Pregenerated sensors for MAFTRR (Homo sapiens)
Ensembl gene IDs: ENSG00000261390Ensembl transcript IDs: ENST00000562921.6, ENST00000566729.6, ENST00000567993.6, ENST00000568389.1, ENST00000654454.1, ENST00000657613.1, ENST00000658463.1, ENST00000662553.1, ENST00000668946.1, ENST00000669528.1, ENST00000670969.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAGGCACCCGCTTGTCCGTCCTGTCCCTTCAGGCTGCGCAACGCTaGAGGGCGATGGGAGCTCCACACAGGTGGGACGAGCCTAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GGTRLSVLSLQAAQR*RAMGAPHRWDEPSR Trigger: CCTGCTAGGCTCGTCCCACCTGTGTGGAGCTCCCATCGCCCTCCAGCGTTGCGCAGCCTGAAGGGACAGGACGGACAAGCGGGTGCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000562921.6 ENST00000566729.6 ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000662553.1 ENST00000668946.1 ENST00000669528.1 |
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| CDS CCA 90 bp | GCTTGTCCGTCCTGTCCCTTCAGGCTGCGCAACGCTGGAGGGCGATaGGAGCTCCACACAGGTGGGACGAGCCTAGCAGGTAAACCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ACPSCPFRLRNAGGR*ELHTGGTSLAGKPS Trigger: GGAAGGTTTACCTGCTAGGCTCGTCCCACCTGTGTGGAGCTCCCATCGCCCTCCAGCGTTGCGCAGCCTGAAGGGACAGGACGGACAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000562921.6 ENST00000566729.6 ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000662553.1 ENST00000668946.1 ENST00000669528.1 |
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| CDS GCA 90 bp | GTACACCCAGAGAACCGGTTAGAGTGTCAGGCTCAGCTCCATCATTaGTGGTTTGAAGATGGAGGAAGGGGCCATGAGCCCAGGAATCCA | + |
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Preference number: 5 (lower is better) Translates to: VHPENRLECQAQLHH*WFEDGGRGHEPRNP Trigger: TGGATTCCTGGGCTCATGGCCCCTTCCTCCATCTTCAAACCAGCAATGATGGAGCTGAGCCTGACACTCTAACCGGTTCTCTGGGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654454.1 ENST00000657613.1 ENST00000668946.1 ENST00000670969.1 |
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| CDS CCA 90 bp | GAGGAAGGGGCCATGAGCCCAGGAATCCAGGTAGACTCCAGAAGCTaGATAGGCCCTTTGGTGGTGCACATAGGAAAAACCAGCATTGTC | + |
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Preference number: 5 (lower is better) Translates to: EEGAMSPGIQVDSRS*IGPLVVHIGKTSIV Trigger: GACAATGCTGGTTTTTCCTATGTGCACCACCAAAGGGCCTATCCAGCTTCTGGAGTCTACCTGGATTCCTGGGCTCATGGCCCCTTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000567993.6 ENST00000662553.1 ENST00000668946.1 ENST00000670969.1 |
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| CDS GCA 90 bp | TCCTCATTTGTCACTCTGCTGGCTGCTCCAGGTCGTTCCAATCATTaGTGGTTTGAAGATGGAGGAAGGGGCCATGAGCCCAGGAATCCA | + |
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Preference number: 5 (lower is better) Translates to: SSFVTLLAAPGRSNH*WFEDGGRGHEPRNP Trigger: TGGATTCCTGGGCTCATGGCCCCTTCCTCCATCTTCAAACCAGCAATGATTGGAACGACCTGGAGCAGCCAGCAGAGTGACAAATGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562921.6 |
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| CDS CCA 90 bp | TCATTTGTCACTCTGCTGGCTGCTCCAGGTCGTTCCAATCATTGCTaGTTTGAAGATGGAGGAAGGGGCCATGAGCCCAGGAATCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SFVTLLAAPGRSNHC*FEDGGRGHEPRNPG Trigger: ACCTGGATTCCTGGGCTCATGGCCCCTTCCTCCATCTTCAAACCAGCAATGATTGGAACGACCTGGAGCAGCCAGCAGAGTGACAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562921.6 |
