RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MACROD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000172264

Ensembl transcript IDs: ENST00000217246.8, ENST00000378058.7, ENST00000402914.5, ENST00000407045.3, ENST00000462552.5, ENST00000463861.5, ENST00000464883.5, ENST00000477147.5, ENST00000483997.5, ENST00000486914.1, ENST00000490428.5, ENST00000492055.5, ENST00000494602.5, ENST00000497992.1, ENST00000642719.1, ENST00000684519.1

Found 470 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATATTGGTGATGATGCCTGGCATCCTCATGGTCGCCATCCCTTGTaGCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTGCCC +
Preference number: 1 (lower is better)
Translates to: DIGDDAWHPHGRHPL*PLYHWHLGFLVLLP
Trigger: GGGCAGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGACCATGAGGATGCCAGGCATCATCACCAATATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR CCA 90 bp ATCTGGCCTTATACTGGCTCTAGGATAGATATTGGTGATGATGCCTaGCATCCTCATGGTCGCCATCCCTTGTGCCCACTATACCACTGG +
Preference number: 1 (lower is better)
Translates to: IWPYTGSRIDIGDDA*HPHGRHPLCPLYHW
Trigger: CCAGTGGTATAGTGGGCACAAGGGATGGCGACCATGAGGATGCCAGGCATCATCACCAATATCTATCCTAGAGCCAGTATAAGGCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR TCA 90 bp AAGGCAGAACTGCAAGCAAAAGCTCTAATTTCCTGTAATTTCAAATaGGACCACTCTGTGGGCTGTCAAGCCTTGGGTGAAGACAGGATA +
Preference number: 1 (lower is better)
Translates to: KAELQAKALISCNFK*DHSVGCQALGEDRI
Trigger: TATCCTGTCTTCACCCAAGGCTTGACAGCCCACAGAGTGGTCTCATTTGAAATTACAGGAAATTAGAGCTTTTGCTTGCAGTTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR GCA 90 bp GCACTAACATTTGGGAGTCACAAGAAAAACGAGCTTCTAGCAGATTaGACTTGTCAAATACTTCACAAGAATGACGGCAACTTTCAATTG +
Preference number: 1 (lower is better)
Translates to: ALTFGSHKKNELLAD*TCQILHKNDGNFQL
Trigger: CAATTGAAAGTTGCCGTCATTCTTGTGAAGTATTTGACAAGTGCAATCTGCTAGAAGCTCGTTTTTCTTGTGACTCCCAAATGTTAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR CCA 90 bp TTTCCTGTAATTTCAAATGAGACCACTCTGTGGGCTGTCAAGCCTTaGGTGAAGACAGGATATTCTTTTATGGAAAACTCACAGCAATTT +
Preference number: 1 (lower is better)
Translates to: FPVISNETTLWAVKP*VKTGYSFMENSQQF
Trigger: AAATTGCTGTGAGTTTTCCATAAAAGAATATCCTGTCTTCACCCAAGGCTTGACAGCCCACAGAGTGGTCTCATTTGAAATTACAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR CCA 90 bp TTTTTCAACTGTAACTCATTACTGAGGCTAAGTAGCACTAACATTTaGGAGTCACAAGAAAAACGAGCTTCTAGCAGATTGCACTTGTCA +
Preference number: 1 (lower is better)
Translates to: FFNCNSLLRLSSTNI*ESQEKRASSRLHLS
Trigger: TGACAAGTGCAATCTGCTAGAAGCTCGTTTTTCTTGTGACTCCCAAATGTTAGTGCTACTTAGCCTCAGTAATGAGTTACAGTTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR CCA 90 bp AATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATaGCAGCACCAGCAAATAAAGGTTTTCTGTGTTCAGGTGTCTTTG +
Preference number: 1 (lower is better)
Translates to: NQSAFQIYFIVQPVQ*QHQQIKVFCVQVSL
Trigger: CAAAGACACCTGAACACAGAAAACCTTTATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR TCA 90 bp CCATATCAAACTGGAATAGCAACAGAAGGCCATAATCCCACATTATaGGGTCACGTAAATGTCATTCTTGCTGATGTCTTGATTTTATTA +
Preference number: 1 (lower is better)
Translates to: PYQTGIATEGHNPTL*GHVNVILADVLILL
Trigger: TAATAAAATCAAGACATCAGCAAGAATGACATTTACGTGACCTCATAATGTGGGATTATGGCCTTCTGTTGCTATTCCAGTTTGATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGCTCCACAGCGTGTGCTaGTATCTTCCCGAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWLHSVC*YLPELP
Trigger: GGGGAGCTCGGGAAGATAGCAGCACACGCTGTGGAG...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGAGAGACCCAGATGGCTaGCAGGGCCCACCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWRDPDG*QGPPFC
Trigger: ACAGAAGGGTGGGCCCTGGCAGCCATCTGGGTCTCT...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATACCCTTCAGGGTTTTCTaGGTGAGGGGACCAACCATT +
Preference number: 2 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIPFRVF*VRGPTI
Trigger: AATGGTTGGTCCCCTCACCCAGAAAACCCTGAAGGG...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTCTCCTCCACAGCGTGTaGTGCTATCTTCCCGAGCTC +
Preference number: 2 (lower is better)
Translates to: SPSLVPTIPLASWVFSTALLHSV*CYLPEL
Trigger: GAGCTCGGGAAGATAGCAGCACACGCTGTGGAGGAG...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAGCCCATTTTCTATCCTaGCTCCTCTGTCTGGGGATT +
