RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAD2L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000116670

Ensembl transcript IDs: ENST00000235310.7, ENST00000376655.1, ENST00000376664.10, ENST00000376667.7, ENST00000376669.9, ENST00000376672.5, ENST00000376692.9, ENST00000445656.5, ENST00000456915.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTaGCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCC +
Preference number: 1 (lower is better)
Translates to: RNPRRLRSRGCGIPH*PPGGGILQADLSGP
Trigger: GGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR GCA 90 bp GACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTaGGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCA +
Preference number: 1 (lower is better)
Translates to: DSVGRRNPRRLRSRG*GIPHCPPGGGILQA
Trigger: TGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR TCA 90 bp CAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTaGGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAG +
Preference number: 1 (lower is better)
Translates to: QYLRQTVLAGGTPGG*EVEVAASLTALLGE
Trigger: CTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
3UTR-3UTR GCA 90 bp CCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGGCAGCCATGCAGCACTaGCCTAGGCGGGGATCCCCC +
Preference number: 2 (lower is better)
Translates to: PHCPPGGGILQADLSGPGAAMQH*PRRGSP
Trigger: GGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGC...CCCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR-3UTR TCA 90 bp GAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGTCCTCCAAGCAGACCTaGGCGGCCCCGGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: EPQEAEKSRLRHPSLPSWSSKQT*AAPGWG
Trigger: GCCCCAGCCCGGGGCCGCTCAGGTCTGCTTGGAGGA...CCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR CAA 90 bp AGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTaGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGC +
Preference number: 2 (lower is better)
Translates to: RQCWPAEPQEAEKSR*RHPSLPSWGRHPPS
Trigger: GCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR-3UTR TCA 90 bp CCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGGGATCCCCCAAAGTCTaGCAGTTTGGGCATCAGTGG +
Preference number: 2 (lower is better)
Translates to: PHCPPGGGILQADLSGPGGSPKV*QFGHQW
Trigger: CCACTGATGCCCAAACTGTCAGACTTTGGGGGATCC...CCCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR-3UTR GCA 90 bp CCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGAATCAGGGCAGCCATaGAGCACTGCCCTAGGCGGG +
Preference number: 2 (lower is better)
Translates to: PRRLRSRGCGIPHCPPGGESGQP*STALGG
Trigger: CCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC...TCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR-3UTR TCA 90 bp AGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGATCCTCCAAGCAGACCTaGGCGGCCCCGGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: STVFETDSVGRRNPRRLRSSKQT*AAPGWG
Trigger: GCCCCAGCCCGGGGCCGCTCAGGTCTGCTTGGAGGA...TCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
3UTR-3UTR GCA 90 bp AGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAGCAGCCATGCAGCACTaGCCTAGGCGGGGATCCCCC +
Preference number: 2 (lower is better)
Translates to: STVFETDSVGRRNPRRLRAAMQH*PRRGSP
Trigger: GGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGC...TCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
3UTR-3UTR TCA 90 bp GAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGATCCCCCAAAGTCTaGCAGTTTGGGCATCAGTGG +
Preference number: 2 (lower is better)
Translates to: EPQEAEKSRLRHPSLPSWGSPKV*QFGHQW
Trigger: CCACTGATGCCCAAACTGTCAGACTTTGGGGGATCC...CCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR-3UTR GCA 90 bp GAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCGCAGCCATGCAGCACTaGCCTAGGCGGGGATCCCCC +
Preference number: 2 (lower is better)
Translates to: ETTHSTVFETDSVGRRNPAAMQH*PRRGSP
Trigger: GGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGC...GGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
3UTR-3UTR GCA 90 bp AGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAGAATCAGGGCAGCCATaGAGCACTGCCCTAGGCGGG +
Preference number: 2 (lower is better)
Translates to: STVFETDSVGRRNPRRLRESGQP*STALGG
Trigger: CCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC...TCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
3UTR-3UTR GCA 90 bp GAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCTGCGGCATCCCTCACTaGCCTCCTGGGGGAGGCATC +
Preference number: 2 (lower is better)
Translates to: ETTHSTVFETDSVGRRNPCGIPH*PPGGGI
Trigger: GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCA...GGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
3UTR-3UTR CCA 90 bp ACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCAAAGTCTGACAGTTTaGGCATCAGTGGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: THSTVFETDSVGRRNPRRQSLTV*ASVGWQ
Trigger: CTGCCACCCCACTGATGCCCAAACTGTCAGACTTTG...CCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
3UTR-3UTR TCA 90 bp TTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCGGATCCCCCAAAGTCTaGCAGTTTGGGCATCAGTGG +
Preference number: 2 (lower is better)
Translates to: LKQLTAQYLRQTVLAGGTGSPKV*QFGHQW
Trigger: CCACTGATGCCCAAACTGTCAGACTTTGGGGGATCC...GGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
3UTR-3UTR CCA 90 bp CCAGCCCTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGGGCGATAAGAGCACTTaGAATCAGGGCAGCCATGCA +
Preference number: 2 (lower is better)
Translates to: PALGAPLLKQLTAQYLRQGDKST*NQGSHA
Trigger: TGCATGGCTGCCCTGATTCCAAGTGCTCTTATCGCC...CTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
3UTR CCA 72 bp GAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTaGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCC +
Preference number: 3 (lower is better)
Translates to: EKSRLRHPSLPS*GRHPPSRPERP
Trigger: GGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR TCA 72 bp AGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTaGGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTC +
Preference number: 3 (lower is better)
Translates to: RQTVLAGGTPGG*EVEVAASLTAL
Trigger: GAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR GCA 72 bp AGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTaGCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTG +
Preference number: 3 (lower is better)
Translates to: RRLRSRGCGIPH*PPGGGILQADL
Trigger: CAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
3UTR-3UTR CAA 90 bp GAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCCCAAAGTCTGACAGTTaGGGCATCAGTGGGGTGGCA +
Preference number: 3 (lower is better)
Translates to: ETDSVGRRNPRRLRSRGCPKSDS*GISGVA
Trigger: TGCCACCCCACTGATGCCCAAACTGTCAGACTTTGG...GCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGTCCTCCAAGCAGACCTaGGCGGCCCCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PHCPPGGGILQADLSGPGSSKQT*AAPGWG
Trigger: GCCCCAGCCCGGGGCCGCTCAGGTCTGCTTGGAGGA...CCCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGTGCCCGCACGGCTGCTaGGCTGCGCCCGCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: PHCPPGGGILQADLSGPGCPHGC*AAPAFV
Trigger: GACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCA...CCCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376672.5
CDS-3UTR TCA 90 bp CCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGTCCTCCAAGCAGACCTaGGCGGCCCCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PQEAEKSRLRHPSLPSWGSSKQT*AAPGWG
Trigger: GCCCCAGCCCGGGGCCGCTCAGGTCTGCTTGGAGGA...CCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCGGTGCCCGCACGGCTaGTGGGCTGCGCCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRRCPHG*WAAPAF
Trigger: AAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCACCG...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376672.5
CDS-3UTR GCA 90 bp AGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCCGGTGCCCGCACGGCTaGTGGGCTGCGCCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: RLRSRGCGIPHCPPGGGIRCPHG*WAAPAF
Trigger: AAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCACCG...GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376672.5
CDS-3UTR TCA 90 bp TCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTCTCGGCGCCGCTCGGTaGCGTTCACGGCGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: SGQPCSTALGGDPPKSDSLGAAR*RSRRSG
Trigger: ACCGGAGCGCCGTGAACGTCACCGAGCGGCGCCGAG...ACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR TCA 90 bp GAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCTCCTCCAAGCAGACCTaGGCGGCCCCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ETDSVGRRNPRRLRSRGCSSKQT*AAPGWG
Trigger: GCCCCAGCCCGGGGCCGCTCAGGTCTGCTTGGAGGA...GCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCGCAGCCATGCAGCACTaGCCTAGGCGGGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: AEPQEAEKSRLRHPSLPSAAMQH*PRRGSP
Trigger: GGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGC...GGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCTGCGGCATCCCTCACTaGCCTCCTGGGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: GRRNPRRLRSRGCGIPHCCGIPH*PPGGGI
Trigger: GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCA...GCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp AGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCCCCGAGTCTCCCAGCTaGTGGGGTGGGCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RLRSRGCGIPHCPPGGGIPESPS*WGGRWP
Trigger: CGGCCATCGCCCACCCCACCAGCTGGGAGACTCGGG...GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGTTCACGGCGCTCCGGTaGGTCCTAGCGCCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLFTALR*VLAPAP
Trigger: CGGGGCGGGCGCTAGGACCCACCGGAGCGCCGTGAA...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGCGCTACCGGGAGGAGTaGGCCTGCCTCGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLRYREE*ACLARC
Trigger: GCACCGGGCGAGGCAGGCCCACTCCTCCCGGTAGCG...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376672.5
3UTR CAA 72 bp TGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTaGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: WPAEPQEAEKSR*RHPSLPSWGRH
Trigger: ATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGACAGCGAGTCTGAGCTaGTGGACAGCAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PSLPSWGRHPPSRPERPRTASLS*WTAVEA
Trigger: AGCCTCCACTGCTGTCCATCAGCTCAGACTCGCTGT...CCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR TCA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCAGGGGCAGCCCACCTaGTGGACAGCAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRQGQPT*WTAVEA
Trigger: AGCCTCCACTGCTGTCCATCAGGTGGGCTGCCCCTG...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376672.5
CDS-3UTR GCA 90 bp CACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGCCTCCTTTGTCTaGCCCGCGCCCTCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: HLESGQPCSTALGGDPPKSASFV*PAPSRR
Trigger: CCGCCGCGAGGGCGCGGGGCAGACAAAGGAGGCAGA...CTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR GCA 90 bp GCACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAATCCCGCTACCGGCTCTaGGCTCGGTTCCCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: ALGIRAAMQHCPRRGSPKSRYRL*ARFPPE
