RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAF (Homo sapiens)

Ensembl gene IDs: ENSG00000178573

Ensembl transcript IDs: ENST00000326043.5, ENST00000393350.1, ENST00000569649.1

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCGAGCAGGGTGTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTGTGCGTGCGGGTTTGTGTGTGTGTAGGGGGCCAAGGGGG +
Preference number: 1 (lower is better)
Translates to: TRAGCGVCVCVCVCV*CVRAGLCVCRGPRG
Trigger: CCCCCTTGGCCCCCTACACACACACAAACCCGCACGCACACACCACACACACACACACACACACACACACACCCCACACCCTGCTCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 90 bp GGTAAGTACACGATGCTGGGGCTTCCAAAATGTGGCGTATCCCACTaGTGGCTCCAACTTGCGAGTGGGCTCAGTTCTGTAATTGGAATG +
Preference number: 1 (lower is better)
Translates to: GKYTMLGLPKCGVSH*WLQLASGLSSVIGM
Trigger: CATTCCAATTACAGAACTGAGCCCACTCGCAAGTTGGAGCCATCAGTGGGATACGCCACATTTTGGAAGCCCCAGCATCGTGTACTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 90 bp GCTGTTTCTCTTTACCGTTCAATGCATATGTGCGCAAGCCACCTCTaGTGCGCCATATTTGTCCGGCTCCTCTGTCTATGGATGGCTTTG +
Preference number: 1 (lower is better)
Translates to: AVSLYRSMHMCASHL*CAIFVRLLCLWMAL
Trigger: CAAAGCCATCCATAGACAGAGGAGCCGGACAAATATGGCGCATCAGAGGTGGCTTGCGCACATATGCATTGAACGGTAAAGAGAAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR CCA 90 bp TCACACAAATTTCATTTTGTGAACACACTGGTAAGTACACGATGCTaGGGCTTCCAAAATGTGGCGTATCCCACTGATGGCTCCAACTTG +
Preference number: 1 (lower is better)
Translates to: SHKFHFVNTLVSTRC*GFQNVAYPTDGSNL
Trigger: CAAGTTGGAGCCATCAGTGGGATACGCCACATTTTGGAAGCCCCAGCATCGTGTACTTACCAGTGTGTTCACAAAATGAAATTTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR CCA 90 bp TCAGTGCATTGGGAGGTTGAAGTTCTGAGTAACTCAAAGCAGTTTTaGAGCAGATGCAAAATTTCATGGGAAGAAGGCTCTACGGTTGCA +
Preference number: 1 (lower is better)
Translates to: SVHWEVEVLSNSKQF*SRCKISWEEGSTVA
Trigger: TGCAACCGTAGAGCCTTCTTCCCATGAAATTTTGCATCTGCTCCAAAACTGCTTTGAGTTACTCAGAACTTCAACCTCCCAATGCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 90 bp AAATATGTGAATGATGCAGGCTTCAAAGGTGATCAACGTTTCACATaGAGAACTCTGCTGAGATCATTGAACATTGTGCAAGTCCGGGGG +
Preference number: 1 (lower is better)
Translates to: KYVNDAGFKGDQRFT*RTLLRSLNIVQVRG
Trigger: CCCCCGGACTTGCACAATGTTCAATGATCTCAGCAGAGTTCTTCATGTGAAACGTTGATCACCTTTGAAGCCTGCATCATTCACATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 90 bp ATCTTTGACAAGGAATGCCTTCAGTGCATTGGGAGGTTGAAGTTCTaGGTAACTCAAAGCAGTTTTGGAGCAGATGCAAAATTTCATGGG +
Preference number: 1 (lower is better)
Translates to: IFDKECLQCIGRLKF*VTQSSFGADAKFHG
Trigger: CCCATGAAATTTTGCATCTGCTCCAAAACTGCTTTGAGTTACTCAGAACTTCAACCTCCCAATGCACTGAAGGCATTCCTTGTCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR GCA 90 bp GGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATATCGAAAAGCAGGAGTaGGCTTTCCTACCGGTCTCT +
Preference number: 2 (lower is better)
Translates to: GPTRKPGGSAPLEPLPVDIEKQE*AFLPVS
Trigger: AGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGAT...ATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326043.5
3UTR-3UTR TCA 90 bp GGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATCTGCCAGAGAAACAATaGAGCATGAAAAAGTACTAT +
Preference number: 2 (lower is better)
Translates to: GPTRKPGGSAPLEPLPVDLPEKQ*SMKKYY
Trigger: ATAGTACTTTTTCATGCTTCATTGTTTCTCTGGCAG...ATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326043.5
3UTR-3UTR GCA 90 bp TACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTATGCACCTGTTTACTTaGACACACCATAAATCGAAA +
Preference number: 2 (lower is better)
Translates to: YEKTRGLGSAGASARGFVMHLFT*THHKSK
Trigger: TTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCAT...AACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
3UTR-3UTR CCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTGAGCACTTATCAGGGTaGCTAGCTGGAATCGCGTGT +
Preference number: 2 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSEHLSG*LAGIAC
Trigger: ACACGCGATTCCAGCTAGCCACCCTGATAAGTGCTC...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTTCCTACCGGTCTCTATaGAACCCCCAGACAAGAGGC +
Preference number: 2 (lower is better)
Translates to: PLPVDLFREGESNIYFSSSYRSL*NPQTRG
Trigger: GCCTCTTGTCTGGGGGTTTCATAGAGACCGGTAGGA...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326043.5
3UTR-3UTR TCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACTGGGTTGAGAAGGAGTaGGGGTGGAGGTTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHWVEKE*GWRLEK
Trigger: TTTTTCCAACCTCCACCCTCACTCCTTCTCAACCCA...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGTGCGCAAGCCACCTCTaGTGCGCCATATTTGTCCGG +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLCASHL*CAIFVR
Trigger: CCGGACAAATATGGCGCATCAGAGGTGGCTTGCGCA...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp TGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTGAAGTCAGGGGTAGGTaGTTCTCCATGACTGCAAAT +
Preference number: 2 (lower is better)
Translates to: CTCLLAHTINRKAGVRFPEVRGR*FSMTAN
Trigger: ATTTGCAGTCATGGAGAACCACCTACCCCTGACTTC...AGGAAAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326043.5
3UTR-3UTR CCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACGAAGTCAGGGGTAGGTaGTTCTCCATGACTGCAAAT +
Preference number: 2 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHEVRGR*FSMTAN
Trigger: ATTTGCAGTCATGGAGAACCACCTACCCCTGACTTC...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGAACTCGAGCAGGGTGTaGGGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLNSSRV*GVCVCV
Trigger: CACACACACACACACACCCCACACCCTGCTCGAGTT...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR CAA 90 bp TTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTaGAGTCTTTCCAAGGGATCTTTAAGTCAGCCCCCATACACAGCC +
Preference number: 2 (lower is better)
Translates to: LKIGQRLGVLLVKVV*SLSKGSLSQPPYTA
Trigger: GGCTGTGTATGGGGGCTGACTTAAAGATCCCTTGGAAAGACTCAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCAGATTGGCAATCCATaGGCCAGACACCCATTCCCT +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLQIGNP*ARHPFP
Trigger: AGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACGATCAACGTTTCACATaGAGAACTCTGCTGAGATCA +
Preference number: 2 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHDQRFT*RTLLRS
Trigger: TGATCTCAGCAGAGTTCTTCATGTGAAACGTTGATC...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCGGCTCCTCTGTCTATaGATGGCTTTGCTCCTGATC +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLRLLCL*MALLLI
Trigger: GATCAGGAGCAAAGCCATCCATAGACAGAGGAGCCG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGAGGTTGATGCAGGCTTaGTTGTGGAAGGTTCATGAG +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLRLMQA*LWKVHE
Trigger: CTCATGAACCTTCCACAATCAAGCCTGCATCAACCT...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGTCACACCCAGAAGGTTaGTGCAGGCTTGATTGTGGA +
Preference number: 2 (lower is better)
Translates to: LNSTQLYFPSNPGLICHESHPEG*CRLDCG
Trigger: TCCACAATCAAGCCTGCATCAACCTTCTGGGTGTGA...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR GCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCTCTTTACCGTTCAATaGATATGTGCGCAAGCCACC +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLLFTVQ*ICAQAT
Trigger: GGTGGCTTGCGCACATATGCATTGAACGGTAAAGAG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR GCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGATCTTTGACAAGGAATaGCTTCAGTGCATTGGGAGG +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLIFDKE*LQCIGR
Trigger: CCTCCCAATGCACTGAAGGCATTCCTTGTCAAAGAT...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR GCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGAGAAGTGTAGGGCCATaGTCAGGAAGCCTAGTTCCA +
Preference number: 2 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRRSVGP*SGSLVP
Trigger: TGGAACTAGGCTTCCTGAGCATGGCCCTACACTTCT...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTATGCCTTCAGTGCATTaGGAGGTTGAAGTTCTGAGT +
Preference number: 2 (lower is better)
Translates to: SGLANKKISVCKRRRKNSMPSVH*EVEVLS
Trigger: ACTCAGAACTTCAACCTCCCAATGCACTGAAGGCAT...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCACCAGTTCATGAACTaGAGGGGAAGAAGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLHQFMN*RGRRRK
Trigger: TTTTCTTCTTCTTCCCCTTCAGTTCATGAACTGGTG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR GCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGTGGAACTCGGCACGCTaGAAGTCTATAACATTTCAC +
Preference number: 2 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEWNSAR*KSITFH
Trigger: GTGAAATGTTATAGACTTGCAGCGTGCCGAGTTCCA...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGATGAACACCAGTTCATaGACTGAAGGGGAAGAAGAA +
Preference number: 2 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEMNTSS*TEGEEE
Trigger: TTCTTCTTCCCCTTCAGTTCATGAACTGGTGTTCAT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCCTATAATTTCACCCTaGATTACTGTCTCCCTATTC +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLPIISP*ITVSLF