Preference number: 2 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIAHFLS*LLCLGI
Trigger: AATCCCCAGACAGAGGAGGCAGGATAGAAAATGGGC...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATGGGCTGTCAAGCCTTaGGTGAAGACAGGATATTCT +
Preference number: 2 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIWAVKP*VKTGYS
Trigger: AGAATATCCTGTCTTCACCCAAGGCTTGACAGCCCA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTCAATCAAGCCACTGTaGCCCTGGGGCAAAGTTGTA +
Preference number: 2 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWSIKPL*PWGKVV
Trigger: TACAACTTTGCCCCAGGGTCACAGTGGCTTGATTGA...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTAATGAGACCACTCTGTaGGCTGTCAAGCCTTGGGTG +
Preference number: 2 (lower is better)
Translates to: SPSLVPTIPLASWVFSTANETTL*AVKPWV
Trigger: CACCCAAGGCTTGACAGCCCACAGAGTGGTCTCATT...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTTCCTCCCCTTCCTTTaGATAAACCACTGTGTGACC +
Preference number: 2 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWFLPFL*INHCVT
Trigger: GGTCACACAGTGGTTTATTCAAAGGAAGGGGAGGAA...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATACATCCTTTACAGTTATaGAGCAGAGAGTCACCTCTT +
Preference number: 2 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIHPLQL*SRESPL
Trigger: AAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATG...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAAGGAAGAGACCCAGATaGCTGCCAGGGCCCACCCTT +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKRKRPR*LPGPTL
Trigger: AAGGGTGGGCCCTGGCAGCCATCTGGGTCTCTTCCT...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGATGCACCTGCCACCATaGTTAGGAAGGAAGAGACCC +
Preference number: 2 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKMHLPP*LGRKRP
Trigger: GGGTCTCTTCCTTCCTAACCATGGTGGCAGGTGCAT...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR CAA 90 bp ATAGATATTGGTGATGATGCCTGGCATCCTCATGGTCGCCATCCCTaGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTG +
Preference number: 2 (lower is better)
Translates to: IDIGDDAWHPHGRHP*CPLYHWHLGFLVLL
Trigger: CAGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGACCATGAGGATGCCAGGCATCATCACCAATATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATACTCCACAGCGTGTGCTaGTATCTTCCCGAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQILHSVC*YLPELP
Trigger: GGGGAGCTCGGGAAGATAGCAGCACACGCTGTGGAG...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAACTCCTCCACAGCGTGTaGTGCTATCTTCCCGAGCTC +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKLLHSV*CYLPEL
Trigger: GAGCTCGGGAAGATAGCAGCACACGCTGTGGAGGAG...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTGGTTTCCGAGGCTTTTaGCCATTTTCTATCCTGCCT +
Preference number: 2 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAGFRGF*PFSILP
Trigger: AGGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACC...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAAACCCGGGGAGGCTGTaGGAAGTAGGCATCTGGCCT +
Preference number: 2 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQINPGRL*EVGIWP
Trigger: AGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGAGAGACCCAGATGGCTaGCAGGGCCCACCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: AGKSISFSNLFHCTACAMRDPDG*QGPPFC
Trigger: ACAGAAGGGTGGGCCCTGGCAGCCATCTGGGTCTCT...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGGTCGCCATCCCTTGTaGCCACTATACCACTGGCAT +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKGRHPL*PLYHWH
Trigger: ATGCCAGTGGTATAGTGGGCACAAGGGATGGCGACC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGAACCCGGGGAGGCTGTaGGAAGTAGGCATCTGGCCT +
Preference number: 2 (lower is better)
Translates to: AGKSISFSNLFHCTACAMNPGRL*EVGIWP
Trigger: AGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTGCTGCTGGGCTCATTaGTTCCTAAAATTTATCCTG +
Preference number: 2 (lower is better)
Translates to: SPSLVPTIPLASWVFSTACCWAH*FLKFIL
Trigger: CAGGATAAATTTTAGGAATCAATGAGCCCAGCAGCA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGGTGCCTTGGGAACCCTaGAGAAAATATTTTCACCTC +
Preference number: 2 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKVPWEP*RKYFHL
Trigger: GAGGTGAAAATATTTTCTTCAGGGTTCCCAAGGCAC...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCAGAGACCCAGATGGCTaGCAGGGCCCACCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSRDPDG*QGPPFC
