RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAFK (Homo sapiens)

Ensembl gene IDs: ENSG00000198517

Ensembl transcript IDs: ENST00000343242.9, ENST00000403150.5, ENST00000406174.2

Found 340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGGGTGTGCGCGCAGGAGCCACGTCCACGAAGCTCTCCTGGACTaGTGCCTGCTGCCTCCCCACCCGCCGCGCCCTCTGGAGTGCCAG +
Preference number: 1 (lower is better)
Translates to: WGCARRSHVHEALLD*CLLPPHPPRPLECQ
Trigger: CTGGCACTCCAGAGGGCGCGGCGGGTGGGGAGGCAGCAGGCACCAGTCCAGGAGAGCTTCGTGGACGTGGCTCCTGCGCGCACACCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 90 bp CGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTaGGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGGG +
Preference number: 1 (lower is better)
Translates to: RGHQEPQDGTEPATR*GLSCGAQLPGTVRG
Trigger: CCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CCA 90 bp GGGACTGCGGAGTCGGTCAGGGCAGTGAGGGGCTCCCGCACCGGCTaGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGG +
Preference number: 1 (lower is better)
Translates to: GTAESVRAVRGSRTG*EAVAGQVSKAAYSR
Trigger: CCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGTGCGGGAGCCCCTCACTGCCCTGACCGACTCCGCAGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CCA 90 bp CTGAGTGCTGAGGCCAGCCACACCTGCAGCCCGTGGCTGTGCTCCTaGGGGTGTGCGCGCAGGAGCCACGTCCACGAAGCTCTCCTGGAC +
Preference number: 1 (lower is better)
Translates to: LSAEASHTCSPWLCS*GCARRSHVHEALLD
Trigger: GTCCAGGAGAGCTTCGTGGACGTGGCTCCTGCGCGCACACCCCCAGGAGCACAGCCACGGGCTGCAGGTGTGGCTGGCCTCAGCACTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 90 bp ACGCGGATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTaGCGACACACCATCCATGCTCCTCCCCGGGGACTGCGGAGTCGG +
Preference number: 1 (lower is better)
Translates to: TRITGTATGQLEGRS*RHTIHAPPRGLRSR
Trigger: CCGACTCCGCAGTCCCCGGGGAGGAGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR TCA 90 bp AATTCCCACACACAGACACATCCTGCGGGGAGCAGGTGGCGGGCGTaGGTGTGTCTGTGGACCGGCGTGCAGCTCTGGGCCCACGGGAGC +
Preference number: 1 (lower is better)
Translates to: NSHTQTHPAGSRWRA*VCLWTGVQLWAHGS
Trigger: GCTCCCGTGGGCCCAGAGCTGCACGCCGGTCCACAGACACACTCACGCCCGCCACCTGCTCCCCGCAGGATGTGTCTGTGTGTGGGAATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR TCA 90 bp CTTGGAAGGAGGAGCAGGCAAAGGCTCCGGGTGAGGACTGAGTGCTaGGGCCAGCCACACCTGCAGCCCGTGGCTGTGCTCCTGGGGGTG +
Preference number: 1 (lower is better)
Translates to: LGRRSRQRLRVRTEC*GQPHLQPVAVLLGV
Trigger: CACCCCCAGGAGCACAGCCACGGGCTGCAGGTGTGGCTGGCCTCAGCACTCAGTCCTCACCCGGAGCCTTTGCCTGCTCCTCCTTCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 90 bp CAAGCTGCACCCCCTCAGCCCTGCTGCTTTGATGGCAGGCGTGCGTaGACACACACAGACACCACCCCACGCAGGCGACCTCCCACACCG +
Preference number: 1 (lower is better)
Translates to: QAAPPQPCCFDGRRA*THTDTTPRRRPPTP
Trigger: CGGTGTGGGAGGTCGCCTGCGTGGGGTGGTGTCTGTGTGTGTGCACGCACGCCTGCCATCAAAGCAGCAGGGCTGAGGGGGTGCAGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 90 bp ACCACGGCCACGGGGGCAACGGCTGTTTGGGAACACGCAGGCCTTTaGTCTGTAGGGACCCAGTGGTCCTGGCGGGCCTGCAGCTTCCCA +
Preference number: 1 (lower is better)
Translates to: TTATGATAVWEHAGL*SVGTQWSWRACSFP
Trigger: TGGGAAGCTGCAGGCCCGCCAGGACCACTGGGTCCCTACAGAGCAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCCCGTGGCCGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 90 bp CCACTCACGCAGGCCCCTGCTAAGGCAGACGCGGATCACGGGCACTaGAACGGGACAGCTGGAAGGACGGAGCTGCCGACACACCATCCA +
Preference number: 1 (lower is better)
Translates to: PLTQAPAKADADHGH*NGTAGRTELPTHHP
Trigger: TGGATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGCGTCTGCCTTAGCAGGGGCCTGCGTGAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR TCA 90 bp CACGGGAGCCCACTCTTCACCCTGCAATACAGTCTCTTCCTGGTGTaGGCTGCCTGCGCCCGAGGGGCCTGCGCTTGGACTCGGATGTCG +
Preference number: 1 (lower is better)
Translates to: HGSPLFTLQYSLFLV*AACARGACAWTRMS
Trigger: CGACATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCAGGCAGCTCACACCAGGAAGAGACTGTATTGCAGGGTGAAGAGTGGGCTCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR TCA 90 bp CAGTGCTCTTGGAAGGAGGAGCAGGCAAAGGCTCCGGGTGAGGACTaGGTGCTGAGGCCAGCCACACCTGCAGCCCGTGGCTGTGCTCCT +
Preference number: 1 (lower is better)
Translates to: QCSWKEEQAKAPGED*VLRPATPAARGCAP
Trigger: AGGAGCACAGCCACGGGCTGCAGGTGTGGCTGGCCTCAGCACTCAGTCCTCACCCGGAGCCTTTGCCTGCTCCTCCTTCCAAGAGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 90 bp ACACACAGCCTGAGTCCTGCTCACCGTCAAATGATGGGGCGCTCCTaGCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTC +
Preference number: 1 (lower is better)
Translates to: THSLSPAHRQMMGRS*LCPLRSGTACGVGV
Trigger: GACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGCCCCATCATTTGACGGTGAGCAGGACTCAGGCTGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 90 bp TACAAGCCAGCTGCATCCTGGTCCTGCCCCTCAAGGCTTTCCACCTaGTCTCGCACACGGCTCCCGCCTCCTCCCACCACTCCACGCAAC +
Preference number: 1 (lower is better)
Translates to: YKPAASWSCPSRLST*SRTRLPPPPTTPRN
Trigger: GTTGCGTGGAGTGGTGGGAGGAGGCGGGAGCCGTGTGCGAGAGCAGGTGGAAAGCCTTGAGGGGCAGGACCAGGATGCAGCTGGCTTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 90 bp CTCCCGCACCGGCTGGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTaGTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACCTGACC +
Preference number: 1 (lower is better)
Translates to: LPHRLGGRGRTGVEG*LQQEWKTSPMLDLT
Trigger: GGTCAGGTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGTGCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 90 bp ACGGCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTaGCCGTGCCCCCGGCTCTGCTCTGATAGATTTACAGTATCAAAC +
Preference number: 1 (lower is better)
Translates to: TAGSPGLRFAPNSHL*PCPRLCSDRFTVSN
Trigger: GTTTGATACTGTAAATCTATCAGAGCAGAGCCGGGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTGCCCGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 90 bp GAGCCCACTCTTCACCCTGCAATACAGTCTCTTCCTGGTGTGAGCTaGCTGCGCCCGAGGGGCCTGCGCTTGGACTCGGATGTCGAGAGT +
Preference number: 1 (lower is better)
Translates to: EPTLHPAIQSLPGVS*LRPRGLRLDSDVES
Trigger: ACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCAGGCAGCTCACACCAGGAAGAGACTGTATTGCAGGGTGAAGAGTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 90 bp GGACCCTCAAGGCGGCTCTCCAGGAAAAGGAAGCCCAAGGTGGAGTaGCAAGCCCACTGGTGCCTCAGTGCTCTTGGAAGGAGGAGCAGG +
Preference number: 1 (lower is better)
Translates to: GPSRRLSRKRKPKVE*QAHWCLSALGRRSR
Trigger: CCTGCTCCTCCTTCCAAGAGCACTGAGGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGCCGCCTTGAGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR CCA 90 bp AGTGCCAGGCTCACTCCTGAGCTCTTCTACAAGCCAGCTGCATCCTaGTCCTGCCCCTCAAGGCTTTCCACCTGCTCTCGCACACGGCTC +
Preference number: 1 (lower is better)
Translates to: SARLTPELFYKPAAS*SCPSRLSTCSRTRL
Trigger: GAGCCGTGTGCGAGAGCAGGTGGAAAGCCTTGAGGGGCAGGACCAGGATGCAGCTGGCTTGTAGAAGAGCTCAGGAGTGAGCCTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR CCA 90 bp AGGAGGGACCCTCAAGGCGGCTCTCCAGGAAAAGGAAGCCCAAGGTaGAGTGCCAAGCCCACTGGTGCCTCAGTGCTCTTGGAAGGAGGA +
Preference number: 1 (lower is better)
Translates to: RRDPQGGSPGKGSPR*SAKPTGASVLLEGG
Trigger: TCCTCCTTCCAAGAGCACTGAGGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGCCGCCTTGAGGGTCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR CCA 90 bp ATCCAATATGGATTACCTACCACGGCCACGGGGGCAACGGCTGTTTaGGAACACGCAGGCCTTTGCTCTGTAGGGACCCAGTGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: IQYGLPTTATGATAV*EHAGLCSVGTQWSW
Trigger: CCAGGACCACTGGGTCCCTACAGAGCAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCCCGTGGCCGTGGTAGGTAATCCATATTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 90 bp GAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTaGAAGATACCAATTCCCACACACAGACACATCCTGCGGGGAGCA +
Preference number: 1 (lower is better)
Translates to: ELPEGLSIICPDSHG*KIPIPTHRHILRGA
Trigger: TGCTCCCCGCAGGATGTGTCTGTGTGTGGGAATTGGTATCTTGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 90 bp CTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCCCCGGCTCTaGTCTGATAGATTTACAGTATCAAACTGGAAAAGAAAGATTGTT +
Preference number: 1 (lower is better)
Translates to: LRFAPNSHLCPCPRL*SDRFTVSNWKRKIV
Trigger: AACAATCTTTCTTTTCCAGTTTGATACTGTAAATCTATCAGAGCAGAGCCGGGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR CCA 90 bp CGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGGGGGGCCGGATCCCGTaGGCAGGGGCTTCTGCGCTG +
Preference number: 2 (lower is better)
Translates to: RPPAAACPAGPSCLVQSVGGRIP*AGASAL
Trigger: CAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCCCC...CACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCG
76% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CCA 90 bp CGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGACCGGCGTGCAGCTCTaGGCCCACGGGAGCCCACTC +
Preference number: 2 (lower is better)
Translates to: RPPAAACPAGPSCLVQSVTGVQL*AHGSPL
Trigger: GAGTGGGCTCCCGTGGGCCCAGAGCTGCACGCCGGT...CACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CCA 90 bp ACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGGCTCCCGCACCGGCTaGGAGGCCGTGGCAGGACAG +
Preference number: 2 (lower is better)
Translates to: TPRRDRTGHPLRPVLRGPGSRTG*EAVAGQ
Trigger: CTGTCCTGCCACGGCCTCCCAGCCGGTGCGGGAGCC...TGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR TCA 90 bp GAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCAGTCGGTCAGGGCAGTaGGGGGCTCCCGCACCGGCT +
Preference number: 2 (lower is better)
Translates to: EPQDGTEPATRCGLSCGASRSGQ*GAPAPA
Trigger: AGCCGGTGCGGGAGCCCCTCACTGCCCTGACCGACT...GGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp GCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCCCTGCGCCCGAGGGGCCTaGGCTTGGACTCGGATGTCG +
Preference number: 2 (lower is better)
Translates to: AGSPGLRFAPNSHLCPCPCARGA*AWTRMS
Trigger: CGACATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCA...GGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTGCCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp GACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTCGACCTCCCACACCGTaGCCACTCACGCAGGCCCCT +
Preference number: 2 (lower is better)
Translates to: DGTEPATRCGLSCGAQLPRPPTP*PLTQAP
Trigger: AGGGGCCTGCGTGAGTGGGCACGGTGTGGGAGGTCG...AGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp CCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCCGACCTCCCACACCGTaGCCACTCACGCAGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PKTGQNRPPAAACPAGPSRPPTP*PLTQAP
Trigger: AGGGGCCTGCGTGAGTGGGCACGGTGTGGGAGGTCG...GCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp GGGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGTCTGTGGACCGGCGTaGAGCTCTGGGCCCACGGGA +
Preference number: 2 (lower is better)
Translates to: GAGSRGQGLLRCAARPPRVCGPA*SSGPTG
Trigger: TCCCGTGGGCCCAGAGCTGCACGCCGGTCCACAGAC...CCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CCA 90 bp GAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGGGGCCTGACTCCTaGGGCCGTGTCTTCCGGCAG +
Preference number: 2 (lower is better)
Translates to: EPQDGTEPATRCGLSCGAQGPDS*GRVFRQ
Trigger: CTGCCGGAAGACACGGCCCCAGGAGTCAGGCCCCTG...GGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR TCA 90 bp CCAGCTCTGGGCGGTGACAGCGGCTCCGTCCACCCTGGGGACCAGGGAGTCCCTCCTGCCTGTGTCCGCTaGGATCCGGGACGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: PALGGDSGSVHPGDQGVPPACVR*DPGRPV
Trigger: CACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGG...AGGGACTCCCTGGTCCCCAGGGTGGACGGAGCCGCTGTCACCGCCCAGAGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp CCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCGCGGATCACGGGCACTaGAACGGGACAGCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: PKTGQNRPPAAACPAGPSADHGH*NGTAGR
Trigger: CCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGC...GCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp GGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGCCCCCTCAGCCCTGCTaGTTTGATGGCAGGCGTGCG +
Preference number: 2 (lower is better)
Translates to: GPDPVGRGFCAVLHDLLGPPQPC*FDGRRA
Trigger: CGCACGCCTGCCATCAAAGCAGCAGGGCTGAGGGGG...CCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp CCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTCTCTCTGCCATGTGTaGCCACAGGCCCTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: PKTGQNRPPAAACPAGPSSLCHV*PQALPQ
Trigger: CTGGGGGAGGGCCTGTGGGCACACATGGCAGAGAGA...GCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CCA 90 bp GCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTCTGACCGGCGTGCAGCTCTaGGCCCACGGGAGCCCACTC +
Preference number: 2 (lower is better)
Translates to: ALLPVSAEIRDGLWGRCLTGVQL*AHGSPL
Trigger: GAGTGGGCTCCCGTGGGCCCAGAGCTGCACGCCGGT...CAGACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp CCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCATGATGGGGCGCTCCTaGCTGTGTCCGCTGAGATCC +
Preference number: 2 (lower is better)
Translates to: PKTGQNRPPAAACPAGPSMMGRS*LCPLRS
Trigger: GGATCTCAGCGGACACAGGCAGGAGCGCCCCATCAT...GCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CCA 90 bp GCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCCCGGGGCAACGGCTGTTTaGGAACACGCAGGCCTTTGC +
Preference number: 2 (lower is better)
Translates to: AGSPGLRFAPNSHLCPCPGATAV*EHAGLC
