RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAEL (Homo sapiens)

Ensembl gene IDs: ENSG00000143194

Ensembl transcript IDs: ENST00000367870.6, ENST00000367872.9, ENST00000447624.1, ENST00000487826.1, ENST00000491055.5, ENST00000622874.4

Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CAA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGGTAGTAAGAAGGAAGTaGGGCCTGTTACTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKVVRRK*GLLLFS
Trigger: TGAAAACAGTAACAGGCCCAACTTCCTTCTTACTAC...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
3UTR-3UTR CAA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTGTAGTAAGAAGGAAGTaGGGCCTGTTACTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPVVRRK*GLLLFS
Trigger: TGAAAACAGTAACAGGCCCAACTTCCTTCTTACTAC...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCCAGGGTCCTTTCCCTaGGCGGCCCTCCATTCTCGA +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLPGSFP*AALHSR
Trigger: TCGAGAATGGAGGGCCGCTCAGGGAAAGGACCCTGG...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTACAGAGGTAGGCGCCTaGGCACGCAGCCCGCAACTC +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPTEVGA*ARSPQL
Trigger: GAGTTGCGGGCTGCGTGCGCAGGCGCCTACCTCTGT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCGTGACCGAGAAACTTTaGCAGTCGCGGCAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLVTEKL*QSRQRA
Trigger: CGCCCGCTGCCGCGACTGCCAAAGTTTCTCGGTCAC...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622874.4
CDS-3UTR TCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGCCAGGGTCCTTTCCCTaGGCGGCCCTCCATTCTCGA +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKPGSFP*AALHSR
Trigger: TCGAGAATGGAGGGCCGCTCAGGGAAAGGACCCTGG...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGCCGGGGGCCAGCACGTaGCCGAGAAACTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKPGAST*PRNFGS
Trigger: ACTGCCAAAGTTTCTCGGTCACGTGCTGGCCCCCGG...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622874.4
CDS-3UTR GCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGAAGATTCCGGCTCGTaGCGCCTTGCGGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQEDSGS*RLAGEV
Trigger: CACCTCACCCGCAAGGCGGCACGAGCCGGAATCTTC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCCTTGCGGGTGAGGTaGGGGGAGAGCGCCGTCGCA +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEALRVR*GESAVA
Trigger: TGCGACGGCGCTCTCCCCCCACCTCACCCGCAAGGC...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS-3UTR TCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAGAAGCGCCCAGTCTaGGGAGCAGTAAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPQKRPV*GAVRDG
Trigger: GCCATCCCTTACTGCTCCTCAGACTGGGCGCTTCTG...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGGTCGCAGGTGCCAAGTaGTCTGATTGGCTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKVAGAK*SDWLGA
Trigger: CGCACCCAGCCAATCAGAGCACTTGGCACCTGCGAC...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGGGGATCTTCTCCTTTaGGCCGCCGGGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEGDLLL*AAGGQH
Trigger: GTGCTGGCCCCCGGCGGCCCAAAGGAGAAGATCCCC...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622874.4
CDS-3UTR TCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGAGGTTTCGCCCAGTCTaGGGAGCAGTAAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKRFRPV*GAVRDG
Trigger: GCCATCCCTTACTGCTCCTCAGACTGGGCGAAACCT...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS-3UTR GCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCGCTTTGGTACAAGCATaGCTGGCCTCCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLALVQA*LASSVV
Trigger: CACCACTGAGGAGGCCAGGCATGCTTGTACCAAAGC...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCTTACGGTTCGGCATaGCAGCGCGGTCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPPYGSA*QRGQTS
Trigger: GGAAGTTTGACCGCGCTGCCATGCCGAACCGTAAGG...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367870.6
ENST00000367872.9
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAGTAAGCATTCCGGCTaGCCTTACGGTTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLSKHSG*PYGSAW
Trigger: CCATGCCGAACCGTAAGGCCAGCCGGAATGCTTACT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367870.6
ENST00000367872.9
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAGGAGCAGTAAGGGATaGCATCAGCAACGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLRSSKG*HQQREP
Trigger: TGGCTCGCGTTGCTGATGCCATCCCTTACTGCTCCT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGAAGCGCTGTTCACAATaGGGAGGTAGCTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKKRCSQ*GGSSPW
Trigger: CCATGGCGAGCTACCTCCTCATTGTGAACAGCGCTT...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTAAGCGCTGTTCACAATaGGGAGGTAGCTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPKRCSQ*GGSSPW
Trigger: CCATGGCGAGCTACCTCCTCATTGTGAACAGCGCTT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGGGGAACAAACAGCCTaGGACTGGAAGATTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQGEQTA*DWKIPA
Trigger: AGCCGGAATCTTCCAGTCTCAGGCTGTTTGTTCCCC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS-3UTR TCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTGCCTCCTCAGTGGTGTaGAAACAGGTTTCGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPASSVV*KQVSPS
Trigger: ACTGGGCGAAACCTGTTTTCACACCACTGAGGAGGC...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS-3UTR GCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGCTTTGGTACAAGCATaGCTGGCCTCCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQALVQA*LASSVV