Trigger: ACAGAAGGGTGGGCCCTGGCAGCCATCTGGGTCTCT...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAGGTCGCCATCCCTTGTaGCCACTATACCACTGGCAT +
Preference number: 2 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIGRHPL*PLYHWH
Trigger: ATGCCAGTGGTATAGTGGGCACAAGGGATGGCGACC...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAACCCTTCAGGGTTTTCTaGGTGAGGGGACCAACCATT +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKPFRVF*VRGPTI
Trigger: AATGGTTGGTCCCCTCACCCAGAAAACCCTGAAGGG...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTGGGAAGTAGGCATCTaGCCTTATACTGGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFWEVGI*PYTGSR
Trigger: CCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTCTCCACAGCGTGTGCTaGTATCTTCCCGAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: ITFILLEFLGRENSLLPLLHSVC*YLPELP
Trigger: GGGGAGCTCGGGAAGATAGCAGCACACGCTGTGGAG...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAACAGACCTTTTCCAAGTaGTTTCCGAGGCTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKQTFSK*FPRLLP
Trigger: GGGCAAAAGCCTCGGAAACCACTTGGAAAAGGTCTG...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGTTCTCATTAGCCACTTaGAACAAATTGTGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKFSLAT*NKLCLG
Trigger: CCCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAA...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTACCCTTCAGGGTTTTCTaGGTGAGGGGACCAACCATT +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILPFRVF*VRGPTI
Trigger: AATGGTTGGTCCCCTCACCCAGAAAACCCTGAAGGG...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGGAGAATGCCAGGGCTaGATAATTTCCATCCTGGCT +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKGECQG*IISILA
Trigger: AGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGCCAGGATACACATGTaGGTGTTCAATCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKARIHM*VFNQAT
Trigger: AGTGGCTTGATTGAACACTCACATGTGTATCCTGGC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATTCCTCCCCTTCCTTTaGATAAACCACTGTGTGACC +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKFLPFL*INHCVT
Trigger: GGTCACACAGTGGTTTATTCAAAGGAAGGGGAGGAA...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAACTGGTAGTCTCCATGTaGAGACCTCATGAACCAAGT +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKLVVSM*RPHEPS
Trigger: ACTTGGTTCATGAGGTCTTCACATGGAGACTACCAG...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTCCTGTAATTTCAAATaGGACCACTCTGTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFSCNFK*DHSVGC
Trigger: ACAGCCCACAGAGTGGTCTCATTTGAAATTACAGGA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAACTGAAAACAATGACATaGCTTTGGAACCCGGGGAGG +
Preference number: 2 (lower is better)
Translates to: LLTLLFFKAKPTCATYRELKTMT*LWNPGR
Trigger: CCTCCCCGGGTTCCAAAGTCATGTCATTGTTTTCAG...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATACTGAAAACAATGACATaGCTTTGGAACCCGGGGAGG +
Preference number: 2 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQILKTMT*LWNPGR
Trigger: CCTCCCCGGGTTCCAAAGTCATGTCATTGTTTTCAG...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTACAGACCTTTTCCAAGTaGTTTCCGAGGCTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILQTFSK*FPRLLP
Trigger: GGGCAAAAGCCTCGGAAACCACTTGGAAAAGGTCTG...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATGGGCTGTCAAGCCTTaGGTGAAGACAGGATATTCT +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKWAVKP*VKTGYS
Trigger: AGAATATCCTGTCTTCACCCAAGGCTTGACAGCCCA...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGAATGAGACCACTCTGTaGGCTGTCAAGCCTTGGGTG +
Preference number: 2 (lower is better)
Translates to: AGKSISFSNLFHCTACAMNETTL*AVKPWV
Trigger: CACCCAAGGCTTGACAGCCCACAGAGTGGTCTCATT...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCATACCACTGGCATCTTaGGTTTTTAGTACTGCTGCC +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFIPLAS*VFSTAA
Trigger: GGCAGCAGTACTAAAAACCCAAGATGCCAGTGGTAT...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGTCAATCAAGCCACTGTaGCCCTGGGGCAAAGTTGTA +
Preference number: 2 (lower is better)
Translates to: AGKSISFSNLFHCTACAMSIKPL*PWGKVV
Trigger: TACAACTTTGCCCCAGGGTCACAGTGGCTTGATTGA...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGTGCCTTGGGAACCCTaGAGAAAATATTTTCACCTC +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKVPWEP*RKYFHL