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| CDS CCA 90 bp | AGTGTTGAAGTTGGTTCAGCGTGTGTGTGTGTTTGTGCACGTGTATaGGTGTGTGTAAGGGCTGGGGGCTCAAGCATTGGCGGTAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SVEVGSACVCVCARV*VCVRAGGSSIGGSS Trigger: TGAGCTACCGCCAATGCTTGAGCCCCCAGCCCTTACACACACCCATACACGTGCACAAACACACACACACGCTGAACCAACTTCAACACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568389.1 |
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| CDS GCA 90 bp | CCTAGAATTGAAGCAACCGGGCAAAGGTGCCTTTTATTAGACCTTTaGAGTACACCCAGAGAACCGGTTAGAGTGTCAGGCTCAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PRIEATGQRCLLLDL*STPREPVRVSGSAP Trigger: TGGAGCTGAGCCTGACACTCTAACCGGTTCTCTGGGTGTACTGCAAAGGTCTAATAAAAGGCACCTTTGCCCGGTTGCTTCAATTCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000668946.1 ENST00000669528.1 ENST00000670969.1 |
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| CDS CCA 90 bp | GCTTCTTCAGCTAGATTCTGTCCTCTTCCTCATTTGTCACTCTGCTaGCTGCTCCAGGTCGTTCCAATCATTGCTGGTTTGAAGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: ASSARFCPLPHLSLC*LLQVVPIIAGLKME Trigger: CTCCATCTTCAAACCAGCAATGATTGGAACGACCTGGAGCAGCCAGCAGAGTGACAAATGAGGAAGAGGACAGAATCTAGCTGAAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562921.6 |
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| CDS GCA 90 bp | AGAGCTTCTTCAGCTAGATTCTGTCCTCTTCCTCATTTGTCACTCTaGTGGCTGCTCCAGGTCGTTCCAATCATTGCTGGTTTGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: RASSARFCPLPHLSL*WLLQVVPIIAGLKM Trigger: CATCTTCAAACCAGCAATGATTGGAACGACCTGGAGCAGCCAGCAGAGTGACAAATGAGGAAGAGGACAGAATCTAGCTGAAGAAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562921.6 |
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| CDS CCA 90 bp | AGAAAAGCTGACATGTTGCTAATGGATCAGGTTACCTACATTTCTTaGGGTGGCCCTCTTTTTCTAGTCCCGTTGCAGCTTCCAGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: RKADMLLMDQVTYIS*GGPLFLVPLQLPGN Trigger: GTTGCCTGGAAGCTGCAACGGGACTAGAAAAAGAGGGCCACCCCAAGAAATGTAGGTAACCTGATCCATTAGCAACATGTCAGCTTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662553.1 |
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| CDS GCA 90 bp | TCAAACATTGAACAGCTTCCTAGAATTGAAGCAACCGGGCAAAGGTaGCTTTTATTAGACCTTTGCAGTACACCCAGAGAACCGGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: SNIEQLPRIEATGQR*LLLDLCSTPREPVR Trigger: TCTAACCGGTTCTCTGGGTGTACTGCAAAGGTCTAATAAAAGGCACCTTTGCCCGGTTGCTTCAATTCTAGGAAGCTGTTCAATGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000668946.1 ENST00000669528.1 ENST00000670969.1 |
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| CDS CCA 90 bp | TCATGCCATTTCTTTCTGGCCAGGAACAAAGGTAAGACAAGAGGTTaGTCCATGCCAGAAAGTCTGAAAGTATGCGGGTTAAATGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SCHFFLARNKGKTRG*SMPESLKVCGLNVS Trigger: GGAAACATTTAACCCGCATACTTTCAGACTTTCTGGCATGGACCAACCTCTTGTCTTACCTTTGTTCCTGGCCAGAAAGAAATGGCATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS GCA 90 bp | CATGCCAGAAAGTCTGAAAGTATGCGGGTTAAATGTTTCCAAGTGTaGTGTTTGGTGTTTGGGATCATTTGTTCTTTGCCAAGCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: HARKSESMRVKCFQV*CLVFGIICSLPSCV Trigger: GACACAGCTTGGCAAAGAACAAATGATCCCAAACACCAAACAGCACACTTGGAAACATTTAACCCGCATACTTTCAGACTTTCTGGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS GCA 90 bp | AAAGGTAAGACAAGAGGTTGGTCCATGCCAGAAAGTCTGAAAGTATaGGGGTTAAATGTTTCCAAGTGTGCTGTTTGGTGTTTGGGATCA | + |
