Pregenerated sensors for MAGEA11 (Homo sapiens)
Ensembl gene IDs: ENSG00000185247Ensembl transcript IDs: ENST00000333104.8, ENST00000355220.6, ENST00000412632.6, ENST00000518694.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCATTGGCCCATTTCCCTaGCCGCTGGCCCTGGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSIGPFP*PLALVA Trigger: TGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAAT...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCCATTTCCCTGCCCGCTaGCCCTGGTTGCATCTCATG | + |
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Preference number: 2 (lower is better) Translates to: QNGKHLHLKWISKTTCVVHFPAR*PWLHLM Trigger: CATGAGATGCAACCAGGGCCAGCGGGCAGGGAAATG...GACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAAATGTTATTGGCCCATTTCCCTaGCCGCTGGCCCTGGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: PRKYLLQITARWKISQNVIGPFP*PLALVA Trigger: TGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAAT...AACATTTTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAAATGTTTGTGGCCCTGAAGCATaGATTGGCCCATTTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PRKYLLQITARWKISQNVCGPEA*IGPFPC Trigger: GCAGGGAAATGGGCCAATGCATGCTTCAGGGCCACA...AACATTTTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAAATGTTCCCTTCCATTCACTGTaGCTTCTACTACTGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: PRKYLLQITARWKISQNVPFHSL*LLLLRT Trigger: TGTTCTCAGTAGTAGAAGGCACAGTGAATGGAAGGG...AACATTTTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTCACAACACCAGTTCAGCTTTATTGTTAAGTTCTTACATTCTCCAAGAAGCAAAACAACATGTGTaGTCAGTATCATCCATACAC | + |
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Preference number: 2 (lower is better) Translates to: LFHNTSSALLLSSYILQEAKQHV*SVSSIH Trigger: GTGTATGGATGATACTGACCACACATGTTGTTTTGC...TTCTTGGAGAATGTAAGAACTTAACAATAAAGCTGAACTGGTGTTGTGAAACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR GCA 72 bp | CAGGACAGGGAAACTGCTGGGTGTGGCCCTGAAGCATaGATTGGCCCATTTCCCTGCCCGCTGGCCCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: QDRETAGCGPEA*IGPFPCPLALV Trigger: AACCAGGGCCAGCGGGCAGGGAAATGGGCCAATGCATGCTTCAGGGCCACACCCAGCAGTTTCCCTGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR CAA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCGCCCTGAAGCATGCATaGGCCCATTTCCCTGCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSALKHA*AHFPAR Trigger: GCGGGCAGGGAAATGGGCCAATGCATGCTTCAGGGC...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR CAA 90 bp | CTGTTTCACAACACCAGTTCAGCTTTATTGTTAAGTTCTTACATTCTCCAAGAAGCCCTGAAGCATGCATaGGCCCATTTCCCTGCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: LFHNTSSALLLSSYILQEALKHA*AHFPAR Trigger: GCGGGCAGGGAAATGGGCCAATGCATGCTTCAGGGC...TTCTTGGAGAATGTAAGAACTTAACAATAAAGCTGAACTGGTGTTGTGAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR CAA 90 bp | CATTCTCCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAGGCAAACACTTGCACTaGAAATGGATAAGCAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: HSPRKYLLQITARWKISQGKHLH*KWISKT Trigger: TGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCC...TTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGGAGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR CAA 90 bp | CATTCTCCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAACAAAATGGCAAACACTaGCACTTGAAATGGATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSPRKYLLQITARWKISQQNGKH*HLKWIS Trigger: GCTTATCCATTTCAAGTGCAAGTGTTTGCCATTTTG...TTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGGAGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR-3UTR CAA 90 bp | CCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAAATGTTCAAAATGGCAAACACTaGCACTTGAAATGGATAAGC | + |