Trigger: GAGGTGAAAATATTTTCTTCAGGGTTCCCAAGGCAC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTACTGGTAGTCTCCATGTaGAGACCTCATGAACCAAGT +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILLVVSM*RPHEPS
Trigger: ACTTGGTTCATGAGGTCTTCACATGGAGACTACCAG...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCCCATTGAATCAGCCTTaGACTTGGCATAAACAAGTG +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFPLNQP*TWHKQV
Trigger: CACTTGTTTATGCCAAGTTCAAGGCTGATTCAATGG...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATAATGCCTGAAAGATaGGTCAACATGGGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LLTLLFFKAKPTCATYREIMPER*VNMGPS
Trigger: GGAGGGACCCATGTTGACGCATCTTTCAGGCATTAT...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAATAATGCCTGAAAGATaGGTCAACATGGGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILIMPER*VNMGPS
Trigger: GGAGGGACCCATGTTGACGCATCTTTCAGGCATTAT...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAATAATGCCTGAAAGATaGGTCAACATGGGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIIMPER*VNMGPS
Trigger: GGAGGGACCCATGTTGACGCATCTTTCAGGCATTAT...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAGGTTTCCGAGGCTTTTaGCCATTTTCTATCCTGCCT +
Preference number: 2 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIGFRGF*PFSILP
Trigger: AGGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACC...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCCATCCTTTACAGTTATaGAGCAGAGAGTCACCTCTT +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFHPLQL*SRESPL
Trigger: AAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATG...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTATCATTGTACAGCCTGTaGAATGGCAGCACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILSLYSL*NGSTSK
Trigger: TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGA...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTATGCACCTGCCACCATaGTTAGGAAGGAAGAGACCC +
Preference number: 2 (lower is better)
Translates to: LLFFKAKPTCATYREMSFMHLPP*LGRKRP
Trigger: GGGTCTCTTCCTTCCTAACCATGGTGGCAGGTGCAT...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTATGGGCTGTCAAGCCTTaGGTGAAGACAGGATATTCT +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILWAVKP*VKTGYS
Trigger: AGAATATCCTGTCTTCACCCAAGGCTTGACAGCCCA...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTGCCCACTATACCACTaGCATCTTGGGTTTTTAGTA +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFCPLYH*HLGFLV
Trigger: TACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCGCTTCCATATCAAACTaGAATAGCAACAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFASISN*NSNRRP
Trigger: TGGCCTTCTGTTGCTATTCCAGTTTGATATGGAAGC...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATATACAAGGATAATGCCTaGAAGATGCGTCAACATGGG +
Preference number: 2 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIYKDNA*KMRQHG
Trigger: CCCATGTTGACGCATCTTTCAGGCATTATCCTTGTA...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATCCTGTAATTTCAAATaGGACCACTCTGTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: LLTLLFFKAKPTCATYRESCNFK*DHSVGC
Trigger: ACAGCCCACAGAGTGGTCTCATTTGAAATTACAGGA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR CAA 90 bp TCCATCCTGGCTGTTTCTAGCAAGGACATTAGGTCTCTTCCATCATaGTTCATTAGAAAATCTCTGTCCCTCTGTTTCCCTCATGTTTTT +
Preference number: 2 (lower is better)
Translates to: SILAVSSKDIRSLPS*FIRKSLSLCFPHVF
Trigger: AAAAACATGAGGGAAACAGAGGGACAGAGATTTTCTAATGAACAATGATGGAAGAGACCTAATGTCCTTGCTAGAAACAGCCAGGATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGTACAAGGATAATGCCTaGAAGATGCGTCAACATGGG +
Preference number: 2 (lower is better)
Translates to: AGKSISFSNLFHCTACAMYKDNA*KMRQHG
Trigger: CCCATGTTGACGCATCTTTCAGGCATTATCCTTGTA...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTTCAATCAAGCCACTGTaGCCCTGGGGCAAAGTTGTA +
Preference number: 2 (lower is better)
Translates to: ITFILLEFLGRENSLLPLSIKPL*PWGKVV
Trigger: TACAACTTTGCCCCAGGGTCACAGTGGCTTGATTGA...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCGCCAGGATACACATGTaGGTGTTCAATCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSARIHM*VFNQAT
Trigger: AGTGGCTTGATTGAACACTCACATGTGTATCCTGGC...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTTTCCTCCCCTTCCTTTaGATAAACCACTGTGTGACC +