Trigger: GCAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCC...GGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR TCA 90 bp AGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGGACGGGGCAGGGCCCAGCTCTGGGCGGTaGCAGCGGCTCCGTCCACCC +
Preference number: 2 (lower is better)
Translates to: SSRTHGNKLGGGRRDGAGPSSGR*QRLRPP
Trigger: GGGTGGACGGAGCCGCTGTCACCGCCCAGAGCTGGG...CCCTGCCCCGTCCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR GCA 90 bp GTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGTCACCAGAGCACCTTCCTGGTGTGAGCTaGCTGCGCCCGAGGGGCCTG +
Preference number: 2 (lower is better)
Translates to: VGRGFCAVLHDLLGSPEHLPGVS*LRPRGL
Trigger: CAGGCCCCTCGGGCGCAGGCAGCTCACACCAGGAAG...GTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp GCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCCCCTGGAAGGACGGAGCTaGCGACACACCATCCATGCT +
Preference number: 2 (lower is better)
Translates to: AGSPGLRFAPNSHLCPCPLEGRS*RHTIHA
Trigger: AGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAG...GGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTGCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CCA 90 bp GGCCCAGCTGCCTGGTACAGTCCGTGGGGAGATGAAGGGGGACGGCGGGCAGCCCTGCAACGGGACAGCTaGAAGGACGGAGCTGCCGAC +
Preference number: 2 (lower is better)
Translates to: GPAAWYSPWGDEGGRRAALQRDS*KDGAAD
Trigger: GTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAG...GGCTGCCCGCCGTCCCCCTTCATCTCCCCACGGACTGTACCAGGCAGCTGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR TCA 90 bp GAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCAGACCTCACGACGTGTaGGCCACTCTCTCTGCCATG +
Preference number: 2 (lower is better)
Translates to: EPQDGTEPATRCGLSCGARPHDV*ATLSAM
Trigger: CATGGCAGAGAGAGTGGCTCACACGTCGTGAGGTCT...GGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp GTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGTCACCAGAGCACCCCCCTCAGCCCTGCTaGTTTGATGGCAGGCGTGCG +
Preference number: 2 (lower is better)
Translates to: VGRGFCAVLHDLLGSPEHPPQPC*FDGRRA
Trigger: CGCACGCCTGCCATCAAAGCAGCAGGGCTGAGGGGG...GTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp GCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTCTGGCACCCCCTCAGCCCTaGTGCTTTGATGGCAGGCGT +
Preference number: 2 (lower is better)
Translates to: ALLPVSAEIRDGLWGRCLAPPQP*CFDGRR
Trigger: ACGCCTGCCATCAAAGCAGCAGGGCTGAGGGGGTGC...CAGACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGGGACCCAGTGGTCCTaGCGGGCCTGCAGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPGTQWS*RACSFP
Trigger: TGGGAAGCTGCAGGCCCGCCAGGACCACTGGGTCCC...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR CAA 90 bp TACCACGGCCACGGGGGCAACGGCTGTTTGGGAACACGCAGGCCTTaGCTCTGTAGGGACCCAGTGGTCCTGGCGGGCCTGCAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: YHGHGGNGCLGTRRP*LCRDPVVLAGLQLP
Trigger: GGGAAGCTGCAGGCCCGCCAGGACCACTGGGTCCCTACAGAGCAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCCCGTGGCCGTGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR TCA 90 bp AGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCGTATCAAACGTCAAATaGTGGGGCGCTCCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: RRDRTGHPLRPVLRGPAAVSNVK*WGAPAC
Trigger: ACAGGCAGGAGCGCCCCATCATTTGACGTTTGATAC...GGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
3UTR-3UTR GCA 90 bp GGCGGCTCTCCAGGAAAAGGAAGCCCAAGGTGGAGTGCCAAGCCCACTGGTGCCCTCCTCCCCGGGGACTaGGGAGTCGGTCAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: GGSPGKGSPRWSAKPTGALLPGD*GVGQGS
Trigger: ACTGCCCTGACCGACTCCGCAGTCCCCGGGGAGGAG...GGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR GCA 90 bp AGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCCCGTGCCCCCGGCTCTaGTCTGATAGATTTACAGTA +
Preference number: 2 (lower is better)
Translates to: RRDRTGHPLRPVLRGPAAPCPRL*SDRFTV
Trigger: TACTGTAAATCTATCAGAGCAGAGCCGGGGGCACGG...GGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR TCA 90 bp GCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGCCTGCCTGTGTCCGCTaGGATCCGGGACGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: AGRSPRPTRRGHQEPQDGPACVR*DPGRPV
Trigger: CACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGG...CCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp CACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCTCCTCCCCGGGGACTaGGGAGTCGGTCAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: HKTWTPRTPRRDRTGHPLLLPGD*GVGQGS
Trigger: ACTGCCCTGACCGACTCCGCAGTCCCCGGGGAGGAG...CAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp GGCGGCTCTCCAGGAAAAGGAAGCCCAAGGTGGAGTGCCAAGCCCACTGGTGCCGGGGCTTCTGCGCTGTaGTGCACGACCTCCTCGGGT +
Preference number: 2 (lower is better)
Translates to: GGSPGKGSPRWSAKPTGAGASAL*CTTSSG
Trigger: ACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCC...GGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR CCA 90 bp ATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCCGACACACCATCCCGGCTGGGAGGCCGTaGCAGGACAGGTGTCGAAGG +
Preference number: 2 (lower is better)
Translates to: ITGTATGQLEGRSCRHTIPAGRP*QDRCRR
Trigger: CCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGG...GATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR TCA 90 bp GATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGTCACCAAGACCTCACGACGTGTaGGCCACTCTCTCTGCCATG +
Preference number: 2 (lower is better)
Translates to: DPVGRGFCAVLHDLLGSPRPHDV*ATLSAM
Trigger: CATGGCAGAGAGAGTGGCTCACACGTCGTGAGGTCT...TGGTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCCGACACACCATCCATaGTCCTCCCCGGGGACTGCG +
Preference number: 2 (lower is better)
Translates to: KHCRPRAGRSPRPTRRGHPTHHP*SSPGTA
Trigger: CGCAGTCCCCGGGGAGGAGCATGGATGGTGTGTCGG...GTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp AATGATGGGGCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTGATGGCAGGCGTGCGTaGACACACACAGACACCACC +
Preference number: 2 (lower is better)
Translates to: NDGALLPVSAEIRDGLWGDGRRA*THTDTT
Trigger: GGTGGTGTCTGTGTGTGTGCACGCACGCCTGCCATC...ACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGCCCCATCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACGGGGCTTCTGCGCTGTaGTGCACGACCTCCTCGGGT +
Preference number: 2 (lower is better)
Translates to: KHCRPRAGRSPRPTRRGHGASAL*CTTSSG
Trigger: ACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCC...GTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CAA 90 bp CAGTCTCTTCCTGGTGTGAGCTGCCTGCGCCCGAGGGGCCTGCGCTaGGACTCGGATGTCGAGAGTCTGCATCCCAGTGACAGGTACGAG +
Preference number: 2 (lower is better)
Translates to: QSLPGVSCLRPRGLR*DSDVESLHPSDRYE
Trigger: CTCGTACCTGTCACTGGGATGCAGACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCAGGCAGCTCACACCAGGAAGAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp ACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTGCATGCGCCCGAGGGGCCTaGGCTTGGACTCGGATGTCG +
Preference number: 2 (lower is better)
Translates to: TRNFPRAFPLYVPTPTGACARGA*AWTRMS
Trigger: CGACATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCA...TGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp ACTCCCACGGGTGCAAGATACCAATTCCCACACACAGACACATCCTGCGGGGAGGTCTGTGGACCGGCGTaGAGCTCTGGGCCCACGGGA +
Preference number: 2 (lower is better)
Translates to: TPTGARYQFPHTDTSCGEVCGPA*SSGPTG
Trigger: TCCCGTGGGCCCAGAGCTGCACGCCGGTCCACAGAC...CTCCCCGCAGGATGTGTCTGTGTGTGGGAATTGGTATCTTGCACCCGTGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTCCCGACTCCCACGGGTaGAAGATACCAATTCCCACA +
Preference number: 2 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPPDSHG*KIPIPT
Trigger: TGTGGGAATTGGTATCTTGCACCCGTGGGAGTCGGG...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp CACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGGATGGCAGGCGTGCGTaGACACACACAGACACCACC +
Preference number: 2 (lower is better)
Translates to: HKTWTPRTPRRDRTGHPLDGRRA*THTDTT
Trigger: GGTGGTGTCTGTGTGTGTGCACGCACGCCTGCCATC...CAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp AAGACCTGGATCTCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACCGCTGCGGCCTGTCCTaGGGGGCCCAGCTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: KTWISLGSRRHGDRKQTHRCGLS*GAQLPG
Trigger: ACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCG...GTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR CCA 90 bp GCTCTCCAGGAAAAGGAAGCCCAAGGTGGAGTGCCAAGCCCACTGGTGCCTCAGCGAGGGGCCTGCGCTTaGACTCGGATGTCGAGAGTC +
Preference number: 2 (lower is better)
Translates to: ALQEKEAQGGVPSPLVPQRGACA*TRMSRV
Trigger: GACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCG...CTGAGGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR GCA 90 bp ACCGGCTGGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTCGGATGTCGAGAGTCTaGATCCCAGTGACAGGTACG +
Preference number: 2 (lower is better)
Translates to: TGWEAVAGQVSKAAYSRSRMSRV*IPVTGT
Trigger: CGTACCTGTCACTGGGATGCAGACTCTCGACATCCG...ACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp CGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGACAGGTGTCGAAGGCTaGTTACAGCAGGAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: RGHQEPQDGTEPATRCGLTGVEG*LQQEWK
Trigger: TTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT...CAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR TCA 90 bp GACCCAGTGGTCCTGGCGGGCCTGCAGCTTCCCACTCAACTTCTAACAGTAGACCTGCTCACCGTCAAATaGTGGGGCGCTCCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: DPVVLAGLQLPTQLLTVDLLTVK*WGAPAC
Trigger: ACAGGCAGGAGCGCCCCATCATTTGACGGTGAGCAG...GTCTACTGTTAGAAGTTGAGTGGGAAGCTGCAGGCCCGCCAGGACCACTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR GCA 90 bp GCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGCGGATGTCGAGAGTCTaGATCCCAGTGACAGGTACG +
Preference number: 2 (lower is better)
Translates to: AGRSPRPTRRGHQEPQDGRMSRV*IPVTGT
Trigger: CGTACCTGTCACTGGGATGCAGACTCTCGACATCCG...CCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CAA 90 bp CATCCAATATGGATTACCTACCACGGCCACGGGGGCAACGGCTGTTaGGGAACACGCAGGCCTTTGCTCTGTAGGGACCCAGTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: HPIWITYHGHGGNGC*GTRRPLLCRDPVVL
Trigger: CAGGACCACTGGGTCCCTACAGAGCAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCCCGTGGCCGTGGTAGGTAATCCATATTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR TCA 90 bp AAGACCTGGATCTCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACGCTCCGGGTGAGGACTaGGTGCTGAGGCCAGCCACA +
Preference number: 2 (lower is better)
Translates to: KTWISLGSRRHGDRKQTHAPGED*VLRPAT
Trigger: TGTGGCTGGCCTCAGCACTCAGTCCTCACCCGGAGC...GTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR CCA 90 bp TGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATCGAGGGGCCTGCGCTTaGACTCGGATGTCGAGAGTC +
Preference number: 2 (lower is better)
Translates to: WQDRCRRLLTAGVENKPHRGACA*TRMSRV
Trigger: GACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCG...ATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR GCA 90 bp CCGGCAGCCCCCACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTGCCCACTCTTCACCCTaGAATACAGTCTCTTCCTGG +
Preference number: 2 (lower is better)
Translates to: PAAPTEDAELPEGLSIICAHSSP*NTVSSW
Trigger: CCAGGAAGAGACTGTATTGCAGGGTGAAGAGTGGGC...ACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGTGGGGGCTGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CCA 90 bp AAGACCTGGATCTCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACCTGCAACGGGACAGCTaGAAGGACGGAGCTGCCGAC +
Preference number: 2 (lower is better)
Translates to: KTWISLGSRRHGDRKQTHLQRDS*KDGAAD
Trigger: GTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAG...GTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR GCA 90 bp TGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCCCACTCTTCACCCTaGAATACAGTCTCTTCCTGG +
Preference number: 2 (lower is better)
Translates to: WQDRCRRLLTAGVENKPHAHSSP*NTVSSW
Trigger: CCAGGAAGAGACTGTATTGCAGGGTGAAGAGTGGGC...ATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CCA 72 bp CCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTaGGGAGATGAAGGGGGACGGCGGGCAGCCCGGGCC +
Preference number: 3 (lower is better)
Translates to: PVLRGPAAWYSP*GDEGGRRAARA
Trigger: GGCCCGGGCTGCCCGCCGTCCCCCTTCATCTCCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 72 bp GACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTaGGGGGCCCAGCTGCCTGGTACAGTCCGTGGGGAG +
Preference number: 3 (lower is better)
Translates to: DGTEPATRCGLS*GAQLPGTVRGE
Trigger: CTCCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 72 bp GGGGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTaGTGCACGACCTCCTCGGGTCACCAGAGCACAGGG +
Preference number: 3 (lower is better)
Translates to: GGRIPWAGASAL*CTTSSGHQSTG
Trigger: CCCTGTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CCA 72 bp AGCCAGGGCCCCAGGCACCACCTTGCAGGTCTTATGTaGCGGCCCCCGGCCGGCGGCTCACATTCCGCCAGC +
Preference number: 3 (lower is better)
Translates to: SQGPRHHLAGLM*RPPAGGSHSAS
Trigger: GCTGGCGGAATGTGAGCCGCCGGCCGGGGGCCGCCACATAAGACCTGCAAGGTGGTGCCTGGGGCCCTGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR CAA 90 bp CGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGCTCAGCCCTGCTGCTTaGATGGCAGGCGTGCGTGCA +
Preference number: 3 (lower is better)
Translates to: RPPAAACPAGPSCLVQSVLSPAA*MAGVRA
Trigger: TGCACGCACGCCTGCCATCAAAGCAGCAGGGCTGAG...CACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CAA 90 bp AGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCGGGGGCAACGGCTGTTaGGGAACACGCAGGCCTTTG +