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Preference number: 3 (lower is better) Translates to: PRKYLLQITARWKISQNVQNGKH*HLKWIS Trigger: GCTTATCCATTTCAAGTGCAAGTGTTTGCCATTTTG...AACATTTTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| 3UTR CAA 72 bp | ACAGGGAAACTGCTGGGTGTGGCCCTGAAGCATGCATaGGCCCATTTCCCTGCCCGCTGGCCCTGGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: TGKLLGVALKHA*AHFPARWPWLH Trigger: ATGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAATGCATGCTTCAGGGCCACACCCAGCAGTTTCCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | CTGAAGCATGCATTGGCCCATTTCCCTGCCCGCTGGCCCTGGTTGCATCTCATGATTGGCCCATTTCCCTaGCCGCTGGCCCTGGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LKHALAHFPARWPWLHLMIGPFP*PLALVA Trigger: TGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAAT...CATGAGATGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAATGCATGCTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | CTGAAGCATGCATTGGCCCATTTCCCTGCCCGCTGGCCCTGGTTGCATCTCATGAAGAAGGCAGCCTCCTaGTCCTCAGCTTGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKHALAHFPARWPWLHLMKKAAS*SSAWRA Trigger: GGCTCTCCAAGCTGAGGAGCAGGAGGCTGCCTTCTT...CATGAGATGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAATGCATGCTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR TCA 90 bp | CTGAAGCATGCATTGGCCCATTTCCCTGCCCGCTGGCCCTGGTTGCATCTCATGGAGAAGGACTCTTCCTaGGGACTCTGGGGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LKHALAHFPARWPWLHLMEKDSS*GLWGGL Trigger: AAGTCCTCCCCAGAGTCCTCAGGAAGAGTCCTTCTC...CATGAGATGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAATGCATGCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | CTGAAGCATGCATTGGCCCATTTCCCTGCCCGCTGGCCCTGGTTGCATCTCATGTGTGGCCCTGAAGCATaGATTGGCCCATTTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKHALAHFPARWPWLHLMCGPEA*IGPFPC Trigger: GCAGGGAAATGGGCCAATGCATGCTTCAGGGCCACA...CATGAGATGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAATGCATGCTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | CTGAAGCATGCATTGGCCCATTTCCCTGCCCGCTGGCCCTGGTTGCATCTCATGATAGGCTCCCAAAGATaGCATCCATGGCAGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LKHALAHFPARWPWLHLMIGSQR*HPWQWE Trigger: CTCCCACTGCCATGGATGCCATCTTTGGGAGCCTAT...CATGAGATGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAATGCATGCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCCCTCCAGTGATCCTCTaGGTTCTCCTGGGACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSPPVIL*VLLGLL Trigger: CAGGAGTCCCAGGAGAACCCAGAGGATCACTGGAGG...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR TCA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCTCTTCTTCTTCCTCTTaGTGCTGGCAGGGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSSSSSS*CWQGCT Trigger: GGTGCAGCCCTGCCAGCATCAAGAGGAAGAAGAAGA...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCGTCACCAGCTCCACTTaGATAGCACCCACCTCTATG | + |
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Preference number: 4 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSVTSST*IAPTSM Trigger: CATAGAGGTGGGTGCTATGCAAGTGGAGCTGGTGAC...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333104.8 |
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| CDS-3UTR CCA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCATAGGCTCCCAAAGATaGCATCCATGGCAGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSIGSQR*HPWQWE Trigger: CTCCCACTGCCATGGATGCCATCTTTGGGAGCCTAT...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | AATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCAGTATTGGCCCATTTCCCTaGCCGCTGGCCCTGGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: NGKHLHLKWISKTTCVVSIGPFP*PLALVA Trigger: TGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAAT...ACTGACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCCAAAGATGGCATCCATaGCAGTGGGAGAGAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSQRWHP*QWERRT Trigger: AGTCCTTCTCTCCCACTGCCATGGATGCCATCTTTG...