Preference number: 2 (lower is better)
Translates to: LLFFKAKPTCATYREMSFFLPFL*INHCVT
Trigger: GGTCACACAGTGGTTTATTCAAAGGAAGGGGAGGAA...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATATGCTGCTGGGCTCATTaGTTCCTAAAATTTATCCTG +
Preference number: 2 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQICCWAH*FLKFIL
Trigger: CAGGATAAATTTTAGGAATCAATGAGCCCAGCAGCA...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAACTTGGCATAAACAAGTaGCAGCATTTAAACACAGGC +
Preference number: 2 (lower is better)
Translates to: LLTLLFFKAKPTCATYRELGINK*QHLNTG
Trigger: GCCTGTGTTTAAATGCTGTCACTTGTTTATGCCAAG...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAACCATTGAATCAGCCTTaGACTTGGCATAAACAAGTG +
Preference number: 2 (lower is better)
Translates to: LLTLLFFKAKPTCATYREPLNQP*TWHKQV
Trigger: CACTTGTTTATGCCAAGTTCAAGGCTGATTCAATGG...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTACCATTGAATCAGCCTTaGACTTGGCATAAACAAGTG +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILPLNQP*TWHKQV
Trigger: CACTTGTTTATGCCAAGTTCAAGGCTGATTCAATGG...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCAATACTTCACAAGAATaGCGGCAACTTTCAATTGAG +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFNTSQE*RQLSIE
Trigger: CTCAATTGAAAGTTGCCGTCATTCTTGTGAAGTATT...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAACATCCTTTACAGTTATaGAGCAGAGAGTCACCTCTT +
Preference number: 2 (lower is better)
Translates to: LLTLLFFKAKPTCATYREHPLQL*SRESPL
Trigger: AAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATG...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGATACCACTGGCATCTTaGGTTTTTAGTACTGCTGCC +
Preference number: 2 (lower is better)
Translates to: AGKSISFSNLFHCTACAMIPLAS*VFSTAA
Trigger: GGCAGCAGTACTAAAAACCCAAGATGCCAGTGGTAT...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAGCTTCCATATCAAACTaGAATAGCAACAGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILASISN*NSNRRP
Trigger: TGGCCTTCTGTTGCTATTCCAGTTTGATATGGAAGC...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCAGTAGCACTAACATTTaGGAGTCACAAGAAAAACGA +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFSSTNI*ESQEKR
Trigger: TCGTTTTTCTTGTGACTCCCAAATGTTAGTGCTACT...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTGCCAGGATACACATGTaGGTGTTCAATCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: ITFILLEFLGRENSLLPLARIHM*VFNQAT
Trigger: AGTGGCTTGATTGAACACTCACATGTGTATCCTGGC...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTCTGGTAGTCTCCATGTaGAGACCTCATGAACCAAGT +
Preference number: 2 (lower is better)
Translates to: ITFILLEFLGRENSLLPLLVVSM*RPHEPS
Trigger: ACTTGGTTCATGAGGTCTTCACATGGAGACTACCAG...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAAATACTTCACAAGAATaGCGGCAACTTTCAATTGAG +
Preference number: 2 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKNTSQE*RQLSIE
Trigger: CTCAATTGAAAGTTGCCGTCATTCTTGTGAAGTATT...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTCAGTATCACAGACAGTaGTTCGGATGCCTTCTTTGT +
Preference number: 2 (lower is better)
Translates to: LLFFKAKPTCATYREMSFQYHRQ*FGCLLC
Trigger: ACAAAGAAGGCATCCGAATCACTGTCTGTGATACTG...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCGAAACTGTCAATATTTaGATGACATCGTTTCTTGGA +
Preference number: 2 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFETVNI*MTSFLG
Trigger: TCCAAGAAACGATGTCATCCAAATATTGACAGTTTC...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAAGCTGTATTGGAGTTTaGTTGGAAATTGACATCCAG +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILSCIGV*LEIDIQ
Trigger: CTGGATGTCAATTTCCAACCAAACTCCAATACAGCT...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAAGCTGTATTGGAGTTTaGTTGGAAATTGACATCCAG +
Preference number: 2 (lower is better)
Translates to: LLTLLFFKAKPTCATYRESCIGV*LEIDIQ
Trigger: CTGGATGTCAATTTCCAACCAAACTCCAATACAGCT...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTGCTGCTGGGCTCATTaGTTCCTAAAATTTATCCTG +
Preference number: 2 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSCCWAH*FLKFIL
Trigger: CAGGATAAATTTTAGGAATCAATGAGCCCAGCAGCA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTTCCTGTAATTTCAAATaGGACCACTCTGTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: ITFILLEFLGRENSLLPLSCNFK*DHSVGC