Trigger: GAATAGGGAGACAGTAATTCAGGGTGAAATTATAGG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR GCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGAAGGAATGCCTTCAGTaGATTGGGAGGTTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRKECLQ*IGRLKF
Trigger: GAACTTCAACCTCCCAATGCACTGAAGGCATTCCTT...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTCTAAACTCTCAGATTTaGCATCACAAGGCCAAAACT +
Preference number: 2 (lower is better)
Translates to: SGLANKKISVCKRRRKNSLNSQI*HHKAKT
Trigger: AGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAG...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR CAA 90 bp ACACTTGACTTCAAGCTCATGAGGGGAGGTTTACTATTAAGACTTTaGTTAAGCAAAATTAAGTGTGGATTCAGGAGCCTGTCTAAACTA +
Preference number: 2 (lower is better)
Translates to: TLDFKLMRGGLLLRL*LSKIKCGFRSLSKL
Trigger: TAGTTTAGACAGGCTCCTGAATCCACACTTAATTTTGCTTAACAAAAGTCTTAATAGTAAACCTCCCCTCATGAGCTTGAAGTCAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGCACACACACAGAAAATaGACACCAGTTCATGAACTG +
Preference number: 2 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRHTHRK*TPVHEL
Trigger: CAGTTCATGAACTGGTGTTCATTTTCTGTGTGTGTG...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGAGAGAAGTTCTCCACTaGATATTCACGGTGAAATAT +
Preference number: 2 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLREVLH*IFTVKY
Trigger: ATATTTCACCGTGAATATTCAGTGGAGAACTTCTCT...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR TCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGAAGCTCAATCTCACATaGAGAACTCAGGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRKLNLT*RTQEKK
Trigger: TTTCTTCTCCTGAGTTCTTCATGTGAGATTGAGCTT...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGAGATGCAAAATTTCATaGGAAGAAGGCTCTACGGTT +
Preference number: 2 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRRCKIS*EEGSTV
Trigger: AACCGTAGAGCCTTCTTCCCATGAAATTTTGCATCT...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTAACTCAAAGCAGTTTTaGAGCAGATGCAAAATTTCA +
Preference number: 2 (lower is better)
Translates to: SGLANKKISVCKRRRKNSNSKQF*SRCKIS
Trigger: TGAAATTTTGCATCTGCTCCAAAACTGCTTTGAGTT...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGCCCCTCTTAATACTTTaGTTTTCAATACAGTCAGTG +
Preference number: 2 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEPLLIL*FSIQSV
Trigger: CACTGACTGTATTGAAAACCAAAGTATTAAGAGGGG...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGCAGGAATCCTTCCACTaGAGAAAAGGATGCATTTTA +
Preference number: 2 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRQESFH*RKGCIL
Trigger: TAAAATGCATCCTTTTCTCCAGTGGAAGGATTCCTG...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGTACCAAGGGCAATTATaGCTCAACTCATTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRYQGQL*LNSFEN
Trigger: GTTTTCAAATGAGTTGAGCCATAATTGCCCTTGGTA...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR CCA 72 bp AAAACAGCCACCACCACCACAAACTCGAGCAGGGTGTaGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: KTATTTTNSSRV*GVCVCVCVCVV
Trigger: CACCACACACACACACACACACACACACACACCCCACACCCTGCTCGAGTTTGTGGTGGTGGTGGCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 72 bp ACGATGCTGGGGCTTCCAAAATGTGGCGTATCCCACTaGTGGCTCCAACTTGCGAGTGGGCTCAGTTCTGTA +
Preference number: 3 (lower is better)
Translates to: TMLGLPKCGVSH*WLQLASGLSSV
Trigger: TACAGAACTGAGCCCACTCGCAAGTTGGAGCCATCAGTGGGATACGCCACATTTTGGAAGCCCCAGCATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 72 bp CTTTACCGTTCAATGCATATGTGCGCAAGCCACCTCTaGTGCGCCATATTTGTCCGGCTCCTCTGTCTATGG +
Preference number: 3 (lower is better)
Translates to: LYRSMHMCASHL*CAIFVRLLCLW
Trigger: CCATAGACAGAGGAGCCGGACAAATATGGCGCATCAGAGGTGGCTTGCGCACATATGCATTGAACGGTAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 72 bp TCGAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATaGAACCCCCAGACAAGAGGCATAGTTAACTACTAC +
Preference number: 3 (lower is better)
Translates to: SKSRSALSYRSL*NPQTRGIVNYY
Trigger: GTAGTAGTTAACTATGCCTCTTGTCTGGGGGTTTCATAGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
3UTR GCA 72 bp TCCAAAATGTGGCGTATCCCACTGATGGCTCCAACTTaGGAGTGGGCTCAGTTCTGTAATTGGAATGAAAGG +
Preference number: 3 (lower is better)
Translates to: SKMWRIPLMAPT*EWAQFCNWNER
Trigger: CCTTTCATTCCAATTACAGAACTGAGCCCACTCGCAAGTTGGAGCCATCAGTGGGATACGCCACATTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 72 bp CACAAGGCCAAAACTCACAAGTCACACCCAGAAGGTTaGTGCAGGCTTGATTGTGGAAGGTTCATGAGGATT +
Preference number: 3 (lower is better)
Translates to: HKAKTHKSHPEG*CRLDCGRFMRI
Trigger: AATCCTCATGAACCTTCCACAATCAAGCCTGCATCAACCTTCTGGGTGTGACTTGTGAGTTTTGGCCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR CCA 72 bp TTTCATTTTGTGAACACACTGGTAAGTACACGATGCTaGGGCTTCCAAAATGTGGCGTATCCCACTGATGGC +
Preference number: 3 (lower is better)
Translates to: FHFVNTLVSTRC*GFQNVAYPTDG
Trigger: GCCATCAGTGGGATACGCCACATTTTGGAAGCCCCAGCATCGTGTACTTACCAGTGTGTTCACAAAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR CCA 72 bp ATGTGGCGTATCCCACTGATGGCTCCAACTTGCGAGTaGGCTCAGTTCTGTAATTGGAATGAAAGGAATTTT +
Preference number: 3 (lower is better)
Translates to: MWRIPLMAPTCE*AQFCNWNERNF
Trigger: AAAATTCCTTTCATTCCAATTACAGAACTGAGCCCACTCGCAAGTTGGAGCCATCAGTGGGATACGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 72 bp CTAGCAAGTTATGGAGAATTTCAGATTGGCAATCCATaGGCCAGACACCCATTCCCTCCCCAGTTTAAAACA +
Preference number: 3 (lower is better)
Translates to: LASYGEFQIGNP*ARHPFPPQFKT
Trigger: TGTTTTAAACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCATAACTTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CAA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGACTCTGCTGAGATCATaGAACATTGTGCAAGTCCGG +
Preference number: 3 (lower is better)
Translates to: LNSTQLYFPSNPGLICHETLLRS*NIVQVR
Trigger: CCGGACTTGCACAATGTTCAATGATCTCAGCAGAGT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CAA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTCTTTTAACGAGGTTGTaGGGCCCAGTTAAACTGTAC +
Preference number: 3 (lower is better)
Translates to: SGLANKKISVCKRRRKNSLLTRL*GPVKLY
Trigger: GTACAGTTTAACTGGGCCCAACAACCTCGTTAAAAG...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CAA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGACACTTTTAACGAGGTaGTTGGGCCCAGTTAAACTG +
Preference number: 3 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRTLLTR*LGPVKL
Trigger: CAGTTTAACTGGGCCCAACAACCTCGTTAAAAGTGT...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CAA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGTGTCTATGGATGGCTTaGCTCCTGATCAGAAGTGTA +
Preference number: 3 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRCLWMA*LLIRSV
Trigger: TACACTTCTGATCAGGAGCAAAGCCATCCATAGACA...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CAA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGCAGAGCATTCCACATTaGACAATGACCAAAAGCCAA +
Preference number: 3 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRQSIPH*TMTKSQ
Trigger: TTGGCTTTTGGTCATTGTCAAATGTGGAATGCTCTG...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CAA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCCTAGTTCCACTGTTTaGTTTTGTTTTTCCTACCAA +
Preference number: 3 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLPSSTV*FCFSYQ
Trigger: TTGGTAGGAAAAACAAAACAAAACAGTGGAACTAGG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR-3UTR CAA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGAAAACAGTGCTGGCTTaGTCTAACATTCTATTGGTG +
Preference number: 3 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEKTVLA*SNILLV
Trigger: CACCAATAGAATGTTAGACAAAGCCAGCACTGTTTT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
3UTR TCA 72 bp ATTTTGCCACACATTGTTTTCATTTACAGCTATGTCTaGCAAATGAGCACGTTTGACATCACTGATAAATGC +
Preference number: 3 (lower is better)
Translates to: ILPHIVFIYSYV*QMSTFDITDKC
Trigger: GCATTTATCAGTGATGTCAAACGTGCTCATTTGTCAGACATAGCTGTAAATGAAAACAATGTGTGGCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp ACACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGGGGCGCTTCTAGCTTaGGCGGCGGTGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: TPSRAYEKTRGLGSAGASGALLA*AAVAGP
Trigger: CGGGCCAGCCACCGCCGCGCAAGCTAGAAGCGCCCC...AGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp GGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATCCGCCCTGGAGCTGGTaGCTGTTGCTGATGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GPTRKPGGSAPLEPLPVDPPWSW*LLLMSA
Trigger: GGCGCTCATCAGCAACAGCCACCAGCTCCAGGGCGG...ATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp CACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCGAGCTGCACGGCGTaGTCATGGGGGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: HRLGPTRKPGGSAPLEPLPSCTA*SWGWRT