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR TCA 90 bp | CAAAATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCCTTGTTCTCCTCCAGTaGTCCTCTGGGTTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QNGKHLHLKWISKTTCVVLVLLQ*SSGFSW Trigger: CCAGGAGAACCCAGAGGATCACTGGAGGAGAACAAG...GACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | AATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCAGTCAGATTCCCAAGGCTTaGCTCCTCATGGAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: NGKHLHLKWISKTTCVVSQIPKA*LLMEPG Trigger: TCCAGGCTCCATGAGGAGGCAAGCCTTGGGAATCTG...ACTGACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | AATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCAGTACTGTGGGAAATATCTaGGTGATGGGGCCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: NGKHLHLKWISKTTCVVSTVGNI*VMGPHS Trigger: GCTGTGGGGCCCCATCACCCAGATATTTCCCACAGT...ACTGACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR TCA 90 bp | CATTCTCCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAGAGAAGGACTCTTCCTaGGGACTCTGGGGAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: HSPRKYLLQITARWKISQEKDSS*GLWGGL Trigger: AAGTCCTCCCCAGAGTCCTCAGGAAGAGTCCTTCTC...TTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGGAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | CTGTTTCACAACACCAGTTCAGCTTTATTGTTAAGTTCTTACATTCTCCAAGAAAAGAAGGCAGCCTCCTaGTCCTCAGCTTGGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LFHNTSSALLLSSYILQEKKAAS*SSAWRA Trigger: GGCTCTCCAAGCTGAGGAGCAGGAGGCTGCCTTCTT...TTCTTGGAGAATGTAAGAACTTAACAATAAAGCTGAACTGGTGTTGTGAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | CAAAATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCTGGCATCCATGGCAGTaGGAGAGAAGGACTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QNGKHLHLKWISKTTCVVWHPWQ*ERRTLP Trigger: AGGAAGAGTCCTTCTCTCCCACTGCCATGGATGCCA...GACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | CCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAAATGTTCATTTCCCTGCCCGCTaGCCCTGGTTGCATCTCATG | + |
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Preference number: 4 (lower is better) Translates to: PRKYLLQITARWKISQNVHFPAR*PWLHLM Trigger: CATGAGATGCAACCAGGGCCAGCGGGCAGGGAAATG...AACATTTTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR TCA 90 bp | CCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAAATGTTCTTGTTCTCCTCCAGTaGTCCTCTGGGTTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PRKYLLQITARWKISQNVLVLLQ*SSGFSW Trigger: CCAGGAGAACCCAGAGGATCACTGGAGGAGAACAAG...AACATTTTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | CTGTTTCACAACACCAGTTCAGCTTTATTGTTAAGTTCTTACATTCTCCAAGAAATTGTCAGCCTCCACTaGGGGTCAAGACAGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LFHNTSSALLLSSYILQEIVSLH*GSRQLP Trigger: AGGGAGCTGTCTTGACCCCCAGTGGAGGCTGACAAT...TTCTTGGAGAATGTAAGAACTTAACAATAAAGCTGAACTGGTGTTGTGAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333104.8 |
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| CDS-3UTR CCA 90 bp | CAAAATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCCCTAGCCTGTATCAATaGTCAGCCATCAGTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: QNGKHLHLKWISKTTCVVPSLYQ*SAISHQ Trigger: CTGGTGACTGATGGCTGACCATTGATACAGGCTAGG...GACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333104.8 |
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| CDS-3UTR CCA 90 bp | CCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAAATGTTACTGTGGGAAATATCTaGGTGATGGGGCCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: PRKYLLQITARWKISQNVTVGNI*VMGPHS Trigger: GCTGTGGGGCCCCATCACCCAGATATTTCCCACAGT...AACATTTTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | CATTCTCCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAATGGCATCCATGGCAGTaGGAGAGAAGGACTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HSPRKYLLQITARWKISQWHPWQ*ERRTLP Trigger: AGGAAGAGTCCTTCTCTCCCACTGCCATGGATGCCA...TTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | AATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCAGTCAAAGATGGCATCCATaGCAGTGGGAGAGAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: NGKHLHLKWISKTTCVVSQRWHP*QWERRT Trigger: AGTCCTTCTCTCCCACTGCCATGGATGCCATCTTTG...ACTGACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | AATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCAGTATGCCAAAGAGCAGTTaGATGCATACAGAGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NGKHLHLKWISKTTCVVSMPKSS*MHTEAS Trigger: GGAAGCCTCTGTATGCATGCAACTGCTCTTTGGCAT...ACTGACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | CAAAATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCCCCTTCCATTCACTGTaGCTTCTACTACTGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: QNGKHLHLKWISKTTCVVPFHSL*LLLLRT Trigger: TGTTCTCAGTAGTAGAAGGCACAGTGAATGGAAGGG...GACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | CCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAAATGTTATGCCAAAGAGCAGTTaGATGCATACAGAGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PRKYLLQITARWKISQNVMPKSS*MHTEAS Trigger: GGAAGCCTCTGTATGCATGCAACTGCTCTTTGGCAT...AACATTTTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR GCA 90 bp | CTGTTTCACAACACCAGTTCAGCTTTATTGTTAAGTTCTTACATTCTCCAAGAACCCTTCCATTCACTGTaGCTTCTACTACTGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: LFHNTSSALLLSSYILQEPFHSL*LLLLRT Trigger: TGTTCTCAGTAGTAGAAGGCACAGTGAATGGAAGGG...TTCTTGGAGAATGTAAGAACTTAACAATAAAGCTGAACTGGTGTTGTGAAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | CAAAATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCGCAAAACAACATGTGTaGTCAGTATCATCCATACAC | + |
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Preference number: 4 (lower is better) Translates to: QNGKHLHLKWISKTTCVVAKQHV*SVSSIH Trigger: GTGTATGGATGATACTGACCACACATGTTGTTTTGC...GACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CCA 90 bp | CATTCTCCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAATCATGTAGTATATCTTaGGAAAAGGACTCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HSPRKYLLQITARWKISQSCSIS*EKDSGS Trigger: AGACCCTGAGTCCTTTTCCCAAGATATACTACATGA...TTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGGAGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CAA 90 bp | CTGAAGCATGCATTGGCCCATTTCCCTGCCCGCTGGCCCTGGTTGCATCTCATGTGCTCACCTTGCTCATaGGTATTCCTAGCCTGTATC | + |
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Preference number: 5 (lower is better) Translates to: LKHALAHFPARWPWLHLMCSPCS*VFLACI Trigger: GATACAGGCTAGGAATACCAATGAGCAAGGTGAGCA...CATGAGATGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAATGCATGCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333104.8 |
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| CDS-3UTR CAA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCGGGGCCCCACAGCACTaGTTCTCCTCCAGTGATCCT | + |
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Preference number: 5 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSGAPQH*FSSSDP Trigger: AGGATCACTGGAGGAGAACAAGTGCTGTGGGGCCCC...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CAA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCTCAGATTCCCAAGGCTaGCCTCCTCATGGAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSSDSQG*PPHGAW Trigger: CCAGGCTCCATGAGGAGGCAAGCCTTGGGAATCTGA...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355220.6 |
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| CDS GCA 90 bp | TTCCTAGCCTGTATCAATGGTCAGCCATCAGTCACCAGCTCCACTTaGATAGCACCCACCTCTTGTCTGATTGTAGGTCTTAAACTCCCA | + |
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Preference number: 5 (lower is better) Translates to: FLACINGQPSVTSST*IAPTSCLIVGLKLP Trigger: TGGGAGTTTAAGACCTACAATCAGACAAGAGGTGGGTGCTATGCAAGTGGAGCTGGTGACTGATGGCTGACCATTGATACAGGCTAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518694.1 |
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| CDS-3UTR CAA 90 bp | CCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAAAATGTTGGGGCCCCACAGCACTaGTTCTCCTCCAGTGATCCT | + |