Trigger: ACAGCCCACAGAGTGGTCTCATTTGAAATTACAGGA...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGATTCAGGAGTCGGGCTaGAGATATTTATTCCTCATT +
Preference number: 2 (lower is better)
Translates to: AGKSISFSNLFHCTACAMIQESG*RYLFLI
Trigger: AATGAGGAATAAATATCTTCAGCCCGACTCCTGAAT...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR TCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAAGTTTGGTTGGAAATTaGCATCCAGAATTTATGTGC +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILSLVGN*HPEFMC
Trigger: GCACATAAATTCTGGATGTCAATTTCCAACCAAACT...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCACTTGGAACAAATTGTaGCTTGGGAACCCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSTWNKL*LGNPEE
Trigger: TTCTTCAGGGTTCCCAAGGCACAATTTGTTCCAAGT...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTACTTGGAACAAATTGTaGCTTGGGAACCCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: LLFFKAKPTCATYREMSFTWNKL*LGNPEE
Trigger: TTCTTCAGGGTTCCCAAGGCACAATTTGTTCCAAGT...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATGTTTGGGTCCTAAATaGACTGCCCCTTTTCTTAGC +
Preference number: 2 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSCLGPK*TAPFLS
Trigger: GCTAAGAAAAGGGGCAGTGCATTTAGGACCCAAACA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTTCCTGTAACTCTTCATaGCACATAGCTGTATTGGAG +
Preference number: 2 (lower is better)
Translates to: LLFFKAKPTCATYREMSFSCNSS*HIAVLE
Trigger: CTCCAATACAGCTATGTGGCATGAAGAGTTACAGGA...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTTCTCATTAGCCACTTaGAACAAATTGTGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSFSLAT*NKLCLG
Trigger: CCCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTATACCACTGGCATCTTaGGTTTTTAGTACTGCTGCC +
Preference number: 2 (lower is better)
Translates to: ITFILLEFLGRENSLLPLIPLAS*VFSTAA
Trigger: GGCAGCAGTACTAAAAACCCAAGATGCCAGTGGTAT...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAAGTAGCACTAACATTTaGGAGTCACAAGAAAAACGA +
Preference number: 2 (lower is better)
Translates to: EAVQHLNAGLTKEARIILSSTNI*ESQEKR
Trigger: TCGTTTTTCTTGTGACTCCCAAATGTTAGTGCTACT...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR GCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAACTTGGAACAAATTGTaGCTTGGGAACCCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSTWNKL*LGNPEE
Trigger: TTCTTCAGGGTTCCCAAGGCACAATTTGTTCCAAGT...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTTGCCCACTATACCACTaGCATCTTGGGTTTTTAGTA +
Preference number: 2 (lower is better)
Translates to: ITFILLEFLGRENSLLPLCPLYH*HLGFLV
Trigger: TACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCA...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTGTATTGGAGTTTGGTTaGAAATTGACATCCAGAATT +
Preference number: 2 (lower is better)
Translates to: LLFFKAKPTCATYREMSFVLEFG*KLTSRI
Trigger: AATTCTGGATGTCAATTTCCAACCAAACTCCAATAC...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAGAAACTGTCAATATTTaGATGACATCGTTTCTTGGA +
Preference number: 2 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSETVNI*MTSFLG
Trigger: TCCAAGAAACGATGTCATCCAAATATTGACAGTTTC...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATACATGGTCGCCATCCCTaGTGCCCACTATACCACTGG +
Preference number: 3 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIHGRHP*CPLYHW
Trigger: CCAGTGGTATAGTGGGCACAAGGGATGGCGACCATG...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR GCA 72 bp GATGATGCCTGGCATCCTCATGGTCGCCATCCCTTGTaGCCACTATACCACTGGCATCTTGGGTTTTTAGTA +
Preference number: 3 (lower is better)
Translates to: DDAWHPHGRHPL*PLYHWHLGFLV
Trigger: TACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGACCATGAGGATGCCAGGCATCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR CCA 72 bp CTTTGGAACCCGGGGAGGCTGTGGGAAGTAGGCATCTaGCCTTATACTGGCTCTAGGATAGATATTGGTGAT +
Preference number: 3 (lower is better)
Translates to: LWNPGRLWEVGI*PYTGSRIDIGD
Trigger: ATCACCAATATCTATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTTCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTGCCACTTGGAACAAATaGTGCCTTGGGAACCCTGAA +
Preference number: 3 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAATWNK*CLGNPE
Trigger: TTCAGGGTTCCCAAGGCACAATTTGTTCCAAGTGGC...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR CCA 72 bp TATACTGGCTCTAGGATAGATATTGGTGATGATGCCTaGCATCCTCATGGTCGCCATCCCTTGTGCCCACTA +