Trigger: TGTCCTCCACCCCCATGAGCACGCCGTGCAGCTCGG...CAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp TACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTTCCAGGTGCGCCTTCTaGTCGCTGCCCGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: YEKTRGLGSAGASARGFVSRCAF*SLPEPG
Trigger: CCCGGGCTCGGGCAGCGAGCAGAAGGCGCACCTGGA...AACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR TCA 90 bp TCACTGATAAATGCAACACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCCCGCGTCCTCGGGGCTaGAGCCCAGCGCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SLINATPSRAYEKTRGLGPRPRG*SPAPRG
Trigger: ACCCCGAGGCGCTGGGCTTCAGCCCCGAGGACGCGG...GCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTGTTGCATTTATCAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp AAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAACCATGGCCAGGGGACTaGTGGGCAGGTCGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KPGGSAPLEPLPVDLFREPWPGD*WAGRSC
Trigger: GCAACTCCGACCTGCCCACCAGTCCCCTGGCCATGG...TTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp GGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGAGGTGGTCGACTTaGTGCAGCAGCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GPTRKPGGSAPLEPLPVDLRWST*CSSWFF
Trigger: GAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAA...ATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp AAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAAGCTCGCGCACAGACATaGTCACCAGCTGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: KPGGSAPLEPLPVDLFREARAQT*SPAARR
Trigger: CCGACGAGCAGCTGGTGACCATGTCTGTGCGCGAGC...TTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp AAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAACTCCGCTGCGCGCTTTaGATAAGGAAGGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: KPGGSAPLEPLPVDLFRELRCAL*IRKGSP
Trigger: AGGCGAGCCCTTCCTTATGCAAAGCGCGCAGCGGAG...TTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp TCACTGATAAATGCAACACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCGGGCGGCGCGGGCCTTaGCACGGGGGAGTTAACACT +
Preference number: 4 (lower is better)
Translates to: SLINATPSRAYEKTRGLGGRRGP*HGGVNT
Trigger: AGTGTTAACTCCCCCGTGCCAAGGCCCGCGCCGCCC...GCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTGTTGCATTTATCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp ACACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTTGGAGCCTCTGCCCGTaGATTTGTTTAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TPSRAYEKTRGLGSAGASWSLCP*ICLGKG
Trigger: CCCCTTCCCTAAACAAATCCACGGGCAGAGGCTCCA...AGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTGGCGGCGGTGGTGGCTaGGGCGGCGAAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSGGGGG*GGEAGG
Trigger: TCCTCCAGCTTCGCCGCCGCAGCCACCACCGCCGCC...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp AATCGAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATGAAACCCCCAGACAACTGATGCCATTCTCCTaGCGCCGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NRKAGVRFPTGLYETPRQLMPFS*RRRRRR
Trigger: GCGGCGGCGGCGGCGGCGGCAGGAGAATGGCATCAG...TTGTCTGGGGGTTTCATAGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp AAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAAAGGACGGGTTGTCGCTaGTCGAGCCGTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: KPGGSAPLEPLPVDLFRERTGCR*SSRFLG
Trigger: TCCGAGAAAACGGCTCGAGCAGCGACAACCCGTCCT...TTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp TACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTCTCCGCTGGAGCCTCTaGCCGTGGATTTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: YEKTRGLGSAGASARGFVLRWSL*PWICLG
Trigger: CCCTAAACAAATCCACGGGCAGAGGCTCCAGCGGAG...AACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp AATCGAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATGAAACCCCCAGACAAGTCGGGTGGTGGTGGTaGCCGGCGGCGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: NRKAGVRFPTGLYETPRQVGWWW*PAAWWW
Trigger: CCACCACCACGCCGCCGGCCACCACCACCACCCGAC...TTGTCTGGGGGTTTCATAGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp CACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGGTAAGTACACGATGCTaGGGCTTCCAAAATGTGGCG +
Preference number: 4 (lower is better)
Translates to: HRLGPTRKPGGSAPLEPLVSTRC*GFQNVA
Trigger: CGCCACATTTTGGAAGCCCCAGCATCGTGTACTTAC...CAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp GGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATGAAGTCAGGGGTAGGTaGTTCTCCATGACTGCAAAT +
Preference number: 4 (lower is better)
Translates to: GPTRKPGGSAPLEPLPVDEVRGR*FSMTAN
Trigger: ATTTGCAGTCATGGAGAACCACCTACCCCTGACTTC...ATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326043.5
3UTR CAA 72 bp TGTGTGTGTGTGTGTGTGTGGTGTGTGCGTGCGGGTTaGTGTGTGTGTAGGGGGCCAAGGGGGCCAAACTCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVWCVRAG*CVCRGPRGPNS
Trigger: CGAGTTTGGCCCCCTTGGCCCCCTACACACACACAAACCCGCACGCACACACCACACACACACACACACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACCCGCGTCCTCGGGGCTaGAGCCCAGCGCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHPRPRG*SPAPRG
Trigger: ACCCCGAGGCGCTGGGCTTCAGCCCCGAGGACGCGG...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp TACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTTGGAGATCTCCTGCTTaGGGTGGTCGACTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: YEKTRGLGSAGASARGFVWRSPA*GGRLAA
Trigger: TGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCA...AACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTCTCCGCCAGATGGGCTaGAGGAGAGGGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSLRQMG*RRGASG
Trigger: CCCGCTGGCCCCTCTCCTGCAGCCCATCTGGCGGAG...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTTCCAGGTGCGCCTTCTaGTCGCTGCCCGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSSRCAF*SLPEPG
Trigger: CCCGGGCTCGGGCAGCGAGCAGAAGGCGCACCTGGA...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp TGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTGGCGGCGGTGGTGGCTaGGGCGGCGAAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: CTCLLAHTINRKAGVRFPGGGGG*GGEAGG
Trigger: TCCTCCAGCTTCGCCGCCGCAGCCACCACCGCCGCC...AGGAAAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp ACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATGAAACCCCCGCGGGTGAGCCAGCTTaGCGGGCTGGGGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: TINRKAGVRFPTGLYETPAGEPA*RAGALL
Trigger: TAGAAGCGCCCCAGCCCGGCAAGCTGGCTCACCCGC...GGGGGTTTCATAGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGATTTATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR TCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTTGGGTGGCCAGCGGGTaGGCCAGCTTGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSWVASG*ASLPGW
Trigger: CCAGCCCGGCAAGCTGGCTCACCCGCTGGCCACCCA...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp GCAATGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTCTCCGCCAGATGGGCTaGAGGAGAGGGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: AMHLFTCTHHKSKSRSALLRQMG*RRGASG
Trigger: CCCGCTGGCCCCTCTCCTGCAGCCCATCTGGCGGAG...AAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp TCACTGATAAATGCAACACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCAGGACGTGTCTCTGCTaGACCCTCTTGAAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SLINATPSRAYEKTRGLGRTCLC*TLLKRQ
Trigger: CTGCCGCTTCAAGAGGGTGCAGCAGAGACACGTCCT...GCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTGTTGCATTTATCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp TGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTTTGCGCGGCGGTGGCTaGCCCGAAACCTCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: CTCLLAHTINRKAGVRFPLRGGG*PETSER
Trigger: GCGCTCGGAGGTTTCGGGCCAGCCACCGCCGCGCAA...AGGAAAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp GCAATGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTCGCCGCTCCGCCAGATaGGCTGCAGGAGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AMHLFTCTHHKSKSRSALRRSAR*AAGEGP
Trigger: TGGCCCCTCTCCTGCAGCCCATCTGGCGGAGCGGCG...AAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTCCATGGCCAGGGGACTaGTGGGCAGGTCGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSPWPGD*WAGRSC
Trigger: GCAACTCCGACCTGCCCACCAGTCCCCTGGCCATGG...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp CGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTCCATCGAAGCCGCCCTaGAGCTGGTGGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RWSLCPWICLGKGSRISIPSKPP*SWWLLL
Trigger: CAGCAACAGCCACCAGCTCCAGGGCGGCTTCGATGG...AATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR TCA 90 bp TCACTGATAAATGCAACACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCTGTGGCGTATCCCACTaGTGGCTCCAACTTGCGAGT +
Preference number: 4 (lower is better)
Translates to: SLINATPSRAYEKTRGLGCGVSH*WLQLAS
Trigger: ACTCGCAAGTTGGAGCCATCAGTGGGATACGCCACA...GCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTGTTGCATTTATCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp TGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTAAGGGGGCACCGAGCTaGACGGCGTGCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: CTCLLAHTINRKAGVRFPKGAPS*TACSWG
