Pregenerated sensors for MACROD2-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000227927Ensembl transcript IDs: ENST00000448536.1, ENST00000605675.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGCAGACAACACTTCCAGTAGGTGGGGAAATAGTGCCTCGGTTCTaGAAGGGGGATCTGGGTACCCACCAGAGCATACAGCTAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: QQTTLPVGGEIVPRF*KGDLGTHQSIQLMR Trigger: TCTCATTAGCTGTATGCTCTGGTGGGTACCCAGATCCCCCTTTCAGAACCGAGGCACTATTTCCCCACCTACTGGAAGTGTTGTCTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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| CDS CCA 90 bp | CCTACAGAGAGGATGATGAAGATGAACAGCTCTTGTCACTATCTTTaGAGCTGGAATTGTCTTCAGCTTCATTCTCTTCCCACTGTATAT | + |
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Preference number: 5 (lower is better) Translates to: PTERMMKMNSSCHYL*SWNCLQLHSLPTVY Trigger: ATATACAGTGGGAAGAGAATGAAGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATCCTCTCTGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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| CDS CCA 90 bp | AGATCAGAGAGGATGATGAAGATGAACAGCTCTTGTCACTATCTTTaGAGCTGGAATTGTCTTCAGCTTCATTCTCTTCCCACTGTATAT | + |
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Preference number: 5 (lower is better) Translates to: RSERMMKMNSSCHYL*SWNCLQLHSLPTVY Trigger: ATATACAGTGGGAAGAGAATGAAGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATCCTCTCTGATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605675.1 |
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| CDS CAA 72 bp | AGCAGGTCCTCGAGGATTCTAGTCTATCTCTTCTCCTaGGAGAGGGCAGCTTCCTGCACCAGCAGTCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SRSSRILVYLFS*ERAASCTSSQV Trigger: GACTTGACTGCTGGTGCAGGAAGCTGCCCTCTCCAAGGAGAAGAGATAGACTAGAATCCTCGAGGACCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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| CDS CCA 72 bp | AGCCGTGAGTCATCAGCAGACAACACTTCCAGTAGGTaGGGAAATAGTGCCTCGGTTCTGAAAGGGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: SRESSADNTSSR*GNSASVLKGGS Trigger: AGATCCCCCTTTCAGAACCGAGGCACTATTTCCCCACCTACTGGAAGTGTTGTCTGCTGATGACTCACGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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| CDS CAA 72 bp | AATGAGAAATCCTCCCAAGGCCTGACTGTGGTCTTTTaGCATCAAAGTCAATATTGCTCAGCTGCACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: NEKSSQGLTVVF*HQSQYCSAAPG Trigger: ACCTGGTGCAGCTGAGCAATATTGACTTTGATGCAAAAAGACCACAGTCAGGCCTTGGGAGGATTTCTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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| CDS CAA 72 bp | GATGCCTACAGAGAGGATGATGAAGATGAACAGCTCTaGTCACTATCTTTGGAGCTGGAATTGTCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: DAYREDDEDEQL*SLSLELELSSA Trigger: AGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATCCTCTCTGTAGGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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| CDS CAA 90 bp | GATGATGAAGATGAACAGCTCTTGTCACTATCTTTGGAGCTGGAATaGTCTTCAGCTTCATTCTCTTCCCACTGTATATGTGCTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: DDEDEQLLSLSLELE*SSASFSSHCICAPG Trigger: TCCAGGAGCACATATACAGTGGGAAGAGAATGAAGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448536.1 ENST00000605675.1 |
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| CDS CAA 90 bp | GCCTACAGAGAGGATGATGAAGATGAACAGCTCTTGTCACTATCTTaGGAGCTGGAATTGTCTTCAGCTTCATTCTCTTCCCACTGTATA | + |
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Preference number: 6 (lower is better) Translates to: AYREDDEDEQLLSLS*ELELSSASFSSHCI Trigger: TATACAGTGGGAAGAGAATGAAGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATCCTCTCTGTAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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| CDS GCA 72 bp | ATTGTCTTCAGCTTCATTCTCTTCCCACTGTATATGTaGTCCTGGAATGAGATCATCCATGGCTTCTACTGT | + |