Preference number: 3 (lower is better)
Translates to: YTGSRIDIGDDA*HPHGRHPLCPL
Trigger: TAGTGGGCACAAGGGATGGCGACCATGAGGATGCCAGGCATCATCACCAATATCTATCCTAGAGCCAGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGGGAACAAATTGTGCCTaGGGAACCCTGAAGAAAATA +
Preference number: 3 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWGTNCA*GTLKKI
Trigger: TATTTTCTTCAGGGTTCCCAAGGCACAATTTGTTCC...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTTCATAGGCATATGTTaGGGTCCTAAATGCACTGCC +
Preference number: 3 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAFIGIC*GPKCTA
Trigger: GGCAGTGCATTTAGGACCCAAACATATGCCTATGAA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGCTGCTGCTGGGCTCATaGATTCCTAAAATTTATCCT +
Preference number: 3 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKLLLGS*IPKIYP
Trigger: AGGATAAATTTTAGGAATCAATGAGCCCAGCAGCAG...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATGGTTTCCGAGGCTTTaGCCCATTTTCTATCCTGCC +
Preference number: 3 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKWFPRL*PIFYPA
Trigger: GGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACCA...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAGTGGGCTGTCAAGCCTaGGGTGAAGACAGGATATTC +
Preference number: 3 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIVGCQA*GEDRIF
Trigger: GAATATCCTGTCTTCACCCAAGGCTTGACAGCCCAC...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTCATGGTCGCCATCCCTaGTGCCCACTATACCACTGG +
Preference number: 3 (lower is better)
Translates to: LLFFKAKPTCATYREMSFHGRHP*CPLYHW
Trigger: CCAGTGGTATAGTGGGCACAAGGGATGGCGACCATG...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR TCA 72 bp CTGCAAGCAAAAGCTCTAATTTCCTGTAATTTCAAATaGGACCACTCTGTGGGCTGTCAAGCCTTGGGTGAA +
Preference number: 3 (lower is better)
Translates to: LQAKALISCNFK*DHSVGCQALGE
Trigger: TTCACCCAAGGCTTGACAGCCCACAGAGTGGTCTCATTTGAAATTACAGGAAATTAGAGCTTTTGCTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCCACTTGGAACAAATaGTGCCTTGGGAACCCTGAA +
Preference number: 3 (lower is better)
Translates to: AGKSISFSNLFHCTACAMATWNK*CLGNPE
Trigger: TTCAGGGTTCCCAAGGCACAATTTGTTCCAAGTGGC...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTTTCTCATTAGCCACTaGGAACAAATTGTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFFLISH*EQIVPW
Trigger: CCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAAA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTGTGGGCTGTCAAGCCTaGGGTGAAGACAGGATATTC +
Preference number: 3 (lower is better)
Translates to: LLFFKAKPTCATYREMSFVGCQA*GEDRIF
Trigger: GAATATCCTGTCTTCACCCAAGGCTTGACAGCCCAC...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR TCA 72 bp TCCTCTGTCTGGGGATTATACTGCTGCTGGGCTCATTaGTTCCTAAAATTTATCCTGCAGCTTATCAAACCA +
Preference number: 3 (lower is better)
Translates to: SSVWGLYCCWAH*FLKFILQLIKP
Trigger: TGGTTTGATAAGCTGCAGGATAAATTTTAGGAATCAATGAGCCCAGCAGCAGTATAATCCCCAGACAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAACTGCTGCTGGGCTCATaGATTCCTAAAATTTATCCT +
Preference number: 3 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKLLLGS*IPKIYP
Trigger: AGGATAAATTTTAGGAATCAATGAGCCCAGCAGCAG...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTTGGTTTCCGAGGCTTTaGCCCATTTTCTATCCTGCC +
Preference number: 3 (lower is better)
Translates to: LLFFKAKPTCATYREMSFWFPRL*PIFYPA
Trigger: GGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACCA...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATTCATAGGCATATGTTaGGGTCCTAAATGCACTGCC +
Preference number: 3 (lower is better)
Translates to: LLTLLFFKAKPTCATYREFIGIC*GPKCTA
Trigger: GGCAGTGCATTTAGGACCCAAACATATGCCTATGAA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTGTGGGCTGTCAAGCCTaGGGTGAAGACAGGATATTC +
Preference number: 3 (lower is better)
Translates to: ITFILLEFLGRENSLLPLVGCQA*GEDRIF
Trigger: GAATATCCTGTCTTCACCCAAGGCTTGACAGCCCAC...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR TCA 72 bp ACTGGAATAGCAACAGAAGGCCATAATCCCACATTATaGGGTCACGTAAATGTCATTCTTGCTGATGTCTTG +
Preference number: 3 (lower is better)
Translates to: TGIATEGHNPTL*GHVNVILADVL
Trigger: CAAGACATCAGCAAGAATGACATTTACGTGACCTCATAATGTGGGATTATGGCCTTCTGTTGCTATTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATGGTTTCCGAGGCTTTaGCCCATTTTCTATCCTGCC +