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Preference number: 5 (lower is better) Translates to: KGKTRGWSMPESLKV*GLNVSKCAVWCLGS Trigger: TGATCCCAAACACCAAACAGCACACTTGGAAACATTTAACCCGCATACTTTCAGACTTTCTGGCATGGACCAACCTCTTGTCTTACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS CCA 90 bp | GAAAGTCTGAAAGTATGCGGGTTAAATGTTTCCAAGTGTGCTGTTTaGTGTTTGGGATCATTTGTTCTTTGCCAAGCTGTGTCTAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: ESLKVCGLNVSKCAV*CLGSFVLCQAVSKG Trigger: CCCCTTAGACACAGCTTGGCAAAGAACAAATGATCCCAAACACCAAACAGCACACTTGGAAACATTTAACCCGCATACTTTCAGACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS CCA 90 bp | TACTCATGTGCTTTCTTTGTGAGTTCAAGCACTCAAGACTTCAAATaGTATCTTCCAGAGCTTCTTCAGCTAGATTCTGTCCTCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: YSCAFFVSSSTQDFK*YLPELLQLDSVLFL Trigger: GAGGAAGAGGACAGAATCTAGCTGAAGAAGCTCTGGAAGATACCATTTGAAGTCTTGAGTGCTTGAACTCACAAAGAAAGCACATGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS CCA 90 bp | CAAAGAGGTTATAAAAACTGTCCATCTTTTCATGCCATTTCTTTCTaGCCAGGAACAAAGGTAAGACAAGAGGTTGGTCCATGCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: QRGYKNCPSFHAISF*PGTKVRQEVGPCQK Trigger: TTTCTGGCATGGACCAACCTCTTGTCTTACCTTTGTTCCTGGCCAGAAAGAAATGGCATGAAAAGATGGACAGTTTTTATAACCTCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS GCA 72 bp | AGGAGGCACCCGCTTGTCCGTCCTGTCCCTTCAGGCTaGGCAACGCTGGAGGGCGATGGGAGCTCCACACAG | + |
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Preference number: 6 (lower is better) Translates to: RRHPLVRPVPSG*ATLEGDGSSTQ Trigger: CTGTGTGGAGCTCCCATCGCCCTCCAGCGTTGCGCAGCCTGAAGGGACAGGACGGACAAGCGGGTGCCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000562921.6 ENST00000566729.6 ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000662553.1 ENST00000668946.1 ENST00000669528.1 ENST00000670969.1 |
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| CDS CCA 72 bp | CGCTTGTCCGTCCTGTCCCTTCAGGCTGCGCAACGCTaGAGGGCGATGGGAGCTCCACACAGGTGGGACGAG | + |
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Preference number: 6 (lower is better) Translates to: RLSVLSLQAAQR*RAMGAPHRWDE Trigger: CTCGTCCCACCTGTGTGGAGCTCCCATCGCCCTCCAGCGTTGCGCAGCCTGAAGGGACAGGACGGACAAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000562921.6 ENST00000566729.6 ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000662553.1 ENST00000668946.1 ENST00000669528.1 ENST00000670969.1 |
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| CDS CCA 72 bp | TCCTGTCCCTTCAGGCTGCGCAACGCTGGAGGGCGATaGGAGCTCCACACAGGTGGGACGAGCCTAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SCPFRLRNAGGR*ELHTGGTSLAG Trigger: ACCTGCTAGGCTCGTCCCACCTGTGTGGAGCTCCCATCGCCCTCCAGCGTTGCGCAGCCTGAAGGGACAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000562921.6 ENST00000566729.6 ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000662553.1 ENST00000668946.1 ENST00000669528.1 |