Preference number: 3 (lower is better)
Translates to: RRDRTGHPLRPVLRGPAAGGNGC*GTRRPL
Trigger: CAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCCC...GGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 72 bp GGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTaGACGACCTCCTCGGGTCACCAGAGCACAGGGGAG +
Preference number: 3 (lower is better)
Translates to: GRIPWAGASALC*TTSSGHQSTGE
Trigger: CTCCCCTGTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CCA 72 bp GAGTCGGTCAGGGCAGTGAGGGGCTCCCGCACCGGCTaGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: ESVRAVRGSRTG*EAVAGQVSKAA
Trigger: AGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGTGCGGGAGCCCCTCACTGCCCTGACCGACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CCA 72 bp GAGGCCAGCCACACCTGCAGCCCGTGGCTGTGCTCCTaGGGGTGTGCGCGCAGGAGCCACGTCCACGAAGCT +
Preference number: 3 (lower is better)
Translates to: EASHTCSPWLCS*GCARRSHVHEA
Trigger: AGCTTCGTGGACGTGGCTCCTGCGCGCACACCCCCAGGAGCACAGCCACGGGCTGCAGGTGTGGCTGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 72 bp CAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTaGGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACA +
Preference number: 3 (lower is better)
Translates to: QEPQDGTEPATR*GLSCGAQLPGT
Trigger: TGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CAA 90 bp GTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGTCACCAGAGCACCCGAGGGGCCTGCGCTaGGACTCGGATGTCGAGAGT +
Preference number: 3 (lower is better)
Translates to: VGRGFCAVLHDLLGSPEHPRGLR*DSDVES
Trigger: ACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCGG...GTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 72 bp ACAGCTGGAAGGACGGAGCTGCCGACACACCATCCATaGTCCTCCCCGGGGACTGCGGAGTCGGTCAGGGCA +
Preference number: 3 (lower is better)
Translates to: TAGRTELPTHHP*SSPGTAESVRA
Trigger: TGCCCTGACCGACTCCGCAGTCCCCGGGGAGGAGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 72 bp ACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTaGCGACACACCATCCATGCTCCTCCCCGGGGACTG +
Preference number: 3 (lower is better)
Translates to: TGTATGQLEGRS*RHTIHAPPRGL
Trigger: CAGTCCCCGGGGAGGAGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 72 bp CAGGCCCCTGCTAAGGCAGACGCGGATCACGGGCACTaGAACGGGACAGCTGGAAGGACGGAGCTGCCGACA +
Preference number: 3 (lower is better)
Translates to: QAPAKADADHGH*NGTAGRTELPT
Trigger: TGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGCGTCTGCCTTAGCAGGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 72 bp CCCCCTCAGCCCTGCTGCTTTGATGGCAGGCGTGCGTaGACACACACAGACACCACCCCACGCAGGCGACCT +
Preference number: 3 (lower is better)
Translates to: PPQPCCFDGRRA*THTDTTPRRRP
Trigger: AGGTCGCCTGCGTGGGGTGGTGTCTGTGTGTGTGCACGCACGCCTGCCATCAAAGCAGCAGGGCTGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 72 bp GCTGCATCCTGGTCCTGCCCCTCAAGGCTTTCCACCTaGTCTCGCACACGGCTCCCGCCTCCTCCCACCACT +
Preference number: 3 (lower is better)
Translates to: AASWSCPSRLST*SRTRLPPPPTT
Trigger: AGTGGTGGGAGGAGGCGGGAGCCGTGTGCGAGAGCAGGTGGAAAGCCTTGAGGGGCAGGACCAGGATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 72 bp ACGGGGGCAACGGCTGTTTGGGAACACGCAGGCCTTTaGTCTGTAGGGACCCAGTGGTCCTGGCGGGCCTGC +
Preference number: 3 (lower is better)
Translates to: TGATAVWEHAGL*SVGTQWSWRAC
Trigger: GCAGGCCCGCCAGGACCACTGGGTCCCTACAGAGCAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR CCA 72 bp GGCAGACGCGGATCACGGGCACTGCAACGGGACAGCTaGAAGGACGGAGCTGCCGACACACCATCCATGCTC +
Preference number: 3 (lower is better)
Translates to: GRRGSRALQRDS*KDGAADTPSML
Trigger: GAGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGCGTCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CCA 72 bp GGGCCGGGGTCCCCACGCCCTGGAAACGCAAAGACCTaGATCTCTTTGGGAAGCCGGAGGCACGGAGACAGA +
Preference number: 3 (lower is better)
Translates to: GPGSPRPGNAKT*ISLGSRRHGDR
Trigger: TCTGTCTCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCTTTGCGTTTCCAGGGCGTGGGGACCCCGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 72 bp AGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTaGCCGTGCCCCCGGCTCTGCTCTGATAGATTTACA +
Preference number: 3 (lower is better)
Translates to: SPGLRFAPNSHL*PCPRLCSDRFT
Trigger: TGTAAATCTATCAGAGCAGAGCCGGGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR-3UTR CAA 90 bp GACCCAGTGGTCCTGGCGGGCCTGCAGCTTCCCACTCAACTTCTAACAGTAGACGCCCCAGGCACCACCTaGCAGGTCTTATGTGGCGGC +
Preference number: 3 (lower is better)
Translates to: DPVVLAGLQLPTQLLTVDAPGTT*QVLCGG
Trigger: GCCGCCACATAAGACCTGCAAGGTGGTGCCTGGGGC...GTCTACTGTTAGAAGTTGAGTGGGAAGCTGCAGGCCCGCCAGGACCACTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 72 bp CTTCACCCTGCAATACAGTCTCTTCCTGGTGTGAGCTaGCTGCGCCCGAGGGGCCTGCGCTTGGACTCGGAT +
Preference number: 3 (lower is better)
Translates to: LHPAIQSLPGVS*LRPRGLRLDSD
Trigger: ATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCAGGCAGCTCACACCAGGAAGAGACTGTATTGCAGGGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CCA 72 bp GGATTACCTACCACGGCCACGGGGGCAACGGCTGTTTaGGAACACGCAGGCCTTTGCTCTGTAGGGACCCAG +
Preference number: 3 (lower is better)
Translates to: GLPTTATGATAV*EHAGLCSVGTQ
Trigger: CTGGGTCCCTACAGAGCAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCCCGTGGCCGTGGTAGGTAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 72 bp CGGCTGGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTaGTTACAGCAGGAGTGGAAAACAAGCCCCATGCTA +
Preference number: 3 (lower is better)
Translates to: RLGGRGRTGVEG*LQQEWKTSPML
Trigger: TAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 72 bp AGGCGGCTCTCCAGGAAAAGGAAGCCCAAGGTGGAGTaGCAAGCCCACTGGTGCCTCAGTGCTCTTGGAAGG +
Preference number: 3 (lower is better)
Translates to: RRLSRKRKPKVE*QAHWCLSALGR
Trigger: CCTTCCAAGAGCACTGAGGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR CCA 72 bp CTCACTCCTGAGCTCTTCTACAAGCCAGCTGCATCCTaGTCCTGCCCCTCAAGGCTTTCCACCTGCTCTCGC +
Preference number: 3 (lower is better)
Translates to: LTPELFYKPAAS*SCPSRLSTCSR
Trigger: GCGAGAGCAGGTGGAAAGCCTTGAGGGGCAGGACCAGGATGCAGCTGGCTTGTAGAAGAGCTCAGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR-3UTR CAA 90 bp ACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACCCGAGGGGCCTGCGCTaGGACTCGGATGTCGAGAGT +
Preference number: 3 (lower is better)
Translates to: TGVEGCLQQEWKTSPMLDPRGLR*DSDVES
Trigger: ACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCGG...GTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR CCA 72 bp GGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTaGAAAACAAGCCCCATGCTAGACCTGACCACAGGG +
Preference number: 3 (lower is better)
Translates to: GRTGVEGCLQQE*KTSPMLDLTTG
Trigger: CCCTGTGGTCAGGTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
3UTR GCA 72 bp ATTTACAGTATCAAACGTCAAATGATGGGGCGCTCCTaGCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGG +
Preference number: 3 (lower is better)
Translates to: IYSIKRQMMGRS*LCPLRSGTACG
Trigger: CCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGCCCCATCATTTGACGTTTGATACTGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
3UTR GCA 72 bp GCTCCCAACTCCCACCTGTGCCCGTGCCCCCGGCTCTaGTCTGATAGATTTACAGTATCAAACTGGAAAAGA +
Preference number: 3 (lower is better)
Translates to: APNSHLCPCPRL*SDRFTVSNWKR
Trigger: TCTTTTCCAGTTTGATACTGTAAATCTATCAGAGCAGAGCCGGGGGCACGGGCACAGGTGGGAGTTGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
3UTR GCA 72 bp GAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTaGAAGATACCAATTCCCACACACAGACACATCCTG +
Preference number: 3 (lower is better)
Translates to: EGLSIICPDSHG*KIPIPTHRHIL
Trigger: CAGGATGTGTCTGTGTGTGGGAATTGGTATCTTGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR TCA 90 bp CCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCAGTCGGTCAGGGCAGTaGGGGGCTCCCGCACCGGCT +
Preference number: 4 (lower is better)
Translates to: PKTGQNRPPAAACPAGPSSRSGQ*GAPAPA
Trigger: AGCCGGTGCGGGAGCCCCTCACTGCCCTGACCGACT...GCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCCCGCGAAGAACAACAAGTaGCCCCGCGCCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AGSPGLRFAPNSHLCPCPAKNNK*PRAARR
Trigger: GCGGCGGGCGGCGCGGGGGCACTTGTTGTTCTTCGC...GGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp GCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCCCTGCAGCCCGTGGCTGTaGTCCTGGGGGTGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: AGSPGLRFAPNSHLCPCPCSPWL*SWGCAR
Trigger: GCGCGCACACCCCCAGGAGCACAGCCACGGGCTGCA...GGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTGCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp GGGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGGGGGCCGGATCCCGTaGGCAGGGGCTTCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: GAGSRGQGLLRCAARPPRGGRIP*AGASAL
Trigger: CAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCCCC...CCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCCC
74% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp ACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGGGGGCCGGATCCCGTaGGCAGGGGCTTCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: TPRRDRTGHPLRPVLRGPGGRIP*AGASAL
Trigger: CAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCCCC...TGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp GCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCCCCTTGCAGGTCTTATGTaGCGGCCCCCGGCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: AGSPGLRFAPNSHLCPCPLAGLM*RPPAGG
Trigger: GCCGCCGGCCGGGGGCCGCCACATAAGACCTGCAAG...GGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTGCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp AGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCGTGCTCCTGGGGGTGTaGGCGCAGGAGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: RRDRTGHPLRPVLRGPAAVLLGV*AQEPRP
Trigger: TGGACGTGGCTCCTGCGCGCACACCCCCAGGAGCAC...GGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp CGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGCACGGCCCTGGCCGCTaGGGCTGTGACATCACCACC +
Preference number: 4 (lower is better)
Translates to: RPPAAACPAGPSCLVQSVHGPGR*GCDITT
Trigger: GGTGGTGATGTCACAGCCGCAGCGGCCAGGGCCGTG...CACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp GGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGCCTGGAACTCGTAGCTaGCGTCGCGCGGAGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GPDPVGRGFCAVLHDLLGPGTRS*RRAEGA
Trigger: CGCGCCCTCCGCGCGACGCCAGCTACGAGTTCCAGG...CCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp GACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTTGGTGGTGGCCACCTTaGAGGGCGCCACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: DGTEPATRCGLSCGAQLPWWWPP*RAPQVP
Trigger: GGGGACCTGTGGCGCCCTCCAAGGTGGCCACCACCA...AGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp GGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGACCGGCGTGCAGCTCTaGGCCCACGGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: GPDPVGRGFCAVLHDLLGTGVQL*AHGSPL
Trigger: GAGTGGGCTCCCGTGGGCCCAGAGCTGCACGCCGGT...CCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp CCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCCAGGGGCCTGACTCCTaGGGCCGTGTCTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PKTGQNRPPAAACPAGPSQGPDS*GRVFRQ
Trigger: CTGCCGGAAGACACGGCCCCAGGAGTCAGGCCCCTG...GCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp CCAGCTCTGGGCGGTGACAGCGGCTCCGTCCACCCTGGGGACCAGGGAGTCCCTTCCCCGGCCCAGCTCTaGGCGGTGACAGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PALGGDSGSVHPGDQGVPSPAQL*AVTAAP
Trigger: CGGAGCCGCTGTCACCGCCCAGAGCTGGGCCGGGGA...AGGGACTCCCTGGTCCCCAGGGTGGACGGAGCCGCTGTCACCGCCCAGAGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR TCA 90 bp GACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGCAAAGGCTCCGGGTaGGGACTGAGTGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DGTEPATRCGLSCGAQLPGKGSG*GLSAEA
Trigger: GGCCTCAGCACTCAGTCCTCACCCGGAGCCTTTGCC...AGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp GCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTCTGCCCAGCTCTGGGCGGTaGCAGCGGCTCCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: ALLPVSAEIRDGLWGRCLPSSGR*QRLRPP
Trigger: GGGTGGACGGAGCCGCTGTCACCGCCCAGAGCTGGG...CAGACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCTCCTCCCCGGGGACTaGGGAGTCGGTCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EPQDGTEPATRCGLSCGALLPGD*GVGQGS
Trigger: ACTGCCCTGACCGACTCCGCAGTCCCCGGGGAGGAG...GGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCCCCCTCTCCCTAGACTaGAGCAGCCCTTCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RRDRTGHPLRPVLRGPAAPLSLD*SSPSPR
Trigger: GCGAGGGGAAGGGCTGCTGCAGTCTAGGGAGAGGGG...GGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCT
72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp CGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGGGGAGATGGGCTGCCGAGTCCGCTaGCCCTGCCAAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RCGLSCGAQLPGTVRGEMGCRVR*PCQGQL
Trigger: CAGCTGGCCTTGGCAGGGGCAGCGGACTCGGCAGCC...CATCTCCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp GGGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGGTGAGACAGGGTCCTaGGCCAGGCTGCCGAGTCCG +
Preference number: 4 (lower is better)
Translates to: GAGSRGQGLLRCAARPPRGETGS*ARLPSP