Trigger: CTCGGGCGGGAACCGAGCGCAGAGCCGGTAGCGGGA...TTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376692.9
CDS-3UTR GCA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACTCCCGCTACCGGCTCTaGGCTCGGTTCCCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDSRYRL*ARFPPE
Trigger: CTCGGGCGGGAACCGAGCGCAGAGCCGGTAGCGGGA...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376692.9
CDS-3UTR GCA 90 bp CCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGAGGTGCCCCCTCAGCTaGCTTTATGAGCGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: PHCPPGGGILQADLSGPGRCPLS*LYERAL
Trigger: AAGAGCGCGCTCATAAAGGCAGCTGAGGGGGCACCT...CCCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCGAATCAGGGCAGCCATaGAGCACTGCCCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRRNPRRLRSRGCGIPHCESGQP*STALGG
Trigger: CCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC...GCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGCTGAGAAGTCGAGGTTaGGGCATCCCTCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: PSLPSWGRHPPSRPERPRLRSRG*GIPHCP
Trigger: AGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAG...CCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTGCCCGCACGGCTGCTaGGCTGCGCCCGCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: HLESGQPCSTALGGDPPKCPHGC*AAPAFV
Trigger: GACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCA...CTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376672.5
CDS-3UTR CCA 90 bp CCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGGGTGGCAGGACATCTaGACCGGCACGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: PSLPSWGRHPPSRPERPRGWQDI*TGTLYF
Trigger: GAAGTACAACGTGCCGGTCCAGATGTCCTGCCACCC...CCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGCAGTTTGGGCATCAGTaGGGTGGCAGGTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PQEAEKSRLRHPSLPSWGQFGHQ*GGRCPL
Trigger: GAGGGGGCACCTGCCACCCCACTGATGCCCAAACTG...CCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGGTGTCCTGGATATACTaGTTCAGCTCCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PHCPPGGGILQADLSGPGVSWIY*FSSGWQ
Trigger: CTGCCACCCGGAGCTGAATCAGTATATCCAGGACAC...CCCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGGGAACCCCAGGAGGCTaGGAAGTCGAGGTTGCGGCA +
Preference number: 4 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRGTPGG*EVEVAA
Trigger: TGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCC...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCGCAGCCATGCAGCACTaGCCTAGGCGGGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGAAMQH*PRRGSP
Trigger: GGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGC...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCGAATCAGGGCAGCCATaGAGCACTGCCCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: AEPQEAEKSRLRHPSLPSESGQP*STALGG
Trigger: CCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC...GGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATTGCGGCATCCCTCACTaGCCTCCTGGGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: EAEKSRLRHPSLPSWGRHCGIPH*PPGGGI
Trigger: GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCA...ATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCCAGTTTGGGCATCAGTaGGGTGGCAGGTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: AEPQEAEKSRLRHPSLPSQFGHQ*GGRCPL
Trigger: GAGGGGGCACCTGCCACCCCACTGATGCCCAAACTG...GGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp AGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCCCCTCACTGCCCTCCTaGGGGAGGCATCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RLRSRGCGIPHCPPGGGIPSLPS*GRHPPS
Trigger: GCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG...GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGACAGCGAGTCTGAGCTaGTGGACAGCAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PQEAEKSRLRHPSLPSWGTASLS*WTAVEA
Trigger: AGCCTCCACTGCTGTCCATCAGCTCAGACTCGCTGT...CCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp GCACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGCGCCCGCCTTTGTCTaGCTCCTTTGTCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: ALGIRAAMQHCPRRGSPKAPAFV*LLCLPR
Trigger: GCGGGGCAGACAAAGGAGGCAGACAAAGGCGGGCGC...TTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR GCA 90 bp AGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGGGCAGCCATGCAGCACTaGCCTAGGCGGGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: STALGGDPPKSDSLGISGAAMQH*PRRGSP
Trigger: GGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGC...CCCACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCTGCGGCATCCCTCACTaGCCTCCTGGGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGCGIPH*PPGGGI
Trigger: GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCA...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGGGCGTGGACTCGGTCTaGAAGTCCTGTAAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRGVDSV*KSCKGP
Trigger: AGGGCCCTTACAGGACTTCCAGACCGAGTCCACGCC...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp CCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGACGGGGGTCATGCATGTaGACATCCTGCTCATCCGCC +
Preference number: 4 (lower is better)
Translates to: PRRLRSRGCGIPHCPPGGRGSCM*TSCSSA
Trigger: GGCGGATGAGCAGGATGTCCACATGCATGACCCCCG...TCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCGGGGGTCATGCATGTaGACATCCTGCTCATCCGCC +
Preference number: 4 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRRGSCM*TSCSSA
Trigger: GGCGGATGAGCAGGATGTCCACATGCATGACCCCCG...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGGCGATAAGAGCACTTaGAATCAGGGCAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: PSLPSWGRHPPSRPERPRGDKST*NQGSHA
Trigger: TGCATGGCTGCCCTGATTCCAAGTGCTCTTATCGCC...CCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCCCCTCACTGCCCTCCTaGGGGAGGCATCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ETDSVGRRNPRRLRSRGCPSLPS*GRHPPS
Trigger: GCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG...GCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp AGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCCGCGCACGTAGAGGATaGGATGCACAGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RLRSRGCGIPHCPPGGGIRARRG*DAQPPP
Trigger: TGGAGGTGGCTGTGCATCTCATCCTCTACGTGCGCG...GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp AGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCTCTCCAGGAGTGGCTTaGCGCAGTGCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLRSRGCGIPHCPPGGGISPGVA*RSAACP
Trigger: AGGACACGCTGCACTGCGTCAAGCCACTCCTGGAGA...GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGGCAGTGGAGGCTGGGTaGTCTCAAAGACGAATTTCT +
Preference number: 4 (lower is better)
Translates to: PHCPPGGGILQADLSGPGAVEAG*SQRRIS
Trigger: AGAAATTCGTCTTTGAGATCACCCAGCCTCCACTGC...CCCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCCAGGGGCAGCCCACCTaGTGGACAGCAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PCSTALGGDPPKSDSLGIQGQPT*WTAVEA
Trigger: AGCCTCCACTGCTGTCCATCAGGTGGGCTGCCCCTG...GATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376669.9
ENST00000376672.5
CDS-3UTR GCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCGAATCAGGGCAGCCATaGAGCACTGCCCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGESGQP*STALGG
Trigger: CCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACGAATCAGGGCAGCCATaGAGCACTGCCCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDESGQP*STALGG
Trigger: CCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp ACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGAACTCAGAGCGCAGCTaGCGAGGGCGCGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: THSTVFETDSVGRRNPRRNSERS*RGRAGR
Trigger: CCGGCCAGCGCGCCCTCGCCAGCTGCGCTCTGAGTT...CCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp TCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTAGGCCTCTGGGGAGCTaGCCCAGAACTCAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: SGQPCSTALGGDPPKSDSRPLGS*PRTQSA
Trigger: TGCGCTCTGAGTTCTGGGCCAGCTCCCCAGAGGCCT...ACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp CTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCATATTACGGGAGGAGTaGGCCTGCCTCGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LGIRAAMQHCPRRGSPKVILREE*ACLARC
Trigger: GCACCGGGCGAGGCAGGCCCACTCCTCCCGTAATAT...GACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp CCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGACATCGGCCACCACTTaGCCAAAGTTGAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PSLPSWGRHPPSRPERPRTSATT*PKLRSC
Trigger: ACAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGT...CCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGGTGGCAGGACATCTaGACCGGCACGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: PRRLRSRGCGIPHCPPGGGWQDI*TGTLYF
Trigger: GAAGTACAACGTGCCGGTCCAGATGTCCTGCCACCC...TCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGTGTGAAGGTACAGCCTaGGGGGTTGTGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRCEGTA*GVVVQD
Trigger: GTCCTGGACCACAACCCCCCAGGCTGTACCTTCACA...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCCAGTTTGGGCATCAGTaGGGTGGCAGGTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: LGIRAAMQHCPRRGSPKVQFGHQ*GGRCPL
Trigger: GAGGGGGCACCTGCCACCCCACTGATGCCCAAACTG...GACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp TTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTCCCTCACTGCCCTCCTaGGGGAGGCATCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LESGQPCSTALGGDPPKSPSLPS*GRHPPS
Trigger: GCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG...AGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp TCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTCTCCAGGAGTGGCTTaGCGCAGTGCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SGQPCSTALGGDPPKSDSSPGVA*RSAACP
Trigger: AGGACACGCTGCACTGCGTCAAGCCACTCCTGGAGA...ACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGATCCCCCAAAGTCTaGCAGTTTGGGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: PRRLRSRGCGIPHCPPGGGSPKV*QFGHQW
Trigger: CCACTGATGCCCAAACTGTCAGACTTTGGGGGATCC...TCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGTGGCTTGACGCAGTaGAGCGTGTCCTGGATATAC +
Preference number: 4 (lower is better)
Translates to: PQEAEKSRLRHPSLPSWGSGLTQ*SVSWIY
Trigger: GTATATCCAGGACACGCTGCACTGCGTCAAGCCACT...CCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGATCTTCTCCATGTTaGGAGTGGCGGCTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: PRRLRSRGCGIPHCPPGGGSSPC*EWRLLS
Trigger: CGAGAGAAGCCGCCACTCGCAACATGGAGAAGATCC...TCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp AGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGACGGCGCCTAGGCCTCTaGGGAGCTGGCCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: STVFETDSVGRRNPRRLRRRLGL*GAGPEL
Trigger: GAGTTCTGGGCCAGCTCCCCAGAGGCCTAGGCGCCG...TCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp CCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGACGAATTTCTCCACTaGGCGGTGCTCTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: PSLPSWGRHPPSRPERPRDEFLH*AVLFIQ