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Preference number: 5 (lower is better) Translates to: PRKYLLQITARWKISQNVGAPQH*FSSSDP Trigger: AGGATCACTGGAGGAGAACAAGTGCTGTGGGGCCCC...AACATTTTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CAA 90 bp | CAAGTCACCCGATGGAAGAGAAACCTAAAGGCAGTATACAATGTGTTCCCTTCCCCAAGAAAATACCTATaGCAAATCACAGCAAGATGG | + |
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Preference number: 5 (lower is better) Translates to: QVTRWKRNLKAVYNVFPSPRKYL*QITARW Trigger: CCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG...GGAAGGGAACACATTGTATACTGCCTTTAGGTTTCTCTTCCATCGGGTGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CAA 90 bp | AATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCAGTAACATAGTGCTCACCTaGCTCATTGGTATTCCTAGC | + |
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Preference number: 5 (lower is better) Translates to: NGKHLHLKWISKTTCVVSNIVLT*LIGIPS Trigger: GCTAGGAATACCAATGAGCAAGGTGAGCACTATGTT...ACTGACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333104.8 |
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| CDS-3UTR CAA 90 bp | AATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCAGTGGCAAACACTTGCACTaGAAATGGATAAGCAAAACA | + |
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Preference number: 5 (lower is better) Translates to: NGKHLHLKWISKTTCVVSGKHLH*KWISKT Trigger: TGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCC...ACTGACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CAA 90 bp | AATGGCAAACACTTGCACTTGAAATGGATAAGCAAAACAACATGTGTGGTCAGTCAAAATGGCAAACACTaGCACTTGAAATGGATAAGC | + |
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Preference number: 5 (lower is better) Translates to: NGKHLHLKWISKTTCVVSQNGKH*HLKWIS Trigger: GCTTATCCATTTCAAGTGCAAGTGTTTGCCATTTTG...ACTGACCACACATGTTGTTTTGCTTATCCATTTCAAGTGCAAGTGTTTGCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS-3UTR CAA 90 bp | CATTCTCCAAGAAAATACCTATTGCAAATCACAGCAAGATGGAAGATTTCCCAACCAAGAAAATACCTATaGCAAATCACAGCAAGATGG | + |
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Preference number: 5 (lower is better) Translates to: HSPRKYLLQITARWKISQPRKYL*QITARW Trigger: CCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGG...TTGGGAAATCTTCCATCTTGCTGTGATTTGCAATAGGTATTTTCTTGGAGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000333104.8 ENST00000355220.6 |
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| CDS CAA 90 bp | TCACACAGGACAGGGAAACTGCTGGGTGTGGCCCTGAAGCATGCATaGGCCCATTTCCCTGCCCGCTGGCCCTGGTTGCATCTCATGCTC | + |
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Preference number: 6 (lower is better) Translates to: SHRTGKLLGVALKHA*AHFPARWPWLHLML Trigger: GAGCATGAGATGCAACCAGGGCCAGCGGGCAGGGAAATGGGCCAATGCATGCTTCAGGGCCACACCCAGCAGTTTCCCTGTCCTGTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000333104.8 ENST00000355220.6 ENST00000518694.1 |
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| CDS CCA 72 bp | CTGGTTAGGTCAGCAGGCCGAACTGTGGGAAATATCTaGGTGATGGGGCCCCACAGCACTTGTTCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LVRSAGRTVGNI*VMGPHSTCSPP Trigger: TGGAGGAGAACAAGTGCTGTGGGGCCCCATCACCCAGATATTTCCCACAGTTCGGCCTGCTGACCTAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000333104.8 ENST00000355220.6 ENST00000412632.6 ENST00000518694.1 |
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| CDS GCA 72 bp | AATTGTCAGCCTCCACTGGGGGTCAAGACAGCTCCCTaGCCTTGTCTGATTGTAGGTCTTAAACTCCCATTT | + |
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Preference number: 6 (lower is better) Translates to: NCQPPLGVKTAP*PCLIVGLKLPF Trigger: AAATGGGAGTTTAAGACCTACAATCAGACAAGGGCAGGGAGCTGTCTTGACCCCCAGTGGAGGCTGACAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412632.6 |
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