Trigger: CCCCCATGAGCACGCCGTGCAGCTCGGTGCCCCCTT...AGGAAAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACAAGGGGGCACCGAGCTaGACGGCGTGCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHKGAPS*TACSWG
Trigger: CCCCCATGAGCACGCCGTGCAGCTCGGTGCCCCCTT...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTAAGCGGTCGTCGAAGTaGAGGCCGCCGGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSKRSSK*RPPAAW
Trigger: CCACGCCGCCGGCGGCCTGCACTTCGACGACCGCTT...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp TGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTGCCAGCTTGCCGGGCTaGGGCGCTTCTAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: CTCLLAHTINRKAGVRFPASLPG*GASSLR
Trigger: GCGCAAGCTAGAAGCGCCCCAGCCCGGCAAGCTGGC...AGGAAAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTTGGCCAGGGGACTGGTaGGCAGGTCGGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSWPGDW*AGRSCS
Trigger: TGAGCAACTCCGACCTGCCCACCAGTCCCCTGGCCA...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTGCGTGCTCATGGGGGTaGAGGACAGCGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSACSWG*RTASPR
Trigger: CCGGGGGCTCGCTGTCCTCCACCCCCATGAGCACGC...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTTGGGCGCCGAGAAGCTaGGGGAAGGGGGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSWAPRS*GKGAPS
Trigger: GCTCGGTGCCCCCTTCCCCCAGCTTCTCGGCGCCCA...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTCCATCGAAGCCGCCCTaGAGCTGGTGGCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSPSKPP*SWWLLL
Trigger: CAGCAACAGCCACCAGCTCCAGGGCGGCTTCGATGG...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTGCTCGCGCACAGACATaGTCACCAGCTGCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSARAQT*SPAARR
Trigger: CCGACGAGCAGCTGGTGACCATGTCTGTGCGCGAGC...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp AATCGAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATGAAACCCCCAGACAAAGTGCAAGGCAGAGGTaGAGCCCGACTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: NRKAGVRFPTGLYETPRQSARQR*SPTGGE
Trigger: CTCTCCTCCAGTCGGGCTGCACCTCTGCCTTGCACT...TTGTCTGGGGGTTTCATAGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACCCGCCCTGGAGCTGGTaGCTGTTGCTGATGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHPPWSW*LLLMSA
Trigger: GGCGCTCATCAGCAACAGCCACCAGCTCCAGGGCGG...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTGGGGCTCGGCTCCGCTaGAGCCTCTGCCCGTGGATT +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSGARLR*SLCPWI
Trigger: AATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCC...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326043.5
3UTR CAA 72 bp TGCATATGTGCGCAAGCCACCTCTGATGCGCCATATTaGTCCGGCTCCTCTGTCTATGGATGGCTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CICAQATSDAPY*SGSSVYGWLCS
Trigger: GGAGCAAAGCCATCCATAGACAGAGGAGCCGGACAAATATGGCGCATCAGAGGTGGCTTGCGCACATATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTTGGGTGGCCAGCGGGTaGGCCAGCTTGCCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSWVASG*ASLPGW
Trigger: CCAGCCCGGCAAGCTGGCTCACCCGCTGGCCACCCA...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp GCAATGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTCGCTCGCCGCTCCGCTaGGCGCTTTGCATAAGGAAG +
Preference number: 4 (lower is better)
Translates to: AMHLFTCTHHKSKSRSALRSPLR*ALCIRK
Trigger: CTTCCTTATGCAAAGCGCGCAGCGGAGCGGCGAGCG...AAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACCGCTCGCCGCTCCGCTaGGCGCTTTGCATAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHRSPLR*ALCIRK
Trigger: CTTCCTTATGCAAAGCGCGCAGCGGAGCGGCGAGCG...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCTGATGCCATTCTCCTaGCGCCGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLLMPFS*RRRRRR
Trigger: GCGGCGGCGGCGGCGGCGGCAGGAGAATGGCATCAG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTAGGACGTGTCTCTGCTaGACCCTCTTGAAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSRTCLC*TLLKRQ
Trigger: CTGCCGCTTCAAGAGGGTGCAGCAGAGACACGTCCT...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTTCCAGGACGTGTCTCTaGTGCACCCTCTTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSSRTCL*CTLLKR
Trigger: CCGCTTCAAGAGGGTGCAGCAGAGACACGTCCTGGA...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTAGCCTGGAGATCTCCTaGTTGAGGTGGTCGACTTGC +
Preference number: 4 (lower is better)
Translates to: RWSLCPWICLGKGSRISISLEIS*LRWSTC
Trigger: GCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCT...AATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp TGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTTGGCCAGGGGACTGGTaGGCAGGTCGGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: CTCLLAHTINRKAGVRFPWPGDW*AGRSCS
Trigger: TGAGCAACTCCGACCTGCCCACCAGTCCCCTGGCCA...AGGAAAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGGTCGGGTGGTGGTGGTaGCCGGCGGCGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLVGWWW*PAAWWW
Trigger: CCACCACCACGCCGCCGGCCACCACCACCACCCGAC...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp CGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTATCTCCTGCTTGAGGTaGTCGACTTGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWSLCPWICLGKGSRISIISCLR*STCCSS
Trigger: GCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGAT...AATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
3UTR CAA 72 bp GCCATATTTGTCCGGCTCCTCTGTCTATGGATGGCTTaGCTCCTGATCAGAAGTGTAGGGCCATGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: AIFVRLLCLWMA*LLIRSVGPCSG
Trigger: TCCTGAGCATGGCCCTACACTTCTGATCAGGAGCAAAGCCATCCATAGACAGAGGAGCCGGACAAATATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGAAGCGGTCGTCGAAGTaGAGGCCGCCGGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLKRSSK*RPPAAW
Trigger: CCACGCCGCCGGCGGCCTGCACTTCGACGACCGCTT...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATGAAACCCCCAGGTGGTCGACTTGCTaGAGCAGCTGGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TINRKAGVRFPTGLYETPRWSTC*SSWFFS
Trigger: GGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCT...GGGGGTTTCATAGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGATTTATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp TCACTGATAAATGCAACACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCTTTCTCGGAAGCCGCTaGTCACCAACTTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: SLINATPSRAYEKTRGLGFLGSR*SPTSRI
Trigger: AATACGAGAAGTTGGTGAGCAGCGGCTTCCGAGAAA...GCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTGTTGCATTTATCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp GAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATGAAACCCCCAGACAAGAGGATCGAAAAGCAGGAGTaGGCTTTCCTACCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EKQECAFLPVSMKPPDKRIEKQE*AFLPVS
Trigger: AGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGAT...CCTCTTGTCTGGGGGTTTCATAGAGACCGGTAGGAAAGCGCACTCCTGCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCGCCGCTCCGCCAGATaGGCTGCAGGAGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLRRSAR*AAGEGP
Trigger: TGGCCCCTCTCCTGCAGCCCATCTGGCGGAGCGGCG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACATGAGACGGCCGCACTaGCTGATGATGCGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHMRRPH*LMMRSV
Trigger: GACCGACCGCATCATCAGCCAGTGCGGCCGTCTCAT...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGGGGGCGCTTCTAGCTTaGGCGGCGGTGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRGALLA*AAVAGP
Trigger: CGGGCCAGCCACCGCCGCGCAAGCTAGAAGCGCCCC...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp GCAATGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCAGGACGTGTCTCTaGTGCACCCTCTTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: AMHLFTCTHHKSKSRSALSRTCL*CTLLKR
Trigger: CCGCTTCAAGAGGGTGCAGCAGAGACACGTCCTGGA...AAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp CGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTTAATGCACCTGTTTACTTaGACACACCATAAATCGAAA +
Preference number: 4 (lower is better)
Translates to: RENQGARLRWSLCPWICLMHLFT*THHKSK
Trigger: TTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCAT...TAAACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTGCCAGCTTGCCGGGCTaGGGCGCTTCTAGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSASLPG*GASSLR
Trigger: GCGCAAGCTAGAAGCGCCCCAGCCCGGCAAGCTGGC...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTATGAGACGGCCGCACTaGCTGATGATGCGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSMRRPH*LMMRSV
Trigger: GACCGACCGCATCATCAGCCAGTGCGGCCGTCTCAT...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGGCGTGCTCATGGGGGTaGAGGACAGCGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEACSWG*RTASPR
Trigger: CCGGGGGCTCGCTGTCCTCCACCCCCATGAGCACGC...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGTGGGCGCCGAGAAGCTaGGGGAAGGGGGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEWAPRS*GKGAPS