Trigger: TTGGATAAAGAGCACCGCCCAGTGGAGAAATTCGTC...CCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGCGGGGGTCATGCATGTaGACATCCTGCTCATCCGCC +
Preference number: 4 (lower is better)
Translates to: HLESGQPCSTALGGDPPKRGSCM*TSCSSA
Trigger: GGCGGATGAGCAGGATGTCCACATGCATGACCCCCG...CTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGCGGGGGTCATGCATGTaGACATCCTGCTCATCCGCC +
Preference number: 4 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLRGSCM*TSCSSA
Trigger: GGCGGATGAGCAGGATGTCCACATGCATGACCCCCG...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp AGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGGTCTCCAGGAGTGGCTTaGCGCAGTGCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: STALGGDPPKSDSLGISGSPGVA*RSAACP
Trigger: AGGACACGCTGCACTGCGTCAAGCCACTCCTGGAGA...CCCACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCTCCCGCTACCGGCTCTaGGCTCGGTTCCCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: ETTHSTVFETDSVGRRNPSRYRL*ARFPPE
Trigger: CTCGGGCGGGAACCGAGCGCAGAGCCGGTAGCGGGA...GGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp GAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCTGCGTTTCTGGAAGATaGCCACGGGGTAGACCTCGC +
Preference number: 4 (lower is better)
Translates to: ETDSVGRRNPRRLRSRGCCVSGR*PRGRPR
Trigger: GCGAGGTCTACCCCGTGGGCATCTTCCAGAAACGCA...GCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGTGCGTTTCTGGAAGATaGCCACGGGGTAGACCTCGC +
Preference number: 4 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLCVSGR*PRGRPR
Trigger: GCGAGGTCTACCCCGTGGGCATCTTCCAGAAACGCA...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp AGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCGCGGCTTCTCTCGTGTaGACCAGGACTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: RLRSRGCGIPHCPPGGGIAASLV*TRTVKV
Trigger: TACCTTCACAGTCCTGGTGCACACGAGAGAAGCCGC...GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGGCGGCTTCTCTCGTGTaGACCAGGACTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: DRQCWPAEPQEAEKSRLRAASLV*TRTVKV
Trigger: TACCTTCACAGTCCTGGTGCACACGAGAGAAGCCGC...CCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATGGATCTTCTCCATGTTaGGAGTGGCGGCTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: EAEKSRLRHPSLPSWGRHGSSPC*EWRLLS
Trigger: CGAGAGAAGCCGCCACTCGCAACATGGAGAAGATCC...ATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp AGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCATCAGCCGGGGGTCATaGATGTGGACATCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RLRSRGCGIPHCPPGGGIISRGS*MWTSCS
Trigger: TGAGCAGGATGTCCACATGCATGACCCCCGGCTGAT...GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGGTGCCCCCTCAGCTaGCTTTATGAGCGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDRCPLS*LYERAL
Trigger: AAGAGCGCGCTCATAAAGGCAGCTGAGGGGGCACCT...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGATTCTTCTCCAGGAGTaGCTTGACGCAGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRILLQE*LDAVQR
Trigger: ACGCTGCACTGCGTCAAGCCACTCCTGGAGAAGAAT...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GCACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAATGTGAAGGTACAGCCTaGGGGGTTGTGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ALGIRAAMQHCPRRGSPKCEGTA*GVVVQD
Trigger: GTCCTGGACCACAACCCCCCAGGCTGTACCTTCACA...TTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGTGTGAAGGTACAGCCTaGGGGGTTGTGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLCEGTA*GVVVQD
Trigger: GTCCTGGACCACAACCCCCCAGGCTGTACCTTCACA...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGACAAAGTCTGACAGTTTaGGCATCAGTGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRRLRSRGCGIPHCPPGGQSLTV*ASVGWQ
Trigger: CTGCCACCCCACTGATGCCCAAACTGTCAGACTTTG...TCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCGATAAGAGCACTTaGAATCAGGGCAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: PRRLRSRGCGIPHCPPGGGDKST*NQGSHA
Trigger: TGCATGGCTGCCCTGATTCCAAGTGCTCTTATCGCC...TCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp GAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCAAGGGCCCTCAGAGATaGTATTACGGGAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ETDSVGRRNPRRLRSRGCKGPQR*YYGRSG
Trigger: CCCACTCCTCCCGTAATATCATCTCTGAGGGCCCTT...GCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR TCA 90 bp GCACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTGTCCTGGATATACTaGTTCAGCTCCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALGIRAAMQHCPRRGSPKVSWIY*FSSGWQ
Trigger: CTGCCACCCGGAGCTGAATCAGTATATCCAGGACAC...TTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGTGTCCTGGATATACTaGTTCAGCTCCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLVSWIY*FSSGWQ
Trigger: CTGCCACCCGGAGCTGAATCAGTATATCCAGGACAC...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp TGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTTCTCCAGGAGTGGCTTaGCGCAGTGCAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CSTALGGDPPKSDSLGISSPGVA*RSAACP
Trigger: AGGACACGCTGCACTGCGTCAAGCCACTCCTGGAGA...ACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp GAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCAGCAGCTGCTCCACATaGGACAACAGCGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ETDSVGRRNPRRLRSRGCSSCST*DNSESE
Trigger: CTCAGACTCGCTGTTGTCTCATGTGGAGCAGCTGCT...GCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCAGCAGCTGCTCCACATaGGACAACAGCGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGSSCST*DNSESE
Trigger: CTCAGACTCGCTGTTGTCTCATGTGGAGCAGCTGCT...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGGGCCGAGGTGCCTCCTaGCACTACATTTTACTGCTC +
Preference number: 4 (lower is better)
Translates to: HLESGQPCSTALGGDPPKGRGAS*HYILLL
Trigger: GAGCAGTAAAATGTAGTGGCAGGAGGCACCTCGGCC...CTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR GCA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACGCGGCTTCTCTCGTGTaGACCAGGACTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDAASLV*TRTVKV
Trigger: TACCTTCACAGTCCTGGTGCACACGAGAGAAGCCGC...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTGCATGTGGACATCCTaGTCATCCGCCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: HLESGQPCSTALGGDPPKCMWTS*SSARIQ
Trigger: CTGGATCCTGGCGGATGAGCAGGATGTCCACATGCA...CTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GCACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAATGCATGTGGACATCCTaGTCATCCGCCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: ALGIRAAMQHCPRRGSPKCMWTS*SSARIQ
Trigger: CTGGATCCTGGCGGATGAGCAGGATGTCCACATGCA...TTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGATCAGCCGGGGGTCATaGATGTGGACATCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLISRGS*MWTSCS
Trigger: TGAGCAGGATGTCCACATGCATGACCCCCGGCTGAT...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGCCGGGGGTCATaGATGTGGACATCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGISRGS*MWTSCS
Trigger: TGAGCAGGATGTCCACATGCATGACCCCCGGCTGAT...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGGTGCCCCCTCAGCTaGCTTTATGAGCGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: PCSTALGGDPPKSDSLGIRCPLS*LYERAL
Trigger: AAGAGCGCGCTCATAAAGGCAGCTGAGGGGGCACCT...GATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp AGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCCCCCAGGGGCGTaGACTCGGTCTGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: STVFETDSVGRRNPRRLRSPPGA*TRSGSP
Trigger: AGGACTTCCAGACCGAGTCCACGCCCCTGGGGGACT...TCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp AGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGGGGGTGGCAGGACATCTaGACCGGCACGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: STALGGDPPKSDSLGISGGWQDI*TGTLYF
Trigger: GAAGTACAACGTGCCGGTCCAGATGTCCTGCCACCC...CCCACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGATTCTTCTCCAGGAGTaGCTTGACGCAGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: DRQCWPAEPQEAEKSRLRILLQE*LDAVQR
Trigger: ACGCTGCACTGCGTCAAGCCACTCCTGGAGAAGAAT...CCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGGACGAATTTCTCCACTaGGCGGTGCTCTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: PQEAEKSRLRHPSLPSWGDEFLH*AVLFIQ
Trigger: TTGGATAAAGAGCACCGCCCAGTGGAGAAATTCGTC...CCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GCACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAATCTCCATGTTGCGAGTaGCGGCTTCTCTCGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ALGIRAAMQHCPRRGSPKSPCCE*RLLSCA
Trigger: TGCACACGAGAGAAGCCGCCACTCGCAACATGGAGA...TTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp AGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGGAGCAGCTGCTCCACATaGGACAACAGCGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: STALGGDPPKSDSLGISGSSCST*DNSESE
Trigger: CTCAGACTCGCTGTTGTCTCATGTGGAGCAGCTGCT...CCCACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp AGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGGGGATCCCCCAAAGTCTaGCAGTTTGGGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: STALGGDPPKSDSLGISGGSPKV*QFGHQW
Trigger: CCACTGATGCCCAAACTGTCAGACTTTGGGGGATCC...CCCACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGTTGGGGCCCCTTTATTaGAACAACTCACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRLGPLY*NNSQHS
Trigger: ACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAA...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp TGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTTGCGTTTCTGGAAGATaGCCACGGGGTAGACCTCGC +
Preference number: 4 (lower is better)
Translates to: CSTALGGDPPKSDSLGISCVSGR*PRGRPR
Trigger: GCGAGGTCTACCCCGTGGGCATCTTCCAGAAACGCA...ACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCGGATCTTCTCCATGTTaGGAGTGGCGGCTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: PCSTALGGDPPKSDSLGIGSSPC*EWRLLS
Trigger: CGAGAGAAGCCGCCACTCGCAACATGGAGAAGATCC...GATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp TTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTATCAGCCGGGGGTCATaGATGTGGACATCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LESGQPCSTALGGDPPKSISRGS*MWTSCS
Trigger: TGAGCAGGATGTCCACATGCATGACCCCCGGCTGAT...AGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACCCCTTCAACTTCGGGTaGGCGCGAAGAAAACACAAC +
Preference number: 4 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDPFNFG*ARRKHN
Trigger: GTTGTGTTTTCTTCGCGCCCACCCGAAGTTGAAGGG...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp TGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGGTGGCAGGACATCTaGACCGGCACGTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: CSTALGGDPPKSDSLGISGWQDI*TGTLYF
Trigger: GAAGTACAACGTGCCGGTCCAGATGTCCTGCCACCC...ACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCATTCTTCTCCAGGAGTaGCTTGACGCAGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LGIRAAMQHCPRRGSPKVILLQE*LDAVQR
Trigger: ACGCTGCACTGCGTCAAGCCACTCCTGGAGAAGAAT...GACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATGACAGCAGTGGAGGCTaGGTGATCTCAAAGACGAAT +
Preference number: 4 (lower is better)
Translates to: EAEKSRLRHPSLPSWGRHDSSGG*VISKTN
