGTCTTCATaGTTAGAGGGTCTGTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLTYLSS*LEGLCE Trigger: CTCGCACAGACCCTCTAATCATGAAGACAAATATGT...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR GCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTATCATTGAGCATAGCTaGAGCTTGGACTCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLIIEHS*SLDSFF Trigger: GAAGAAAGAGTCCAAGCTGCAGCTATGCTCAATGAT...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR TCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGTTGGCTCCCTTGTATaGCTTTTTGTAAGAAACATC | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLVGSLV*LFVRNI Trigger: GATGTTTCTTACAAAAAGTCATACAAGGGAGCCAAC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR GCA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGCTTTTTCTCAATTTTaGTGTTGGCTCCCTTGTATG | + |
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Preference number: 4 (lower is better) Translates to: LGTVTALFNHKMQNLLQLAFSQF*CWLPCM Trigger: CATACAAGGGAGCCAACAGCAAAATTGAGAAAAAGC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS GCA 90 bp | CCACAGCCCTGCCACAACCTCCACCTCCCAGTCCTCGAACTCCTGTaGTTAAGCGATGAGGCTGGCTTCGTCCTCCCAAAATGTTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: PQPCHNLHLPVLELL*LSDEAGFVLPKCWD Trigger: ATCCCAACATTTTGGGAGGACGAAGCCAGCCTCATCGCTTAAGCACAGGAGTTCGAGGACTGGGAGGTGGAGGTTGTGGCAGGGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361644.4 |
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| CDS GCA 90 bp | AGAACCTCACTTCGCTGCTGGCCAGTCCTGGGACTCCACATTCCATaGCATGAATCCTGCTCAGATCAAGGTCCTCCGAGATCTAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RTSLRCWPVLGLHIP*HESCSDQGPPRSRL Trigger: CAGCCTAGATCTCGGAGGACCTTGATCTGAGCAGGATTCATGGCATGGAATGTGGAGTCCCAGGACTGGCCAGCAGCGAAGTGAGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361644.4 |
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| CDS TCA 90 bp | ATGATTAGAGGGTCTGTGCGAGACTGCACAGTGGAGGATAGACCCTaGGAGAAGCTTTGCTTTTTCTCAATTTTGCTGTTGGCTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: MIRGSVRDCTVEDRP*EKLCFFSILLLAPL Trigger: CAAGGGAGCCAACAGCAAAATTGAGAAAAAGCAAAGCTTCTCTCAGGGTCTATCCTCCACTGTGCAGTCTCGCACAGACCCTCTAATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361644.4 ENST00000620842.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTAGCAGGAGACCTGTCTaGGGAAATCCCCTCCCACGA | + |
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Preference number: 5 (lower is better) Translates to: LGTVTALFNHKMQNLLQLSRRPV*GNPLPR Trigger: TCGTGGGAGGGGATTTCCCAAGACAGGTCTCCTGCT...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTCTGCTAGCCTTGGCCTaGGAACACTTTCTGCCCATG | + |
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Preference number: 5 (lower is better) Translates to: LGTVTALFNHKMQNLLQLLLALA*EHFLPM Trigger: CATGGGCAGAAAGTGTTCCAAGGCCAAGGCTAGCAG...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGCACTACTGCCATCATaGAGCATAGCTGCAGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LGTVTALFNHKMQNLLQLALLPS*SIAAAW Trigger: CCAAGCTGCAGCTATGCTCAATGATGGCAGTAGTGC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGAAGAGCTGCTAGCCTaGGCCTTGGAACACTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LGTVTALFNHKMQNLLQLEELLA*ALEHFL Trigger: CAGAAAGTGTTCCAAGGCCAAGGCTAGCAGCTCTTC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTGTCACTGTCCCATTGTaGGGGAGATCCATTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LGTVTALFNHKMQNLLQLVTVPL*GRSILL Trigger: CAGCAAAATGGATCTCCCCAACAATGGGACAGTGAC...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTCGAGTCACTGTCCCATaGTTGGGGAGATCCATTTTG | + |