Trigger: GCTCGGTGCCCCCTTCCCCCAGCTTCTCGGCGCCCA...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTATCAGGGTGGCTAGCTaGAATCGCGTGTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSIRVAS*NRVSDS
Trigger: TGAGTCTGACACGCGATTCCAGCTAGCCACCCTGAT...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTCGGCTCCTCTGTCTATaGATGGCTTTGCTCCTGATC +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSRLLCL*MALLLI
Trigger: GATCAGGAGCAAAGCCATCCATAGACAGAGGAGCCG...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp GCAATGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATaGAACCCCCAGACAAGAGGC +
Preference number: 4 (lower is better)
Translates to: AMHLFTCTHHKSKSRSALSYRSL*NPQTRG
Trigger: GCCTCTTGTCTGGGGGTTTCATAGAGACCGGTAGGA...AAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTAGAAGTGTAGGGCCATaGTCAGGAAGCCTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSRSVGP*SGSLVP
Trigger: TGGAACTAGGCTTCCTGAGCATGGCCCTACACTTCT...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACATCTCCTGCTTGAGGTaGTCGACTTGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHISCLR*STCCSS
Trigger: GCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGAT...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACCGTGTCAGACTCACATaGAAAACTCGGGAGAGGACG +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHRVRLT*KTRERT
Trigger: CGTCCTCTCCCGAGTTTTTCATGTGAGTCTGACACG...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTGGAGTTAACACTTCATaGTTCTCGCCTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSGVNTS*FSPPLL
Trigger: CAGAAGAGGAGGCGAGAAGCATGAAGTGTTAACTCC...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGGCGGGTGAGCCAGCTTaGCGGGCTGGGGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRAGEPA*RAGALL
Trigger: TAGAAGCGCCCCAGCCCGGCAAGCTGGCTCACCCGC...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGCCGAGCTGCACGGCGTaGTCATGGGGGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEPSCTA*SWGWRT
Trigger: TGTCCTCCACCCCCATGAGCACGCCGTGCAGCTCGG...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTCTCTTTACCGTTCAATaGATATGTGCGCAAGCCACC +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSLFTVQ*ICAQAT
Trigger: GGTGGCTTGCGCACATATGCATTGAACGGTAAAGAG...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGGGGCGGCGCGGGCCTTaGCACGGGGGAGTTAACACT +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRGRRGP*HGGVNT
Trigger: AGTGTTAACTCCCCCGTGCCAAGGCCCGCGCCGCCC...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp GCAATGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTGGGGCTTCCAAAATGTaGCGTATCCCACTGATGGCT +
Preference number: 4 (lower is better)
Translates to: AMHLFTCTHHKSKSRSALGASKM*RIPLMA
Trigger: AGCCATCAGTGGGATACGCCACATTTTGGAAGCCCC...AAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTTTGCTAATCAGTATATaGGGCCAGCCTCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSLLISI*GQPPHF
Trigger: GAAGTGAGGAGGCTGGCCCCATATACTGATTAGCAA...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp AATCGAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATGAAACCCCCAGACAAGCTATGTCTGACAAATaGGCACGTTTGACATCACTG +
Preference number: 4 (lower is better)
Translates to: NRKAGVRFPTGLYETPRQAMSDK*ARLTSL
Trigger: CAGTGATGTCAAACGTGCTCATTTGTCAGACATAGC...TTGTCTGGGGGTTTCATAGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTAGTGCAAGGCAGAGGTaGAGCCCGACTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSSARQR*SPTGGE
Trigger: CTCTCCTCCAGTCGGGCTGCACCTCTGCCTTGCACT...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTCGCTCTCTACCTCTGTaGAAAGTGCAAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSRSLPL*KVQGRG
Trigger: ACCTCTGCCTTGCACTTTGCACAGAGGTAGAGAGCG...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTTGGGCAGGTCGGAGTTaGTCATTGCCAGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSWAGRS*SLPVLM
Trigger: CATCAGAACTGGCAATGAGCAACTCCGACCTGCCCA...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR TCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACAGGTTGATGCAGGCTTaGTTGTGGAAGGTTCATGAG +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHRLMQA*LWKVHE
Trigger: CTCATGAACCTTCCACAATCAAGCCTGCATCAACCT...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp TGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTGGAGTTAACACTTCATaGTTCTCGCCTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CTCLLAHTINRKAGVRFPGVNTS*FSPPLL
Trigger: CAGAAGAGGAGGCGAGAAGCATGAAGTGTTAACTCC...AGGAAAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp TGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTAAAATAGCGAAGTCCTaGGGAAAGACGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CTCLLAHTINRKAGVRFPKIAKS*GKTRQR
Trigger: TCTCTGCCTCGTCTTTCCCCAGGACTTCGCTATTTT...AGGAAAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR TCA 90 bp ACCATAAATCGAAAAGCAGGAGTGCGCTTTCCTACCGGTCTCTATGAAACCCCCATTTACAGCTATGTCTaGCAAATGAGCACGTTTGAC +
Preference number: 4 (lower is better)
Translates to: TINRKAGVRFPTGLYETPIYSYV*QMSTFD
Trigger: GTCAAACGTGCTCATTTGTCAGACATAGCTGTAAAT...GGGGGTTTCATAGAGACCGGTAGGAAAGCGCACTCCTGCTTTTCGATTTATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGCTCCGCTGCGCGCTTTaGATAAGGAAGGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRLRCAL*IRKGSP
Trigger: AGGCGAGCCCTTCCTTATGCAAAGCGCGCAGCGGAG...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGAGGACGGGTTGTCGCTaGTCGAGCCGTTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHERTGCR*SSRFLG
Trigger: TCCGAGAAAACGGCTCGAGCAGCGACAACCCGTCCT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTCTGGTAAGTACACGATaGTGGGGCTTCCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSLVSTR*WGFQNV
Trigger: CACATTTTGGAAGCCCCAGCATCGTGTACTTACCAG...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACATGCCTTCAGTGCATTaGGAGGTTGAAGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHMPSVH*EVEVLS
Trigger: ACTCAGAACTTCAACCTCCCAATGCACTGAAGGCAT...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp GCAATGCACCTGTTTACTTGCACACACCATAAATCGAAAAGCAGGAGTGCGCTTACTAGTATGGCAGGTTaGAAGCAATGCACCTGTTTA +
Preference number: 4 (lower is better)
Translates to: AMHLFTCTHHKSKSRSALTSMAG*KQCTCL
Trigger: TAAACAGGTGCATTGCTTTCAACCTGCCATACTAGT...AAGCGCACTCCTGCTTTTCGATTTATGGTGTGTGCAAGTAAACAGGTGCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR TCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACATGAACACCAGTTCATaGACTGAAGGGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHMNTSS*TEGEEE
Trigger: TTCTTCTTCCCCTTCAGTTCATGAACTGGTGTTCAT...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGTGGGCAGGTCGGAGTTaGTCATTGCCAGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLWAGRS*SLPVLM
Trigger: CATCAGAACTGGCAATGAGCAACTCCGACCTGCCCA...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGAGGTGGTCGACTTGCTaGAGCAGCTGGTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHERWSTC*SSWFFS
Trigger: GGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGAGCCTGGAGATCTCCTaGTTGAGGTGGTCGACTTGC +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHESLEIS*LRWSTC
Trigger: GCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTGGGGCTTCCAAAATGTaGCGTATCCCACTGATGGCT +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSGASKM*RIPLMA
Trigger: AGCCATCAGTGGGATACGCCACATTTTGGAAGCCCC...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTGAGCACTTATCAGGGTaGCTAGCTGGAATCGCGTGT +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSEHLSG*LAGIAC
Trigger: ACACGCGATTCCAGCTAGCCACCCTGATAAGTGCTC...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGAACTCGAGCAGGGTGTaGGGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHENSSRV*GVCVCV
Trigger: CACACACACACACACACCCCACACCCTGCTCGAGTT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGTGTGGCGTATCCCACTaGTGGCTCCAACTTGCGAGT +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRCGVSH*WLQLAS
Trigger: ACTCGCAAGTTGGAGCCATCAGTGGGATACGCCACA...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGTGGGTTGAGAAGGAGTaGGGGTGGAGGTTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLWVEKE*GWRLEK
Trigger: TTTTTCCAACCTCCACCCTCACTCCTTCTCAACCCA...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACTTTCTGGGGATAGCATaGTCTGAAATCATTACTAGC +
Preference number: 4 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHFLGIA*SEIITS
Trigger: GCTAGTAATGATTTCAGATCATGCTATCCCCAGAAA...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGCGCTCTCTACCTCTGTaGAAAGTGCAAGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHERSLPL*KVQGRG
Trigger: ACCTCTGCCTTGCACTTTGCACAGAGGTAGAGAGCG...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTTCTCGCCTCCTCTTCTaGTTGGCTCTCTTTATTATT +
Preference number: 4 (lower is better)
Translates to: PLPVDLFREGESNIYFSSSRLLF*LALFII