Trigger: CACCACTGAGGAGGCCAGGCATGCTTGTACCAAAGC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGGCTTTGGTACAAGCATaGCTGGCCTCCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKALVQA*LASSVV
Trigger: CACCACTGAGGAGGCCAGGCATGCTTGTACCAAAGC...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGACGCGCAGTCGCATTaGCCCGCGGGGGAACAAACA +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEDAQSH*PAGEQT
Trigger: TGTTTGTTCCCCCGCGGGGCAATGCGACTGCGCGTC...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS-3UTR CCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAAGGAGCAGTAAGGGATaGCATCAGCAACGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQRSSKG*HQQREP
Trigger: TGGCTCGCGTTGCTGATGCCATCCCTTACTGCTCCT...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACAGAAGCGCCCAGTCTaGGGAGCAGTAAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEQKRPV*GAVRDG
Trigger: GCCATCCCTTACTGCTCCTCAGACTGGGCGCTTCTG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGCGCGGTCAAACTTCCTaGCCTCAGACAGAACAAAGC +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKRGQTS*PQTEQS
Trigger: GCTTTGTTCTGTCTGAGGCCAGGAAGTTTGACCGCG...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367870.6
ENST00000367872.9
CDS-3UTR CCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTTGGTACAAGCATGCCTaGCCTCCTCAGTGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPWYKHA*PPQWCE
Trigger: TTCACACCACTGAGGAGGCCAGGCATGCTTGTACCA...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAATGGTACAAGCATGCCTaGCCTCCTCAGTGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQWYKHA*PPQWCE
Trigger: TTCACACCACTGAGGAGGCCAGGCATGCTTGTACCA...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGCCTCCTCAGTGGTGTaGAAACAGGTTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQASSVV*KQVSAS
Trigger: AGAAGCAGAAACCTGTTTTCACACCACTGAGGAGGC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCTCTTCCCCGAACGCTaGTGTTTTGGCCAGAAATTT +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLLFPER*CFGQKF
Trigger: AAATTTCTGGCCAAAACAGCAGCGTTCGGGGAAGAG...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACCTTACGGTTCGGCATaGCAGCGCGGTCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEPYGSA*QRGQTS
Trigger: GGAAGTTTGACCGCGCTGCCATGCCGAACCGTAAGG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367870.6
ENST00000367872.9
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAGGTGGCCAGTTCCCTaGGTTGGGATGAATAAATCT +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLRWPVP*VGMNKS
Trigger: AGATTTATTCATCCCAACCCAGGGAACTGGCCACCT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCGCTTCAAACACCAGTTaGCTCTGGTTCTATCATCAG +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLASNTS*LWFYHQ
Trigger: CTGATGATAGAACCAGAGTCAACTGGTGTTTGAAGC...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAACAAGGTCCTCTACAGTaGGAAGTTGTAGATCTTGCC +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQQGPLQ*EVVDLA
Trigger: GGCAAGATCTACAACTTCTCACTGTAGAGGACCTTG...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAATCTTGTAGTGGTACATaGGCCTCTGTGAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQSCSGT*ASVSWI
Trigger: AATCCAGCTCACAGAGGCTCATGTACCACTACAAGA...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCGGAGGTGAAACATTCTaGTTTGGTACAAGCATGCCT +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLGGETF*FGTSMP
Trigger: AGGCATGCTTGTACCAAAGCAGAATGTTTCACCTCC...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAACTCTTCCCCGAACGCTaGTGTTTTGGCCAGAAATTT +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQLFPER*CFGQKF
Trigger: AAATTTCTGGCCAAAACAGCAGCGTTCGGGGAAGAG...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAAGGTGGCCAGTTCCCTaGGTTGGGATGAATAAATCT +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQRWPVP*VGMNKS
Trigger: AGATTTATTCATCCCAACCCAGGGAACTGGCCACCT...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGAGGTGGCCAGTTCCCTaGGTTGGGATGAATAAATCT +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKRWPVP*VGMNKS
Trigger: AGATTTATTCATCCCAACCCAGGGAACTGGCCACCT...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACTTGCAGTAGATAGGTaGCCAGTTCCCTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQELAVDR*PVPWVG
Trigger: CCCAACCCAGGGAACTGGCCACCTATCTACTGCAAG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCGAACGCTGCTGTTTTaGCCAGAAATTTTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLRTLLF*PEIFAL
Trigger: TAGGGCAAAAATTTCTGGCCAAAACAGCAGCGTTCG...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGCTTCAAACACCAGTTaGCTCTGGTTCTATCATCAG +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQASNTS*LWFYHQ
Trigger: CTGATGATAGAACCAGAGTCAACTGGTGTTTGAAGC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTTGGCCAGAGAATTACTaGTGCAGTACGCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPWPENY*CSTQSS
Trigger: AGAAGATTGCGTACTGCATCAGTAATTCTCTGGCCA...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGTGGCCAGAGAATTACTaGTGCAGTACGCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKWPENY*CSTQSS
Trigger: AGAAGATTGCGTACTGCATCAGTAATTCTCTGGCCA...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAATGGCCAGAGAATTACTaGTGCAGTACGCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQWPENY*CSTQSS