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| CDS GCA 72 bp | GTCACTCTGCTGGCTGCTCCAGGTCGTTCCAATCATTaGTGGTTTGAAGATGGAGGAAGGGGCCATGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: VTLLAAPGRSNH*WFEDGGRGHEP Trigger: GGGCTCATGGCCCCTTCCTCCATCTTCAAACCAGCAATGATTGGAACGACCTGGAGCAGCCAGCAGAGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562921.6 |
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| CDS CCA 72 bp | ACTCTGCTGGCTGCTCCAGGTCGTTCCAATCATTGCTaGTTTGAAGATGGAGGAAGGGGCCATGAGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TLLAAPGRSNHC*FEDGGRGHEPR Trigger: CCTGGGCTCATGGCCCCTTCCTCCATCTTCAAACCAGCAATGATTGGAACGACCTGGAGCAGCCAGCAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562921.6 |
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| CDS CCA 72 bp | GTTGGTTCAGCGTGTGTGTGTGTTTGTGCACGTGTATaGGTGTGTGTAAGGGCTGGGGGCTCAAGCATTGGC | + |
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Preference number: 6 (lower is better) Translates to: VGSACVCVCARV*VCVRAGGSSIG Trigger: GCCAATGCTTGAGCCCCCAGCCCTTACACACACCCATACACGTGCACAAACACACACACACGCTGAACCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568389.1 |
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| CDS CAA 90 bp | TTGTCACTCTGCTGGCTGCTCCAGGTCGTTCCAATCATTGCTGGTTaGAAGATGGAGGAAGGGGCCATGAGCCCAGGAATCCAGGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSLCWLLQVVPIIAG*KMEEGAMSPGIQVD Trigger: GTCTACCTGGATTCCTGGGCTCATGGCCCCTTCCTCCATCTTCAAACCAGCAATGATTGGAACGACCTGGAGCAGCCAGCAGAGTGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562921.6 |
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| CDS CAA 90 bp | GAAGGAGCAGGGGACAATTGCTTGGATGACAACTGGATAGGCCCTTaGGTGGTGCACATAGGAAAAACCAGCATTGTCCAGGGTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: EGAGDNCLDDNWIGP*VVHIGKTSIVQGPW Trigger: CCAAGGACCCTGGACAATGCTGGTTTTTCCTATGTGCACCACCAAAGGGCCTATCCAGTTGTCATCCAAGCAATTGTCCCCTGCTCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568389.1 |
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| CDS GCA 72 bp | GAAGCAACCGGGCAAAGGTGCCTTTTATTAGACCTTTaGAGTACACCCAGAGAACCGGTTAGAGTGTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: EATGQRCLLLDL*STPREPVRVSG Trigger: GCCTGACACTCTAACCGGTTCTCTGGGTGTACTGCAAAGGTCTAATAAAAGGCACCTTTGCCCGGTTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000668946.1 ENST00000669528.1 ENST00000670969.1 |
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| CDS CAA 72 bp | GGAATCCAGGTAGACTCCAGAAGCTGGATAGGCCCTTaGGTGGTGCACATAGGAAAAACCAGCATTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GIQVDSRSWIGP*VVHIGKTSIVQ Trigger: CTGGACAATGCTGGTTTTTCCTATGTGCACCACCAAAGGGCCTATCCAGCTTCTGGAGTCTACCTGGATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000567993.6 ENST00000662553.1 ENST00000668946.1 ENST00000670969.1 |
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| CDS CCA 72 bp | GTTGCTAATGGATCAGGTTACCTACATTTCTTGGGGTaGCCCTCTTTTTCTAGTCCCGTTGCAGCTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VANGSGYLHFLG*PSFSSPVAASR Trigger: CCTGGAAGCTGCAACGGGACTAGAAAAAGAGGGCCACCCCAAGAAATGTAGGTAACCTGATCCATTAGCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662553.1 |