Trigger: AATAATAAAGAGAGCCAAGCAGAAGAGGAGGCGAGA...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR GCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGCTGATGGCTCCAACTTaGGAGTGGGCTCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHELMAPT*EWAQFC
Trigger: ACAGAACTGAGCCCACTCGCAAGTTGGAGCCATCAG...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGGCTCCAACTTGCGAGTaGGCTCAGTTCTGTAATTGG +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLAPTCE*AQFCNW
Trigger: CCAATTACAGAACTGAGCCCACTCGCAAGTTGGAGC...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGTTGAGGTGGTCGACTTaGTGCAGCAGCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRLRWST*CSSWFF
Trigger: GAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAA...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCTGGTAAGTACACGATaGTGGGGCTTCCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLLVSTR*WGFQNV
Trigger: CACATTTTGGAAGCCCCAGCATCGTGTACTTACCAG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGTCACACCCAGAAGGTTaGTGCAGGCTTGATTGTGGA +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRSHPEG*CRLDCG
Trigger: TCCACAATCAAGCCTGCATCAACCTTCTGGGTGTGA...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGGAAGTCAAGAACACTTaGCTTCAAGCTCATGAGGGG +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEEVKNT*LQAHEG
Trigger: CCCCTCATGAGCTTGAAGTCAAGTGTTCTTGACTTC...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTTGGAACTCGGCACGCTaGAAGTCTATAACATTTCAC +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSWNSAR*KSITFH
Trigger: GTGAAATGTTATAGACTTGCAGCGTGCCGAGTTCCA...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGAAAATAGCGAAGTCCTaGGGAAAGACGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEKIAKS*GKTRQR
Trigger: TCTCTGCCTCGTCTTTCCCCAGGACTTCGCTATTTT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGGTAAGTACACGATGCTaGGGCTTCCAAAATGTGGCG +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRVSTRC*GFQNVA
Trigger: CGCCACATTTTGGAAGCCCCAGCATCGTGTACTTAC...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGTTTCTCGGAAGCCGCTaGTCACCAACTTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRFLGSR*SPTSRI
Trigger: AATACGAGAAGTTGGTGAGCAGCGGCTTCCGAGAAA...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGAAGGAATGCCTTCAGTaGATTGGGAGGTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEKECLQ*IGRLKF
Trigger: GAACTTCAACCTCCCAATGCACTGAAGGCATTCCTT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGATCTTTGACAAGGAATaGCTTCAGTGCATTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEIFDKE*LQCIGR
Trigger: CCTCCCAATGCACTGAAGGCATTCCTTGTCAAAGAT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR GCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTTTGGGGGCCCAAACCTaGTTATTATATTCAACTACC +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSLGAQT*LLYSTT
Trigger: GGTAGTTGAATATAATAAGCAGGTTTGGGCCCCCAA...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGGAAGTCAGGGGTAGGTaGTTCTCCATGACTGCAAAT +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSREVRGR*FSMTAN
Trigger: ATTTGCAGTCATGGAGAACCACCTACCCCTGACTTC...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTCCTATAATTTCACCCTaGATTACTGTCTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSPIISP*ITVSLF
Trigger: GAATAGGGAGACAGTAATTCAGGGTGAAATTATAGG...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGCAGCACCTTTGCATTTaGTTTTCTAAAGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEQHLCI*FSKVWG
Trigger: CCCCCAAACTTTAGAAAATCAAATGCAAAGGTGCTG...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTCAGGAATCCTTCCACTaGAGAAAAGGATGCATTTTA +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSQESFH*RKGCIL
Trigger: TAAAATGCATCCTTTTCTCCAGTGGAAGGATTCCTG...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGGATCAACGTTTCACATaGAGAACTCTGCTGAGATCA +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRDQRFT*RTLLRS
Trigger: TGATCTCAGCAGAGTTCTTCATGTGAAACGTTGATC...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGAAGCTCAATCTCACATaGAGAACTCAGGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEKLNLT*RTQEKK
Trigger: TTTCTTCTCCTGAGTTCTTCATGTGAGATTGAGCTT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTCAAGCTAGCAAGTTATaGAGAATTTCAGATTGGCAA +
Preference number: 4 (lower is better)
Translates to: SGLANKKISVCKRRRKNSQASKL*RISDWQ
Trigger: TTGCCAATCTGAAATTCTCCATAACTTGCTAGCTTG...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGAGATGCAAAATTTCATaGGAAGAAGGCTCTACGGTT +
Preference number: 4 (lower is better)
Translates to: LNSTQLYFPSNPGLICHERCKIS*EEGSTV
Trigger: AACCGTAGAGCCTTCTTCCCATGAAATTTTGCATCT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGTACCAAGGGCAATTATaGCTCAACTCATTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLYQGQL*LNSFEN
Trigger: GTTTTCAAATGAGTTGAGCCATAATTGCCCTTGGTA...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGCTAAACTCTCAGATTTaGCATCACAAGGCCAAAACT +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRLNSQI*HHKAKT
Trigger: AGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAG...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGAACTCAAAGCAGTTTTaGAGCAGATGCAAAATTTCA +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLNSKQF*SRCKIS
Trigger: TGAAATTTTGCATCTGCTCCAAAACTGCTTTGAGTT...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGAACCAGATATGTACTTaGAAATATGGAAGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLNQICT*KYGSKE
Trigger: CTCCTTACTTCCATATTTCCAAGTACATATCTGGTT...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR TCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGAGAGAAGTTCTCCACTaGATATTCACGGTGAAATAT +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRREVLH*IFTVKY
Trigger: ATATTTCACCGTGAATATTCAGTGGAGAACTTCTCT...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CCA 90 bp ATTTGTCATGTTTATGTTAAATCTTGTCAGGCCTTGCTAACAAGAAAATCTCGGCCCCTCTTAATACTTTaGTTTTCAATACAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ICHVYVKSCQALLTRKSRPLLIL*FSIQSV
Trigger: CACTGACTGTATTGAAAACCAAAGTATTAAGAGGGG...CCGAGATTTTCTTGTTAGCAAGGCCTGACAAGATTTAACATAAACATGACAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS GCA 90 bp GAGGGGCCAGCGGGCTGTGCTGGGTGGCCAGCGGGTGAGCCAGCTTaGCGGGCTGGGGCGCTTCTAGCTTGCGCGGCGGTGGCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: EGPAGCAGWPAGEPA*RAGALLACAAVAGP
Trigger: CGGGCCAGCCACCGCCGCGCAAGCTAGAAGCGCCCCAGCCCGGCAAGCTGGCTCACCCGCTGGCCACCCAGCACAGCCCGCTGGCCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS GCA 90 bp GTGCTCCCTCGCTCGCCCCGGCCCCTCCTTGCTCGCTCGCCTCCTTaGGCGCCGAGCCGGCGGCTTCAGGCTCGGGAAGATCCTCCGCGA +
Preference number: 5 (lower is better)
Translates to: VLPRSPRPLLARSPP*APSRRLQAREDPPR
Trigger: TCGCGGAGGATCTTCCCGAGCCTGAAGCCGCCGGCTCGGCGCGCAAGGAGGCGAGCGAGCAAGGAGGGGCCGGGGCGAGCGAGGGAGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS TCA 90 bp GGCCAGGGGACTGGTGGGCAGGTCGGAGTTGCTCATTGCCAGTTCTaGTGCCATTCTCCTGCCGCCGCCGCCGCCGCCGCCGCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: GQGTGGQVGVAHCQF*CHSPAAAAAAAAAP
Trigger: CGGAGCGGCGGCGGCGGCGGCGGCGGCGGCAGGAGAATGGCATCAGAACTGGCAATGAGCAACTCCGACCTGCCCACCAGTCCCCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS GCA 90 bp TGGCCAGCGGGTGAGCCAGCTTGCCGGGCTGGGGCGCTTCTAGCTTaGGCGGCGGTGGCTGGCCCGAAACCTCCGAGCGCGCTCACACAC +
Preference number: 5 (lower is better)
Translates to: WPAGEPACRAGALLA*AAVAGPKPPSALTH
Trigger: GTGTGTGAGCGCGCTCGGAGGTTTCGGGCCAGCCACCGCCGCGCAAGCTAGAAGCGCCCCAGCCCGGCAAGCTGGCTCACCCGCTGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS CCA 90 bp AGTAGTCTTCCAGGTGCGCCTTCTGCTCGCTGCCCGAGCCCGGGCTaGGCGCCGAGAAGCTGGGGGAAGGGGGCACCGAGCTGCACGGCG +
Preference number: 5 (lower is better)
Translates to: SSLPGAPSARCPSPG*APRSWGKGAPSCTA
Trigger: CGCCGTGCAGCTCGGTGCCCCCTTCCCCCAGCTTCTCGGCGCCCAGCCCGGGCTCGGGCAGCGAGCAGAAGGCGCACCTGGAAGACTACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS GCA 90 bp TGGGCAGGTCGGAGTTGCTCATTGCCAGTTCTGATGCCATTCTCCTaGCGCCGCCGCCGCCGCCGCCGCCGCTCCGCCAGATGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: WAGRSCSLPVLMPFS*RRRRRRRRSARWAA
Trigger: TGCAGCCCATCTGGCGGAGCGGCGGCGGCGGCGGCGGCGGCGGCAGGAGAATGGCATCAGAACTGGCAATGAGCAACTCCGACCTGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS-3UTR CAA 90 bp TACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTCGGATCACCTCCTCCTaGCTGACCCCGCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: YEKTRGLGSAGASARGFVRITSS*LTPRSC
Trigger: GCAGCTGCGCGGGGTCAGCAAGGAGGAGGTGATCCG...AACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CAA 90 bp TACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTGCTCCGCTGCGCGCTTaGCATAAGGAAGGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: YEKTRGLGSAGASARGFVAPLRA*HKEGLA