Trigger: CGGACTCGGCAGCCTGGCGCAGGACCCTGTCTCACC...CCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp GACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGGGCTGTTACTGGGTaGGCAGGGGCAGCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: DGTEPATRCGLSCGAQLPGAVTG*AGAAEK
Trigger: CTTCTCGGCTGCCCCTGCCCACCCAGTAACAGCCCC...AGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp GACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTAGCTTCTCCACCTCCTaGTGCAGCTCCACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: DGTEPATRCGLSCGAQLPSFSTS*CSSTRC
Trigger: GCAGCGCGTGGAGCTGCAGCAGGAGGTGGAGAAGCT...AGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp CGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGGGGAGATGGTCTGTGGACCGGCGTaGAGCTCTGGGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: RCGLSCGAQLPGTVRGEMVCGPA*SSGPTG
Trigger: TCCCGTGGGCCCAGAGCTGCACGCCGGTCCACAGAC...CATCTCCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp CGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGTCTCTCTGCCATGTGTaGCCACAGGCCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RPPAAACPAGPSCLVQSVSLCHV*PQALPQ
Trigger: CTGGGGGAGGGCCTGTGGGCACACATGGCAGAGAGA...CACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp CGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGGCTTCTGCGCTGTGCTaGACGACCTCCTCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: RPPAAACPAGPSCLVQSVASALC*TTSSGH
Trigger: GTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGC...CACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp CGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGCGCTGCGGCCTGTCCTaGGGGGCCCAGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RGHQEPQDGTEPATRCGLRCGLS*GAQLPG
Trigger: ACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCG...CAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp GATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGTCACCAGGCTCCCGCACCGGCTaGGAGGCCGTGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: DPVGRGFCAVLHDLLGSPGSRTG*EAVAGQ
Trigger: CTGTCCTGCCACGGCCTCCCAGCCGGTGCGGGAGCC...TGGTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp CGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGGGGAGATGGGGACCCAGTGGTCCTaGCGGGCCTGCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RCGLSCGAQLPGTVRGEMGTQWS*RACSFP
Trigger: TGGGAAGCTGCAGGCCCGCCAGGACCACTGGGTCCC...CATCTCCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp CCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCGCCTGGTACAGTCCGTaGGGAGATGAAGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: PKTGQNRPPAAACPAGPSAWYSP*GDEGGR
Trigger: CCGTCCCCCTTCATCTCCCCACGGACTGTACCAGGC...GCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp CCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGGACATGGGCATCATaGGGGCGGGTGACCGCATCC +
Preference number: 4 (lower is better)
Translates to: PKTGQNRPPAAACPAGPSWTWAS*GRVTAS
Trigger: GGATGCGGTCACCCGCCCCCATGATGCCCATGTCCA...GCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp ACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCATTGCCATGGCGACCTTaGGACCGAGCCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TPRRDRTGHPLRPVLRGPLPWRP*DRASPH
Trigger: GTGGGGGCTGGCTCGGTCCCAAGGTCGCCATGGCAA...TGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR TCA 90 bp GGGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGTCAGCCCTGCTGCTTTaGTGGCAGGCGTGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: GAGSRGQGLLRCAARPPRSALLL*WQACVH
Trigger: GTGCACGCACGCCTGCCATCAAAGCAGCAGGGCTGA...CCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR TCA 90 bp GAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCTGGCCGCTGCGGCTGTaGCATCACCACCTCCACCTA +
Preference number: 4 (lower is better)
Translates to: EPQDGTEPATRCGLSCGAWPLRL*HHHLHL
Trigger: TAGGTGGAGGTGGTGATGTCACAGCCGCAGCGGCCA...GGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp CCAGCTCTGGGCGGTGACAGCGGCTCCGTCCACCCTGGGGACCAGGGAGTCCCTAGTGTGCGCCGACGCTaGTTCAGGCGGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: PALGGDSGSVHPGDQGVPSVRRR*FRRVTS
Trigger: GGAGGTGACCCGCCTGAAGCAGCGTCGGCGCACACT...AGGGACTCCCTGGTCCCCAGGGTGGACGGAGCCGCTGTCACCGCCCAGAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GGCCCAGCTGCCTGGTACAGTCCGTGGGGAGATGAAGGGGGACGGCGGGCAGCCTTCTCCACCTCCTGCTaGAGCTCCACGCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GPAAWYSPWGDEGGRRAAFSTSC*SSTRCR
Trigger: GCGGCAGCGCGTGGAGCTGCAGCAGGAGGTGGAGAA...GGCTGCCCGCCGTCCCCCTTCATCTCCCCACGGACTGTACCAGGCAGCTGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCGATGGCAGGCGTGCGTaGACACACACAGACACCACC +
Preference number: 4 (lower is better)
Translates to: RRDRTGHPLRPVLRGPAADGRRA*THTDTT
Trigger: GGTGGTGTCTGTGTGTGTGCACGCACGCCTGCCATC...GGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp CCAGCTCTGGGCGGTGACAGCGGCTCCGTCCACCCTGGGGACCAGGGAGTCCCTGTGGGCAGGGGCTTCTaGGCTGTGCTGCACGACCTC +
Preference number: 4 (lower is better)
Translates to: PALGGDSGSVHPGDQGVPVGRGF*AVLHDL
Trigger: GAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCAC...AGGGACTCCCTGGTCCCCAGGGTGGACGGAGCCGCTGTCACCGCCCAGAGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCAAGCAGAACACACCGTaGTTCCCCGGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RRDRTGHPLRPVLRGPAAKQNTP*FPGPAL
Trigger: CAGAGCTGGGCCGGGGAAGCACGGTGTGTTCTGCTT...GGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GCGCTGTGCTGCACGACCTCCTCGGGTCACCAGAGCACAGGGGAGACCTCACGAAGGCTGGGGCCCAGCTaGCTCCGCCACCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ALCCTTSSGHQSTGETSRRLGPS*LRHRGD
Trigger: GTCCCCACGGTGGCGGAGGCAGCTGGGCCCCAGCCT...TCGTGAGGTCTCCCCTGTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp AGTGTGTCTGTGGACCGGCGTGCAGCTCTGGGCCCACGGGAGCCCACTCTTCACGGTCCTGCGCCAGGCTaGCGAGTCCGCTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SVSVDRRAALGPREPTLHGPAPG*RVRCPC
Trigger: GCAGGGGCAGCGGACTCGGCAGCCTGGCGCAGGACC...GTGAAGAGTGGGCTCCCGTGGGCCCAGAGCTGCACGCCGGTCCACAGACACACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp CGGGACAGCTGGAAGGACGGAGCTGCCGACACACCATCCATGCTCCTCCCCGGGTCCACCCTCCAGCCCTaGCTCCGATGGGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RDSWKDGAADTPSMLLPGSTLQP*LRWGPH
Trigger: GTGGGGCCCCCATCGGAGGCAGGGCTGGAGGGTGGA...CCCGGGGAGGAGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp CAGGCACCACCTTGCAGGTCTTATGTGGCGGCCCCCGGCCGGCGGCTCACATTCCCGTGGCTGTGCTCCTaGGGGTGTGCGCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QAPPCRSYVAAPGRRLTFPWLCS*GCARRS
Trigger: GCTCCTGCGCGCACACCCCCAGGAGCACAGCCACGG...GAATGTGAGCCGCCGGCCGGGGGCCGCCACATAAGACCTGCAAGGTGGTGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp GCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTCTGCCAGCTCATCATCGCTaGGCACCGGGGCGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: ALLPVSAEIRDGLWGRCLPAHHR*APGRSR
Trigger: GCGAGAACGCCCCGGTGCTCAGCGATGATGAGCTGG...CAGACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp CGGGACAGCTGGAAGGACGGAGCTGCCGACACACCATCCATGCTCCTCCCCGGGTGCGCCCGAGGGGCCTaGGCTTGGACTCGGATGTCG +
Preference number: 4 (lower is better)
Translates to: RDSWKDGAADTPSMLLPGCARGA*AWTRMS
Trigger: CGACATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCA...CCCGGGGAGGAGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTCTGCCCCCTCAGCCCTGCTaGTTTGATGGCAGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: ALLPVSAEIRDGLWGRCLPPQPC*FDGRRA
Trigger: CGCACGCCTGCCATCAAAGCAGCAGGGCTGAGGGGG...CAGACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp GCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTCTGGTAGATGGCACAGGATaGCACCAGCCGGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: ALLPVSAEIRDGLWGRCLVDGTG*HQPVPG
Trigger: CCCCGGGACCGGCTGGTGCCATCCTGTGCCATCTAC...CAGACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR TCA 90 bp AGGCAGACGCGGATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCCCTGCCTGTGTCCGCTaGGATCCGGGACGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: RQTRITGTATGQLEGRSCPACVR*DPGRPV
Trigger: CACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGG...GCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGCGTCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTCTGCCAGCTCCAGCCGCATaGTGCTGTTCTCACGCGCCA +
Preference number: 4 (lower is better)
Translates to: ALLPVSAEIRDGLWGRCLPAPAA*CCSHAP
Trigger: TGGCGCGTGAGAACAGCAGCATGCGGCTGGAGCTGG...CAGACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GCGCTGTGCTGCACGACCTCCTCGGGTCACCAGAGCACAGGGGAGACCTCACGACTTCCTGGTGTGAGCTaGCTGCGCCCGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ALCCTTSSGHQSTGETSRLPGVS*LRPRGL
Trigger: CAGGCCCCTCGGGCGCAGGCAGCTCACACCAGGAAG...TCGTGAGGTCTCCCCTGTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTCCCGACTCCCACGGGTaGAAGATACCAATTCCCACA +
Preference number: 4 (lower is better)
Translates to: DGTEPATRCGLSCGAQLPPDSHG*KIPIPT
Trigger: TGTGGGAATTGGTATCTTGCACCCGTGGGAGTCGGG...AGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp CAGGCACCACCTTGCAGGTCTTATGTGGCGGCCCCCGGCCGGCGGCTCACATTCTCCCACCTGTGCCCGTaGCCCCGGCTCTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QAPPCRSYVAAPGRRLTFSHLCP*PRLCSD
Trigger: ATCAGAGCAGAGCCGGGGGCACGGGCACAGGTGGGA...GAATGTGAGCCGCCGGCCGGGGGCCGCCACATAAGACCTGCAAGGTGGTGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp ACCGGCTGGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTCCCAACTCCCACCTGTaGCCGTGCCCCCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TGWEAVAGQVSKAAYSRSPNSHL*PCPRLC
Trigger: GCAGAGCCGGGGGCACGGGCACAGGTGGGAGTTGGG...ACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTTGGTGGTGGCCACCTTaGAGGGCGCCACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPWWWPP*RAPQVP
Trigger: GGGGACCTGTGGCGCCCTCCAAGGTGGCCACCACCA...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTCCGGCTGGGAGGCCGTaGCAGGACAGGTGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPPAGRP*QDRCRR
Trigger: CCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGG...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp GCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTCTGCTGCAACGGGACAGCTaGAAGGACGGAGCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: ALLPVSAEIRDGLWGRCLLQRDS*KDGAAD
Trigger: GTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAG...CAGACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp ACCGGCTGGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTTGTGGGGTCGGTGTCTaGGGGGCCGGATCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: TGWEAVAGQVSKAAYSRSCGVGV*GAGSRG
Trigger: CCCACGGGATCCGGCCCCCCAGACACCGACCCCACA...ACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp GCGCTGTGCTGCACGACCTCCTCGGGTCACCAGAGCACAGGGGAGACCTCACGAACCCGCCGCGCCCTCTaGAGTGCCAGGCTCACTCCT +
Preference number: 4 (lower is better)
Translates to: ALCCTTSSGHQSTGETSRTRRAL*SARLTP
Trigger: AGGAGTGAGCCTGGCACTCCAGAGGGCGCGGCGGGT...TCGTGAGGTCTCCCCTGTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp AAGGAGCCAGGGCCCCAGGCACCACCTTGCAGGTCTTATGTGGCGGCCCCCGGCGCCTGGTACAGTCCGTaGGGAGATGAAGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: KEPGPQAPPCRSYVAAPGAWYSP*GDEGGR
Trigger: CCGTCCCCCTTCATCTCCCCACGGACTGTACCAGGC...GCCGGGGGCCGCCACATAAGACCTGCAAGGTGGTGCCTGGGGCCCTGGCTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTCGGCTCCGTCCACCCTaGGGACCAGGGAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPRLRPP*GPGSPF
Trigger: GAAGGGACTCCCTGGTCCCCAGGGTGGACGGAGCCG...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp GAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCAGACCTGGATCTCTTTaGGAAGCCGGAGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: EPQDGTEPATRCGLSCGARPGSL*EAGGTE
Trigger: CTCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCT...GGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp CGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGGGGAGATGGGTCAGCACCTCCACTaGACATGGGCATCATGGGGG +
Preference number: 4 (lower is better)
Translates to: RCGLSCGAQLPGTVRGEMGQHLH*TWASWG
Trigger: CCCCCATGATGCCCATGTCCAGTGGAGGTGCTGACC...CATCTCCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp ATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCCGACACACCATCCAGAGACCAGGGAGGTaGGGGAGCCGCCGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ITGTATGQLEGRSCRHTIQRPGR*GSRRPA
Trigger: GGCAGGGCGGCGGCTCCCCCACCTCCCTGGTCTCTG...GATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR TCA 90 bp GCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCCCCGCCCGCCTCCTTCTTaGCCTTTAATGCCTTATTCG +
Preference number: 4 (lower is better)
Translates to: AGSPGLRFAPNSHLCPCPRPPPS*PLMPYS
Trigger: CGAATAAGGCATTAAAGGTCAAGAAGGAGGCGGGCG...GGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTGCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR TCA 90 bp GTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGTCACCAGAGCACCCTGCCAAGGCCAGCTaGTCTCAGGGCGCTGACGTA +
Preference number: 4 (lower is better)
Translates to: VGRGFCAVLHDLLGSPEHPAKAS*SQGADV
Trigger: TACGTCAGCGCCCTGAGATCAGCTGGCCTTGGCAGG...GTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp GCGCTGTGCTGCACGACCTCCTCGGGTCACCAGAGCACAGGGGAGACCTCACGATGCAGCTCCACGCGCTaGCGCTCCAGCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ALCCTTSSGHQSTGETSRCSSTR*RSSSSF