Trigger: AGAAGATTGCGTACTGCATCAGTAATTCTCTGGCCA...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGTGAAAACAGGTTTCTaGTTCTCTGAGGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEVKTGF*FSEGPG
Trigger: CCCTGGGCCCTCAGAGAAGCAGAAACCTGTTTTCAC...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCGTGACTAGAATCACTTaGAGCCTGACAATGAAATCG +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLVTRIT*SLTMKS
Trigger: CGATTTCATTGTCAGGCTGCAAGTGATTCTAGTCAC...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCGATGCCTTTGCCATATaGTTCAAACACCAGTTGACT +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLDAFAI*FKHQLT
Trigger: AGTCAACTGGTGTTTGAAGCATATGGCAAAGGCATC...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCTTCTGGTAACGCCCTaGATCCAATACAACCATTTT +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLLLVTP*IQYNHF
Trigger: AAAATGGTTGTATTGGATGCAGGGCGTTACCAGAAG...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGTTGGCCAGAAATTTTTaGCCTAGATGGGTAGTCACC +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKLARNF*PRWVVT
Trigger: GGTGACTACCCATCTAGGGCAAAAATTTCTGGCCAA...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACGCGGTCAAACTTCCTaGCCTCAGACAGAACAAAGC +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQERGQTS*PQTEQS
Trigger: GCTTTGTTCTGTCTGAGGCCAGGAAGTTTGACCGCG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367870.6
ENST00000367872.9
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAATGGTACAAGCATGCCTaGCCTCCTCAGTGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEWYKHA*PPQWCE
Trigger: TTCACACCACTGAGGAGGCCAGGCATGCTTGTACCA...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAATTTTTGCCCTAGATaGGTAGTCACCAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLNFCPR*VVTNGC
Trigger: ACACCCATTGGTGACTACCCATCTAGGGCAAAAATT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGATCTTGCCTGATTTCTaGTGCCTTTGCCATATGCTT +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKILPDF*CLCHML
Trigger: AAGCATATGGCAAAGGCATCAGAAATCAGGCAAGAT...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTATCTTGCCTGATTTCTaGTGCCTTTGCCATATGCTT +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPILPDF*CLCHML
Trigger: AAGCATATGGCAAAGGCATCAGAAATCAGGCAAGAT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGTGACTAGAATCACTTaGAGCCTGACAATGAAATCG +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQVTRIT*SLTMKS
Trigger: CGATTTCATTGTCAGGCTGCAAGTGATTCTAGTCAC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGGATGCCTTTGCCATATaGTTCAAACACCAGTTGACT +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKDAFAI*FKHQLT
Trigger: AGTCAACTGGTGTTTGAAGCATATGGCAAAGGCATC...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAGTACGCAATCTTCTTaGAAACAGCTAAAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLSTQSS*KQLKHR
Trigger: TCTGTGCTTTAGCTGTTTGCAAGAAGATTGCGTACT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAACTTCTGGTAACGCCCTaGATCCAATACAACCATTTT +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQLLVTP*IQYNHF
Trigger: AAAATGGTTGTATTGGATGCAGGGCGTTACCAGAAG...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCTTCTGGTAACGCCCTaGATCCAATACAACCATTTT +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPLLVTP*IQYNHF
Trigger: AAAATGGTTGTATTGGATGCAGGGCGTTACCAGAAG...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCTGTAACACAGTTGCTTaGTTATGCCCACGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLCNTVA*LCPRSK
Trigger: TTTTGAACGTGGGCATAACCAAGCAACTGTGTTACA...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGTGTCACACTATTGCTaGCCTCATAATCTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQVSHYC*PHNLVV
Trigger: CACTACAAGATTATGAGGCCAGCAATAGTGTGACAC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTGTGTCACACTATTGCTaGCCTCATAATCTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPVSHYC*PHNLVV
Trigger: CACTACAAGATTATGAGGCCAGCAATAGTGTGACAC...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAACCAATACAACCATTTTaGGTGTCACACTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQPIQPF*VSHYCW
Trigger: CCAGCAATAGTGTGACACCCAAAATGGTTGTATTGG...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCAATACAACCATTTTaGGTGTCACACTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPPIQPF*VSHYCW
Trigger: CCAGCAATAGTGTGACACCCAAAATGGTTGTATTGG...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCATGGGTAGTCACCAATaGGTGTGTTTGATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLMGSHQ*VCLIFV
Trigger: AACAAAGATCAAACACACCCATTGGTGACTACCCAT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTAATTTTTGCCCTAGATaGGTAGTCACCAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPNFCPR*VVTNGC
Trigger: ACACCCATTGGTGACTACCCATCTAGGGCAAAAATT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCGTGAAGTGTCACAGTTaGAGAATTTGTGGATATTGC +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLVKCHS*RICGYC
Trigger: GCAATATCCACAAATTCTCCAACTGTGACACTTCAC...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACAAGGTCCTCTACAGTaGGAAGTTGTAGATCTTGCC +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEQGPLQ*EVVDLA
Trigger: GGCAAGATCTACAACTTCTCACTGTAGAGGACCTTG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAATCTTGTAGTGGTACATaGGCCTCTGTGAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQESCSGT*ASVSWI
Trigger: AATCCAGCTCACAGAGGCTCATGTACCACTACAAGA...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTTTAGAAGAGTTGAAATaGGAGAATCCTGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPLEELK*ENPELP