Trigger: GGCGAGCCCTTCCTTATGCAAAGCGCGCAGCGGAGC...AACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS CCA 90 bp TACGCGTCCCTCTCGCGCACCAGCCTGGAGATCTCCTGCTTGAGGTaGTCGACTTGCTGCAGCAGCTGGTTCTTCTCCGACTCCAGGACG +
Preference number: 5 (lower is better)
Translates to: YASLSRTSLEISCLR*STCCSSWFFSDSRT
Trigger: CGTCCTGGAGTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAGGGACGCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS-3UTR CAA 90 bp CACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCTTGAGGTGGTCGACTaGCTGCAGCAGCTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: HRLGPTRKPGGSAPLEPLLEVVD*LQQLVL
Trigger: AAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAG...CAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS TCA 90 bp CCTTGTACGCGTCCCTCTCGCGCACCAGCCTGGAGATCTCCTGCTTaGGGTGGTCGACTTGCTGCAGCAGCTGGTTCTTCTCCGACTCCA +
Preference number: 5 (lower is better)
Translates to: PCTRPSRAPAWRSPA*GGRLAAAAGSSPTP
Trigger: TGGAGTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAGGGACGCGTACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS GCA 90 bp TCGCGCACCAGCCTGGAGATCTCCTGCTTGAGGTGGTCGACTTGCTaGAGCAGCTGGTTCTTCTCCGACTCCAGGACGTGTCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SRTSLEISCLRWSTC*SSWFFSDSRTCLCC
Trigger: GCAGCAGAGACACGTCCTGGAGTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS GCA 90 bp CTCTCGCGCACCAGCCTGGAGATCTCCTGCTTGAGGTGGTCGACTTaGTGCAGCAGCTGGTTCTTCTCCGACTCCAGGACGTGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LSRTSLEISCLRWST*CSSWFFSDSRTCLC
Trigger: GCAGAGACACGTCCTGGAGTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS CCA 90 bp ACACCCGAGCCGGACCCCCGCGGAGCACTTATCAGGGTGGCTAGCTaGAATCGCGTGTCAGACTCACATGAAAAACTCGGGAGAGGACGG +
Preference number: 5 (lower is better)
Translates to: TPEPDPRGALIRVAS*NRVSDSHEKLGRGR
Trigger: CCGTCCTCTCCCGAGTTTTTCATGTGAGTCTGACACGCGATTCCAGCTAGCCACCCTGATAAGTGCTCCGCGGGGGTCCGGCTCGGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS CCA 90 bp GCAAGCCCACACCCGAGCCGGACCCCCGCGGAGCACTTATCAGGGTaGCTAGCTGGAATCGCGTGTCAGACTCACATGAAAAACTCGGGA +
Preference number: 5 (lower is better)
Translates to: ASPHPSRTPAEHLSG*LAGIACQTHMKNSG
Trigger: TCCCGAGTTTTTCATGTGAGTCTGACACGCGATTCCAGCTAGCCACCCTGATAAGTGCTCCGCGGGGGTCCGGCTCGGGTGTGGGCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp CGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTGGGGCGCTTCTAGCTaGCGCGGCGGTGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RWSLCPWICLGKGSRISIWGASS*RGGGWP
Trigger: GGGCCAGCCACCGCCGCGCAAGCTAGAAGCGCCCCA...AATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS GCA 90 bp TTCTCCTTGTACGCGTCCCTCTCGCGCACCAGCCTGGAGATCTCCTaGTTGAGGTGGTCGACTTGCTGCAGCAGCTGGTTCTTCTCCGAC +
Preference number: 5 (lower is better)
Translates to: FSLYASLSRTSLEIS*LRWSTCCSSWFFSD
Trigger: GTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAGGGACGCGTACAAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS-3UTR CAA 90 bp ACACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGGTCGGAGTTGCTCATaGCCAGTTCTGATGCCATTC +
Preference number: 5 (lower is better)
Translates to: TPSRAYEKTRGLGSAGASGRSCS*PVLMPF
Trigger: GAATGGCATCAGAACTGGCAATGAGCAACTCCGACC...AGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CAA 90 bp AAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAACCTCTGCCCGTGGATTaGTTTAGGGAAGGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: KPGGSAPLEPLPVDLFREPLPVD*FREGES
Trigger: CGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG...TTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CAA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTTGCTCGCTCGCCTCCTaGCGCGCCGAGCCGGCGGCT +
Preference number: 5 (lower is better)
Translates to: PLPVDLFREGESNIYFSSCSLAS*RAEPAA
Trigger: AGCCGCCGGCTCGGCGCGCAAGGAGGCGAGCGAGCA...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CAA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTCGGATCACCTCCTCCTaGCTGACCCCGCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSRITSS*LTPRSC
Trigger: GCAGCTGCGCGGGGTCAGCAAGGAGGAGGTGATCCG...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp AAACCAGGGGGCTCGGCTCCGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAAACTGATGGCTCCAACTaGCGAGTGGGCTCAGTTATG +
Preference number: 5 (lower is better)
Translates to: KPGGSAPLEPLPVDLFRETDGSN*RVGSVM
Trigger: CATAACTGAGCCCACTCGCAAGTTGGAGCCATCAGT...TTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCGGAGCCGAGCCCCCTGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CAA 90 bp CGCTGGAGCCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTGGAGCTGGTGGCTGTaGCTGATGAGCGCCTCGACC +
Preference number: 5 (lower is better)
Translates to: RWSLCPWICLGKGSRISIWSWWL*LMSAST
Trigger: GGTCGAGGCGCTCATCAGCAACAGCCACCAGCTCCA...AATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGGCTCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CAA 90 bp TCACTGATAAATGCAACACCGTCTAGGGCCTACGAGAAAACCAGGGGGCTCGGCCTGGAGATCTCCTGCTaGAGGTGGTCGACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SLINATPSRAYEKTRGLGLEISC*RWSTCC
Trigger: GCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAG...GCCGAGCCCCCTGGTTTTCTCGTAGGCCCTAGACGGTGTTGCATTTATCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CAA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTTGGAGCTGGTGGCTGTaGCTGATGAGCGCCTCGACC +
Preference number: 5 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSWSWWL*LMSAST
Trigger: GGTCGAGGCGCTCATCAGCAACAGCCACCAGCTCCA...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACGCTCCGCTGCGCGCTTaGCATAAGGAAGGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHAPLRA*HKEGLA
Trigger: GGCGAGCCCTTCCTTATGCAAAGCGCGCAGCGGAGC...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGTGGGGCGCTTCTAGCTaGCGCGGCGGTGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLWGASS*RGGGWP
Trigger: GGGCCAGCCACCGCCGCGCAAGCTAGAAGCGCCCCA...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTGTGGGCAGGTCGGAGTaGCTCATTGCCAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSVGRSE*LIASSD
Trigger: ATCAGAACTGGCAATGAGCAACTCCGACCTGCCCAC...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTCTTGAGGTGGTCGACTaGCTGCAGCAGCTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSLEVVD*LQQLVL
Trigger: AAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAG...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTGTGGGCAGGTCGGAGTaGCTCATTGCCAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: PLPVDLFREGESNIYFSSVGRSE*LIASSD
Trigger: ATCAGAACTGGCAATGAGCAACTCCGACCTGCCCAC...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CAA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTCTGGAGATCTCCTGCTaGAGGTGGTCGACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SGLANKKISVCKRRRKNSLEISC*RWSTCC
Trigger: GCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAG...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACACTCTGCTGAGATCATaGAACATTGTGCAAGTCCGG +
Preference number: 5 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHTLLRS*NIVQVR
Trigger: CCGGACTTGCACAATGTTCAATGATCTCAGCAGAGT...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp ATGGAGAATTTCAGATTGGCAATCCATGAGCCAGACACCCATTCCCTCCCCAGTCAGAGCATTCCACATTaGACAATGACCAAAAGCCAA +
Preference number: 5 (lower is better)
Translates to: MENFRLAIHEPDTHSLPSQSIPH*TMTKSQ
Trigger: TTGGCTTTTGGTCATTGTCAAATGTGGAATGCTCTG...ACTGGGGAGGGAATGGGTGTCTGGCTCATGGATTGCCAATCTGAAATTCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTACTGATGGCTCCAACTaGCGAGTGGGCTCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: SGLANKKISVCKRRRKNSTDGSN*RVGSVL
Trigger: CAGAACTGAGCCCACTCGCAAGTTGGAGCCATCAGT...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACCGCCTCCTCTTCTGCTaGGCTCTCTTTATTATTTTT +
Preference number: 5 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHRLLFC*ALFIIF
Trigger: AAAAATAATAAAGAGAGCCAAGCAGAAGAGGAGGCG...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACAAGAAGGCTCTACGGTaGCACTGTTTTGTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHKKALR*HCFVLN
Trigger: GTTTAGAACAAAACAGTGCAACCGTAGAGCCTTCTT...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp CCTCTGCCCGTGGATTTGTTTAGGGAAGGGGAGTCGAATATCTATTTTTCTTCTCGCCTCCTCTTCTGCTaGGCTCTCTTTATTATTTTT +
Preference number: 5 (lower is better)
Translates to: PLPVDLFREGESNIYFSSRLLFC*ALFIIF
Trigger: AAAAATAATAAAGAGAGCCAAGCAGAAGAGGAGGCG...AGAAGAAAAATAGATATTCGACTCCCCTTCCCTAAACAAATCCACGGGCAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS-3UTR CAA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGGGTCGGAGTTGCTCATaGCCAGTTCTGATGCCATTC +
Preference number: 5 (lower is better)
Translates to: LNSTQLYFPSNPGLICHEGRSCS*PVLMPF
Trigger: GAATGGCATCAGAACTGGCAATGAGCAACTCCGACC...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTTCTGATGCGCCATATTaGTCCGGCTCCTCTGTCTAT +
Preference number: 5 (lower is better)