Trigger: GAAGGAGGAGCTGGAGCGGCAGCGCGTGGAGCTGCA...TCGTGAGGTCTCCCCTGTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AGGCAGACGCGGATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCTTCTCCACCTCCTGCTaGAGCTCCACGCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQTRITGTATGQLEGRSCFSTSC*SSTRCR
Trigger: GCGGCAGCGCGTGGAGCTGCAGCAGGAGGTGGAGAA...GCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGCGTCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp CAGGCACCACCTTGCAGGTCTTATGTGGCGGCCCCCGGCCGGCGGCTCACATTCAGCTTCTCCACCTCCTaGTGCAGCTCCACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QAPPCRSYVAAPGRRLTFSFSTS*CSSTRC
Trigger: GCAGCGCGTGGAGCTGCAGCAGGAGGTGGAGAAGCT...GAATGTGAGCCGCCGGCCGGGGGCCGCCACATAAGACCTGCAAGGTGGTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTCGGCCGGCACTAGGATaGAGCCGAGAAGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPRPALG*SREGHG
Trigger: TCCGTGCCCTTCTCGGCTGCATCCTAGTGCCGGCCG...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AGTGTGTCTGTGGACCGGCGTGCAGCTCTGGGCCCACGGGAGCCCACTCTTCACCCGACACACCATCCATaGTCCTCCCCGGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: SVSVDRRAALGPREPTLHPTHHP*SSPGTA
Trigger: CGCAGTCCCCGGGGAGGAGCATGGATGGTGTGTCGG...GTGAAGAGTGGGCTCCCGTGGGCCCAGAGCTGCACGCCGGTCCACAGACACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACCACCTTGCAGGTCTTATGTGGCGGCCCCCGGCCGGCGGCTCACATTCCGCCAGCTTCTGCGCTGTGCTaGACGACCTCCTCGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TTLQVLCGGPRPAAHIPPASALC*TTSSGH
Trigger: GTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGC...TGGCGGAATGTGAGCCGCCGGCCGGGGGCCGCCACATAAGACCTGCAAGGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp GCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGTCCTGGACTGGTGCCTaGTGCCTCCCCACCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AGRSPRPTRRGHQEPQDGSWTGA*CLPTRR
Trigger: GCGGCGGGTGGGGAGGCAGCAGGCACCAGTCCAGGA...CCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp CGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGCCCCAGGCACCACCTTaGAGGTCTTATGTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RGHQEPQDGTEPATRCGLPQAPP*RSYVAA
Trigger: GGCCGCCACATAAGACCTGCAAGGTGGTGCCTGGGG...CAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp AGTGTGTCTGTGGACCGGCGTGCAGCTCTGGGCCCACGGGAGCCCACTCTTCACCCCGGGCCTCCGCTTTaGTCCCAACTCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SVSVDRRAALGPREPTLHPGPPL*SQLPPV
Trigger: CACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGG...GTGAAGAGTGGGCTCCCGTGGGCCCAGAGCTGCACGCCGGTCCACAGACACACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp CACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCCTGCGGGGCCCAGCTaGCTGGTACAGTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: HKTWTPRTPRRDRTGHPLPAGPS*LVQSVG
Trigger: CCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGG...CAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GGGGCCTGCGCTTGGACTCGGATGTCGAGAGTCTGCATCCCAGTGACAGGTACGCCTGCGGGGCCCAGCTaGCTGGTACAGTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GACAWTRMSRVCIPVTGTPAGPS*LVQSVG
Trigger: CCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGG...CGTACCTGTCACTGGGATGCAGACTCTCGACATCCGAGTCCAAGCGCAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp CCGGCAGCCCCCACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTGGCTCCCGCACCGGCTaGGAGGCCGTGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: PAAPTEDAELPEGLSIICGSRTG*EAVAGQ
Trigger: CTGTCCTGCCACGGCCTCCCAGCCGGTGCGGGAGCC...ACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGTGGGGGCTGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp GCGCTGTGCTGCACGACCTCCTCGGGTCACCAGAGCACAGGGGAGACCTCACGACGGGGCCCAGCTGCCTaGTACAGTCCGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: ALCCTTSSGHQSTGETSRRGPAA*YSPWGD
Trigger: ATCTCCCCACGGACTGTACCAGGCAGCTGGGCCCCG...TCGTGAGGTCTCCCCTGTGCTCTGGTGACCCGAGGAGGTCGTGCAGCACAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp AGGCAGACGCGGATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCAGCAGCACACGGCGGTaGGGGGTGTCCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RQTRITGTATGQLEGRSCSSTRR*GVSLVS
Trigger: GCTGACCAAGGACACCCCCCACCGCCGTGTGCTGCT...GCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGCGTCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp GAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCCCCCACGGTTGTCATaGAAACCGAGAAGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: EPQDGTEPATRCGLSCGAPPRLS*KPRSPN
Trigger: GTTTGGGCTTCTCGGTTTCCATGACAACCGTGGGGG...GGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000403150.5
3UTR CAA 72 bp CCTGGTGTGAGCTGCCTGCGCCCGAGGGGCCTGCGCTaGGACTCGGATGTCGAGAGTCTGCATCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PGVSCLRPRGLR*DSDVESLHPSD
Trigger: GTCACTGGGATGCAGACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCAGGCAGCTCACACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR TCA 90 bp GGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGCGCCCGCCTCCTTCTTaGCCTTTAATGCCTTATTCG +
Preference number: 4 (lower is better)
Translates to: GPDPVGRGFCAVLHDLLGRPPPS*PLMPYS
Trigger: CGAATAAGGCATTAAAGGTCAAGAAGGAGGCGGGCG...CCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR TCA 90 bp AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCCTGCCTGTGTCCGCTaGGATCCGGGACGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KHCRPRAGRSPRPTRRGHPACVR*DPGRPV
Trigger: CACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGG...GTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTCCAGCTCCAGCCGCATaGTGCTGTTCTCACGCGCCA +
Preference number: 4 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPPAPAA*CCSHAP
Trigger: TGGCGCGTGAGAACAGCAGCATGCGGCTGGAGCTGG...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACTGCGCCCGAGGGGCCTaGGCTTGGACTCGGATGTCG +
Preference number: 4 (lower is better)
Translates to: KHCRPRAGRSPRPTRRGHCARGA*AWTRMS
Trigger: CGACATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCA...GTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GGGGCCTGCGCTTGGACTCGGATGTCGAGAGTCTGCATCCCAGTGACAGGTACGCTCCTCCCCGGGGACTaGGGAGTCGGTCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GACAWTRMSRVCIPVTGTLLPGD*GVGQGS
Trigger: ACTGCCCTGACCGACTCCGCAGTCCCCGGGGAGGAG...CGTACCTGTCACTGGGATGCAGACTCTCGACATCCGAGTCCAAGCGCAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GGGGCCTGCGCTTGGACTCGGATGTCGAGAGTCTGCATCCCAGTGACAGGTACGCGACCTCCCACACCGTaGCCACTCACGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GACAWTRMSRVCIPVTGTRPPTP*PLTQAP
Trigger: AGGGGCCTGCGTGAGTGGGCACGGTGTGGGAGGTCG...CGTACCTGTCACTGGGATGCAGACTCTCGACATCCGAGTCCAAGCGCAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCCGACACACCATCCGACCTCCCACACCGTaGCCACTCACGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ITGTATGQLEGRSCRHTIRPPTP*PLTQAP
Trigger: AGGGGCCTGCGTGAGTGGGCACGGTGTGGGAGGTCG...GATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTTCTCTCTGCCATGTGTaGCCACAGGCCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPSLCHV*PQALPQ
Trigger: CTGGGGGAGGGCCTGTGGGCACACATGGCAGAGAGA...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GGATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCCGACACACCAGGGGCTTCTGCGCTGTaGTGCACGACCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: GSRALQRDSWKDGAADTPGASAL*CTTSSG
Trigger: ACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCC...TGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTGCACGCTGCGGCCTGTCCTaGGGGGCCCAGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TRNFPRAFPLYVPTPTGARCGLS*GAQLPG
Trigger: ACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCG...TGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTGCACCCGAGCGAGGACCCTaGGGCCCAAGGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TRNFPRAFPLYVPTPTGAPERGP*GPRGCG
Trigger: CCCACACCCCCTTGGGCCGCAGGGTCCTCGCTCGGG...TGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp AGTGTGTCTGTGGACCGGCGTGCAGCTCTGGGCCCACGGGAGCCCACTCTTCACCGAGGGGCCTGCGCTTaGACTCGGATGTCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: SVSVDRRAALGPREPTLHRGACA*TRMSRV
Trigger: GACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCG...GTGAAGAGTGGGCTCCCGTGGGCCCAGAGCTGCACGCCGGTCCACAGACACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp TGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAAACCGGCGTGCAGCTCTaGGCCCACGGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: CRPRAGRSPRPTRRGHQETGVQL*AHGSPL
Trigger: GAGTGGGCTCCCGTGGGCCCAGAGCTGCACGCCGGT...TTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCCGGCTGGGAGGCCGTaGCAGGACAGGTGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: KHCRPRAGRSPRPTRRGHPAGRP*QDRCRR
Trigger: CCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGG...GTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp CGGGACAGCTGGAAGGACGGAGCTGCCGACACACCATCCATGCTCCTCCCCGGGTCCACGAAGCTCTCCTaGACTGGTGCCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RDSWKDGAADTPSMLLPGSTKLS*TGACCL
Trigger: GAGGCAGCAGGCACCAGTCCAGGAGAGCTTCGTGGA...CCCGGGGAGGAGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp GCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGGCTCCGGGTGAGGACTaGGTGCTGAGGCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: AGRSPRPTRRGHQEPQDGAPGED*VLRPAT
Trigger: TGTGGCTGGCCTCAGCACTCAGTCCTCACCCGGAGC...CCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp AGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCAGCTCTGGGCGGTaGCAGCGGCTCCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: RPWQDRCRRLLTAGVENKPSSGR*QRLRPP
Trigger: GGGTGGACGGAGCCGCTGTCACCGCCCAGAGCTGGG...CTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR TCA 90 bp ATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCCGACACACCATCGCCCTGCCGAGCATTTaGCCGTCTGGCGGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: ITGTATGQLEGRSCRHTIALPSI*PSGGSR
Trigger: ACGACTCCCGCCAGACGGTCAAATGCTCGGCAGGGC...GATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp GGGGCCTGCGCTTGGACTCGGATGTCGAGAGTCTGCATCCCAGTGACAGGTACGAGTGTGCGCCGACGCTaGTTCAGGCGGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: GACAWTRMSRVCIPVTGTSVRRR*FRRVTS
Trigger: GGAGGTGACCCGCCTGAAGCAGCGTCGGCGCACACT...CGTACCTGTCACTGGGATGCAGACTCTCGACATCCGAGTCCAAGCGCAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGCGGCCGGCACTAGGATaGAGCCGAGAAGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: AGRSPRPTRRGHQEPQDGRPALG*SREGHG
Trigger: TCCGTGCCCTTCTCGGCTGCATCCTAGTGCCGGCCG...CCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GTGTCTTCCGGCAGCCCCCACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATGCACCCCCTCAGCCCTaGTGCTTTGATGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: VSSGSPHRGRGTSRGPFHAPPQP*CFDGRR
Trigger: ACGCCTGCCATCAAAGCAGCAGGGCTGAGGGGGTGC...ATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGTGGGGGCTGCCGGAAGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTATGATGGGGCGCTCCTaGCTGTGTCCGCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPMMGRS*LCPLRS
Trigger: GGATCTCAGCGGACACAGGCAGGAGCGCCCCATCAT...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GGGGCCGGATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGCGCCGTCCTCACGTCTaGATTGTGTCACACATTCTA +
Preference number: 4 (lower is better)
Translates to: GAGSRGQGLLRCAARPPRRRPHV*IVSHIL
Trigger: TAGAATGTGTGACACAATGCAGACGTGAGGACGGCG...CCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATCCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp GGGGCCTGCGCTTGGACTCGGATGTCGAGAGTCTGCATCCCAGTGACAGGTACGCACCTCCACCTAAGCTaGCCCCGAGCGAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GACAWTRMSRVCIPVTGTHLHLS*PRARTL
Trigger: CAGGGTCCTCGCTCGGGGGCAGCTTAGGTGGAGGTG...CGTACCTGTCACTGGGATGCAGACTCTCGACATCCGAGTCCAAGCGCAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp AATGATGGGGCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTGGGGTCCCCACGCCCTaGAAACGCAAAGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: NDGALLPVSAEIRDGLWGGVPTP*KRKDLD
Trigger: ATCCAGGTCTTTGCGTTTCCAGGGCGTGGGGACCCC...ACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGCCCCATCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp ACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGAAAACAAACCCACGTaGCAAAGAGTCCCTCGTCTT +
Preference number: 4 (lower is better)
Translates to: TPRRDRTGHPLRPVLRGPENKPT*QRVPRL
Trigger: AAGACGAGGGACTCTTTGTCACGTGGGTTTGTTTTC...TGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp CGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCAGAGGGCCGCACAGGTaGGACAGGGTCCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: RGRTGVEGCLQQEWKTSPRGPHR*DRVLRQ
Trigger: CTGGCGCAGGACCCTGTCTCACCTGTGCGGCCCTCT...GGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR TCA 90 bp CGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCCATCATGGGGGCGGGTaGCCGCATCCCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RGRTGVEGCLQQEWKTSPHHGGG*PHPVLP
Trigger: AGGGAGGACGGGATGCGGTCACCCGCCCCCATGATG...GGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp GCTCTCCAGGAAAAGGAAGCCCAAGGTGGAGTGCCAAGCCCACTGGTGCCTCAGTGCAGCTCCACGCGCTaGCGCTCCAGCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ALQEKEAQGGVPSPLVPQCSSTR*RSSSSF