Trigger: TGGGAGTTCAGGATTCTCTCATTTCAACTCTTCTAA...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTACCAATGGGTGTGTTTaGTCTTTGTTCCTCATTAGA +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPTNGCV*SLFLIR
Trigger: TCTAATGAGGAACAAAGATCAAACACACCCATTGGT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGACCAATGGGTGTGTTTaGTCTTTGTTCCTCATTAGA +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKTNGCV*SLFLIR
Trigger: TCTAATGAGGAACAAAGATCAAACACACCCATTGGT...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAACCAATGGGTGTGTTTaGTCTTTGTTCCTCATTAGA +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQTNGCV*SLFLIR
Trigger: TCTAATGAGGAACAAAGATCAAACACACCCATTGGT...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCACAGTTGCTTGGTTATaGCCACGTTCAAAATTTGAA +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLTVAWL*PRSKFE
Trigger: TTCAAATTTTGAACGTGGGCATAACCAAGCAACTGT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTAGTACGCAATCTTCTTaGAAACAGCTAAAGCACAGA +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPSTQSS*KQLKHR
Trigger: TCTGTGCTTTAGCTGTTTGCAAGAAGATTGCGTACT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACTCTTCCCCGAACGCTaGTGTTTTGGCCAGAAATTT +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQELFPER*CFGQKF
Trigger: AAATTTCTGGCCAAAACAGCAGCGTTCGGGGAAGAG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTTGTAACACAGTTGCTTaGTTATGCCCACGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPCNTVA*LCPRSK
Trigger: TTTTGAACGTGGGCATAACCAAGCAACTGTGTTACA...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAATGGGTAGTCACCAATaGGTGTGTTTGATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQMGSHQ*VCLIFV
Trigger: AACAAAGATCAAACACACCCATTGGTGACTACCCAT...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGATGGGTAGTCACCAATaGGTGTGTTTGATCTTTGTT +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKMGSHQ*VCLIFV
Trigger: AACAAAGATCAAACACACCCATTGGTGACTACCCAT...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCAGTTGGAGAATTTGTaGATATTGCTGGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLQLENL*ILLEEL
Trigger: CAATTCTTCCAGCAATATCCACAAATTCTCCAACTG...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGTGAAGTGTCACAGTTaGAGAATTTGTGGATATTGC +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQVKCHS*RICGYC
Trigger: GCAATATCCACAAATTCTCCAACTGTGACACTTCAC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCTTCAAACACCAGTTaGCTCTGGTTCTATCATCAG +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEASNTS*LWFYHQ
Trigger: CTGATGATAGAACCAGAGTCAACTGGTGTTTGAAGC...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGAAAACTGTGGAAATCTaGCATAATACCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKKTVEI*HNTFLE
Trigger: CTCCAAGAAGGTATTATGGCAGATTTCCACAGTTTT...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAAAAACTGTGGAAATCTaGCATAATACCTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQKTVEI*HNTFLE
Trigger: CTCCAAGAAGGTATTATGGCAGATTTCCACAGTTTT...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTACAGTTGCTTGGTTATaGCCACGTTCAAAATTTGAA +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPTVAWL*PRSKFE
Trigger: TTCAAATTTTGAACGTGGGCATAACCAAGCAACTGT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGACAGTTGCTTGGTTATaGCCACGTTCAAAATTTGAA +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKTVAWL*PRSKFE
Trigger: TTCAAATTTTGAACGTGGGCATAACCAAGCAACTGT...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAATTGGCCAGAAATTTTTaGCCTAGATGGGTAGTCACC +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQELARNF*PRWVVT
Trigger: GGTGACTACCCATCTAGGGCAAAAATTTCTGGCCAA...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGGCCATAATACCTTCTTaGAGAGAATACTTAACACAG +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKAIIPS*REYLTQ
Trigger: CTGTGTTAAGTATTCTCTCCAAGAAGGTATTATGGC...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAATCGAAATCCTCGTaGAATTTCACCAGGATTTAT +
Preference number: 4 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLKSKSS*NFTRIY
Trigger: ATAAATCCTGGTGAAATTCCACGAGGATTTCGATTT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACGAACGCTGCTGTTTTaGCCAGAAATTTTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQERTLLF*PEIFAL
Trigger: TAGGGCAAAAATTTCTGGCCAAAACAGCAGCGTTCG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAGTTGGAGAATTTGTaGATATTGCTGGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPQLENL*ILLEEL
Trigger: CAATTCTTCCAGCAATATCCACAAATTCTCCAACTG...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGTGACTAGAATCACTTaGAGCCTGACAATGAAATCG +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEVTRIT*SLTMKS
Trigger: CGATTTCATTGTCAGGCTGCAAGTGATTCTAGTCAC...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR GCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGATGCCTTTGCCATATaGTTCAAACACCAGTTGACT +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEDAFAI*FKHQLT
Trigger: AGTCAACTGGTGTTTGAAGCATATGGCAAAGGCATC...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTAAATCGAAATCCTCGTaGAATTTCACCAGGATTTAT +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPKSKSS*NFTRIY
Trigger: ATAAATCCTGGTGAAATTCCACGAGGATTTCGATTT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACCAATACAACCATTTTaGGTGTCACACTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEPIQPF*VSHYCW