Trigger: ATTCGTCTTTGAGATCACCCAGCCTCCACTGCTGTC...ATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACGCTGATGGACAGCAGTaGAGGCTGGGTGATCTCAAA +
Preference number: 4 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDADGQQ*RLGDLK
Trigger: TTTGAGATCACCCAGCCTCCACTGCTGTCCATCAGC...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CCA 90 bp TGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTTGTGAAGGTACAGCCTaGGGGGTTGTGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CSTALGGDPPKSDSLGISCEGTA*GVVVQD
Trigger: GTCCTGGACCACAACCCCCCAGGCTGTACCTTCACA...ACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp AGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGGTCTCCATGTTGCGAGTaGCGGCTTCTCTCGTGTGCA +
Preference number: 4 (lower is better)
Translates to: STALGGDPPKSDSLGISGSPCCE*RLLSCA
Trigger: TGCACACGAGAGAAGCCGCCACTCGCAACATGGAGA...CCCACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GCACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAACAAAGTCTGACAGTTTaGGCATCAGTGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALGIRAAMQHCPRRGSPKQSLTV*ASVGWQ
Trigger: CTGCCACCCCACTGATGCCCAAACTGTCAGACTTTG...TTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCCAAAGTCTGACAGTTTaGGCATCAGTGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGQSLTV*ASVGWQ
Trigger: CTGCCACCCCACTGATGCCCAAACTGTCAGACTTTG...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GCACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAACCTGATGGACAGCAGTaGAGGCTGGGTGATCTCAAA +
Preference number: 4 (lower is better)
Translates to: ALGIRAAMQHCPRRGSPKPDGQQ*RLGDLK
Trigger: TTTGAGATCACCCAGCCTCCACTGCTGTCCATCAGG...TTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376669.9
ENST00000376672.5
CDS-3UTR TCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCGCAGTGGAGGCTGGGTaGTCTCAAAGACGAATTTCT +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGAVEAG*SQRRIS
Trigger: AGAAATTCGTCTTTGAGATCACCCAGCCTCCACTGC...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGGCAGTGGAGGCTGGGTaGTCTCAAAGACGAATTTCT +
Preference number: 4 (lower is better)
Translates to: HLESGQPCSTALGGDPPKAVEAG*SQRRIS
Trigger: AGAAATTCGTCTTTGAGATCACCCAGCCTCCACTGC...CTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp CTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTCACAGCACAGTATTTaGGACAGACAGTGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LGIRAAMQHCPRRGSPKVSQHSI*DRQCWP
Trigger: CGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGA...GACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp TGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGCCACTACATTTTACTaGTCCCAAGTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CSTALGGDPPKSDSLGISATTFY*SQVPQG
Trigger: CCCCTGGGGGACTTGGGAGCAGTAAAATGTAGTGGC...ACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR GCA 90 bp CCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAATAAGTCAAGCGAGGTaGAGAAGGGTGAATAACCTG +
Preference number: 4 (lower is better)
Translates to: PRRLRSRGCGIPHCPPGGISQAR*RRVNNL
Trigger: CAGGTTATTCACCCTTCTGCACCTCGCTTGACTTAT...TCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR GCA 90 bp GAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGCACGTTGTACTTCTTaGGTTTCTGGAAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: EPQEAEKSRLRHPSLPSWARCTS*VSGRCP
Trigger: TGGGCATCTTCCAGAAACGCAAGAAGTACAACGTGC...CCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp CCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGCTTGACGCAGTaGAGCGTGTCCTGGATATAC +
Preference number: 4 (lower is better)
Translates to: PCSTALGGDPPKSDSLGISGLTQ*SVSWIY
Trigger: GTATATCCAGGACACGCTGCACTGCGTCAAGCCACT...GATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp TTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTAGTGGCTTGACGCAGTaGAGCGTGTCCTGGATATAC +
Preference number: 4 (lower is better)
Translates to: LESGQPCSTALGGDPPKSSGLTQ*SVSWIY
Trigger: GTATATCCAGGACACGCTGCACTGCGTCAAGCCACT...AGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR GCA 90 bp AGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGGTGCCCCCTCAGCTaGCTTTATGAGCGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: STVFETDSVGRRNPRRLRRCPLS*LYERAL
Trigger: AAGAGCGCGCTCATAAAGGCAGCTGAGGGGGCACCT...TCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp CCAGCCCTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGGCAGCCATGCAGCACTaGCCTAGGCGGGGATCCCCC +
Preference number: 4 (lower is better)
Translates to: PALGAPLLKQLTAQYLRQAAMQH*PRRGSP
Trigger: GGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGC...CTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CCA 90 bp CCAGCCCTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGTGGTGGGGTGGGCGATaGCCGAGGTGCCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PALGAPLLKQLTAQYLRQWWGGR*PRCLLP
Trigger: TGGCAGGAGGCACCTCGGCCATCGCCCACCCCACCA...CTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp CTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCACATCGGCCACCACTTaGCCAAAGTTGAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LGIRAAMQHCPRRGSPKVTSATT*PKLRSC
Trigger: ACAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGT...GACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCGACAGCAGTGGAGGCTaGGTGATCTCAAAGACGAAT +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGDSSGG*VISKTN
Trigger: ATTCGTCTTTGAGATCACCCAGCCTCCACTGCTGTC...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAAATCCTTGATGACCTaGATCTTCTCCATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: PQEAEKSRLRHPSLPSWGKSLMT*IFSMLR
Trigger: TCGCAACATGGAGAAGATCCAGGTCATCAAGGATTT...CCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCCAAAGTCTGACAGTTTaGGCATCAGTGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PCSTALGGDPPKSDSLGIQSLTV*ASVGWQ
Trigger: CTGCCACCCCACTGATGCCCAAACTGTCAGACTTTG...GATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp AGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGCAGCTGCTCCACATaGGACAACAGCGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: STVFETDSVGRRNPRRLRSSCST*DNSESE
Trigger: CTCAGACTCGCTGTTGTCTCATGTGGAGCAGCTGCT...TCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR TCA 90 bp ACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGGGATCCCCCAAAGTCTaGCAGTTTGGGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: THSTVFETDSVGRRNPRRGSPKV*QFGHQW
Trigger: CCACTGATGCCCAAACTGTCAGACTTTGGGGGATCC...CCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp TCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTGCACGTTGTACTTCTTaGGTTTCTGGAAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: SGQPCSTALGGDPPKSDSARCTS*VSGRCP
Trigger: TGGGCATCTTCCAGAAACGCAAGAAGTACAACGTGC...ACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCGACGAATTTCTCCACTaGGCGGTGCTCTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGDEFLH*AVLFIQ
Trigger: TTGGATAAAGAGCACCGCCCAGTGGAGAAATTCGTC...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCGACGAATTTCTCCACTaGGCGGTGCTCTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: LGIRAAMQHCPRRGSPKVDEFLH*AVLFIQ
Trigger: TTGGATAAAGAGCACCGCCCAGTGGAGAAATTCGTC...GACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp TGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTCCTGATGGACAGCAGTaGAGGCTGGGTGATCTCAAA +
Preference number: 4 (lower is better)
Translates to: CSTALGGDPPKSDSLGISPDGQQ*RLGDLK
Trigger: TTTGAGATCACCCAGCCTCCACTGCTGTCCATCAGG...ACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376669.9
ENST00000376672.5
CDS-3UTR TCA 90 bp TTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCGGAACCCCAGGAGGCTaGGAAGTCGAGGTTGCGGCA +
Preference number: 4 (lower is better)
Translates to: LKQLTAQYLRQTVLAGGTGTPGG*EVEVAA
Trigger: TGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCC...GGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp CTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGGCACGGCTGCTGGGCTaGGCCCGCCTTTGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGAPLLKQLTAQYLRQTVARLLG*ARLCLP
Trigger: AGGCAGACAAAGGCGGGCGCAGCCCAGCAGCCGTGC...CACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR GCA 90 bp AGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGGGCACGTTGTACTTCTTaGGTTTCTGGAAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: STALGGDPPKSDSLGISGARCTS*VSGRCP
Trigger: TGGGCATCTTCCAGAAACGCAAGAAGTACAACGTGC...CCCACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCATCTCCACGTTCCATTaGATCGCTACATATCTTCCC +
Preference number: 4 (lower is better)
Translates to: ETDSVGRRNPRRLRSRGCISTFH*IATYLP
Trigger: GGGAAGATATGTAGCGATCCAATGGAACGTGGAGAT...GCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp TGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTACATCGGCCACCACTTaGCCAAAGTTGAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: CSTALGGDPPKSDSLGISTSATT*PKLRSC
Trigger: ACAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGT...ACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp TTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCAGTTTGGGCATCAGTaGGGTGGCAGGTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: LKQLTAQYLRQTVLAGGTQFGHQ*GGRCPL
Trigger: GAGGGGGCACCTGCCACCCCACTGATGCCCAAACTG...GGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR TCA 90 bp ACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGTCACAGCACAGTATTTaGGACAGACAGTGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: THSTVFETDSVGRRNPRRSQHSI*DRQCWP
Trigger: CGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGA...CCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp AAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCACTGAGAAGTCGAGGTTaGGGCATCCCTCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: KQLTAQYLRQTVLAGGTPLRSRG*GIPHCP
Trigger: AGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAG...TGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CCA 90 bp TTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCGAGTGCTGGGCACTaGGCTAAGTGTGTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: LKQLTAQYLRQTVLAGGTPSAGH*AKCVRG
Trigger: TCCACGGACACACTTAGCCCAGTGCCCAGCACTCGG...GGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp ACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGACATCGGCCACCACTTaGCCAAAGTTGAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: THSTVFETDSVGRRNPRRTSATT*PKLRSC
Trigger: ACAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGT...CCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CCA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAAATCCTTGATGACCTaGATCTTCTCCATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDKSLMT*IFSMLR
Trigger: TCGCAACATGGAGAAGATCCAGGTCATCAAGGATTT...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAAATGTCCGACGTCATaGTTTTTAGTGGTATCAGCC +
Preference number: 4 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDKCPTS*FLVVSA
Trigger: GGCTGATACCACTAAAAACCATGACGTCGGACATTT...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGAAATGTCCGACGTCATaGTTTTTAGTGGTATCAGCC +