Trigger: GAAGGAGGAGCTGGAGCGGCAGCGCGTGGAGCTGCA...CTGAGGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp GACCCAGTGGTCCTGGCGGGCCTGCAGCTTCCCACTCAACTTCTAACAGTAGACCTTCCTGGTGTGAGCTaGCTGCGCCCGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DPVVLAGLQLPTQLLTVDLPGVS*LRPRGL
Trigger: CAGGCCCCTCGGGCGCAGGCAGCTCACACCAGGAAG...GTCTACTGTTAGAAGTTGAGTGGGAAGCTGCAGGCCCGCCAGGACCACTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp AGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGGACGGGGCAGGGGATGGCAGGCGTGCGTaGACACACACAGACACCACC +
Preference number: 4 (lower is better)
Translates to: SSRTHGNKLGGGRRDGAGDGRRA*THTDTT
Trigger: GGTGGTGTCTGTGTGTGTGCACGCACGCCTGCCATC...CCCTGCCCCGTCCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp ACCGGCTGGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTAAGCCCAAGGTGGAGTaGCAAGCCCACTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TGWEAVAGQVSKAAYSRSKPKVE*QAHWCL
Trigger: GAGGCACCAGTGGGCTTGGCACTCCACCTTGGGCTT...ACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp CCGGCAGCCCCCACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTTCCCACCTGTGCCCGTaGCCCCGGCTCTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PAAPTEDAELPEGLSIICSHLCP*PRLCSD
Trigger: ATCAGAGCAGAGCCGGGGGCACGGGCACAGGTGGGA...ACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGTGGGGGCTGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCGAGTCCGCTGCCCCTaGCAAGGCCAGCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: KHCRPRAGRSPRPTRRGHRVRCP*QGQLIS
Trigger: TGAGATCAGCTGGCCTTGGCAGGGGCAGCGGACTCG...GTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp CACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGAGGGGCCTGCGCTTaGACTCGGATGTCGAGAGTC +
Preference number: 4 (lower is better)
Translates to: HKTWTPRTPRRDRTGHPLRGACA*TRMSRV
Trigger: GACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCG...CAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp ACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTGCACAGGGGCCTGACTCCTaGGGCCGTGTCTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TRNFPRAFPLYVPTPTGAQGPDS*GRVFRQ
Trigger: CTGCCGGAAGACACGGCCCCAGGAGTCAGGCCCCTG...TGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp CACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCTGCAACGGGACAGCTaGAAGGACGGAGCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: HKTWTPRTPRRDRTGHPLLQRDS*KDGAAD
Trigger: GTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAG...CAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp GGGGCCTGCGCTTGGACTCGGATGTCGAGAGTCTGCATCCCAGTGACAGGTACGGGGCTCTGTAGCTGGTaGGGGCTGTTACTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GACAWTRMSRVCIPVTGTGLCSW*GLLLGG
Trigger: CCCACCCAGTAACAGCCCCCACCAGCTACAGAGCCC...CGTACCTGTCACTGGGATGCAGACTCTCGACATCCGAGTCCAAGCGCAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp ACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACTCTGCCCTCCCAGCGTaGCTGGCACCCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TEDAELPEGLSIICPDSHSALPA*LAPAWA
Trigger: AGCCCAGGCGGGTGCCAGCCACGCTGGGAGGGCAGA...GTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp ACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTGCACGGCTCCGTCCACCCTaGGGACCAGGGAGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TRNFPRAFPLYVPTPTGARLRPP*GPGSPF
Trigger: GAAGGGACTCCCTGGTCCCCAGGGTGGACGGAGCCG...TGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp ACTCCCACGGGTGCAAGATACCAATTCCCACACACAGACACATCCTGCGGGGAGCAGGGTGAGGCGGTGTaGCGGCGTGGCGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: TPTGARYQFPHTDTSCGEQGEAV*RRGGIG
Trigger: CCCTATGCCGCCACGCCGCCACACCGCCTCACCCTG...CTCCCCGCAGGATGTGTCTGTGTGTGGGAATTGGTATCTTGCACCCGTGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp CCCACCCGCCGCGCCCTCTGGAGTGCCAGGCTCACTCCTGAGCTCTTCTACAAGCCCGACTCCCACGGGTaGAAGATACCAATTCCCACA +
Preference number: 4 (lower is better)
Translates to: PTRRALWSARLTPELFYKPDSHG*KIPIPT
Trigger: TGTGGGAATTGGTATCTTGCACCCGTGGGAGTCGGG...CTTGTAGAAGAGCTCAGGAGTGAGCCTGGCACTCCAGAGGGCGCGGCGGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACATGATGGGGCGCTCCTaGCTGTGTCCGCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: KHCRPRAGRSPRPTRRGHMMGRS*LCPLRS
Trigger: GGATCTCAGCGGACACAGGCAGGAGCGCCCCATCAT...GTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GGAGCTGCCGACACACCATCCATGCTCCTCCCCGGGGACTGCGGAGTCGGTCAGACACAGCCTGAGTCCTaGTCACCGTCAAATGATGGG +
Preference number: 4 (lower is better)
Translates to: GAADTPSMLLPGDCGVGQTQPES*SPSNDG
Trigger: CCCATCATTTGACGGTGAGCAGGACTCAGGCTGTGT...CTGACCGACTCCGCAGTCCCCGGGGAGGAGCATGGATGGTGTGTCGGCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp CACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGGAGCCCTCCGATAGTTaGCATGGCGACCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: HKTWTPRTPRRDRTGHPLEPSDS*HGDLGT
Trigger: GGTCCCAAGGTCGCCATGGCAACTATCGGAGGGCTC...CAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp GACCCAGTGGTCCTGGCGGGCCTGCAGCTTCCCACTCAACTTCTAACAGTAGACCACACCTGCAGCCCGTaGCTGTGCTCCTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: DPVVLAGLQLPTQLLTVDHTCSP*LCSWGC
Trigger: ACACCCCCAGGAGCACAGCCACGGGCTGCAGGTGTG...GTCTACTGTTAGAAGTTGAGTGGGAAGCTGCAGGCCCGCCAGGACCACTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp AGGCAGACGCGGATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCACGGCCCACAAGACGTaGACACCAAGAACCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RQTRITGTATGQLEGRSCTAHKT*TPRTPR
Trigger: TCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGT...GCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGCGTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp AAGACCTGGATCTCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACTCCCCGGCCCAGCTCTaGGCGGTGACAGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: KTWISLGSRRHGDRKQTHSPAQL*AVTAAP
Trigger: CGGAGCCGCTGTCACCGCCCAGAGCTGGGCCGGGGA...GTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp ACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTGCAGAGCATTTGACCGTCTaGCGGGAGTCGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: TRNFPRAFPLYVPTPTGAEHLTV*RESSPP
Trigger: CGGCGGGGACGACTCCCGCCAGACGGTCAAATGCTC...TGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR TCA 90 bp ATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCCGACACACCATCAGACCTCACGACGTGTaGGCCACTCTCTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: ITGTATGQLEGRSCRHTIRPHDV*ATLSAM
Trigger: CATGGCAGAGAGAGTGGCTCACACGTCGTGAGGTCT...GATGGTGTGTCGGCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AGGCAGACGCGGATCACGGGCACTGCAACGGGACAGCTGGAAGGACGGAGCTGCGCCCACTCTTCACCCTaGAATACAGTCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RQTRITGTATGQLEGRSCAHSSP*NTVSSW
Trigger: CCAGGAAGAGACTGTATTGCAGGGTGAAGAGTGGGC...GCAGCTCCGTCCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGCGTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GGAGCTGCCGACACACCATCCATGCTCCTCCCCGGGGACTGCGGAGTCGGTCAGACAGGTGTCGAAGGCTaGTTACAGCAGGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GAADTPSMLLPGDCGVGQTGVEG*LQQEWK
Trigger: TTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT...CTGACCGACTCCGCAGTCCCCGGGGAGGAGCATGGATGGTGTGTCGGCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGCTGGAAGGACGGAGCTaGCGACACACCATCCATGCT +
Preference number: 4 (lower is better)
Translates to: AGRSPRPTRRGHQEPQDGLEGRS*RHTIHA
Trigger: AGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAG...CCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTGCAGCGGATCACGGGCACTaGAACGGGACAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TRNFPRAFPLYVPTPTGAADHGH*NGTAGR
Trigger: CCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGC...TGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GACCCAGTGGTCCTGGCGGGCCTGCAGCTTCCCACTCAACTTCTAACAGTAGACGCACCCCCTCAGCCCTaGTGCTTTGATGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: DPVVLAGLQLPTQLLTVDAPPQP*CFDGRR
Trigger: ACGCCTGCCATCAAAGCAGCAGGGCTGAGGGGGTGC...GTCTACTGTTAGAAGTTGAGTGGGAAGCTGCAGGCCCGCCAGGACCACTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp GCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGCCACTGGTGCCTCAGTaGTCTTGGAAGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AGRSPRPTRRGHQEPQDGPLVPQ*SWKEEQ
Trigger: CTGCTCCTCCTTCCAAGAGCACTGAGGCACCAGTGG...CCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp TGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAATGGTCCTGGCGGGCCTaGAGCTTCCCACTCAACTTC +
Preference number: 4 (lower is better)
Translates to: CRPRAGRSPRPTRRGHQEWSWRA*SFPLNF
Trigger: GAAGTTGAGTGGGAAGCTGCAGGCCCGCCAGGACCA...TTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp TCCTCGGGTCACCAGAGCACAGGGGAGACCTCACGACGTGTGAGCCACTCTCTCGAACACGCAGGCCTTTaGTCTGTAGGGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSGHQSTGETSRRVSHSLEHAGL*SVGTQW
Trigger: CCACTGGGTCCCTACAGAGCAAAGGCCTGCGTGTTC...GAGAGAGTGGCTCACACGTCGTGAGGTCTCCCCTGTGCTCTGGTGACCCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp ACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACCCCAACTCCCACCTGTaGCCGTGCCCCCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TGVEGCLQQEWKTSPMLDPNSHL*PCPRLC
Trigger: GCAGAGCCGGGGGCACGGGCACAGGTGGGAGTTGGG...GTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCGGGCCTCCGCTTTaGTCCCAACTCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: RPWQDRCRRLLTAGVENKPGPPL*SQLPPV
Trigger: CACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGG...CTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTGCAGTCAACAAACCCATTTaGACCCGGCGGCCGGGACGG +
Preference number: 4 (lower is better)
Translates to: TRNFPRAFPLYVPTPTGAVNKPI*TRRPGR
Trigger: CCGTCCCGGCCGCCGGGTGCAAATGGGTTTGTTGAC...TGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp ACCGGCTGGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGACTTCAGGTCAGGTTaGACAGACATCACGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TGWEAVAGQVSKAAYSRSDFRSG*TDITRP
Trigger: CGGCCTCGTGATGTCTGTGCAACCTGACCTGAAGTC...ACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp CCGGCAGCCCCCACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTAGAAGGGCACGGAGGTaGAGGAGAGCTCGGTGGACT +
Preference number: 4 (lower is better)
Translates to: PAAPTEDAELPEGLSIICRRARR*RRARWT
Trigger: AGTCCACCGAGCTCTCCTCCACCTCCGTGCCCTTCT...ACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGTGGGGGCTGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp TGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCTGGGCTCTGTAGCTaGTGGGGGCTGTTACTGGGT +
Preference number: 4 (lower is better)
Translates to: CRPRAGRSPRPTRRGHQEPGLCS*WGLLLG
Trigger: ACCCAGTAACAGCCCCCACCAGCTACAGAGCCCAGG...TTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp ACTCCCACGGGTGCAAGATACCAATTCCCACACACAGACACATCCTGCGGGGAGCGGGGCCCAGCTGCCTaGTACAGTCCGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: TPTGARYQFPHTDTSCGERGPAA*YSPWGD
Trigger: ATCTCCCCACGGACTGTACCAGGCAGCTGGGCCCCG...CTCCCCGCAGGATGTGTCTGTGTGTGGGAATTGGTATCTTGCACCCGTGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp ACCGGCTGGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTACGGCCCACAAGACGTaGACACCAAGAACCCCAAGA +
Preference number: 4 (lower is better)
Translates to: TGWEAVAGQVSKAAYSRSTAHKT*TPRTPR
Trigger: TCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGT...ACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp CGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCCACCTCCACTGGACATaGGCATCATGGGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RGRTGVEGCLQQEWKTSPHLHWT*ASWGRV
Trigger: CACCCGCCCCCATGATGCCCATGTCCAGTGGAGGTG...GGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403150.5
3UTR CAA 72 bp TGGATTACCTACCACGGCCACGGGGGCAACGGCTGTTaGGGAACACGCAGGCCTTTGCTCTGTAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: WITYHGHGGNGC*GTRRPLLCRDP
Trigger: TGGGTCCCTACAGAGCAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCCCGTGGCCGTGGTAGGTAATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp GCTCTCCAGGAAAAGGAAGCCCAAGGTGGAGTGCCAAGCCCACTGGTGCCTCAGAGACCTCACGACGTGTaGGCCACTCTCTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: ALQEKEAQGGVPSPLVPQRPHDV*ATLSAM
Trigger: CATGGCAGAGAGAGTGGCTCACACGTCGTGAGGTCT...CTGAGGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp ACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACCCCCGCGGCTCTCGCTaGAGAGACCCCAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: TGVEGCLQQEWKTSPMLDPRGSR*RDPSHR
Trigger: CCTGTGACTGGGGTCTCTGCAGCGAGAGCCGCGGGG...GTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp GTGTCTTCCGGCAGCCCCCACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATCCGTGCCCCCGGCTCTaGTCTGATAGATTTACAGTA +
Preference number: 4 (lower is better)
Translates to: VSSGSPHRGRGTSRGPFHPCPRL*SDRFTV
Trigger: TACTGTAAATCTATCAGAGCAGAGCCGGGGGCACGG...ATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGTGGGGGCTGCCGGAAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp GACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGAGGGGAGCCGCCGCCCTaGCGAGCATTTGACCGTCTG +
Preference number: 4 (lower is better)
Translates to: DRCRRLLTAGVENKPHARGEPPP*RAFDRL
Trigger: CAGACGGTCAAATGCTCGGCAGGGCGGCGGCTCCCC...TCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp ACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACGGGTGCAAGAAGGGCACGGAGGTaGAGGAGAGCTCGGTGGACT +