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| CDS CAA 72 bp | AGAGCTTCTTCAGCTAGATTCTGTCCTCTTCCTCATTaGTCACTCTGCTGGCTGCTCCAGGTCGTTCCAATC | + |
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Preference number: 6 (lower is better) Translates to: RASSARFCPLPH*SLCWLLQVVPI Trigger: GATTGGAACGACCTGGAGCAGCCAGCAGAGTGACAAATGAGGAAGAGGACAGAATCTAGCTGAAGAAGCTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS CAA 72 bp | GGGGACAATTGCTTGGATGACAACTGGATAGGCCCTTaGGTGGTGCACATAGGAAAAACCAGCATTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GDNCLDDNWIGP*VVHIGKTSIVQ Trigger: CTGGACAATGCTGGTTTTTCCTATGTGCACCACCAAAGGGCCTATCCAGTTGTCATCCAAGCAATTGTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568389.1 |
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| CDS CAA 90 bp | GTATCTTCCAGAGCTTCTTCAGCTAGATTCTGTCCTCTTCCTCATTaGTCACTCTGCTGGCTGCTCCAGGTCGTTCCAATCATTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: VSSRASSARFCPLPH*SLCWLLQVVPIIAG Trigger: ACCAGCAATGATTGGAACGACCTGGAGCAGCCAGCAGAGTGACAAATGAGGAAGAGGACAGAATCTAGCTGAAGAAGCTCTGGAAGATAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562921.6 |
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| CDS CAA 90 bp | ACAGAGAGATGTGATGTGAAAAAGACTCAACTCACCATTGCTGGTTaGAAGATGGAGGAAGGGGCCATGAGCCCAGGAATCCAGGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: TERCDVKKTQLTIAG*KMEEGAMSPGIQVD Trigger: GTCTACCTGGATTCCTGGGCTCATGGCCCCTTCCTCCATCTTCAAACCAGCAATGGTGAGTTGAGTCTTTTTCACATCACATCTCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000566729.6 ENST00000662553.1 |
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| CDS CCA 72 bp | GGCTCAGCTCCATCTGATTTCTTCAAGGAATGTCTGTaGAGACTCCATAGGATCTCCAAGGATAAGGACCTC | + |
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Preference number: 6 (lower is better) Translates to: GSAPSDFFKECL*RLHRISKDKDL Trigger: GAGGTCCTTATCCTTGGAGATCCTATGGAGTCTCCACAGACATTCCTTGAAGAAATCAGATGGAGCTGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000567993.6 ENST00000669528.1 |
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| CDS CCA 72 bp | TATGAAGGAGCAGGGGACAATTGCTTGGATGACAACTaGATAGGCCCTTTGGTGGTGCACATAGGAAAAACC | + |
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Preference number: 6 (lower is better) Translates to: YEGAGDNCLDDN*IGPLVVHIGKT Trigger: GGTTTTTCCTATGTGCACCACCAAAGGGCCTATCCAGTTGTCATCCAAGCAATTGTCCCCTGCTCCTTCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568389.1 |
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| CDS GCA 72 bp | CCTCCTGGGCAATTTCCATTTTCTAAACCGAGGTCCTaGTTTTTCAGCAAGGAAACTGTGCTAAATGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PPGQFPFSKPRS*FFSKETVLNAP Trigger: GGGAGCATTTAGCACAGTTTCCTTGCTGAAAAAGCAGGACCTCGGTTTAGAAAATGGAAATTGCCCAGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568389.1 |
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| CDS CCA 72 bp | GACATGTTGCTAATGGATCAGGTTACCTACATTTCTTaGGGTGGCCCTCTTTTTCTAGTCCCGTTGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: DMLLMDQVTYIS*GGPLFLVPLQL Trigger: AAGCTGCAACGGGACTAGAAAAAGAGGGCCACCCCAAGAAATGTAGGTAACCTGATCCATTAGCAACATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662553.1 |