Preference number: 4 (lower is better)
Translates to: HLESGQPCSTALGGDPPKKCPTS*FLVVSA
Trigger: GGCTGATACCACTAAAAACCATGACGTCGGACATTT...CTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CCA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCAAATGTCCGACGTCATaGTTTTTAGTGGTATCAGCC +
Preference number: 4 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGKCPTS*FLVVSA
Trigger: GGCTGATACCACTAAAAACCATGACGTCGGACATTT...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR TCA 90 bp GAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCATGAGGCAGTTACTGTaGCTGTTCTCTTTATACAGA +
Preference number: 4 (lower is better)
Translates to: ETDSVGRRNPRRLRSRGCMRQLL*LFSLYR
Trigger: TCTGTATAAAGAGAACAGTCACAGTAACTGCCTCAT...GCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR TCA 90 bp CTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGGGAACCCCAGGAGGCTaGGAAGTCGAGGTTGCGGCA +
Preference number: 4 (lower is better)
Translates to: LGAPLLKQLTAQYLRQTVGTPGG*EVEVAA
Trigger: TGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCC...CACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp CCAGCCCTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGTGCGTTTCTGGAAGATaGCCACGGGGTAGACCTCGC +
Preference number: 4 (lower is better)
Translates to: PALGAPLLKQLTAQYLRQCVSGR*PRGRPR
Trigger: GCGAGGTCTACCCCGTGGGCATCTTCCAGAAACGCA...CTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp AAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCATGCATGTGGACATCCTaGTCATCCGCCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: KQLTAQYLRQTVLAGGTPCMWTS*SSARIQ
Trigger: CTGGATCCTGGCGGATGAGCAGGATGTCCACATGCA...TGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CCA 90 bp GAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCGCTGATGGACAGCAGTaGAGGCTGGGTGATCTCAAA +
Preference number: 4 (lower is better)
Translates to: ETTHSTVFETDSVGRRNPADGQQ*RLGDLK
Trigger: TTTGAGATCACCCAGCCTCCACTGCTGTCCATCAGC...GGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp CCAGCCCTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGGCGGCTTCTCTCGTGTaGACCAGGACTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PALGAPLLKQLTAQYLRQAASLV*TRTVKV
Trigger: TACCTTCACAGTCCTGGTGCACACGAGAGAAGCCGC...CTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp CCAGCCCTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGGGATCTTCTCCATGTTaGGAGTGGCGGCTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: PALGAPLLKQLTAQYLRQGSSPC*EWRLLS
Trigger: CGAGAGAAGCCGCCACTCGCAACATGGAGAAGATCC...CTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp ATTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCTGAGAAGTCGAGGTTaGGGCATCCCTCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: IETTHSTVFETDSVGRRNLRSRG*GIPHCP
Trigger: AGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAG...GTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CCA 90 bp ATTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCGGAAGAGGGCTTTTTaGAGCTCCAGCCGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: IETTHSTVFETDSVGRRNRKRAF*SSSRVL
Trigger: CAGCACTCGGCTGGAGCTCCAAAAAGCCCTCTTCCG...GTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CCA 90 bp GAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCGACAGCAGTGGAGGCTaGGTGATCTCAAAGACGAAT +
Preference number: 4 (lower is better)
Translates to: ETTHSTVFETDSVGRRNPDSSGG*VISKTN
Trigger: ATTCGTCTTTGAGATCACCCAGCCTCCACTGCTGTC...GGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CCA 90 bp TTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCGGCGATAAGAGCACTTaGAATCAGGGCAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: LKQLTAQYLRQTVLAGGTGDKST*NQGSHA
Trigger: TGCATGGCTGCCCTGATTCCAAGTGCTCTTATCGCC...GGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR GCA 90 bp CTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTGCATGTGGACATCCTaGTCATCCGCCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LGAPLLKQLTAQYLRQTVCMWTS*SSARIQ
Trigger: CTGGATCCTGGCGGATGAGCAGGATGTCCACATGCA...CACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR TCA 90 bp AAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAAAGAAAACACAACGTTaGTCTCCACGTTCCATTGGA +
Preference number: 4 (lower is better)
Translates to: KQLTAQYLRQTVLAGGTPKKTQR*SPRSIG
Trigger: TCCAATGGAACGTGGAGATCAACGTTGTGTTTTCTT...TGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR TCA 90 bp CTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGGCAGTGGAGGCTGGGTaGTCTCAAAGACGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LGAPLLKQLTAQYLRQTVAVEAG*SQRRIS
Trigger: AGAAATTCGTCTTTGAGATCACCCAGCCTCCACTGC...CACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CCA 90 bp AAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAAAATCCTTGATGACCTaGATCTTCTCCATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: KQLTAQYLRQTVLAGGTPKSLMT*IFSMLR
Trigger: TCGCAACATGGAGAAGATCCAGGTCATCAAGGATTT...TGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR TCA 90 bp CTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGGGCCCCTTTATTaGAACAACTCACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: LGAPLLKQLTAQYLRQTVLGPLY*NNSQHS
Trigger: ACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAA...CACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS CCA 90 bp CTGCCCCGCGCCCTCGCGGCGGCGGCGCCTAGGCCTCTGGGGAGCTaGCCCAGAACTCAGAGCGCAGCTGGCGAGGGCGCGCTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: LPRALAAAAPRPLGS*PRTQSAAGEGALAG
Trigger: CCCGGCCAGCGCGCCCTCGCCAGCTGCGCTCTGAGTTCTGGGCCAGCTCCCCAGAGGCCTAGGCGCCGCCGCCGCGAGGGCGCGGGGCAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376667.7
CDS GCA 90 bp CTCGCCCGGTGCCCGCACGGCTGCTGGGCTGCGCCCGCCTTTGTCTaGCTCCTTTGTCTGCCCCGCGCCCTCGCGGCGGCGGCGCCTAGG +
Preference number: 5 (lower is better)
Translates to: LARCPHGCWAAPAFV*LLCLPRALAAAAPR
Trigger: CCTAGGCGCCGCCGCCGCGAGGGCGCGGGGCAGACAAAGGAGGCAGACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCACCGGGCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376667.7
CDS GCA 90 bp GGAGGAGTGGGCCTGCCTCGCCCGGTGCCCGCACGGCTGCTGGGCTaGGCCCGCCTTTGTCTGCCTCCTTTGTCTGCCCCGCGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: GGVGLPRPVPARLLG*ARLCLPPLSAPRPR
Trigger: GCGAGGGCGCGGGGCAGACAAAGGAGGCAGACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCACCGGGCGAGGCAGGCCCACTCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376667.7
CDS CCA 90 bp TCCTTTGTCTGCCCCGCGCCCTCGCGGCGGCGGCGCCTAGGCCTCTaGGGAGCTGGCCCAGAACTCAGAGCGCAGCTGGCGAGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: SFVCPAPSRRRRLGL*GAGPELRAQLARAR
Trigger: GCGCGCCCTCGCCAGCTGCGCTCTGAGTTCTGGGCCAGCTCCCCAGAGGCCTAGGCGCCGCCGCCGCGAGGGCGCGGGGCAGACAAAGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376667.7
CDS CCA 90 bp TACCGGGAGGAGTGGGCCTGCCTCGCCCGGTGCCCGCACGGCTGCTaGGCTGCGCCCGCCTTTGTCTGCCTCCTTTGTCTGCCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: YREEWACLARCPHGC*AAPAFVCLLCLPRA
Trigger: GGCGCGGGGCAGACAAAGGAGGCAGACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCACCGGGCGAGGCAGGCCCACTCCTCCCGGTA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376655.1
ENST00000376667.7
CDS CCA 90 bp TTACGGGAGGAGTGGGCCTGCCTCGCCCGGTGCCCGCACGGCTGCTaGGCTGCGCCCGCCTTTGTCTGCCTCCTTTGTCTGCCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: LREEWACLARCPHGC*AAPAFVCLLCLPRA
Trigger: GGCGCGGGGCAGACAAAGGAGGCAGACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCACCGGGCGAGGCAGGCCCACTCCTCCCGTAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS GCA 90 bp CCCCCGAAAAGGGCAGGGCCGCGGACGCAGAGGGAAACAGCGGGATaGCCAGGGCCGGGAGCGCAAAGCGGGACATGCGGAAAGCGAAGC +
Preference number: 5 (lower is better)
Translates to: PPKRAGPRTQRETAG*PGPGAQSGTCGKRS
Trigger: GCTTCGCTTTCCGCATGTCCCGCTTTGCGCTCCCGGCCCTGGGCATCCCGCTGTTTCCCTCTGCGTCCGCGGCCCTGCCCTTTTCGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS CCA 90 bp AGGGCCGGGAGCGCAAAGCGGGACATGCGGAAAGCGAAGCGGGGTTaGAATAAGACTCCGCCCCCTGCTACGCCGGATCCCTCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: RAGSAKRDMRKAKRG*NKTPPPATPDPSRR
Trigger: CCGCCGGGAGGGATCCGGCGTAGCAGGGGGCGGAGTCTTATTCCAACCCCGCTTCGCTTTCCGCATGTCCCGCTTTGCGCTCCCGGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS-3UTR CAA 90 bp CCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGCTGAGAAGTCGAGGTaGCGGCATCCCTCACTGCCC +
Preference number: 5 (lower is better)
Translates to: PSLPSWGRHPPSRPERPRAEKSR*RHPSLP
Trigger: GGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGC...CCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS CCA 90 bp ACAGCCTGGAGAGGCAAGAGGTTGGTGGAGGCTCCCCCACCGCCCTaGTGCCAGCCACTGGGCCCAGCCTCTTCCCACTTCCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: TAWRGKRLVEAPPPP*CQPLGPASSHFPCW
Trigger: CCAGCAAGGGAAGTGGGAAGAGGCTGGGCCCAGTGGCTGGCACCAGGGCGGTGGGGGAGCCTCCACCAACCTCTTGCCTCTCCAGGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376664.10
CDS CCA 90 bp CCAGACGCCCCCGCCCCCGGGCCCGCAGGTCCAGCCTCCCTACCTTaGCCAAAGTTGAGGTCTTGTCGTGTGAGCGTGGTCATCCTTCCC +
Preference number: 5 (lower is better)
Translates to: PDAPAPGPAGPASLP*PKLRSCRVSVVILP
Trigger: GGGAAGGATGACCACGCTCACACGACAAGACCTCAACTTTGGCCAAGGTAGGGAGGCTGGACCTGCGGGCCCGGGGGCGGGGGCGTCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445656.5
CDS CCA 90 bp CTTCGCACAGGCTCAGGGCAGCTGGAAGAACCTCCACCCCCACGCTaGCGTCCGTGCTTGGGGGCATCAGCCTCTATCCACTGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LRTGSGQLEEPPPPR*RPCLGASASIHWPP
Trigger: GGGCGGCCAGTGGATAGAGGCTGATGCCCCCAAGCACGGACGCCAGCGTGGGGGTGGAGGTTCTTCCAGCTGCCCTGAGCCTGTGCGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS CCA 90 bp CCGCTCGCTTCCACCGTCTCTTCCCTCCCCACAGTCTGTGGGAACTaGGGAAGGACCTCCCGCTTCGCACAGGCTCAGGGCAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLASTVSSLPTVCGN*GRTSRFAQAQGSWK
Trigger: CTTCCAGCTGCCCTGAGCCTGTGCGAAGCGGGAGGTCCTTCCCCAGTTCCCACAGACTGTGGGGAGGGAAGAGACGGTGGAAGCGAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS-3UTR CAA 90 bp AGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCGGGCTGCGCCCGCCTTaGTCTGCCTCCTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: RLRSRGCGIPHCPPGGGIGLRPP*SASFVC
Trigger: GCAGACAAAGGAGGCAGACAAAGGCGGGCGCAGCCC...GATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS GCA 90 bp AGGGAAACAGCGGGATGCCCAGGGCCGGGAGCGCAAAGCGGGACATaGGGAAAGCGAAGCGGGGTTGGAATAAGACTCCGCCCCCTGCTA +
Preference number: 5 (lower is better)
Translates to: RETAGCPGPGAQSGT*GKRSGVGIRLRPLL
Trigger: TAGCAGGGGGCGGAGTCTTATTCCAACCCCGCTTCGCTTTCCGCATGTCCCGCTTTGCGCTCCCGGCCCTGGGCATCCCGCTGTTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS-3UTR CAA 90 bp CCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGGGCACGTTGTACTTCTaGCGTTTCTGGAAGATGCCC +
Preference number: 5 (lower is better)
Translates to: PHCPPGGGILQADLSGPGGTLYF*RFWKMP
Trigger: GGGCATCTTCCAGAAACGCAAGAAGTACAACGTGCC...CCCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGATCTGGACCGGCACGTaGTACTTCTTGCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: PHCPPGGGILQADLSGPGIWTGT*YFLRFW