Preference number: 4 (lower is better)
Translates to: TRNFPRAFPLYVPTPTGARRARR*RRARWT
Trigger: AGTCCACCGAGCTCTCCTCCACCTCCGTGCCCTTCT...TGCACCCGTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp TCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACGTGACAAAGAGTTGTGGGGTCGGTGTCTaGGGGGCCGGATCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SLGSRRHGDRKQTHVTKSCGVGV*GAGSRG
Trigger: CCCACGGGATCCGGCCCCCCAGACACCGACCCCACA...ACTCTTTGTCACGTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp ACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTTCCCCCTGGTCCTTATaGCATCCAATATGGATTACC +
Preference number: 4 (lower is better)
Translates to: TWTPRTPRRDRTGHPLRPSPWSL*HPIWIT
Trigger: GGTAATCCATATTGGATGTCATAAGGACCAGGGGGA...AGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp CACAAGACGTGGACACCAAGAACCCCAAGACGGGACAGAACCGGCCACCCGCTGGTATCAAACGTCAAATaGTGGGGCGCTCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HKTWTPRTPRRDRTGHPLVSNVK*WGAPAC
Trigger: ACAGGCAGGAGCGCCCCATCATTTGACGTTTGATAC...CAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp GCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGGCCCACTCTTCACCCTaGAATACAGTCTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGRSPRPTRRGHQEPQDGAHSSP*NTVSSW
Trigger: CCAGGAAGAGACTGTATTGCAGGGTGAAGAGTGGGC...CCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp TCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACGTGACAAAGAGTGTCTGTGGACCGGCGTaGAGCTCTGGGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: SLGSRRHGDRKQTHVTKSVCGPA*SSGPTG
Trigger: TCCCGTGGGCCCAGAGCTGCACGCCGGTCCACAGAC...ACTCTTTGTCACGTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp GACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACCGACACACCATCCATaGTCCTCCCCGGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: DRCRRLLTAGVENKPHARPTHHP*SSPGTA
Trigger: CGCAGTCCCCGGGGAGGAGCATGGATGGTGTGTCGG...TCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACCCCCCTCAGCCCTGCTaGTTTGATGGCAGGCGTGCG +
Preference number: 4 (lower is better)
Translates to: TGVEGCLQQEWKTSPMLDPPQPC*FDGRRA
Trigger: CGCACGCCTGCCATCAAAGCAGCAGGGCTGAGGGGG...GTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp AAGACCTGGATCTCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACGGGGCTTCTGCGCTGTaGTGCACGACCTCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: KTWISLGSRRHGDRKQTHGASAL*CTTSSG
Trigger: ACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCC...GTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp ACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACGTGGGCAGGGGCTTCTaGGCTGTGCTGCACGACCTC +
Preference number: 4 (lower is better)
Translates to: TGVEGCLQQEWKTSPMLDVGRGF*AVLHDL
Trigger: GAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCAC...GTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACTCAAGGCTTTCCACCTaGTCTCGCACACGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TEDAELPEGLSIICPDSHSRLST*SRTRLP
Trigger: CGGGAGCCGTGTGCGAGAGCAGGTGGAAAGCCTTGA...GTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp ACTCCCACGGGTGCAAGATACCAATTCCCACACACAGACACATCCTGCGGGGAGGCTGCATCCTGGTCCTaGCCCTCAAGGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: TPTGARYQFPHTDTSCGEAASWS*PSRLST
Trigger: GGTGGAAAGCCTTGAGGGGCAGGACCAGGATGCAGC...CTCCCCGCAGGATGTGTCTGTGTGTGGGAATTGGTATCTTGCACCCGTGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp GCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAACCCCAAGACGGGCCGTGCCCCCGGCTCTaGTCTGATAGATTTACAGTA +
Preference number: 4 (lower is better)
Translates to: AGRSPRPTRRGHQEPQDGPCPRL*SDRFTV
Trigger: TACTGTAAATCTATCAGAGCAGAGCCGGGGGCACGG...CCCGTCTTGGGGTTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ACTCCCACGGGTGCAAGATACCAATTCCCACACACAGACACATCCTGCGGGGAGAAGCAGAACACACCGTaGTTCCCCGGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TPTGARYQFPHTDTSCGEKQNTP*FPGPAL
Trigger: CAGAGCTGGGCCGGGGAAGCACGGTGTGTTCTGCTT...CTCCCCGCAGGATGTGTCTGTGTGTGGGAATTGGTATCTTGCACCCGTGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR GCA 90 bp ATTTACAGTATCAAACGTCAAATGATGGGGCGCTCCTGCCTGTGTCCGCTGAGAGCATCCCGTCCTCCCTaGCAGCCCAGGACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: IYSIKRQMMGRSCLCPLRASRPP*QPRTLP
Trigger: GGGGAGGGTCCTGGGCTGGCAGGGAGGACGGGATGC...TCTCAGCGGACACAGGCAGGAGCGCCCCATCATTTGACGTTTGATACTGTAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp GCTCTCCAGGAAAAGGAAGCCCAAGGTGGAGTGCCAAGCCCACTGGTGCCTCAGGTGCCTCAGTGCTCTTaGAAGGAGGAGCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ALQEKEAQGGVPSPLVPQVPQCS*KEEQAK
Trigger: CTTTGCCTGCTCCTCCTTCCAAGAGCACTGAGGCAC...CTGAGGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp ACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACTCTGTAGGGACCCAGTaGTCCTGGCGGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGVEGCLQQEWKTSPMLDSVGTQ*SWRACS
Trigger: GCTGCAGGCCCGCCAGGACCACTGGGTCCCTACAGA...GTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp AGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGGGGGCAACGGCTGTTTaGGAACACGCAGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RPWQDRCRRLLTAGVENKGATAV*EHAGLC
Trigger: GCAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCC...CTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CCA 90 bp ACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACCTTCGCACCACGTCCTaGGGTGAGGGTGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: TEDAELPEGLSIICPDSHLRTTS*GEGDSG
Trigger: TCCACTGTCACCCTCACCCCAGGACGTGGTGCGAAG...GTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR TCA 90 bp TCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACGTGACAAAGAGTCCAGCTCATCATCGCTaGGCACCGGGGCGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: SLGSRRHGDRKQTHVTKSPAHHR*APGRSR
Trigger: GCGAGAACGCCCCGGTGCTCAGCGATGATGAGCTGG...ACTCTTTGTCACGTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp ACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACTCAGCCCTGCTGCTTTaGTGGCAGGCGTGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: TGVEGCLQQEWKTSPMLDSALLL*WQACVH
Trigger: GTGCACGCACGCCTGCCATCAAAGCAGCAGGGCTGA...GTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR TCA 90 bp ACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCCCGACTCCCACCTGATCTCAGGGCGCTaGCGTAGATGGCACAGGATG +
Preference number: 4 (lower is better)
Translates to: TEDAELPEGLSIICPDSHLISGR*RRWHRM
Trigger: CATCCTGTGCCATCTACGTCAGCGCCCTGAGATCAG...GTGGGAGTCGGGACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR GCA 90 bp GACCCAGTGGTCCTGGCGGGCCTGCAGCTTCCCACTCAACTTCTAACAGTAGACCGGATGTCGAGAGTCTaGATCCCAGTGACAGGTACG +
Preference number: 4 (lower is better)
Translates to: DPVVLAGLQLPTQLLTVDRMSRV*IPVTGT
Trigger: CGTACCTGTCACTGGGATGCAGACTCTCGACATCCG...GTCTACTGTTAGAAGTTGAGTGGGAAGCTGCAGGCCCGCCAGGACCACTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp AAGACCTGGATCTCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACGCGGATCACGGGCACTaGAACGGGACAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KTWISLGSRRHGDRKQTHADHGH*NGTAGR
Trigger: CCTTCCAGCTGTCCCGTTGCAGTGCCCGTGATCCGC...GTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp TGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCCCAAACGCGATCCTaGCTTCAGGTCAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: WQDRCRRLLTAGVENKPHAQTRS*LQVRLH
Trigger: GTGCAACCTGACCTGAAGTCAGGATCGCGTTTGGGC...ATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CCA 90 bp TGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATAAGCCAGCTGCATCCTaGTCCTGCCCCTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: WQDRCRRLLTAGVENKPHKPAAS*SCPSRL
Trigger: AAGCCTTGAGGGGCAGGACCAGGATGCAGCTGGCTT...ATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp TGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATTCGTTCCCCCTGCACTaGCCACAGTTGGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: WQDRCRRLLTAGVENKPHSFPLH*PQLVRS
Trigger: ACTTCTCACCAACTGTGGTCAGTGCAGGGGGAACGA...ATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp AAGACCTGGATCTCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACCTGGAAGGACGGAGCTaGCGACACACCATCCATGCT +
Preference number: 4 (lower is better)
Translates to: KTWISLGSRRHGDRKQTHLEGRS*RHTIHA
Trigger: AGCATGGATGGTGTGTCGGCAGCTCCGTCCTTCCAG...GTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR TCA 90 bp TCTTTGGGAAGCCGGAGGCACGGAGACAGAAAACAAACCCACGTGACAAAGAGTTGCCAGGCTCACTCCTaGGCTCTTCTACAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLGSRRHGDRKQTHVTKSCQAHS*ALLQAS
Trigger: GCTGGCTTGTAGAAGAGCTCAGGAGTGAGCCTGGCA...ACTCTTTGTCACGTGGGTTTGTTTTCTGTCTCCGTGCCTCCGGCTTCCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR GCA 90 bp AGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGACAGGTGTCGAAGGCTaGTTACAGCAGGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RPWQDRCRRLLTAGVENKTGVEG*LQQEWK
Trigger: TTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT...CTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CCA 90 bp ACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGCCCCATGCTAGACAAAGGAAGCCCAAGGTaGAGTGCCAAGCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: TGVEGCLQQEWKTSPMLDKGSPR*SAKPTG
Trigger: ACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTT...GTCTAGCATGGGGCTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS GCA 90 bp GCCGCCGCCTGGCGCTCGGGCTCCGACTTCGCGAAGAACAACAAGTaGCCCCGCGCCGCCCGCCGCCACCGCACCCGCCCGCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: AAAWRSGSDFAKNNK*PRAARRHRTRPPGS
Trigger: GGAGCCGGGCGGGCGGGTGCGGTGGCGGCGGGCGGCGCGGGGGCACTTGTTGTTCTTCGCGAAGTCGGAGCCCGAGCGCCAGGCGGCGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS CCA 90 bp AACCCGGGCACGGTCACCAGGACAGAGCTCCCTGGAACTCGTAGCTaGCGTCGCGCGGAGGGCGCGGGCGCGCGGCGGCTCCTCGCGGGC +
Preference number: 5 (lower is better)
Translates to: NPGTVTRTELPGTRS*RRAEGAGARRLLAG
Trigger: GCCCGCGAGGAGCCGCCGCGCGCCCGCGCCCTCCGCGCGACGCCAGCTACGAGTTCCAGGGAGCTCTGTCCTGGTGACCGTGCCCGGGTT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CAA 90 bp ACCCCAAGACGGGACAGAACCGGCCACCCGCTGCGGCCTGTCCTGCGGGGCCCAGTTGCCATGGCGACCTaGGGACCGAGCCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TPRRDRTGHPLRPVLRGPVAMAT*GPSQPP
Trigger: TGGGGGCTGGCTCGGTCCCAAGGTCGCCATGGCAAC...TGGGCCCCGCAGGACAGGCCGCAGCGGGTGGCCGGTTCTGTCCCGTCTTGGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CAA 90 bp CGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGGGGAGATGGCCCGGGCCTCCGCTTaGCTCCCAACTCCCACCTGT +
Preference number: 5 (lower is better)
Translates to: RCGLSCGAQLPGTVRGEMARASA*LPTPTC
Trigger: ACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGC...CATCTCCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS TCA 90 bp TGCCGAGTCCGCTGCCCCTGCCAAGGCCAGCTGATCTCAGGGCGCTaGCGTAGATGGCACAGGATGGCACCAGCCGGTCCCGGGGACGGC +
Preference number: 5 (lower is better)
Translates to: CRVRCPCQGQLISGR*RRWHRMAPAGPGDG
Trigger: GCCGTCCCCGGGACCGGCTGGTGCCATCCTGTGCCATCTACGTCAGCGCCCTGAGATCAGCTGGCCTTGGCAGGGGCAGCGGACTCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CAA 90 bp GCGCTCCTGCCTGTGTCCGCTGAGATCCGGGACGGCCTGTGGGGTCGGTGTCTGGCCCGGGCCTCCGCTTaGCTCCCAACTCCCACCTGT +
Preference number: 5 (lower is better)
Translates to: ALLPVSAEIRDGLWGRCLARASA*LPTPTC
Trigger: ACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGC...CAGACACCGACCCCACAGGCCGTCCCGGATCTCAGCGGACACAGGCAGGAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS GCA 90 bp GTTGCACAGACATCACGAGGCCGGCAGGCAGTCAACAAACCCATTTaGACCCGGCGGCCGGGACGGGCGGGCAGAAGGCGCCGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: VAQTSRGRQAVNKPI*TRRPGRAGRRRRAA
Trigger: AGCTGCCCGGCGCCTTCTGCCCGCCCGTCCCGGCCGCCGGGTGCAAATGGGTTTGTTGACTGCCTGCCGGCCTCGTGATGTCTGTGCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CCA 90 bp GTAGATGGCACAGGATGGCACCAGCCGGTCCCGGGGACGGCCAGGTaGGCTCCAGGCTCCTTCGCACCACGTCCTGGGGTGAGGGTGACA +
Preference number: 5 (lower is better)
Translates to: VDGTGWHQPVPGTAR*APGSFAPRPGVRVT
Trigger: TGTCACCCTCACCCCAGGACGTGGTGCGAAGGAGCCTGGAGCCCACCTGGCCGTCCCCGGGACCGGCTGGTGCCATCCTGTGCCATCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CAA 90 bp CCAGCTCTGGGCGGTGACAGCGGCTCCGTCCACCCTGGGGACCAGGGAGTCCCTAGTCAACAAACCCATTaGCACCCGGCGGCCGGGACG +
Preference number: 5 (lower is better)
Translates to: PALGGDSGSVHPGDQGVPSQQTH*HPAAGT
Trigger: CGTCCCGGCCGCCGGGTGCAAATGGGTTTGTTGACT...AGGGACTCCCTGGTCCCCAGGGTGGACGGAGCCGCTGTCACCGCCCAGAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS TCA 90 bp TCCTTGGTCAGCACCTCCACTGGACATGGGCATCATGGGGGCGGGTaGCCGCATCCCGTCCTCCCTGCCAGCCCAGGACCCTCCCCACAC +
Preference number: 5 (lower is better)
Translates to: SLVSTSTGHGHHGGG*PHPVLPASPGPSPH
Trigger: GTGTGGGGAGGGTCCTGGGCTGGCAGGGAGGACGGGATGCGGTCACCCGCCCCCATGATGCCCATGTCCAGTGGAGGTGCTGACCAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS TCA 90 bp CAGAGCTCCCTGGAACTCGTAGCACGGCCCTGGCCGCTGCGGCTGTaGCATCACCACCTCCACCTAAGCTGCCCCCGAGCGAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: QSSLELVARPWPLRL*HHHLHLSCPRARTL