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| CDS GCA 72 bp | GAACAGCTTCCTAGAATTGAAGCAACCGGGCAAAGGTaGCTTTTATTAGACCTTTGCAGTACACCCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: EQLPRIEATGQR*LLLDLCSTPRE Trigger: TTCTCTGGGTGTACTGCAAAGGTCTAATAAAAGGCACCTTTGCCCGGTTGCTTCAATTCTAGGAAGCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000668946.1 ENST00000669528.1 ENST00000670969.1 |
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| CDS TCA 72 bp | ATGGAGGAGAGGGCAGAAGATGATCACAGAGAGATGTaGTGTGAAAAAGACTCAACTCACCATTGCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: MEERAEDDHREM*CEKDSTHHCWF Trigger: AAACCAGCAATGGTGAGTTGAGTCTTTTTCACATCACATCTCTCTGTGATCATCTTCTGCCCTCTCCTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000566729.6 ENST00000662553.1 |
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| CDS TCA 72 bp | GGCTTGCTTGAAATTCTGGCTCATTTTCTTTGTATCTaGGTAGCCCTGGTGAGTCTGAATTTCCCTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: GLLEILAHFLCI*VALVSLNFPIC Trigger: ACAGATAGGGAAATTCAGACTCACCAGGGCTACTCAGATACAAAGAAAATGAGCCAGAATTTCAAGCAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS CAA 72 bp | TGCGGGTTAAATGTTTCCAAGTGTGCTGTTTGGTGTTaGGGATCATTTGTTCTTTGCCAAGCTGTGTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: CGLNVSKCAVWC*GSFVLCQAVSK Trigger: CTTAGACACAGCTTGGCAAAGAACAAATGATCCCAAACACCAAACAGCACACTTGGAAACATTTAACCCGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS TCA 72 bp | GCTCAAGTGCTAGTGTGTACTCATGTGCTTTCTTTGTaGGTTCAAGCACTCAAGACTTCAAATGGTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: AQVLVCTHVLSL*VQALKTSNGIF Trigger: GAAGATACCATTTGAAGTCTTGAGTGCTTGAACTCACAAAGAAAGCACATGAGTACACACTAGCACTTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS CCA 72 bp | GCTTTCTTTGTGAGTTCAAGCACTCAAGACTTCAAATaGTATCTTCCAGAGCTTCTTCAGCTAGATTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AFFVSSSTQDFK*YLPELLQLDSV Trigger: GACAGAATCTAGCTGAAGAAGCTCTGGAAGATACCATTTGAAGTCTTGAGTGCTTGAACTCACAAAGAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS CAA 72 bp | GAAAGTATGCGGGTTAAATGTTTCCAAGTGTGCTGTTaGGTGTTTGGGATCATTTGTTCTTTGCCAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ESMRVKCFQVCC*VFGIICSLPSC Trigger: ACAGCTTGGCAAAGAACAAATGATCCCAAACACCAAACAGCACACTTGGAAACATTTAACCCGCATACTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS CCA 72 bp | AAAAATGTTTCTGTTGGTACAGTTATCTTAACCACCTaGGTACTTGACTTGACTTACGGCATTAAGAGTATA | + |
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Preference number: 6 (lower is better) Translates to: KNVSVGTVILTT*VLDLTYGIKSI Trigger: TATACTCTTAATGCCGTAAGTCAAGTCAAGTACCCAGGTGGTTAAGATAACTGTACCAACAGAAACATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000562921.6 ENST00000654454.1 ENST00000658463.1 ENST00000668946.1 |
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| CDS CAA 72 bp | TGTTTTCAAATGAGTATGGAGAAATATAGTCAAACATaGAACAGCTTCCTAGAATTGAAGCAACCGGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: CFQMSMEKYSQT*NSFLELKQPGK Trigger: TTTGCCCGGTTGCTTCAATTCTAGGAAGCTGTTCAATGTTTGACTATATTTCTCCATACTCATTTGAAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000567993.6 ENST00000654454.1 ENST00000657613.1 ENST00000658463.1 ENST00000668946.1 ENST00000669528.1 ENST00000670969.1 |
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