Trigger: CCAGAAACGCAAGAAGTACAACGTGCCGGTCCAGAT...CCCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGCTGAGAAGTCGAGGTaGCGGCATCCCTCACTGCCC +
Preference number: 5 (lower is better)
Translates to: EPQEAEKSRLRHPSLPSWAEKSR*RHPSLP
Trigger: GGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGC...CCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGATTGAGACAGACAGTGTaGGCCGGCGGAACCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PRRLRSRGCGIPHCPPGGLRQTV*AGGTPG
Trigger: TCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAA...TCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS CCA 90 bp GGCACCCTGAACATGGCCCGCATGCCTTGGGGCCTGCCCCTGGGTTaGGATGGTCTCCAGAGTGCAGGGAACAGGCTTCTGGGTATTGGA +
Preference number: 5 (lower is better)
Translates to: GTLNMARMPWGLPLG*DGLQSAGNRLLGIG
Trigger: TCCAATACCCAGAAGCCTGTTCCCTGCACTCTGGAGACCATCCCAACCCAGGGGCAGGCCCCAAGGCATGCGGGCCATGTTCAGGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376655.1
CDS-3UTR CAA 90 bp AGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCAGTGGGCTTTGTCTGCCTCCTTaGTCTGCCCCGCGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: STALGGDPPKSDSLGISGLCLPP*SAPRPR
Trigger: GCGAGGGCGCGGGGCAGACAAAGGAGGCAGACAAAG...CCCACTGATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CAA 90 bp CCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGCACATCGGCCACCACTaGGCCAAAGTTGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: PQEAEKSRLRHPSLPSWGHIGHH*AKVEVL
Trigger: CAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGTG...CCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCACATCGGCCACCACTaGGCCAAAGTTGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GRRNPRRLRSRGCGIPHCHIGHH*AKVEVL
Trigger: CAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGTG...GCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATTTCTCCAGGAGTGGCTaGACGCAGTGCAGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: EAEKSRLRHPSLPSWGRHFSRSG*TQCSVS
Trigger: GGACACGCTGCACTGCGTCAAGCCACTCCTGGAGAA...ATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCGCTGAGAAGTCGAGGTaGCGGCATCCCTCACTGCCC +
Preference number: 5 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGAEKSR*RHPSLP
Trigger: GGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGC...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS CCA 90 bp CCTGAACATGGCCCGCATGCCTTGGGGCCTGCCCCTGGGTTGGGATaGTCTCCAGAGTGCAGGGAACAGGCTTCTGGGTATTGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: PEHGPHALGPAPGLG*SPECREQASGYWSH
Trigger: ATGGCTCCAATACCCAGAAGCCTGTTCCCTGCACTCTGGAGACCATCCCAACCCAGGGGCAGGCCCCAAGGCATGCGGGCCATGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376655.1
CDS CCA 90 bp AAGGAGGAGAAACGGCCCACTCACAGCCCTGCTCAGCTGCTAGGCTaGGGGTCCCCAAGAGGCCAGATAGCGAGTTTGAGAAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: KEEKRPTHSPAQLLG*GSPRGQIASLRSRH
Trigger: GTGCCGGCTTCTCAAACTCGCTATCTGGCCTCTTGGGGACCCCCAGCCTAGCAGCTGAGCAGGGCTGTGAGTGGGCCGTTTCTCCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376655.1
CDS-3UTR CAA 90 bp GGCCGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCATCTGGACCGGCACGTaGTACTTCTTGCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GRRNPRRLRSRGCGIPHCIWTGT*YFLRFW
Trigger: CCAGAAACGCAAGAAGTACAACGTGCCGGTCCAGAT...GCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACTTCTCCAGGAGTGGCTaGACGCAGTGCAGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDFSRSG*TQCSVS
Trigger: GGACACGCTGCACTGCGTCAAGCCACTCCTGGAGAA...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGTTCTCCAGGAGTGGCTaGACGCAGTGCAGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLFSRSG*TQCSVS
Trigger: GGACACGCTGCACTGCGTCAAGCCACTCCTGGAGAA...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GCACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAATTCTCCAGGAGTGGCTaGACGCAGTGCAGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: ALGIRAAMQHCPRRGSPKFSRSG*TQCSVS
Trigger: GGACACGCTGCACTGCGTCAAGCCACTCCTGGAGAA...TTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGTTGAGACAGACAGTGTaGGCCGGCGGAACCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLLRQTV*AGGTPG
Trigger: TCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAA...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS CCA 90 bp AGGGTGAATAACCTGCCCGAGTCTCCCAGCTGGTGGGGTGGGCGATaGCCGAGGTGCCTCCTGCCACTACATTTTACTGCTCCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: RVNNLPESPSWWGGR*PRCLLPLHFTAPKS
Trigger: GGACTTGGGAGCAGTAAAATGTAGTGGCAGGAGGCACCTCGGCCATCGCCCACCCCACCAGCTGGGAGACTCGGGCAGGTTATTCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS CCA 90 bp CAAGCGAGGTGCAGAAGGGTGAATAACCTGCCCGAGTCTCCCAGCTaGTGGGGTGGGCGATGGCCGAGGTGCCTCCTGCCACTACATTTT +
Preference number: 5 (lower is better)
Translates to: QARCRRVNNLPESPS*WGGRWPRCLLPLHF
Trigger: AAAATGTAGTGGCAGGAGGCACCTCGGCCATCGCCCACCCCACCAGCTGGGAGACTCGGGCAGGTTATTCACCCTTCTGCACCTCGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS CCA 90 bp GGGCGAGGGGCAGGGGCAGCCCACCTGATGGACAGCAGTGGAGGCTaGGTGATCTCAAAGACGAATTTCTCCACTGGGCGGTGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: GRGAGAAHLMDSSGG*VISKTNFSTGRCSL
Trigger: TAAAGAGCACCGCCCAGTGGAGAAATTCGTCTTTGAGATCACCCAGCCTCCACTGCTGTCCATCAGGTGGGCTGCCCCTGCCCCTCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376669.9
ENST00000376672.5
CDS-3UTR CAA 90 bp CCCTCACTGCCCTCCTGGGGGAGGCATCCTCCAAGCAGACCTGAGCGGCCCCGGGAAGAAAACACAACGTaGATCTCCACGTTCCATTGG +
Preference number: 5 (lower is better)
Translates to: PSLPSWGRHPPSRPERPREENTT*ISTFHW
Trigger: CCAATGGAACGTGGAGATCAACGTTGTGTTTTCTTC...CCGGGGCCGCTCAGGTCTGCTTGGAGGATGCCTCCCCCAGGAGGGCAGTGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CAA 90 bp GCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCACCACTTGGCCAAAGTaGAGGTCTTGTCGTGTGAGC +
Preference number: 5 (lower is better)
Translates to: AEPQEAEKSRLRHPSLPSTTWPK*RSCRVS
Trigger: GCTCACACGACAAGACCTCAACTTTGGCCAAGTGGT...GGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CGGCGGAACCCCAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTACCACTTGGCCAAAGTaGAGGTCTTGTCGTGTGAGC +
Preference number: 5 (lower is better)
Translates to: RRNPRRLRSRGCGIPHCPTTWPK*RSCRVS
Trigger: GCTCACACGACAAGACCTCAACTTTGGCCAAGTGGT...AGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTGGGGTTCCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGATCTGGACCGGCACGTaGTACTTCTTGCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRIWTGT*YFLRFW
Trigger: CCAGAAACGCAAGAAGTACAACGTGCCGGTCCAGAT...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCTTGAGACAGACAGTGTaGGCCGGCGGAACCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PCSTALGGDPPKSDSLGILRQTV*AGGTPG
Trigger: TCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAA...GATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS TCA 90 bp CACACGCTGATCTTCAGGATGAAGGCCCGGAGCAGCTGCTCCACATaGGACAACAGCGAGTCTGAGCTGATGCCAGCTAGTGGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: HTLIFRMKARSSCST*DNSESELMPASGRG
Trigger: CCCTCGCCCACTAGCTGGCATCAGCTCAGACTCGCTGTTGTCTCATGTGGAGCAGCTGCTCCGGGCCTTCATCCTGAAGATCAGCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376669.9
ENST00000376672.5
CDS CCA 90 bp ACCATGGAAATGCCAAGGGAAGAGAGGGTGGGGAGTGGACACACCTaGGGGGTTGTGGTCCAGGACGGCATCGCACACGCTGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: TMEMPREERVGSGHT*GVVVQDGIAHADLQ
Trigger: CTGAAGATCAGCGTGTGCGATGCCGTCCTGGACCACAACCCCCCAGGTGTGTCCACTCCCCACCCTCTCTTCCCTTGGCATTTCCATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376664.10
CDS-3UTR CAA 90 bp CACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGCACATCGGCCACCACTaGGCCAAAGTTGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: HLESGQPCSTALGGDPPKHIGHH*AKVEVL
Trigger: CAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGTG...CTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCCACATCGGCCACCACTaGGCCAAAGTTGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGHIGHH*AKVEVL
Trigger: CAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGTG...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CAGGAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGATCCAGGGGAAATCCTaGATGACCTGGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QEAEKSRLRHPSLPSWGRIQGKS*MTWIFS
Trigger: GGAGAAGATCCAGGTCATCAAGGATTTCCCCTGGAT...CCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CACTTGGAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGCCAAAGTCTGACAGTTaGGGCATCAGTGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: HLESGQPCSTALGGDPPKPKSDS*GISGVA
Trigger: TGCCACCCCACTGATGCCCAAACTGTCAGACTTTGG...CTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTCCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp TCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTCCAAAGTCTGACAGTTaGGGCATCAGTGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SGQPCSTALGGDPPKSDSPKSDS*GISGVA
Trigger: TGCCACCCCACTGATGCCCAAACTGTCAGACTTTGG...ACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS TCA 90 bp CACACGCTGATCTTCAGGATGAAGGCCCGGAGCAGCTGCTCCACATaGGACAACAGCGAGTCTGAGCTGATGGACAGCAGTGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: HTLIFRMKARSSCST*DNSESELMDSSGGW
Trigger: CCAGCCTCCACTGCTGTCCATCAGCTCAGACTCGCTGTTGTCTCATGTGGAGCAGCTGCTCCGGGCCTTCATCCTGAAGATCAGCGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000235310.7
ENST00000376664.10
ENST00000376667.7
ENST00000376692.9
ENST00000445656.5
ENST00000456915.1
CDS-3UTR CAA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACGCCAAAGTTGAGGTCTaGTCGTGTGAGCGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDAKVEV*SCERGH
Trigger: ATGACCACGCTCACACGACAAGACCTCAACTTTGGC...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp TCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTGGCACGTTGTACTTCTaGCGTTTCTGGAAGATGCCC +
Preference number: 5 (lower is better)
Translates to: SGQPCSTALGGDPPKSDSGTLYF*RFWKMP
Trigger: GGGCATCTTCCAGAAACGCAAGAAGTACAACGTGCC...ACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCGGCACGTTGTACTTCTaGCGTTTCTGGAAGATGCCC +
Preference number: 5 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGGTLYF*RFWKMP
Trigger: GGGCATCTTCCAGAAACGCAAGAAGTACAACGTGCC...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGATCTGGACCGGCACGTaGTACTTCTTGCGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLIWTGT*YFLRFW
Trigger: CCAGAAACGCAAGAAGTACAACGTGCCGGTCCAGAT...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCCCAAAGTCTGACAGTTaGGGCATCAGTGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PCSTALGGDPPKSDSLGIPKSDS*GISGVA
Trigger: TGCCACCCCACTGATGCCCAAACTGTCAGACTTTGG...GATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GAGGCTGAGAAGTCGAGGTTGCGGCATCCCTCACTGCCCTCCTGGGGGAGGCATCTTGGGGCCCCTTTATaGAAACAACTCACAGCACAG +
Preference number: 5 (lower is better)
Translates to: EAEKSRLRHPSLPSWGRHLGAPL*KQLTAQ