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Preference number: 6 (lower is better) Translates to: IVFSFILFPLYM*SWNEIIHGFYC Trigger: ACAGTAGAAGCCATGGATGATCTCATTCCAGGAGCACATATACAGTGGGAAGAGAATGAAGCTGAAGACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448536.1 ENST00000605675.1 |
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| CDS CAA 72 bp | GAGGATGATGAAGATGAACAGCTCTTGTCACTATCTTaGGAGCTGGAATTGTCTTCAGCTTCATTCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: EDDEDEQLLSLS*ELELSSASFSS Trigger: GGAAGAGAATGAAGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATCCTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448536.1 ENST00000605675.1 |
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| CDS CAA 90 bp | CTAATTCAAGATGCCTACAGAGAGGATGATGAAGATGAACAGCTCTaGTCACTATCTTTGGAGCTGGAATTGTCTTCAGCTTCATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LIQDAYREDDEDEQL*SLSLELELSSASFS Trigger: AGAGAATGAAGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATCCTCTCTGTAGGCATCTTGAATTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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| CDS CAA 90 bp | AAGATCAGAGAGGATGATGAAGATGAACAGCTCTTGTCACTATCTTaGGAGCTGGAATTGTCTTCAGCTTCATTCTCTTCCCACTGTATA | + |
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Preference number: 6 (lower is better) Translates to: KIREDDEDEQLLSLS*ELELSSASFSSHCI Trigger: TATACAGTGGGAAGAGAATGAAGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATCCTCTCTGATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605675.1 |
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| CDS CAA 72 bp | ATAAAGATCAGAGAGGATGATGAAGATGAACAGCTCTaGTCACTATCTTTGGAGCTGGAATTGTCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: IKIREDDEDEQL*SLSLELELSSA Trigger: AGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATCCTCTCTGATCTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605675.1 |
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| CDS CAA 90 bp | ATTGCTCAGCTGCACCAGGTAGTCACGTATAAACATGGTGTATACTaGACCTTCAGAAAAATAGCTCGTTTTTATGTACCTAGAAACACA | + |
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Preference number: 6 (lower is better) Translates to: IAQLHQVVTYKHGVY*TFRKIARFYVPRNT Trigger: TGTGTTTCTAGGTACATAAAAACGAGCTATTTTTCTGAAGGTCAAGTATACACCATGTTTATACGTGACTACCTGGTGCAGCTGAGCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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| CDS CAA 90 bp | TGTAACTTCATAAAGATCAGAGAGGATGATGAAGATGAACAGCTCTaGTCACTATCTTTGGAGCTGGAATTGTCTTCAGCTTCATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CNFIKIREDDEDEQL*SLSLELELSSASFS Trigger: AGAGAATGAAGCTGAAGACAATTCCAGCTCCAAAGATAGTGACAAGAGCTGTTCATCTTCATCATCCTCTCTGATCTTTATGAAGTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605675.1 |
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| CDS CAA 90 bp | GCTCATTGCAGTAGCATACCTGAAGTTACAACAACACAGCAAAGATaGTCAATGGCATGTAACTTCATAAAGATCAGAGAGGATGATGAA | + |
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Preference number: 6 (lower is better) Translates to: AHCSSIPEVTTTQQR*SMACNFIKIREDDE Trigger: TTCATCATCCTCTCTGATCTTTATGAAGTTACATGCCATTGACAATCTTTGCTGTGTTGTTGTAACTTCAGGTATGCTACTGCAATGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605675.1 |
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| CDS CAA 72 bp | CTGCACCAGGTAGTCACGTATAAACATGGTGTATACTaGACCTTCAGAAAAATAGCTCGTTTTTATGTACCT | + |
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Preference number: 6 (lower is better) Translates to: LHQVVTYKHGVY*TFRKIARFYVP Trigger: AGGTACATAAAAACGAGCTATTTTTCTGAAGGTCAAGTATACACCATGTTTATACGTGACTACCTGGTGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000448536.1 |
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