Trigger: CCAGCAATAGTGTGACACCCAAAATGGTTGTATTGG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAAATTTTTGCCCTAGATaGGTAGTCACCAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQENFCPR*VVTNGC
Trigger: ACACCCATTGGTGACTACCCATCTAGGGCAAAAATT...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGATTTGTGGATATTGCTaGAAGAATTGGAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKICGYC*KNWKCS
Trigger: AGAGCATTTCCAATTCTTCCAGCAATATCCACAAAT...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTATTTGTGGATATTGCTaGAAGAATTGGAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPICGYC*KNWKCS
Trigger: AGAGCATTTCCAATTCTTCCAGCAATATCCACAAAT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR TCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAATTAGAAGAGTTGAAATaGGAGAATCCTGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQELEELK*ENPELP
Trigger: TGGGAGTTCAGGATTCTCTCATTTCAACTCTTCTAA...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAATGTAACACAGTTGCTTaGTTATGCCCACGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQECNTVA*LCPRSK
Trigger: TTTTGAACGTGGGCATAACCAAGCAACTGTGTTACA...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCCATAATACCTTCTTaGAGAGAATACTTAACACAG +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEAIIPS*REYLTQ
Trigger: CTGTGTTAAGTATTCTCTCCAAGAAGGTATTATGGC...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAAAATCGAAATCCTCGTaGAATTTCACCAGGATTTAT +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEKSKSS*NFTRIY
Trigger: ATAAATCCTGGTGAAATTCCACGAGGATTTCGATTT...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CCA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAATTTGTGGATATTGCTaGAAGAATTGGAAATGCTCT +
Preference number: 4 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEICGYC*KNWKCS
Trigger: AGAGCATTTCCAATTCTTCCAGCAATATCCACAAAT...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS CCA 90 bp CTTCTCCTTTGGGCCGCCGGGGGCCAGCACGTGACCGAGAAACTTTaGCAGTCGCGGCAGCGGGCGGCGGGGCGGAGGCGCGGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LLLWAAGGQHVTEKL*QSRQRAAGRRRGRR
Trigger: CCGCCTCCCGCGCCTCCGCCCCGCCGCCCGCTGCCGCGACTGCCAAAGTTTCTCGGTCACGTGCTGGCCCCCGGCGGCCCAAAGGAGAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622874.4
CDS CCA 90 bp TCCGGCTGGCCTTACGGTTCGGCATGGCAGCGCGGTCAAACTTCCTaGCCTCAGACAGAACAAAGCACCGGCGCCCTCGCCGGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: SGWPYGSAWQRGQTS*PQTEQSTGALAGLP
Trigger: CGGGAGCCCGGCGAGGGCGCCGGTGCTTTGTTCTGTCTGAGGCCAGGAAGTTTGACCGCGCTGCCATGCCGAACCGTAAGGCCAGCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
CDS TCA 90 bp GGAAGCGACGCGCAGTCGCATTGCCCCGCGGGGGAACAAACAGCCTaGGACTGGAAGATTCCGGCTCGTGCCGCCTTGCGGGTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GSDAQSHCPAGEQTA*DWKIPARAALRVRW
Trigger: CCACCTCACCCGCAAGGCGGCACGAGCCGGAATCTTCCAGTCTCAGGCTGTTTGTTCCCCCGCGGGGCAATGCGACTGCGCGTCGCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS CCA 90 bp TTTCTTCCTCCCTCAGAAGCGCCCAGTCTGAGGAGCAGTAAGGGATaGCATCAGCAACGCGAGCCACAGGCAGGCCTCGTCGCCGTAGTT +
Preference number: 5 (lower is better)
Translates to: FLPPSEAPSLRSSKG*HQQREPQAGLVAVV
Trigger: AACTACGGCGACGAGGCCTGCCTGTGGCTCGCGTTGCTGATGCCATCCCTTACTGCTCCTCAGACTGGGCGCTTCTGAGGGAGGAAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367872.9
ENST00000622874.4
CDS CCA 90 bp GTTCGGGGATCTTCTCCTGCACGAAGAAATAGTAAGCATTCCGGCTaGCCTTACGGTTCGGCATGGCAGCGCGGTCAAACTTCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: VRGSSPARRNSKHSG*PYGSAWQRGQTSWP
Trigger: AGGCCAGGAAGTTTGACCGCGCTGCCATGCCGAACCGTAAGGCCAGCCGGAATGCTTACTATTTCTTCGTGCAGGAGAAGATCCCCGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
CDS CCA 90 bp GCACGAAGAAATAGTAAGCATTCCGGCTGGCCTTACGGTTCGGCATaGCAGCGCGGTCAAACTTCCTGGCCTCAGACAGAACAAAGCACC +
Preference number: 5 (lower is better)
Translates to: ARRNSKHSGWPYGSA*QRGQTSWPQTEQST
Trigger: GGTGCTTTGTTCTGTCTGAGGCCAGGAAGTTTGACCGCGCTGCCATGCCGAACCGTAAGGCCAGCCGGAATGCTTACTATTTCTTCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
CDS TCA 90 bp GTGAAAACAGGTTTCTGCTTCTCTGAGGGCCCAGGGTCCTTTCCCTaGGCGGCCCTCCATTCTCGAGCCATTTCTGCGTATTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VKTGFCFSEGPGSFP*AALHSRAISAYFSF
Trigger: AAAGGAGAAATACGCAGAAATGGCTCGAGAATGGAGGGCCGCTCAGGGAAAGGACCCTGGGCCCTCAGAGAAGCAGAAACCTGTTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCGACGCGCAGTCGCATaGCCCCGCGGGGGAACAAAC +
Preference number: 5 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLRRAVA*PRGGTN
Trigger: GTTTGTTCCCCCGCGGGGCAATGCGACTGCGCGTCG...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAACGGGGATCTTCTCCTTaGGGCCGCCGGGGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQRGSSP*GRRGPA
Trigger: TGCTGGCCCCCGGCGGCCCAAAGGAGAAGATCCCCG...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622874.4
CDS-3UTR CAA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCGTGACCGAGAAACTTaGGCAGTCGCGGCAGCGGGC +
Preference number: 5 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLRDRET*AVAAAG
Trigger: GCCCGCTGCCGCGACTGCCAAAGTTTCTCGGTCACG...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622874.4
CDS TCA 90 bp CCCCGCCAAGGCTCATTAATCACAGAAGAGTTGAAAGGGACACCTTaGTGTCATCTAGTACAACCCCTAGATGTTACACTCCCATTAGCG +
Preference number: 5 (lower is better)
Translates to: PRQGSLITEELKGTP*CHLVQPLDVTLPLA
Trigger: CGCTAATGGGAGTGTAACATCTAGGGGTTGTACTAGATGACATCAAGGTGTCCCTTTCAACTCTTCTGTGATTAATGAGCCTTGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491055.5