Trigger: CAGGGTCCTCGCTCGGGGGCAGCTTAGGTGGAGGTGGTGATGTCACAGCCGCAGCGGCCAGGGCCGTGCTACGAGTTCCAGGGAGCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS GCA 90 bp CACAAACCCCCACAACAAGAGGGCCGCACAGGTGAGACAGGGTCCTaGGCCAGGCTGCCGAGTCCGCTGCCCCTGCCAAGGCCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: HKPPQQEGRTGETGS*ARLPSPLPLPRPAD
Trigger: ATCAGCTGGCCTTGGCAGGGGCAGCGGACTCGGCAGCCTGGCGCAGGACCCTGTCTCACCTGTGCGGCCCTCTTGTTGTGGGGGTTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CAA 90 bp GCGGGCAGCCCGGGCCTCCGCTTTGCTCCCAACTCCCACCTGTGCCCGTGCCCCTCGCCCGCCTCCTTCTaGACCTTTAATGCCTTATTC +
Preference number: 5 (lower is better)
Translates to: AGSPGLRFAPNSHLCPCPSPASF*TFNALF
Trigger: GAATAAGGCATTAAAGGTCAAGAAGGAGGCGGGCGA...GGGGCACGGGCACAGGTGGGAGTTGGGAGCAAAGCGGAGGCCCGGGCTGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CAA 90 bp AGCAGCAGGACGCACGGCAATAAATTAGGTGGTGGCCGCAGGGACGGGGCAGGGCCGAGGGGCCTGCGCTaGGACTCGGATGTCGAGAGT +
Preference number: 5 (lower is better)
Translates to: SSRTHGNKLGGGRRDGAGPRGLR*DSDVES
Trigger: ACTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCGG...CCCTGCCCCGTCCCTGCGGCCACCACCTAATTTATTGCCGTGCGTCCTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CAA 90 bp AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCGCCCTGCCGAGCATTaGACCGTCTGGCGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: KHCRPRAGRSPRPTRRGHRPAEH*TVWRES
Trigger: CGACTCCCGCCAGACGGTCAAATGCTCGGCAGGGCG...GTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CAA 90 bp GTGTCTTCCGGCAGCCCCCACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATCTCAGCCCTGCTGCTTaGATGGCAGGCGTGCGTGCA +
Preference number: 5 (lower is better)
Translates to: VSSGSPHRGRGTSRGPFHLSPAA*MAGVRA
Trigger: TGCACGCACGCCTGCCATCAAAGCAGCAGGGCTGAG...ATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGTGGGGGCTGCCGGAAGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CAA 90 bp GATCCCGTGGGCAGGGGCTTCTGCGCTGTGCTGCACGACCTCCTCGGGTCACCAGGTGCCTCAGTGCTCTaGGAAGGAGGAGCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: DPVGRGFCAVLHDLLGSPGASVL*EGGAGK
Trigger: TTTGCCTGCTCCTCCTTCCAAGAGCACTGAGGCACC...TGGTGACCCGAGGAGGTCGTGCAGCACAGCGCAGAAGCCCCTGCCCACGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CAA 90 bp AAGCACTGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACGCCCCAGGCACCACCTaGCAGGTCTTATGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: KHCRPRAGRSPRPTRRGHAPGTT*QVLCGG
Trigger: GCCGCCACATAAGACCTGCAAGGTGGTGCCTGGGGC...GTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCAGTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS TCA 90 bp GACCAGCAGGCGCCGGCAGTGGCTGCTTCCTGTTCTGACTCTCCCTaGGGTCAGAGAAGACGTCTGCACCTGCACAGCACAAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: DQQAPAVAASCSDSP*GQRRRLHLHSTRCP
Trigger: GGGGCACCTTGTGCTGTGCAGGTGCAGACGTCTTCTCTGACCTCAGGGAGAGTCAGAACAGGAAGCAGCCACTGCCGGCGCCTGCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406174.2
CDS-3UTR CAA 90 bp CCGGCAGCCCCCACAGAGGACGCGGAACTTCCCGAGGGCCTTTCCATTATATGTCTCAGCCCTGCTGCTTaGATGGCAGGCGTGCGTGCA +
Preference number: 5 (lower is better)
Translates to: PAAPTEDAELPEGLSIICLSPAA*MAGVRA
Trigger: TGCACGCACGCCTGCCATCAAAGCAGCAGGGCTGAG...ACATATAATGGAAAGGCCCTCGGGAAGTTCCGCGTCCTCTGTGGGGGCTGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CAA 90 bp TGGTGTGAGCTGCCTGCGCCCGAGGGGCCTGCGCTTGGACTCGGATGTCGAGAGTCGCCCGCCTCCTTCTaGACCTTTAATGCCTTATTC +
Preference number: 5 (lower is better)
Translates to: WCELPAPEGPALGLGCRESPASF*TFNALF
Trigger: GAATAAGGCATTAAAGGTCAAGAAGGAGGCGGGCGA...CTCTCGACATCCGAGTCCAAGCGCAGGCCCCTCGGGCGCAGGCAGCTCACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CAA 90 bp GCTCTCCAGGAAAAGGAAGCCCAAGGTGGAGTGCCAAGCCCACTGGTGCCTCAGGGAACACGCAGGCCTTaGCTCTGTAGGGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: ALQEKEAQGGVPSPLVPQGTRRP*LCRDPV
Trigger: CACTGGGTCCCTACAGAGCAAAGGCCTGCGTGTTCC...CTGAGGCACCAGTGGGCTTGGCACTCCACCTTGGGCTTCCTTTTCCTGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CAA 90 bp TGCAGGCCAAGGGCAGGTAGAAGCCCACGGCCCACAAGACGTGGACACCAAGAAAGCCAGCCCCCACGGTaGTCATGGAAACCGAGAAGC +
Preference number: 5 (lower is better)
Translates to: CRPRAGRSPRPTRRGHQESQPPR*SWKPRS
Trigger: GCTTCTCGGTTTCCATGACAACCGTGGGGGCTGGCT...TTCTTGGTGTCCACGTCTTGTGGGCCGTGGGCTTCTACCTGCCCTTGGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS TCA 90 bp AGCCCCCACGGTTGTCATGGAAACCGAGAAGCCCAAACGCGATCCTaGCTTCAGGTCAGGTTGCACAGACATCACGAGGCCGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SPHGCHGNREAQTRS*LQVRLHRHHEAGRQ
Trigger: CTGCCTGCCGGCCTCGTGATGTCTGTGCAACCTGACCTGAAGTCAGGATCGCGTTTGGGCTTCTCGGTTTCCATGACAACCGTGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CCA 90 bp ACCAGACACAGGTTCCCACAGGAACATCAGAGCAGCACACGGCGGTaGGGGGTGTCCTTGGTCAGCACCTCCACTGGACATGGGCATCAT +
Preference number: 5 (lower is better)
Translates to: TRHRFPQEHQSSTRR*GVSLVSTSTGHGHH
Trigger: ATGATGCCCATGTCCAGTGGAGGTGCTGACCAAGGACACCCCCCACCGCCGTGTGCTGCTCTGATGTTCCTGTGGGAACCTGTGTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CCA 90 bp GTTGCCATGGCGACCTTGGGACCGAGCCAGCCCCCACGGTTGTCATaGAAACCGAGAAGCCCAAACGCGATCCTGACTTCAGGTCAGGTT +
Preference number: 5 (lower is better)
Translates to: VAMATLGPSQPPRLS*KPRSPNAILTSGQV
Trigger: AACCTGACCTGAAGTCAGGATCGCGTTTGGGCTTCTCGGTTTCCATGACAACCGTGGGGGCTGGCTCGGTCCCAAGGTCGCCATGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS-3UTR CAA 90 bp CGCTGCGGCCTGTCCTGCGGGGCCCAGCTGCCTGGTACAGTCCGTGGGGAGATGAATGCCTTATTCGGTTaGGGATTAGTCGTCATAACC +
Preference number: 5 (lower is better)
Translates to: RCGLSCGAQLPGTVRGEMNALFG*GLVVIT
Trigger: GGTTATGACGACTAATCCCAAACCGAATAAGGCATT...CATCTCCCCACGGACTGTACCAGGCAGCTGGGCCCCGCAGGACAGGCCGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS-3UTR CAA 90 bp AGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTGGAAAACAAGGGGGGCAACGGCTGTTaGGGAACACGCAGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: RPWQDRCRRLLTAGVENKGGNGC*GTRRPL
Trigger: CAAAGGCCTGCGTGTTCCCAAACAGCCGTTGCCCCC...CTTGTTTTCCACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CAA 90 bp ACTCCCACGGGTGCAAGATACCAATTCCCACACACAGACACATCCTGCGGGGAGAAGACCTGGATCTCTTaGGGAAGCCGGAGGCACGGA +
Preference number: 5 (lower is better)
Translates to: TPTGARYQFPHTDTSCGEKTWIS*GSRRHG
Trigger: TCCGTGCCTCCGGCTTCCCAAAGAGATCCAGGTCTT...CTCCCCGCAGGATGTGTCTGTGTGTGGGAATTGGTATCTTGCACCCGTGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS-3UTR CAA 90 bp ACCGGCTGGGAGGCCGTGGCAGGACAGGTGTCGAAGGCTGCTTACAGCAGGAGTAATGCCTTATTCGGTTaGGGATTAGTCGTCATAACC +
Preference number: 5 (lower is better)
Translates to: TGWEAVAGQVSKAAYSRSNALFG*GLVVIT
Trigger: GGTTATGACGACTAATCCCAAACCGAATAAGGCATT...ACTCCTGCTGTAAGCAGCCTTCGACACCTGTCCTGCCACGGCCTCCCAGCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343242.9
ENST00000403150.5
CDS GCA 90 bp ATGGAAACCGAGAAGCCCAAACGCGATCCTGACTTCAGGTCAGGTTaGACAGACATCACGAGGCCGGCAGGCAGTCAACAAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: METEKPKRDPDFRSG*TDITRPAGSQQTHL
Trigger: CAAATGGGTTTGTTGACTGCCTGCCGGCCTCGTGATGTCTGTGCAACCTGACCTGAAGTCAGGATCGCGTTTGGGCTTCTCGGTTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS GCA 72 bp TGGCGCTCGGGCTCCGACTTCGCGAAGAACAACAAGTaGCCCCGCGCCGCCCGCCGCCACCGCACCCGCCCG +
Preference number: 6 (lower is better)
Translates to: WRSGSDFAKNNK*PRAARRHRTRP
Trigger: CGGGCGGGTGCGGTGGCGGCGGGCGGCGCGGGGGCACTTGTTGTTCTTCGCGAAGTCGGAGCCCGAGCGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS CCA 72 bp ACGGTCACCAGGACAGAGCTCCCTGGAACTCGTAGCTaGCGTCGCGCGGAGGGCGCGGGCGCGCGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: TVTRTELPGTRS*RRAEGAGARRL
Trigger: GAGCCGCCGCGCGCCCGCGCCCTCCGCGCGACGCCAGCTACGAGTTCCAGGGAGCTCTGTCCTGGTGACCGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343242.9
CDS CCA 72 bp GGCAGGTCCGGGGGCCGCAGCCAGAGACCAGGGAGGTaGGGGAGCCGCCGCCCTGCCGAGCATTTGACCGTC +
Preference number: 6 (lower is better)
Translates to: GRSGGRSQRPGR*GSRRPAEHLTV
Trigger: GACGGTCAAATGCTCGGCAGGGCGGCGGCTCCCCCACCTCCCTGGTCTCTGGCTGCGGCCCCCGGACCTGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CCA 72 bp CTGGAACTCGTAGCTGGGCTGCAGCCGCCGGCACTGTaGGGTGACCAGCAGGCGCCGGCAGTGGCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: LELVAGLQPPAL*GDQQAPAVAAS
Trigger: GGAAGCAGCCACTGCCGGCGCCTGCTGGTCACCCCACAGTGCCGGCGGCTGCAGCCCAGCTACGAGTTCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406174.2
CDS TCA 72 bp AGCACCTCCACTGGACATGGGCATCATGGGGGCGGGTaGCCGCATCCCGTCCTCCCTGCCAGCCCAGGACCC +
Preference number: 6 (lower is better)
Translates to: STSTGHGHHGGG*PHPVLPASPGP
Trigger: GGGTCCTGGGCTGGCAGGGAGGACGGGATGCGGTCACCCGCCCCCATGATGCCCATGTCCAGTGGAGGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS TCA 72 bp ACTCGTAGCTGGGCTGCAGCCGCCGGCACTGTGGGGTaGCCAGCAGGCGCCGGCAGTGGCTGCTTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: TRSWAAAAGTVG*PAGAGSGCFLF
Trigger: GAACAGGAAGCAGCCACTGCCGGCGCCTGCTGGTCACCCCACAGTGCCGGCGGCTGCAGCCCAGCTACGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406174.2
CDS GCA 72 bp CCACAACAAGAGGGCCGCACAGGTGAGACAGGGTCCTaGGCCAGGCTGCCGAGTCCGCTGCCCCTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: PQQEGRTGETGS*ARLPSPLPLPR
Trigger: CCTTGGCAGGGGCAGCGGACTCGGCAGCCTGGCGCAGGACCCTGTCTCACCTGTGCGGCCCTCTTGTTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS GCA 72 bp ACATCACGAGGCCGGCAGGCAGTCAACAAACCCATTTaGACCCGGCGGCCGGGACGGGCGGGCAGAAGGCGC +
Preference number: 6 (lower is better)
Translates to: TSRGRQAVNKPI*TRRPGRAGRRR
Trigger: GCGCCTTCTGCCCGCCCGTCCCGGCCGCCGGGTGCAAATGGGTTTGTTGACTGCCTGCCGGCCTCGTGATGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS TCA 72 bp CTGGAACTCGTAGCACGGCCCTGGCCGCTGCGGCTGTaGCATCACCACCTCCACCTAAGCTGCCCCCGAGCG +
Preference number: 6 (lower is better)
Translates to: LELVARPWPLRL*HHHLHLSCPRA
Trigger: CGCTCGGGGGCAGCTTAGGTGGAGGTGGTGATGTCACAGCCGCAGCGGCCAGGGCCGTGCTACGAGTTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS TCA 72 bp CAGGCTGCCGAGTCCGCTGCCCCTGCCAAGGCCAGCTaGTCTCAGGGCGCTGACGTAGATGGCACAGGATGG +
Preference number: 6 (lower is better)
Translates to: QAAESAAPAKAS*SQGADVDGTGW
Trigger: CCATCCTGTGCCATCTACGTCAGCGCCCTGAGATCAGCTGGCCTTGGCAGGGGCAGCGGACTCGGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CCA 72 bp GTCCTTGGTCAGCACCTCCACTGGACATGGGCATCATaGGGGCGGGTGACCGCATCCCGTCCTCCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: VLGQHLHWTWAS*GRVTASRPPCQ
Trigger: CTGGCAGGGAGGACGGGATGCGGTCACCCGCCCCCATGATGCCCATGTCCAGTGGAGGTGCTGACCAAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CAA 72 bp CCCGGCATGAGCCCTCCGATAGTTGCCATGGCGACCTaGGGACCGAGCCAGCCCCCACGGTTGTCATGGAAA +
Preference number: 6 (lower is better)
Translates to: PGMSPPIVAMAT*GPSQPPRLSWK
Trigger: TTTCCATGACAACCGTGGGGGCTGGCTCGGTCCCAAGGTCGCCATGGCAACTATCGGAGGGCTCATGCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CAA 90 bp CAAAGCATCCCCGGCATGAGCCCTCCGATAGTTGCCATGGCGACCTaGGGACCGAGCCAGCCCCCACGGTTGTCATGGAAACCGAGAAGC +
Preference number: 6 (lower is better)
Translates to: QSIPGMSPPIVAMAT*GPSQPPRLSWKPRS
Trigger: GCTTCTCGGTTTCCATGACAACCGTGGGGGCTGGCTCGGTCCCAAGGTCGCCATGGCAACTATCGGAGGGCTCATGCCGGGGATGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS TCA 72 bp GCGCCGGCAGTGGCTGCTTCCTGTTCTGACTCTCCCTaGGGTCAGAGAAGACGTCTGCACCTGCACAGCACA +
Preference number: 6 (lower is better)
Translates to: APAVAASCSDSP*GQRRRLHLHST
Trigger: TGTGCTGTGCAGGTGCAGACGTCTTCTCTGACCTCAGGGAGAGTCAGAACAGGAAGCAGCCACTGCCGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406174.2
CDS CCA 72 bp AGGTTCCCACAGGAACATCAGAGCAGCACACGGCGGTaGGGGGTGTCCTTGGTCAGCACCTCCACTGGACAT +
Preference number: 6 (lower is better)
Translates to: RFPQEHQSSTRR*GVSLVSTSTGH
Trigger: ATGTCCAGTGGAGGTGCTGACCAAGGACACCCCCCACCGCCGTGTGCTGCTCTGATGTTCCTGTGGGAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CCA 72 bp GCGACCTTGGGACCGAGCCAGCCCCCACGGTTGTCATaGAAACCGAGAAGCCCAAACGCGATCCTGACTTCA +
Preference number: 6 (lower is better)
Translates to: ATLGPSQPPRLS*KPRSPNAILTS
Trigger: TGAAGTCAGGATCGCGTTTGGGCTTCTCGGTTTCCATGACAACCGTGGGGGCTGGCTCGGTCCCAAGGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CAA 90 bp CCGATAGTTGCCATGGCGACCTTGGGACCGAGCCAGCCCCCACGGTaGTCATGGAAACCGAGAAGCCCAAACGCGATCCTGACTTCAGGT +
Preference number: 6 (lower is better)
Translates to: PIVAMATLGPSQPPR*SWKPRSPNAILTSG
Trigger: ACCTGAAGTCAGGATCGCGTTTGGGCTTCTCGGTTTCCATGACAACCGTGGGGGCTGGCTCGGTCCCAAGGTCGCCATGGCAACTATCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS GCA 72 bp GAGAAGCCCAAACGCGATCCTGACTTCAGGTCAGGTTaGACAGACATCACGAGGCCGGCAGGCAGTCAACAA +
Preference number: 6 (lower is better)
Translates to: EKPKRDPDFRSG*TDITRPAGSQQ
Trigger: TTGTTGACTGCCTGCCGGCCTCGTGATGTCTGTGCAACCTGACCTGAAGTCAGGATCGCGTTTGGGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS TCA 72 bp GGTTGTCATGGAAACCGAGAAGCCCAAACGCGATCCTaGCTTCAGGTCAGGTTGCACAGACATCACGAGGCC +
Preference number: 6 (lower is better)
Translates to: GCHGNREAQTRS*LQVRLHRHHEA
Trigger: GGCCTCGTGATGTCTGTGCAACCTGACCTGAAGTCAGGATCGCGTTTGGGCTTCTCGGTTTCCATGACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403150.5
CDS CAA 72 bp CCCGCCTCCTTCTTGACCTTTAATGCCTTATTCGGTTaGGGATTAGTCGTCATAACCCGGGCACGGTCACCA +
Preference number: 6 (lower is better)
Translates to: PASFLTFNALFG*GLVVITRARSP
Trigger: TGGTGACCGTGCCCGGGTTATGACGACTAATCCCAAACCGAATAAGGCATTAAAGGTCAAGAAGGAGGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343242.9
ENST00000403150.5
ENST00000406174.2