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Preference number: 5 (lower is better) Translates to: LGTVTALFNHKMQNLLQLRVTVP*LGRSIL Trigger: CAAAATGGATCTCCCCAACAATGGGACAGTGACTCG...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTACAGTTTTATTGACCTaGGCCCAAAACTCCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: LGTVTALFNHKMQNLLQLTVLLT*AQNSRT Trigger: GGTCCTGGAGTTTTGGGCCAAGGTCAATAAAACTGT...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS-3UTR CAA 90 bp | CTTGGAACAGTGACTGCCCTCTTTAACCACAAAATGCAAAATTTGCTTCAACTTACCCTGAGAGAAGCTTaGCTTTTTCTCAATTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LGTVTALFNHKMQNLLQLTLREA*LFLNFA Trigger: AGCAAAATTGAGAAAAAGCAAAGCTTCTCTCAGGGT...AAGTTGAAGCAAATTTTGCATTTTGTGGTTAAAGAGGGCAGTCACTGTTCCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000620842.1 |
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| CDS GCA 72 bp | GAGCCAGAGCCCTGCCTCCCAGTCCGCGAACTCCTGTaGTTAAGCGATGAGGCTGGCTTCCTCCGCCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: EPEPCLPVRELL*LSDEAGFLRPK Trigger: TTTTGGGCGGAGGAAGCCAGCCTCATCGCTTAAGCACAGGAGTTCGCGGACTGGGAGGCAGGGCTCTGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361644.4 |
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| CDS GCA 72 bp | TGCCACAACCTCCACCTCCCAGTCCTCGAACTCCTGTaGTTAAGCGATGAGGCTGGCTTCGTCCTCCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: CHNLHLPVLELL*LSDEAGFVLPK Trigger: TTTTGGGAGGACGAAGCCAGCCTCATCGCTTAAGCACAGGAGTTCGAGGACTGGGAGGTGGAGGTTGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361644.4 |
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| CDS GCA 72 bp | CACCACAACCTCCACCTCCCAGTCCTCGAACTCCTGTaGTTAAGCGATGAGGCTGGCTTCGTCCTCCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: HHNLHLPVLELL*LSDEAGFVLPK Trigger: TTTTGGGAGGACGAAGCCAGCCTCATCGCTTAAGCACAGGAGTTCGAGGACTGGGAGGTGGAGGTTGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361644.4 |
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| CDS CCA 72 bp | AGATCACGCCCAGGAGATTCAGCAGGAGACCTGTCTTaGGAAATCCCCTCCCACGAGTCACTGTCCCATTGT | + |
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Preference number: 6 (lower is better) Translates to: RSRPGDSAGDLS*EIPSHESLSHC Trigger: ACAATGGGACAGTGACTCGTGGGAGGGGATTTCCCAAGACAGGTCTCCTGCTGAATCTCCTGGGCGTGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361644.4 ENST00000620842.1 |
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| CDS CAA 72 bp | AAGATCACGCCCAGGAGATTCAGCAGGAGACCTGTCTaGGGAAATCCCCTCCCACGAGTCACTGTCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: KITPRRFSRRPV*GNPLPRVTVPL Trigger: CAATGGGACAGTGACTCGTGGGAGGGGATTTCCCAAGACAGGTCTCCTGCTGAATCTCCTGGGCGTGATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361644.4 ENST00000620842.1 |
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| CDS TCA 72 bp | CCACCTCCCAGTCCTCGAACTCCTGTGCTTAAGCGATaGGGCTGGCTTCGTCCTCCCAAAATGTTGGGATTA | + |
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Preference number: 6 (lower is better) Translates to: PPPSPRTPVLKR*GWLRPPKMLGL Trigger: TAATCCCAACATTTTGGGAGGACGAAGCCAGCCTCATCGCTTAAGCACAGGAGTTCGAGGACTGGGAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000361644.4 |
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| CDS GCA 72 bp | CCAGTCCTGGGACTCCACATTCCATGCCATGAATCCTaGTCAGATCAAGGTCCTCCGAGATCTAGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PVLGLHIPCHES*SDQGPPRSRLK Trigger: CTTCAGCCTAGATCTCGGAGGACCTTGATCTGAGCAGGATTCATGGCATGGAATGTGGAGTCCCAGGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361644.4 |
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| CDS TCA 72 bp | GGGTCTGTGCGAGACTGCACAGTGGAGGATAGACCCTaGGAGAAGCTTTGCTTTTTCTCAATTTTGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: GSVRDCTVEDRP*EKLCFFSILLL Trigger: CAACAGCAAAATTGAGAAAAAGCAAAGCTTCTCTCAGGGTCTATCCTCCACTGTGCAGTCTCGCACAGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361644.4 ENST00000620842.1 |
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