Trigger: CTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAG...ATGCCTCCCCCAGGAGGGCAGTGAGGGATGCCGCAACCTCGACTTCTCAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS TCA 90 bp TTCTCCAGGAGTGGCTTGACGCAGTGCAGCGTGTCCTGGATATACTaGTTCAGCTCCGGGTGGCAGGACATCTGGACCGGCACGTTGTAC +
Preference number: 5 (lower is better)
Translates to: FSRSGLTQCSVSWIY*FSSGWQDIWTGTLY
Trigger: GTACAACGTGCCGGTCCAGATGTCCTGCCACCCGGAGCTGAATCAGTATATCCAGGACACGCTGCACTGCGTCAAGCCACTCCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376664.10
ENST00000376667.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
ENST00000445656.5
ENST00000456915.1
CDS-3UTR CAA 90 bp CCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCACCACTTGGCCAAAGTaGAGGTCTTGTCGTGTGAGC +
Preference number: 5 (lower is better)
Translates to: PCSTALGGDPPKSDSLGITTWPK*RSCRVS
Trigger: GCTCACACGACAAGACCTCAACTTTGGCCAAGTGGT...GATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp CCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCATCGGCACGTTGTACTTCTaGCGTTTCTGGAAGATGCCC +
Preference number: 5 (lower is better)
Translates to: PCSTALGGDPPKSDSLGIGTLYF*RFWKMP
Trigger: GGGCATCTTCCAGAAACGCAAGAAGTACAACGTGCC...GATGCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GAATCAGGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACATCCAGGGGAAATCCTaGATGACCTGGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ESGQPCSTALGGDPPKSDIQGKS*MTWIFS
Trigger: GGAGAAGATCCAGGTCATCAAGGATTTCCCCTGGAT...GTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCCTGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS-3UTR CAA 90 bp GGGCAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGCTTGGGGCCCCTTTATaGAAACAACTCACAGCACAG +
Preference number: 5 (lower is better)
Translates to: GQPCSTALGGDPPKSDSLLGAPL*KQLTAQ
Trigger: CTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAG...CAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CAA 90 bp CAGCCATGCAGCACTGCCCTAGGCGGGGATCCCCCAAAGTCTGACAGTTTGGGCGATCTCCACGTTCCATaGGATCGCTACATATCTTCC +
Preference number: 5 (lower is better)
Translates to: QPCSTALGGDPPKSDSLGDLHVP*DRYISS
Trigger: GGAAGATATGTAGCGATCCAATGGAACGTGGAGATC...GCCCAAACTGTCAGACTTTGGGGGATCCCCGCCTAGGGCAGTGCTGCATGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CAA 90 bp AGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGACCAAAGTCTGACAGTTaGGGCATCAGTGGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: STVFETDSVGRRNPRRLRPKSDS*GISGVA
Trigger: TGCCACCCCACTGATGCCCAAACTGTCAGACTTTGG...TCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS TCA 90 bp GCCACCTCCCTTCAACTTCGGGTGGGCGCGAAGAAAACACAACGTTaGTCTCCACGTTCCATTGGATCGCTACATATCTTCCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: ATSLQLRVGAKKTQR*SPRSIGSLHIFPRG
Trigger: CCCTCGGGGGAAGATATGTAGCGATCCAATGGAACGTGGAGATCAACGTTGTGTTTTCTTCGCGCCCACCCGAAGTTGAAGGGAGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CAA 90 bp AGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAGGAGGCTGAGACTCACAGCACAGTATTaGAGACAGACAGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: STVFETDSVGRRNPRRLRLTAQY*RQTVLA
Trigger: GGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAG...TCTCAGCCTCCTGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS-3UTR CAA 90 bp GAAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCCTCACAGCACAGTATTaGAGACAGACAGTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: ETTHSTVFETDSVGRRNPLTAQY*RQTVLA
Trigger: GGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAG...GGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS GCA 90 bp GCAGTTACTGTGACTGTTCTCTTTATACAGATAAGTCAAGCGAGGTaGAGAAGGGTGAATAACCTGCCCGAGTCTCCCAGCTGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: AVTVTVLFIQISQAR*RRVNNLPESPSWWG
Trigger: ACCCCACCAGCTGGGAGACTCGGGCAGGTTATTCACCCTTCTGCACCTCGCTTGACTTATCTGTATAAAGAGAACAGTCACAGTAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS-3UTR CAA 90 bp AAACAACTCACAGCACAGTATTTGAGACAGACAGTGTTGGCCGGCGGAACCCCAATCCAGGGGAAATCCTaGATGACCTGGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KQLTAQYLRQTVLAGGTPIQGKS*MTWIFS
Trigger: GGAGAAGATCCAGGTCATCAAGGATTTCCCCTGGAT...TGGGGTTCCGCCGGCCAACACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS CCA 90 bp TCAGGGTTAGGAAGAGATGAGTCTCAGAACAGCCAAACATGGACCTaGGAACACAGACCAACCCGAGATAACCATGGAAATGCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: SGLGRDESQNSQTWT*EHRPTRDNHGNAKG
Trigger: TCCCTTGGCATTTCCATGGTTATCTCGGGTTGGTCTGTGTTCCCAGGTCCATGTTTGGCTGTTCTGAGACTCATCTCTTCCTAACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376664.10
CDS-3UTR CAA 90 bp CCAGCCCTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGATCCAGGGGAAATCCTaGATGACCTGGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PALGAPLLKQLTAQYLRQIQGKS*MTWIFS
Trigger: GGAGAAGATCCAGGTCATCAAGGATTTCCCCTGGAT...CTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS GCA 90 bp AGTGGAGGCTGGGTGATCTCAAAGACGAATTTCTCCACTGGGCGGTaGTCTTTATCCAAAATCACCACCACCACTTTCTCCACATCATTC +
Preference number: 5 (lower is better)
Translates to: SGGWVISKTNFSTGR*SLSKITTTTFSTSF
Trigger: GAATGATGTGGAGAAAGTGGTGGTGGTGATTTTGGATAAAGAGCACCGCCCAGTGGAGAAATTCGTCTTTGAGATCACCCAGCCTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000235310.7
ENST00000376664.10
ENST00000376667.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
ENST00000445656.5
ENST00000456915.1
CDS-3UTR CAA 90 bp CTTGGGGCCCCTTTATTGAAACAACTCACAGCACAGTATTTGAGACAGACAGTGACCACTTGGCCAAAGTaGAGGTCTTGTCGTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LGAPLLKQLTAQYLRQTVTTWPK*RSCRVS
Trigger: GCTCACACGACAAGACCTCAACTTTGGCCAAGTGGT...CACTGTCTGTCTCAAATACTGTGCTGTGAGTTGTTTCAATAAAGGGGCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000235310.7
ENST00000376692.9
CDS CCA 72 bp GCCCTCGCGGCGGCGGCGCCTAGGCCTCTGGGGAGCTaGCCCAGAACTCAGAGCGCAGCTGGCGAGGGCGCG +
Preference number: 6 (lower is better)
Translates to: ALAAAAPRPLGS*PRTQSAAGEGA
Trigger: CGCGCCCTCGCCAGCTGCGCTCTGAGTTCTGGGCCAGCTCCCCAGAGGCCTAGGCGCCGCCGCCGCGAGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376667.7
CDS CCA 72 bp TGCCCCGCGCCCTCGCGGCGGCGGCGCCTAGGCCTCTaGGGAGCTGGCCCAGAACTCAGAGCGCAGCTGGCG +
Preference number: 6 (lower is better)
Translates to: CPAPSRRRRLGL*GAGPELRAQLA
Trigger: CGCCAGCTGCGCTCTGAGTTCTGGGCCAGCTCCCCAGAGGCCTAGGCGCCGCCGCCGCGAGGGCGCGGGGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376667.7
CDS GCA 72 bp TGCCCGCACGGCTGCTGGGCTGCGCCCGCCTTTGTCTaGCTCCTTTGTCTGCCCCGCGCCCTCGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: CPHGCWAAPAFV*LLCLPRALAAA
Trigger: CGCCGCCGCGAGGGCGCGGGGCAGACAAAGGAGGCAGACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376667.7
CDS GCA 72 bp TCCCGCTACCGGGAGGAGTGGGCCTGCCTCGCCCGGTaGCCGCACGGCTGCTGGGCTGCGCCCGCCTTTGTC +
Preference number: 6 (lower is better)
Translates to: SRYREEWACLAR*PHGCWAAPAFV
Trigger: GACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCACCGGGCGAGGCAGGCCCACTCCTCCCGGTAGCGGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376655.1
ENST00000376667.7
ENST00000376672.5
CDS CAA 72 bp CCCGGTGCCCGCACGGCTGCTGGGCTGCGCCCGCCTTaGTCTGCCTCCTTTGTCTGCCCCGCGCCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: PGARTAAGLRPP*SASFVCPAPSR
Trigger: CCGCGAGGGCGCGGGGCAGACAAAGGAGGCAGACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCACCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376667.7
CDS GCA 72 bp CGTGGTCATCCTTCCCGCTACCGGGAGGAGTGGGCCTaGCTCGCCCGGTGCCCGCACGGCTGCTGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: RGHPSRYREEWA*LARCPHGCWAA
Trigger: CGCAGCCCAGCAGCCGTGCGGGCACCGGGCGAGGCAGGCCCACTCCTCCCGGTAGCGGGAAGGATGACCACG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376655.1
ENST00000376667.7
ENST00000376672.5
CDS GCA 72 bp AGGGCAGGGCCGCGGACGCAGAGGGAAACAGCGGGATaGCCAGGGCCGGGAGCGCAAAGCGGGACATGCGGA +
Preference number: 6 (lower is better)
Translates to: RAGPRTQRETAG*PGPGAQSGTCG
Trigger: TCCGCATGTCCCGCTTTGCGCTCCCGGCCCTGGGCATCCCGCTGTTTCCCTCTGCGTCCGCGGCCCTGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS GCA 72 bp GGGCCCTCAGAGATGATATTACGGGAGGAGTGGGCCTaGCTCGCCCGGTGCCCGCACGGCTGCTGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: GPSEMILREEWA*LARCPHGCWAA
Trigger: CGCAGCCCAGCAGCCGTGCGGGCACCGGGCGAGGCAGGCCCACTCCTCCCGTAATATCATCTCTGAGGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS GCA 72 bp ATGATATTACGGGAGGAGTGGGCCTGCCTCGCCCGGTaGCCGCACGGCTGCTGGGCTGCGCCCGCCTTTGTC +
Preference number: 6 (lower is better)
Translates to: MILREEWACLAR*PHGCWAAPAFV
Trigger: GACAAAGGCGGGCGCAGCCCAGCAGCCGTGCGGGCACCGGGCGAGGCAGGCCCACTCCTCCCGTAATATCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS CCA 72 bp TGGAAGAACCTCCACCCCCACGCTGGCGTCCGTGCTTaGGGGCATCAGCCTCTATCCACTGGCCGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: WKNLHPHAGVRA*GHQPLSTGRPR
Trigger: GCGCGGGCGGCCAGTGGATAGAGGCTGATGCCCCCAAGCACGGACGCCAGCGTGGGGGTGGAGGTTCTTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS CAA 72 bp CTGGAAGAACCTCCACCCCCACGCTGGCGTCCGTGCTaGGGGGCATCAGCCTCTATCCACTGGCCGCCCGCG +
Preference number: 6 (lower is better)
Translates to: LEEPPPPRWRPC*GASASIHWPPA
Trigger: CGCGGGCGGCCAGTGGATAGAGGCTGATGCCCCCAAGCACGGACGCCAGCGTGGGGGTGGAGGTTCTTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS GCA 72 bp CAGCTGGAAGAACCTCCACCCCCACGCTGGCGTCCGTaGTTGGGGGCATCAGCCTCTATCCACTGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: QLEEPPPPRWRP*LGASASIHWPP
Trigger: GGGCGGCCAGTGGATAGAGGCTGATGCCCCCAAGCACGGACGCCAGCGTGGGGGTGGAGGTTCTTCCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS CCA 72 bp GGAAGGACCTCCCGCTTCGCACAGGCTCAGGGCAGCTaGAAGAACCTCCACCCCCACGCTGGCGTCCGTGCT +
Preference number: 6 (lower is better)
Translates to: GRTSRFAQAQGS*KNLHPHAGVRA
Trigger: AGCACGGACGCCAGCGTGGGGGTGGAGGTTCTTCCAGCTGCCCTGAGCCTGTGCGAAGCGGGAGGTCCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS GCA 72 bp GCGGGATGCCCAGGGCCGGGAGCGCAAAGCGGGACATaGGGAAAGCGAAGCGGGGTTGGAATAAGACTCCGC +
Preference number: 6 (lower is better)
Translates to: AGCPGPGAQSGT*GKRSGVGIRLR
Trigger: GCGGAGTCTTATTCCAACCCCGCTTCGCTTTCCGCATGTCCCGCTTTGCGCTCCCGGCCCTGGGCATCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS CCA 72 bp TGCAGAAGGGTGAATAACCTGCCCGAGTCTCCCAGCTaGTGGGGTGGGCGATGGCCGAGGTGCCTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: CRRVNNLPESPS*WGGRWPRCLLP
Trigger: TGGCAGGAGGCACCTCGGCCATCGCCCACCCCACCAGCTGGGAGACTCGGGCAGGTTATTCACCCTTCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS CCA 72 bp TCCACCGTCTCTTCCCTCCCCACAGTCTGTGGGAACTaGGGAAGGACCTCCCGCTTCGCACAGGCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: STVSSLPTVCGN*GRTSRFAQAQG
Trigger: GCCCTGAGCCTGTGCGAAGCGGGAGGTCCTTCCCCAGTTCCCACAGACTGTGGGGAGGGAAGAGACGGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS CCA 72 bp AACATGGCCCGCATGCCTTGGGGCCTGCCCCTGGGTTaGGATGGTCTCCAGAGTGCAGGGAACAGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: NMARMPWGLPLG*DGLQSAGNRLL
Trigger: CAGAAGCCTGTTCCCTGCACTCTGGAGACCATCCCAACCCAGGGGCAGGCCCCAAGGCATGCGGGCCATGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376655.1
CDS CCA 72 bp AGCGCAAAGCGGGACATGCGGAAAGCGAAGCGGGGTTaGAATAAGACTCCGCCCCCTGCTACGCCGGATCCC +