CDS CCA 90 bp CAACCCTTAGCTTCTGGTAACGCCCTGCATCCAATACAACCATTTTaGGTGTCACACTATTGCTGGCCTCATAATCTTGTAGTGGTACAT +
Preference number: 5 (lower is better)
Translates to: QPLASGNALHPIQPF*VSHYCWPHNLVVVH
Trigger: ATGTACCACTACAAGATTATGAGGCCAGCAATAGTGTGACACCCAAAATGGTTGTATTGGATGCAGGGCGTTACCAGAAGCTAAGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000491055.5
ENST00000622874.4
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGTGAAACATTCTGCTTaGGTACAAGCATGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQVKHSA*VQACLA
Trigger: GGCCAGGCATGCTTGTACCAAAGCAGAATGTTTCAC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAACCGAACGCTGCTGTTTaGGCCAGAAATTTTTGCCCT +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQPNAAV*ARNFCP
Trigger: AGGGCAAAAATTTCTGGCCAAAACAGCAGCGTTCGG...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCGAACGCTGCTGTTTaGGCCAGAAATTTTTGCCCT +
Preference number: 5 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPPNAAV*ARNFCP
Trigger: AGGGCAAAAATTTCTGGCCAAAACAGCAGCGTTCGG...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS GCA 90 bp TTCTTGCAAACAGCTAAAGCACAGAAGAGAATATCATTTTCTTCATaGCACTTGCACCTTTGGATCATCTTCTGGCACAGAGGAGGTGCT +
Preference number: 5 (lower is better)
Translates to: FLQTAKAQKRISFSS*HLHLWIIFWHRGGA
Trigger: AGCACCTCCTCTGTGCCAGAAGATGATCCAAAGGTGCAAGTGGCATGAAGAAAATGATATTCTCTTCTGTGCTTTAGCTGTTTGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491055.5
CDS-3UTR CAA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCTGCTTCAAACACCAGTaGACTCTGGTTCTATCATCA +
Preference number: 5 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLCFKHQ*TLVLSS
Trigger: TGATGATAGAACCAGAGTCAACTGGTGTTTGAAGCA...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGCAGTACGCAATCTTCTaGCAAACAGCTAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKQYAIF*QTAKAQ
Trigger: CTGTGCTTTAGCTGTTTGCAAGAAGATTGCGTACTG...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAACAGTACGCAATCTTCTaGCAAACAGCTAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQQYAIF*QTAKAQ
Trigger: CTGTGCTTTAGCTGTTTGCAAGAAGATTGCGTACTG...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS GCA 90 bp AAACAGCTAAAGCACAGAAGAGAATATCATTTTCTTCATGCCACTTaGACCTTTGGATCATCTTCTGGCACAGAGGAGGTGCTCAATAAA +
Preference number: 5 (lower is better)
Translates to: KQLKHRREYHFLHAT*TFGSSSGTEEVLNK
Trigger: TTTATTGAGCACCTCCTCTGTGCCAGAAGATGATCCAAAGGTGCAAGTGGCATGAAGAAAATGATATTCTCTTCTGTGCTTTAGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491055.5
CDS CCA 90 bp TCACCAGGATTTATAAAACTGTGGAAATCTGCCATAATACCTTCTTaGAGAGAATACTTAACACAGCCAATTTCACAAGGGAGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: SPGFIKLWKSAIIPS*REYLTQPISQGRKR
Trigger: GCGCTTCCTCCCTTGTGAAATTGGCTGTGTTAAGTATTCTCTCCAAGAAGGTATTATGGCAGATTTCCACAGTTTTATAAATCCTGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
ENST00000491055.5
ENST00000622874.4
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAATGCTTCAAACACCAGTaGACTCTGGTTCTATCATCA +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQCFKHQ*TLVLSS
Trigger: TGATGATAGAACCAGAGTCAACTGGTGTTTGAAGCA...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCCTTGAGAAATTTTTGTaGGTAGATCCCCACTACAAG +
Preference number: 5 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLLEKFL*VDPHYK
Trigger: CTTGTAGTGGGGATCTACCAACAAAAATTTCTCAAG...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAACTCCTTGAGAAATTTTaGTTGGTAGATCCCCACTAC +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQLLEKF*LVDPHY
Trigger: GTAGTGGGGATCTACCAACAAAAATTTCTCAAGGAG...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCTCCTTGAGAAATTTTaGTTGGTAGATCCCCACTAC +
Preference number: 5 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPLLEKF*LVDPHY
Trigger: GTAGTGGGGATCTACCAACAAAAATTTCTCAAGGAG...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGTTTTCTTCATGCCACTaGCACCTTGTGTTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKFSSCH*HLVLLE
Trigger: TTCTAGCAACACAAGGTGCAAGTGGCATGAAGAAAA...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGTCCAATACAACCATTTaGGGTGTCACACTATTGCTG +
Preference number: 5 (lower is better)
Translates to: QTLMIYPSYSQEAEQSLKSNTTI*GVTLLL
Trigger: CAGCAATAGTGTGACACCCAAAATGGTTGTATTGGA...CTTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAATCCAATACAACCATTTaGGGTGTCACACTATTGCTG +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQSNTTI*GVTLLL
Trigger: CAGCAATAGTGTGACACCCAAAATGGTTGTATTGGA...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAGTGAAGTGTCACAGTaGGAGAATTTGTGGATATTG +
Preference number: 5 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLSEVSQ*ENLWIL
Trigger: CAATATCCACAAATTCTCCAACTGTGACACTTCACT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAGTAGTAAGAAGGAAGTaGGGCCTGTTACTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQVVRRK*GLLLFS
Trigger: TGAAAACAGTAACAGGCCCAACTTCCTTCTTACTAC...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAACTTGAGAAATTTTTGTaGGTAGATCCCCACTACAAG +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQLEKFL*VDPHYK
Trigger: CTTGTAGTGGGGATCTACCAACAAAAATTTCTCAAG...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCATATTGCTGGAAGAATaGGAAATGCTCTCTAGTAAG +
Preference number: 5 (lower is better)
Translates to: LQTLMIYPSYSQEAEQSLILLEE*EMLSSK