Translates to: SGLANKKISVCKRRRKNSSDAPY*SGSSVY
Trigger: ATAGACAGAGGAGCCGGACAAATATGGCGCATCAGA...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp GGCAGACTAAACTCTCAGATTTGGCATCACAAGGCCAAAACTCACAAGTCACACTCCCCTCTTAATACTTaGGTTTTCAATACAGTCAGT +
Preference number: 5 (lower is better)
Translates to: GRLNSQIWHHKAKTHKSHSPLNT*VFNTVS
Trigger: ACTGACTGTATTGAAAACCAAAGTATTAAGAGGGGA...GTGTGACTTGTGAGTTTTGGCCTTGTGATGCCAAATCTGAGAGTTTAGTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp TCAGGCCTTGCTAACAAGAAAATCTCGGTGTGTAAGAGAAGAAGGAAAAATAGTCCCATTCTGGTATCTTaGACAAGGAATGCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: SGLANKKISVCKRRRKNSPILVS*TRNAFS
Trigger: ACTGAAGGCATTCCTTGTCAAAGATACCAGAATGGG...ACTATTTTTCCTTCTTCTCTTACACACCGAGATTTTCTTGTTAGCAAGGCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGTGTCTATGGATGGCTTaGCTCCTGATCAGAAGTGTA +
Preference number: 5 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLCLWMA*LLIRSV
Trigger: TACACTTCTGATCAGGAGCAAAGCCATCCATAGACA...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGCTTTTAACGAGGTTGTaGGGCCCAGTTAAACTGTAC +
Preference number: 5 (lower is better)
Translates to: LNSTQLYFPSNPGLICHELLTRL*GPVKLY
Trigger: GTACAGTTTAACTGGGCCCAACAACCTCGTTAAAAG...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp CTTAATTCTACACAACTATATTTTCCTTCCAATCCAGGCCTCATTTGTCATGAGACACTTTTAACGAGGTaGTTGGGCCCAGTTAAACTG +
Preference number: 5 (lower is better)
Translates to: LNSTQLYFPSNPGLICHETLLTR*LGPVKL
Trigger: CAGTTTAACTGGGCCCAACAACCTCGTTAAAAGTGT...CTCATGACAAATGAGGCCTGGATTGGAAGGAAAATATAGTTGTGTAGAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS-3UTR CAA 90 bp TGTCATTTAAAAATAGGTCAGCGCTTAGGAGTCCTACTAGTGAAGGTAGTTTTGCTAGTGAAGGTAGTTTaGAGTCTTTCCAAGGGATCT +
Preference number: 5 (lower is better)
Translates to: CHLKIGQRLGVLLVKVVLLVKVV*SLSKGS
Trigger: AGATCCCTTGGAAAGACTCAAAACTACCTTCACTAG...CAAAACTACCTTCACTAGTAGGACTCCTAAGCGCTGACCTATTTTTAAATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS GCA 72 bp CGCGGCGTCCCCCGCTCGCCGCTCCGCTGCGCGCTTTaGATAAGGAAGGGCTCGCCTCGCCGGCCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: RGVPRSPLRCAL*IRKGSPRRPGL
Trigger: CAGCCCGGGCCGGCGAGGCGAGCCCTTCCTTATGCAAAGCGCGCAGCGGAGCGGCGAGCGGGGGACGCCGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS CAA 72 bp GCGCGGCGTCCCCCGCTCGCCGCTCCGCTGCGCGCTTaGCATAAGGAAGGGCTCGCCTCGCCGGCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: ARRPPLAAPLRA*HKEGLASPARA
Trigger: AGCCCGGGCCGGCGAGGCGAGCCCTTCCTTATGCAAAGCGCGCAGCGGAGCGGCGAGCGGGGGACGCCGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS GCA 72 bp GCGGGCTGTGCTGGGTGGCCAGCGGGTGAGCCAGCTTaGCGGGCTGGGGCGCTTCTAGCTTGCGCGGCGGTG +
Preference number: 6 (lower is better)
Translates to: AGCAGWPAGEPA*RAGALLACAAV
Trigger: CACCGCCGCGCAAGCTAGAAGCGCCCCAGCCCGGCAAGCTGGCTCACCCGCTGGCCACCCAGCACAGCCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS CAA 72 bp TCGCTCGCCCCGGCCCCTCCTTGCTCGCTCGCCTCCTaGCGCGCCGAGCCGGCGGCTTCAGGCTCGGGAAGA +
Preference number: 6 (lower is better)
Translates to: SLAPAPPCSLAS*RAEPAASGSGR
Trigger: TCTTCCCGAGCCTGAAGCCGCCGGCTCGGCGCGCAAGGAGGCGAGCGAGCAAGGAGGGGCCGGGGCGAGCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS CAA 90 bp TGTGCTCCCTCGCTCGCCCCGGCCCCTCCTTGCTCGCTCGCCTCCTaGCGCGCCGAGCCGGCGGCTTCAGGCTCGGGAAGATCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: CAPSLAPAPPCSLAS*RAEPAASGSGRSSA
Trigger: CGCGGAGGATCTTCCCGAGCCTGAAGCCGCCGGCTCGGCGCGCAAGGAGGCGAGCGAGCAAGGAGGGGCCGGGGCGAGCGAGGGAGCACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS GCA 72 bp GGTGAGCCAGCTTGCCGGGCTGGGGCGCTTCTAGCTTaGGCGGCGGTGGCTGGCCCGAAACCTCCGAGCGCG +
Preference number: 6 (lower is better)
Translates to: GEPACRAGALLA*AAVAGPKPPSA
Trigger: CGCGCTCGGAGGTTTCGGGCCAGCCACCGCCGCGCAAGCTAGAAGCGCCCCAGCCCGGCAAGCTGGCTCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS CCA 72 bp CCGGGCTGGGGCGCTTCTAGCTTGCGCGGCGGTGGCTaGCCCGAAACCTCCGAGCGCGCTCACACACACACC +
Preference number: 6 (lower is better)
Translates to: PGWGASSLRGGG*PETSERAHTHT
Trigger: GGTGTGTGTGTGAGCGCGCTCGGAGGTTTCGGGCCAGCCACCGCCGCGCAAGCTAGAAGCGCCCCAGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS TCA 72 bp ACTGGTGGGCAGGTCGGAGTTGCTCATTGCCAGTTCTaGTGCCATTCTCCTGCCGCCGCCGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: TGGQVGVAHCQF*CHSPAAAAAAA
Trigger: GGCGGCGGCGGCGGCGGCGGCAGGAGAATGGCATCAGAACTGGCAATGAGCAACTCCGACCTGCCCACCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS CCA 72 bp GAGGACAGCGAGCCCCCGGCGATGAGACGGCCGCACTaGCTGATGATGCGGTCGGTCTCCACCGGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: EDSEPPAMRRPH*LMMRSVSTGSF
Trigger: AAAGGAACCGGTGGAGACCGACCGCATCATCAGCCAGTGCGGCCGTCTCATCGCCGGGGGCTCGCTGTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS GCA 72 bp TACGCGTCCCTCTCGCGCACCAGCCTGGAGATCTCCTaGTTGAGGTGGTCGACTTGCTGCAGCAGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: YASLSRTSLEIS*LRWSTCCSSWF
Trigger: GAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAGGGACGCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS CAA 72 bp GCGTCCCTCTCGCGCACCAGCCTGGAGATCTCCTGCTaGAGGTGGTCGACTTGCTGCAGCAGCTGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: ASLSRTSLEISC*RWSTCCSSWFF
Trigger: GAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAGGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS CAA 90 bp CCTCTCGCGCACCAGCCTGGAGATCTCCTGCTTGAGGTGGTCGACTaGCTGCAGCAGCTGGTTCTTCTCCGACTCCAGGACGTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: PLAHQPGDLLLEVVD*LQQLVLLRLQDVSL
Trigger: CAGAGACACGTCCTGGAGTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS CAA 90 bp TCCTTGTACGCGTCCCTCTCGCGCACCAGCCTGGAGATCTCCTGCTaGAGGTGGTCGACTTGCTGCAGCAGCTGGTTCTTCTCCGACTCC +
Preference number: 6 (lower is better)
Translates to: SLYASLSRTSLEISC*RWSTCCSSWFFSDS
Trigger: GGAGTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAGGGACGCGTACAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS TCA 72 bp CGTCCCTCTCGCGCACCAGCCTGGAGATCTCCTGCTTaGGGTGGTCGACTTGCTGCAGCAGCTGGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RPSRAPAWRSPA*GGRLAAAAGSS
Trigger: AGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAGGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS CCA 72 bp CTCTCGCGCACCAGCCTGGAGATCTCCTGCTTGAGGTaGTCGACTTGCTGCAGCAGCTGGTTCTTCTCCGAC +
Preference number: 6 (lower is better)
Translates to: LSRTSLEISCLR*STCCSSWFFSD
Trigger: GTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGTGCGCGAGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS CCA 72 bp CACCCGAGCCGGACCCCCGCGGAGCACTTATCAGGGTaGCTAGCTGGAATCGCGTGTCAGACTCACATGAAA +
Preference number: 6 (lower is better)
Translates to: HPSRTPAEHLSG*LAGIACQTHMK
Trigger: TTTCATGTGAGTCTGACACGCGATTCCAGCTAGCCACCCTGATAAGTGCTCCGCGGGGGTCCGGCTCGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS GCA 72 bp ACCAGCCTGGAGATCTCCTGCTTGAGGTGGTCGACTTaGTGCAGCAGCTGGTTCTTCTCCGACTCCAGGACG +
Preference number: 6 (lower is better)
Translates to: TSLEISCLRWST*CSSWFFSDSRT
Trigger: CGTCCTGGAGTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCTGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS CCA 72 bp CCGGACCCCCGCGGAGCACTTATCAGGGTGGCTAGCTaGAATCGCGTGTCAGACTCACATGAAAAACTCGGG +
Preference number: 6 (lower is better)
Translates to: PDPRGALIRVAS*NRVSDSHEKLG
Trigger: CCCGAGTTTTTCATGTGAGTCTGACACGCGATTCCAGCTAGCCACCCTGATAAGTGCTCCGCGGGGGTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393350.1
CDS GCA 72 bp CGGCGCGGGCCTTGGCACGGGGGAGTTAACACTTCATaGTTCTCGCCTCCTCTTCTGCTTGGCTCTCTTTAT +
Preference number: 6 (lower is better)
Translates to: RRGPWHGGVNTS*FSPPLLLGSLY
Trigger: ATAAAGAGAGCCAAGCAGAAGAGGAGGCGAGAAGCATGAAGTGTTAACTCCCCCGTGCCAAGGCCCGCGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326043.5
ENST00000393350.1
CDS GCA 72 bp AGCCTGGAGATCTCCTGCTTGAGGTGGTCGACTTGCTaGAGCAGCTGGTTCTTCTCCGACTCCAGGACGTGT +
Preference number: 6 (lower is better)
Translates to: SLEISCLRWSTC*SSWFFSDSRTC
Trigger: ACACGTCCTGGAGTCGGAGAAGAACCAGCTGCTGCAGCAAGTCGACCACCTCAAGCAGGAGATCTCCAGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326043.5
ENST00000393350.1
ENST00000569649.1
CDS TCA 72 bp ACGATGCTGGGGCTTCCAAAATGTGGCGTATCCCACTaGTGGCTCCAACTTGCGAGTGGGCTCAGTTATGAA +
Preference number: 6 (lower is better)
Translates to: TMLGLPKCGVSH*WLQLASGLSYE
Trigger: TTCATAACTGAGCCCACTCGCAAGTTGGAGCCATCAGTGGGATACGCCACATTTTGGAAGCCCCAGCATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326043.5
CDS CAA 72 bp TTCCAAAATGTGGCGTATCCCACTGATGGCTCCAACTaGCGAGTGGGCTCAGTTATGAAAAACTCGGGAGAG +
Preference number: 6 (lower is better)
Translates to: FQNVAYPTDGSN*RVGSVMKNSGE
Trigger: CTCTCCCGAGTTTTTCATAACTGAGCCCACTCGCAAGTTGGAGCCATCAGTGGGATACGCCACATTTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326043.5