Pregenerated sensors for MAGEA6-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000286051Ensembl transcript IDs: ENST00000651163.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AATCACTGCCCTCTCTCTCCCTTAAACACACAGATTCTCTTTCCGTaGCACACAGCAACTACTGGGAGATGGGGCAGGGATGGTGTTAGC | + |
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Preference number: 5 (lower is better) Translates to: NHCPLSPLNTQILFP*HTATTGRWGRDGVS Trigger: GCTAACACCATCCCTGCCCCATCTCCCAGTAGTTGCTGTGTGGCACGGAAAGAGAATCTGTGTGTTTAAGGGAGAGAGAGGGCAGTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS CCA 90 bp | AACACACAGATTCTCTTTCCGTGCCACACAGCAACTACTGGGAGATaGGGCAGGGATGGTGTTAGCAATTCAAGACTGTCTCTCCTACCA | + |
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Preference number: 5 (lower is better) Translates to: NTQILFPCHTATTGR*GRDGVSNSRLSLLP Trigger: TGGTAGGAGAGACAGTCTTGAATTGCTAACACCATCCCTGCCCCATCTCCCAGTAGTTGCTGTGTGGCACGGAAAGAGAATCTGTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS TCA 72 bp | GACTACAGGCAAGCTGCAAGCTGTACTACCTGCAGTTaGGGGAGGGGTGGTACGAGCACCCGCTTGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: DYRQAASCTTCS*GRGGTSTRLAT Trigger: GGTGGCCAAGCGGGTGCTCGTACCACCCCTCCCTCAACTGCAGGTAGTACAGCTTGCAGCTTGCCTGTAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS GCA 72 bp | ACCCGCTTGGCCACCCCAGTTGGTATCTCACTAGGGTaGATGCCCCCTAAGTCCACTGGCTCTGAGCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: TRLATPVGISLG*MPPKSTGSELS Trigger: GCTAAGCTCAGAGCCAGTGGACTTAGGGGGCATGCACCCTAGTGAGATACCAACTGGGGTGGCCAAGCGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS CCA 72 bp | AGCTGCAAGCTGTACTACCTGCAGTTGAGGGAGGGGTaGTACGAGCACCCGCTTGGCCACCCCAGTTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: SCKLYYLQLREG*YEHPLGHPSWY Trigger: ATACCAACTGGGGTGGCCAAGCGGGTGCTCGTACCACCCCTCCCTCAACTGCAGGTAGTACAGCTTGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS CAA 72 bp | AGACTACAGGCAAGCTGCAAGCTGTACTACCTGCAGTaGAGGGAGGGGTGGTACGAGCACCCGCTTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RLQASCKLYYLQ*REGWYEHPLGH Trigger: GTGGCCAAGCGGGTGCTCGTACCACCCCTCCCTCAACTGCAGGTAGTACAGCTTGCAGCTTGCCTGTAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS TCA 72 bp | TTGACGCCATTCTCCTGCCTCAGCATCCCGAGTAGCTaGGACTACAGGCAAGCTGCAAGCTGTACTACCTGC | + |
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Preference number: 6 (lower is better) Translates to: LTPFSCLSIPSS*DYRQAASCTTC Trigger: GCAGGTAGTACAGCTTGCAGCTTGCCTGTAGTCTCAGCTACTCGGGATGCTGAGGCAGGAGAATGGCGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS GCA 72 bp | CCTCTCTCTCCCTTAAACACACAGATTCTCTTTCCGTaGCACACAGCAACTACTGGGAGATGGGGCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PLSPLNTQILFP*HTATTGRWGRD Trigger: ATCCCTGCCCCATCTCCCAGTAGTTGCTGTGTGGCACGGAAAGAGAATCTGTGTGTTTAAGGGAGAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS CCA 72 bp | ATTCTCTTTCCGTGCCACACAGCAACTACTGGGAGATaGGGCAGGGATGGTGTTAGCAATTCAAGACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ILFPCHTATTGR*GRDGVSNSRLS Trigger: AGACAGTCTTGAATTGCTAACACCATCCCTGCCCCATCTCCCAGTAGTTGCTGTGTGGCACGGAAAGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS GCA 72 bp | GCAGTAGTGAGTTCCAACGCAAAGTCCCACAATCACTaGCCTCTCTCTCCCTTAAACACACAGATTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: AVVSSNAKSHNH*PLSPLNTQILF Trigger: AAAGAGAATCTGTGTGTTTAAGGGAGAGAGAGGGCAGTGATTGTGGGACTTTGCGTTGGAACTCACTACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS GCA 72 bp | GACTTGCCCAAGAATTGTAATCCTTGTGGCCTAGACTaGCTTTCATTTAGCACCACGGACCACTTTAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DLPKNCNPCGLD*LSFSTTDHFSP Trigger: TGGACTAAAGTGGTCCGTGGTGCTAAATGAAAGGCAGTCTAGGCCACAAGGATTACAATTCTTGGGCAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS GCA 72 bp | TTAGCAATTCAAGACTGTCTCTCCTACCATCTTCAGTaGCCCTTTCAGTGGTATGAAGTTAGAACCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LAIQDCLSYHLQ*PFQWYEVRTRY Trigger: GTACCTGGTTCTAACTTCATACCACTGAAAGGGGCACTGAAGATGGTAGGAGAGACAGTCTTGAATTGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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| CDS TCA 72 bp | ATTAAAGTGCTTCTTTGTGTGGATAGTTGTTCAATTTaGTCTTCCTGCAGGGAGGACAATTGGTGGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: IKVLLCVDSCSI*SSCREDNWWRL Trigger: AAGCCTCCACCAATTGTCCTCCCTGCAGGAAGATCAAATTGAACAACTATCCACACAAAGAAGCACTTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651163.1 |
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