Preference number: 6 (lower is better)
Translates to: SAKRDMRKAKRG*NKTPPPATPDP
Trigger: GGGATCCGGCGTAGCAGGGGGCGGAGTCTTATTCCAACCCCGCTTCGCTTTCCGCATGTCCCGCTTTGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS CAA 72 bp GAACATGGCCCGCATGCCTTGGGGCCTGCCCCTGGGTaGGGATGGTCTCCAGAGTGCAGGGAACAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: EHGPHALGPAPG*GWSPECREQAS
Trigger: AGAAGCCTGTTCCCTGCACTCTGGAGACCATCCCAACCCAGGGGCAGGCCCCAAGGCATGCGGGCCATGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376655.1
CDS CAA 90 bp AGGCACCCTGAACATGGCCCGCATGCCTTGGGGCCTGCCCCTGGGTaGGGATGGTCTCCAGAGTGCAGGGAACAGGCTTCTGGGTATTGG +
Preference number: 6 (lower is better)
Translates to: RHPEHGPHALGPAPG*GWSPECREQASGYW
Trigger: CCAATACCCAGAAGCCTGTTCCCTGCACTCTGGAGACCATCCCAACCCAGGGGCAGGCCCCAAGGCATGCGGGCCATGTTCAGGGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376655.1
CDS GCA 72 bp GAGTCTCCCAGCTGGTGGGGTGGGCGATGGCCGAGGTaGCTCCTGCCACTACATTTTACTGCTCCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: ESPSWWGGRWPR*LLPLHFTAPKS
Trigger: GGACTTGGGAGCAGTAAAATGTAGTGGCAGGAGGCACCTCGGCCATCGCCCACCCCACCAGCTGGGAGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS GCA 72 bp GGCACCCTCCAGCATGAGTGGTGTAGGCTGAGAGAATaGCCGGGCCCCATAGGGAAGGTCCCAGGAAGTCTG +
Preference number: 6 (lower is better)
Translates to: GTLQHEWCRLRE*PGPIGKVPGSL
Trigger: CAGACTTCCTGGGACCTTCCCTATGGGGCCCGGGCATTCTCTCAGCCTACACCACTCATGCTGGAGGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376655.1
CDS CCA 72 bp AACCTGCCCGAGTCTCCCAGCTGGTGGGGTGGGCGATaGCCGAGGTGCCTCCTGCCACTACATTTTACTGCT +
Preference number: 6 (lower is better)
Translates to: NLPESPSWWGGR*PRCLLPLHFTA
Trigger: AGCAGTAAAATGTAGTGGCAGGAGGCACCTCGGCCATCGCCCACCCCACCAGCTGGGAGACTCGGGCAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS TCA 72 bp AGTGGCTTGACGCAGTGCAGCGTGTCCTGGATATACTaGTTCAGCTCCGGGTGGCAGGACATCTGGACCGGC +
Preference number: 6 (lower is better)
Translates to: SGLTQCSVSWIY*FSSGWQDIWTG
Trigger: GCCGGTCCAGATGTCCTGCCACCCGGAGCTGAATCAGTATATCCAGGACACGCTGCACTGCGTCAAGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376664.10
ENST00000376667.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
ENST00000445656.5
ENST00000456915.1
CDS GCA 72 bp GGTGGCAGGACATCTGGACCGGCACGTTGTACTTCTTaGGTTTCTGGAAGATGCCCACGGGGTAGACCTCGC +
Preference number: 6 (lower is better)
Translates to: GGRTSGPARCTS*VSGRCPRGRPR
Trigger: GCGAGGTCTACCCCGTGGGCATCTTCCAGAAACGCAAGAAGTACAACGTGCCGGTCCAGATGTCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376664.10
ENST00000376667.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
ENST00000445656.5
ENST00000456915.1
CDS GCA 72 bp TTTGGGCATCAGTGGGGTGGCAGGTGCCCCCTCAGCTaGCTTTATGAGCGCGCTCTTCCACGTAAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: FGHQWGGRCPLS*LYERALPRKAA
Trigger: TGCAGCTTTACGTGGAAGAGCGCGCTCATAAAGGCAGCTGAGGGGGCACCTGCCACCCCACTGATGCCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000235310.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS CCA 72 bp CTGAGACCCGCCGCGCCACCTCCCTTCAACTTCGGGTaGGCGCGAAGAAAACACAACGTTGATCTCCACGTT +
Preference number: 6 (lower is better)
Translates to: LRPAAPPPFNFG*ARRKHNVDLHV
Trigger: AACGTGGAGATCAACGTTGTGTTTTCTTCGCGCCCACCCGAAGTTGAAGGGAGGTGGCGCGGCGGGTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS CAA 72 bp GAGCACATCGGCCACCACTTGGCCAAAGTTGAGGTCTaGTCGTGTGAGCGTGGTCATCCTTCCCGCTACCGG +
Preference number: 6 (lower is better)
Translates to: EHIGHHLAKVEV*SCERGHPSRYR
Trigger: CCGGTAGCGGGAAGGATGACCACGCTCACACGACAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000235310.7
ENST00000376655.1
ENST00000376664.10
ENST00000376667.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS CAA 72 bp AGGTCCAGCCTCCCTACCTTGGCCAAAGTTGAGGTCTaGTCGTGTGAGCGTGGTCATCCTTCCCGCTACCGG +
Preference number: 6 (lower is better)
Translates to: RSSLPTLAKVEV*SCERGHPSRYR
Trigger: CCGGTAGCGGGAAGGATGACCACGCTCACACGACAAGACCTCAACTTTGGCCAAGGTAGGGAGGCTGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445656.5
CDS CCA 72 bp GAGGGCTTTTTGGAGCTCCAGCCGAGTGCTGGGCACTaGGCTAAGTGTGTCCGTGGATTATCTCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: EGFLELQPSAGH*AKCVRGLSQSW
Trigger: CCAGGACTGAGATAATCCACGGACACACTTAGCCCAGTGCCCAGCACTCGGCTGGAGCTCCAAAAAGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS CAA 72 bp GAGCACATCGGCCACCACTTGGCCAAAGTTGAGGTCTaGTCGTGTGAGCGTGGTCATCCTTCCCGCTACCTG +
Preference number: 6 (lower is better)
Translates to: EHIGHHLAKVEV*SCERGHPSRYL
Trigger: CAGGTAGCGGGAAGGATGACCACGCTCACACGACAAGACCTCAACTTTGGCCAAGTGGTGGCCGATGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456915.1
CDS TCA 72 bp GAGCCCAGTGCACCCTCACCTTCTCCAGGAGTGGCTTaGCGCAGTGCAGCGTGTCCTGGATATACTGATTCA +
Preference number: 6 (lower is better)
Translates to: EPSAPSPSPGVA*RSAACPGYTDS
Trigger: TGAATCAGTATATCCAGGACACGCTGCACTGCGTCAAGCCACTCCTGGAGAAGGTGAGGGTGCACTGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376655.1
CDS CAA 90 bp CGCCACCTCCCTTCAACTTCGGGTGGGCGCGAAGAAAACACAACGTaGATCTCCACGTTCCATTGGATCGCTACATATCTTCCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: RHLPSTSGGREENTT*ISTFHWIATYLPPR
Trigger: CCTCGGGGGAAGATATGTAGCGATCCAATGGAACGTGGAGATCAACGTTGTGTTTTCTTCGCGCCCACCCGAAGTTGAAGGGAGGTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS CAA 90 bp GCCAGGATCCAGGGGAAATCCTTGATGACCTGGATCTTCTCCATGTaGCGAGTGGCGGCTTCTCTCGTGTGCACCAGGACTGTGAAGGTA +
Preference number: 6 (lower is better)
Translates to: ARIQGKSLMTWIFSM*RVAASLVCTRTVKV
Trigger: TACCTTCACAGTCCTGGTGCACACGAGAGAAGCCGCCACTCGCAACATGGAGAAGATCCAGGTCATCAAGGATTTCCCCTGGATCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000235310.7
ENST00000376667.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS TCA 72 bp ATCTTCAGGATGAAGGCCCGGAGCAGCTGCTCCACATaGGACAACAGCGAGTCTGAGCTGATGGACAGCAGT +
Preference number: 6 (lower is better)
Translates to: IFRMKARSSCST*DNSESELMDSS
Trigger: ACTGCTGTCCATCAGCTCAGACTCGCTGTTGTCTCATGTGGAGCAGCTGCTCCGGGCCTTCATCCTGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000235310.7
ENST00000376664.10
ENST00000376667.7
ENST00000376692.9
ENST00000445656.5
ENST00000456915.1
CDS TCA 72 bp ATCTTCAGGATGAAGGCCCGGAGCAGCTGCTCCACATaGGACAACAGCGAGTCTGAGCTGATGCCAGCTAGT +
Preference number: 6 (lower is better)
Translates to: IFRMKARSSCST*DNSESELMPAS
Trigger: ACTAGCTGGCATCAGCTCAGACTCGCTGTTGTCTCATGTGGAGCAGCTGCTCCGGGCCTTCATCCTGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376669.9
ENST00000376672.5
CDS GCA 72 bp GACGTCATGGTTTTTAGTGGTATCAGCCGGGGGTCATaGATGTGGACATCCTGCTCATCCGCCAGGATCCAG +
Preference number: 6 (lower is better)
Translates to: DVMVFSGISRGS*MWTSCSSARIQ
Trigger: CTGGATCCTGGCGGATGAGCAGGATGTCCACATGCATGACCCCCGGCTGATACCACTAAAAACCATGACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000235310.7
ENST00000376667.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS CCA 72 bp AACAGCGAGTCTGAGCTGATGGACAGCAGTGGAGGCTaGGTGATCTCAAAGACGAATTTCTCCACTGGGCGG +
Preference number: 6 (lower is better)
Translates to: NSESELMDSSGG*VISKTNFSTGR
Trigger: CCGCCCAGTGGAGAAATTCGTCTTTGAGATCACCCAGCCTCCACTGCTGTCCATCAGCTCAGACTCGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000235310.7
ENST00000376664.10
ENST00000376667.7
ENST00000376692.9
ENST00000445656.5
ENST00000456915.1
CDS CAA 72 bp CAGGGGAAATCCTTGATGACCTGGATCTTCTCCATGTaGCGAGTGGCGGCTTCTCTCGTGTGCACCAGGACT +
Preference number: 6 (lower is better)
Translates to: QGKSLMTWIFSM*RVAASLVCTRT
Trigger: AGTCCTGGTGCACACGAGAGAAGCCGCCACTCGCAACATGGAGAAGATCCAGGTCATCAAGGATTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000235310.7
ENST00000376667.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
CDS TCA 72 bp TCCCAGAGGAGGTGGACTCTCAGGGTTAGGAAGAGATaGGTCTCAGAACAGCCAAACATGGACCTGGGAACA +
Preference number: 6 (lower is better)
Translates to: SQRRWTLRVRKR*VSEQPNMDLGT
Trigger: TGTTCCCAGGTCCATGTTTGGCTGTTCTGAGACTCATCTCTTCCTAACCCTGAGAGTCCACCTCCTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376664.10
CDS CAA 90 bp TTCGGGTGGGCGCGAAGAAAACACAACGTTGATCTCCACGTTCCATaGGATCGCTACATATCTTCCCCCGAGGGCATTTCTCTCGCTTTA +
Preference number: 6 (lower is better)
Translates to: FGWARRKHNVDLHVP*DRYISSPEGISLAL
Trigger: TAAAGCGAGAGAAATGCCCTCGGGGGAAGATATGTAGCGATCCAATGGAACGTGGAGATCAACGTTGTGTTTTCTTCGCGCCCACCCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS GCA 72 bp GTGACTGTTCTCTTTATACAGATAAGTCAAGCGAGGTaGAGAAGGGTGAATAACCTGCCCGAGTCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: VTVLFIQISQAR*RRVNNLPESPS
Trigger: GCTGGGAGACTCGGGCAGGTTATTCACCCTTCTGCACCTCGCTTGACTTATCTGTATAAAGAGAACAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS CCA 72 bp CGCGAAGAAAACACAACGTTGATCTCCACGTTCCATTaGATCGCTACATATCTTCCCCCGAGGGCATTTCTC +
Preference number: 6 (lower is better)
Translates to: REENTTLISTFH*IATYLPPRAFL
Trigger: GAGAAATGCCCTCGGGGGAAGATATGTAGCGATCCAATGGAACGTGGAGATCAACGTTGTGTTTTCTTCGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS CAA 72 bp GCGCGAAGAAAACACAACGTTGATCTCCACGTTCCATaGGATCGCTACATATCTTCCCCCGAGGGCATTTCT +
Preference number: 6 (lower is better)
Translates to: ARRKHNVDLHVP*DRYISSPEGIS
Trigger: AGAAATGCCCTCGGGGGAAGATATGTAGCGATCCAATGGAACGTGGAGATCAACGTTGTGTTTTCTTCGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS TCA 72 bp CTTCAACTTCGGGTGGGCGCGAAGAAAACACAACGTTaGTCTCCACGTTCCATTGGATCGCTACATATCTTC +
Preference number: 6 (lower is better)
Translates to: LQLRVGAKKTQR*SPRSIGSLHIF
Trigger: GAAGATATGTAGCGATCCAATGGAACGTGGAGATCAACGTTGTGTTTTCTTCGCGCCCACCCGAAGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS GCA 72 bp TGGGTGATCTCAAAGACGAATTTCTCCACTGGGCGGTaGTCTTTATCCAAAATCACCACCACCACTTTCTCC +
Preference number: 6 (lower is better)
Translates to: WVISKTNFSTGR*SLSKITTTTFS
Trigger: GGAGAAAGTGGTGGTGGTGATTTTGGATAAAGAGCACCGCCCAGTGGAGAAATTCGTCTTTGAGATCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000235310.7
ENST00000376664.10
ENST00000376667.7
ENST00000376669.9
ENST00000376672.5
ENST00000376692.9
ENST00000445656.5
ENST00000456915.1
CDS CCA 72 bp GGAAGAGATGAGTCTCAGAACAGCCAAACATGGACCTaGGAACACAGACCAACCCGAGATAACCATGGAAAT +
Preference number: 6 (lower is better)
Translates to: GRDESQNSQTWT*EHRPTRDNHGN
Trigger: ATTTCCATGGTTATCTCGGGTTGGTCTGTGTTCCCAGGTCCATGTTTGGCTGTTCTGAGACTCATCTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376664.10
CDS CAA 72 bp CCTTCAACTTCGGGTGGGCGCGAAGAAAACACAACGTaGATCTCCACGTTCCATTGGATCGCTACATATCTT +
Preference number: 6 (lower is better)
Translates to: PSTSGGREENTT*ISTFHWIATYL
Trigger: AAGATATGTAGCGATCCAATGGAACGTGGAGATCAACGTTGTGTTTTCTTCGCGCCCACCCGAAGTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235310.7
CDS TCA 72 bp TGTCCGTGGATTATCTCAGTCCTGGGAGTAACTCCATaGGGCAGTTACTGTGACTGTTCTCTTTATACAGAT +
Preference number: 6 (lower is better)
Translates to: CPWIISVLGVTP*GSYCDCSLYTD
Trigger: ATCTGTATAAAGAGAACAGTCACAGTAACTGCCTCATGGAGTTACTCCCAGGACTGAGATAATCCACGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235310.7