Trigger: CTTACTAGAGAGCATTTCCAATTCTTCCAGCAATAT...GAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp ACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTAGTGAAGTGTCACAGTaGGAGAATTTGTGGATATTG +
Preference number: 5 (lower is better)
Translates to: TPNFNDIPIIQPGSRTIPSEVSQ*ENLWIL
Trigger: CAATATCCACAAATTCTCCAACTGTGACACTTCACT...AGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACAGTACGCAATCTTCTaGCAAACAGCTAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEQYAIF*QTAKAQ
Trigger: CTGTGCTTTAGCTGTTTGCAAGAAGATTGCGTACTG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp CCAAACTTTAATGATATACCCATCATACAGCCAGGAAGCAGAACAATCCCTCAAATATTGCTGGAAGAATaGGAAATGCTCTCTAGTAAG +
Preference number: 5 (lower is better)
Translates to: PNFNDIPIIQPGSRTIPQILLEE*EMLSSK
Trigger: CTTACTAGAGAGCATTTCCAATTCTTCCAGCAATAT...TTGAGGGATTGTTCTGCTTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAACTCCTTGAGAAATTTTaGTTGGTAGATCCCCACTAC +
Preference number: 5 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQELLEKF*LVDPHY
Trigger: GTAGTGGGGATCTACCAACAAAAATTTCTCAAGGAG...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAATTTTCTTCATGCCACTaGCACCTTGTGTTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEFSSCH*HLVLLE
Trigger: TTCTAGCAACACAAGGTGCAAGTGGCATGAAGAAAA...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAGTAGTAAGAAGGAAGTaGGGCCTGTTACTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEVVRRK*GLLLFS
Trigger: TGAAAACAGTAACAGGCCCAACTTCCTTCTTACTAC...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAAGTGAAGTGTCACAGTaGGAGAATTTGTGGATATTG +
Preference number: 5 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQESEVSQ*ENLWIL
Trigger: CAATATCCACAAATTCTCCAACTGTGACACTTCACT...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS-3UTR CAA 90 bp TTTGTTCATATAGGACTCCAAACTTTAATGATATACCCATCATACAGCCAGGAAATATTGCTGGAAGAATaGGAAATGCTCTCTAGTAAG +
Preference number: 5 (lower is better)
Translates to: FVHIGLQTLMIYPSYSQEILLEE*EMLSSK
Trigger: CTTACTAGAGAGCATTTCCAATTCTTCCAGCAATAT...TTCCTGGCTGTATGATGGGTATATCATTAAAGTTTGGAGTCCTATATGAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000622874.4
CDS CAA 90 bp TCTTCTCCTTTGGGCCGCCGGGGGCCAGCACGTGACCGAGAAACTTaGGCAGTCGCGGCAGCGGGCGGCGGGGCGGAGGCGCGGGAGGCG +
Preference number: 6 (lower is better)
Translates to: SSPLGRRGPARDRET*AVAAAGGGAEAREA
Trigger: CGCCTCCCGCGCCTCCGCCCCGCCGCCCGCTGCCGCGACTGCCAAAGTTTCTCGGTCACGTGCTGGCCCCCGGCGGCCCAAAGGAGAAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622874.4
CDS TCA 72 bp GGGATCTTCTCCTTTGGGCCGCCGGGGGCCAGCACGTaGCCGAGAAACTTTGGCAGTCGCGGCAGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: GIFSFGPPGAST*PRNFGSRGSGR
Trigger: CCGCCCGCTGCCGCGACTGCCAAAGTTTCTCGGTCACGTGCTGGCCCCCGGCGGCCCAAAGGAGAAGATCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622874.4
CDS CCA 72 bp TGGAAGATTCCGGCTCGTGCCGCCTTGCGGGTGAGGTaGGGGGAGAGCGCCGTCGCAGGTGCCAAGTGCTCT +
Preference number: 6 (lower is better)
Translates to: WKIPARAALRVR*GESAVAGAKCS
Trigger: AGAGCACTTGGCACCTGCGACGGCGCTCTCCCCCCACCTCACCCGCAAGGCGGCACGAGCCGGAATCTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS TCA 72 bp GCGCAGTCGCATTGCCCCGCGGGGGAACAAACAGCCTaGGACTGGAAGATTCCGGCTCGTGCCGCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: AQSHCPAGEQTA*DWKIPARAALR
Trigger: CCGCAAGGCGGCACGAGCCGGAATCTTCCAGTCTCAGGCTGTTTGTTCCCCCGCGGGGCAATGCGACTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS CAA 90 bp GCAGCCCGCAACTCTCGGCCAATCAGGAAGCGACGCGCAGTCGCATaGCCCCGCGGGGGAACAAACAGCCTGAGACTGGAAGATTCCGGC +
Preference number: 6 (lower is better)
Translates to: AARNSRPIRKRRAVA*PRGGTNSLRLEDSG
Trigger: GCCGGAATCTTCCAGTCTCAGGCTGTTTGTTCCCCCGCGGGGCAATGCGACTGCGCGTCGCTTCCTGATTGGCCGAGAGTTGCGGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS CCA 72 bp CCTTACGGTTCGGCATGGCAGCGCGGTCAAACTTCCTaGCCTCAGACAGAACAAAGCACCGGCGCCCTCGCC +
Preference number: 6 (lower is better)
Translates to: PYGSAWQRGQTS*PQTEQSTGALA
Trigger: GGCGAGGGCGCCGGTGCTTTGTTCTGTCTGAGGCCAGGAAGTTTGACCGCGCTGCCATGCCGAACCGTAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
CDS CCA 72 bp CCCTCAGAAGCGCCCAGTCTGAGGAGCAGTAAGGGATaGCATCAGCAACGCGAGCCACAGGCAGGCCTCGTC +
Preference number: 6 (lower is better)
Translates to: PSEAPSLRSSKG*HQQREPQAGLV
Trigger: GACGAGGCCTGCCTGTGGCTCGCGTTGCTGATGCCATCCCTTACTGCTCCTCAGACTGGGCGCTTCTGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367872.9
ENST00000622874.4
CDS CAA 72 bp AACTCTCGGCCAATCAGGAAGCGACGCGCAGTCGCATaGCCCCGCGGGGGAACAAACAGCCTGAGACTGGAA +
Preference number: 6 (lower is better)
Translates to: NSRPIRKRRAVA*PRGGTNSLRLE
Trigger: TTCCAGTCTCAGGCTGTTTGTTCCCCCGCGGGGCAATGCGACTGCGCGTCGCTTCCTGATTGGCCGAGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367870.6
CDS CCA 72 bp AAACAGGTTTCGCCCAGTCTGAGGAGCAGTAAGGGATaGCATCAGCAACGCGAGCCACAGGCAGGCCTCGTC +
Preference number: 6 (lower is better)
Translates to: KQVSPSLRSSKG*HQQREPQAGLV
Trigger: GACGAGGCCTGCCTGTGGCTCGCGTTGCTGATGCCATCCCTTACTGCTCCTCAGACTGGGCGAAACCTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367870.6
ENST00000447624.1
CDS CCA 72 bp AATAGTAAGCATTCCGGCTGGCCTTACGGTTCGGCATaGCAGCGCGGTCAAACTTCCTGGCCTCAGACAGAA +
Preference number: 6 (lower is better)
Translates to: NSKHSGWPYGSA*QRGQTSWPQTE
Trigger: TTCTGTCTGAGGCCAGGAAGTTTGACCGCGCTGCCATGCCGAACCGTAAGGCCAGCCGGAATGCTTACTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
CDS CCA 72 bp TCTTCTCCTGCACGAAGAAATAGTAAGCATTCCGGCTaGCCTTACGGTTCGGCATGGCAGCGCGGTCAAACT +
Preference number: 6 (lower is better)
Translates to: SSPARRNSKHSG*PYGSAWQRGQT
Trigger: AGTTTGACCGCGCTGCCATGCCGAACCGTAAGGCCAGCCGGAATGCTTACTATTTCTTCGTGCAGGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
CDS CAA 90 bp CCCCCGCCAAGGCTCATTAATCACAGAAGAGTTGAAAGGGACACCTaGATGTCATCTAGTACAACCCCTAGATGTTACACTCCCATTAGC +
Preference number: 6 (lower is better)
Translates to: PPPRLINHRRVERDT*MSSSTTPRCYTPIS
Trigger: GCTAATGGGAGTGTAACATCTAGGGGTTGTACTAGATGACATCAAGGTGTCCCTTTCAACTCTTCTGTGATTAATGAGCCTTGGCGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491055.5
CDS TCA 72 bp CAGCCAATTTCACAAGGGAGGAAGCGCTGTTCACAATaGGGAGGTAGCTCGCCATGGCTAAAAATGTTCAAA +
Preference number: 6 (lower is better)
Translates to: QPISQGRKRCSQ*GGSSPWLKMFK
Trigger: TTTGAACATTTTTAGCCATGGCGAGCTACCTCCTCATTGTGAACAGCGCTTCCTCCCTTGTGAAATTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
ENST00000491055.5
ENST00000622874.4
CDS TCA 72 bp TGGCCTCATAATCTTGTAGTGGTACATGAGCCTCTGTaGGCTGGATTCCAAAGAGAGTGGCCAGAGAATTAC +
Preference number: 6 (lower is better)
Translates to: WPHNLVVVHEPL*AGFQREWPENY
Trigger: GTAATTCTCTGGCCACTCTCTTTGGAATCCAGCTCACAGAGGCTCATGTACCACTACAAGATTATGAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
ENST00000491055.5
ENST00000622874.4
CDS CCA 72 bp GCTTCTGGTAACGCCCTGCATCCAATACAACCATTTTaGGTGTCACACTATTGCTGGCCTCATAATCTTGTA +
Preference number: 6 (lower is better)
Translates to: ASGNALHPIQPF*VSHYCWPHNLV
Trigger: TACAAGATTATGAGGCCAGCAATAGTGTGACACCCAAAATGGTTGTATTGGATGCAGGGCGTTACCAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000491055.5
ENST00000622874.4
CDS CAA 72 bp CCTAGATGTTACACTCCCATTAGCGATCAAAGTGTATaGTCTACAGGTTTCCTAACAGGAATTCCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: PRCYTPISDQSV*STGFLTGIPQA
Trigger: GGCCTGGGGAATTCCTGTTAGGAAACCTGTAGACAATACACTTTGATCGCTAATGGGAGTGTAACATCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491055.5
CDS CAA 90 bp AGTACAACCCCTAGATGTTACACTCCCATTAGCGATCAAAGTGTATaGTCTACAGGTTTCCTAACAGGAATTCCCCAGGCCTTTCACCAT +
Preference number: 6 (lower is better)
Translates to: STTPRCYTPISDQSV*STGFLTGIPQAFHH
Trigger: ATGGTGAAAGGCCTGGGGAATTCCTGTTAGGAAACCTGTAGACAATACACTTTGATCGCTAATGGGAGTGTAACATCTAGGGGTTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491055.5
CDS CCA 72 bp CATCCAATACAACCATTTTGGGTGTCACACTATTGCTaGCCTCATAATCTTGTAGTGGTACATGAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: HPIQPFWVSHYC*PHNLVVVHEPL
Trigger: CAGAGGCTCATGTACCACTACAAGATTATGAGGCCAGCAATAGTGTGACACCCAAAATGGTTGTATTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
ENST00000491055.5
ENST00000622874.4
CDS CAA 72 bp AATCCAAGTCTTAGAGGGCTCCTTGAGAAATTTTTGTaGGTAGATCCCCACTACAAGGTCCTCTACAGTGAG +
Preference number: 6 (lower is better)
Translates to: NPSLRGLLEKFL*VDPHYKVLYSE
Trigger: CTCACTGTAGAGGACCTTGTAGTGGGGATCTACCAACAAAAATTTCTCAAGGAGCCCTCTAAGACTTGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
ENST00000487826.1
ENST00000491055.5
ENST00000622874.4
CDS CAA 72 bp TCGAATCCAAGTCTTAGAGGGCTCCTTGAGAAATTTTaGTTGGTAGATCCCCACTACAAGGTCCTCTACAGT +
Preference number: 6 (lower is better)
Translates to: SNPSLRGLLEKF*LVDPHYKVLYS
Trigger: ACTGTAGAGGACCTTGTAGTGGGGATCTACCAACAAAAATTTCTCAAGGAGCCCTCTAAGACTTGGATTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
ENST00000487826.1
ENST00000491055.5
ENST00000622874.4
CDS TCA 72 bp GGCTCATTAATCACAGAAGAGTTGAAAGGGACACCTTaGTGTCATCTAGTACAACCCCTAGATGTTACACTC +
Preference number: 6 (lower is better)
Translates to: GSLITEELKGTP*CHLVQPLDVTL
Trigger: GAGTGTAACATCTAGGGGTTGTACTAGATGACATCAAGGTGTCCCTTTCAACTCTTCTGTGATTAATGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491055.5
CDS TCA 72 bp GTGTTTGATCTTTGTTCCTCATTAGAAGAGTTGAAATaGGAGAATCCTGAACTCCCAACCCTTAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: VFDLCSSLEELK*ENPELPTLSFW
Trigger: CCAGAAGCTAAGGGTTGGGAGTTCAGGATTCTCTCATTTCAACTCTTCTAATGAGGAACAAAGATCAAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000491055.5
ENST00000622874.4
CDS GCA 72 bp TGTAGATCTTGCCTGATTTCTGATGCCTTTGCCATATaGTTCAAACACCAGTTGACTCTGGTTCTATCATCA +
Preference number: 6 (lower is better)
Translates to: CRSCLISDAFAI*FKHQLTLVLSS
Trigger: TGATGATAGAACCAGAGTCAACTGGTGTTTGAAGCATATGGCAAAGGCATCAGAAATCAGGCAAGATCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
ENST00000487826.1
ENST00000491055.5
ENST00000622874.4
CDS CAA 72 bp AGGCTCATTAATCACAGAAGAGTTGAAAGGGACACCTaGATGTCATCTAGTACAACCCCTAGATGTTACACT +
Preference number: 6 (lower is better)
Translates to: RLINHRRVERDT*MSSSTTPRCYT
Trigger: AGTGTAACATCTAGGGGTTGTACTAGATGACATCAAGGTGTCCCTTTCAACTCTTCTGTGATTAATGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491055.5
CDS CCA 72 bp TTTGGGACATGTAAGGTGAGAGTGAAGTGTCACAGTTaGAGAATTTGTGGATATTGCTGGAAGAATTGGAAA +
Preference number: 6 (lower is better)
Translates to: FGTCKVRVKCHS*RICGYCWKNWK
Trigger: TTTCCAATTCTTCCAGCAATATCCACAAATTCTCCAACTGTGACACTTCACTCTCACCTTACATGTCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000491055.5
ENST00000622874.4
CDS CCA 72 bp TTTATAAAACTGTGGAAATCTGCCATAATACCTTCTTaGAGAGAATACTTAACACAGCCAATTTCACAAGGG +
Preference number: 6 (lower is better)
Translates to: FIKLWKSAIIPS*REYLTQPISQG
Trigger: CCCTTGTGAAATTGGCTGTGTTAAGTATTCTCTCCAAGAAGGTATTATGGCAGATTTCCACAGTTTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367870.6
ENST00000367872.9
ENST00000447624.1
ENST00000491055.5
ENST00000622874.4