Preference number: 3 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSWFPRL*PIFYPA
Trigger: GGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACCA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAGGAACAAATTGTGCCTaGGGAACCCTGAAGAAAATA +
Preference number: 3 (lower is better)
Translates to: EAVQHLNAGLTKEARIILGTNCA*GTLKKI
Trigger: TATTTTCTTCAGGGTTCCCAAGGCACAATTTGTTCC...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGTTCATAGGCATATGTTaGGGTCCTAAATGCACTGCC +
Preference number: 3 (lower is better)
Translates to: AGKSISFSNLFHCTACAMFIGIC*GPKCTA
Trigger: GGCAGTGCATTTAGGACCCAAACATATGCCTATGAA...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCAGAAACTGTCAATATTaGGATGACATCGTTTCTTGG +
Preference number: 3 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFRNCQY*DDIVSW
Trigger: CCAAGAAACGATGTCATCCAAATATTGACAGTTTCT...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGACGGCAACTTTCAATaGAGTTATAAAGATGGCATG +
Preference number: 3 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKDGNFQ*SYKDGM
Trigger: CATGCCATCTTTATAACTCAATTGAAAGTTGCCGTC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCAGGTCTCTTCCATCATaGTTCATTAGAAAATCTCTG +
Preference number: 3 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFRSLPS*FIRKSL
Trigger: CAGAGATTTTCTAATGAACAATGATGGAAGAGACCT...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATGCCACATAGCTGTATaGGAGTTTGGTTGGAAATTG +
Preference number: 3 (lower is better)
Translates to: LLTLLFFKAKPTCATYRECHIAV*EFGWKL
Trigger: CAATTTCCAACCAAACTCCAATACAGCTATGTGGCA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR GCA 72 bp GAAAAGACAGAAATTACAAGGATAATGCCTGAAAGATaGGTCAACATGGGTCCCTCCACCAAATTAAAGGAA +
Preference number: 3 (lower is better)
Translates to: EKTEITRIMPER*VNMGPSTKLKE
Trigger: TTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAATTTCTGTCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR CCA 72 bp TGTAACTCATTACTGAGGCTAAGTAGCACTAACATTTaGGAGTCACAAGAAAAACGAGCTTCTAGCAGATTG +
Preference number: 3 (lower is better)
Translates to: CNSLLRLSSTNI*ESQEKRASSRL
Trigger: CAATCTGCTAGAAGCTCGTTTTTCTTGTGACTCCCAAATGTTAGTGCTACTTAGCCTCAGTAATGAGTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAAATATTTTCACCTCATaGTCCAGACCTTTTCCAAGT +
Preference number: 3 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQINIFTS*SRPFPS
Trigger: ACTTGGAAAAGGTCTGGACAATGAGGTGAAAATATT...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTTTCTCATTAGCCACTaGGAACAAATTGTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSFLISH*EQIVPW
Trigger: CCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAAA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAAGAAACTGTCAATATTaGGATGACATCGTTTCTTGG +
Preference number: 3 (lower is better)
Translates to: LLTLLFFKAKPTCATYRERNCQY*DDIVSW
Trigger: CCAAGAAACGATGTCATCCAAATATTGACAGTTTCT...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATCTAGCAGATTGCACTaGTCAAATACTTCACAAGAA +
Preference number: 3 (lower is better)
Translates to: LLTLLFFKAKPTCATYRESSRLH*SNTSQE
Trigger: TTCTTGTGAAGTATTTGACAAGTGCAATCTGCTAGA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGAATATTTTCACCTCATaGTCCAGACCTTTTCCAAGT +
Preference number: 3 (lower is better)
Translates to: AGKSISFSNLFHCTACAMNIFTS*SRPFPS
Trigger: ACTTGGAAAAGGTCTGGACAATGAGGTGAAAATATT...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATTTCTCATTAGCCACTaGGAACAAATTGTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSFLISH*EQIVPW
Trigger: CCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAAA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTGACGGCAACTTTCAATaGAGTTATAAAGATGGCATG +
Preference number: 3 (lower is better)
Translates to: LLFFKAKPTCATYREMSFDGNFQ*SYKDGM
Trigger: CATGCCATCTTTATAACTCAATTGAAAGTTGCCGTC...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTAATATTTTCACCTCATaGTCCAGACCTTTTCCAAGT +
Preference number: 3 (lower is better)
Translates to: LLFFKAKPTCATYREMSFNIFTS*SRPFPS
Trigger: ACTTGGAAAAGGTCTGGACAATGAGGTGAAAATATT...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTTTTCAGGAGGAGCTTTaGATATTCATAGGCATATGT +
Preference number: 3 (lower is better)
Translates to: LLFFKAKPTCATYREMSFFQEEL*IFIGIC
Trigger: ACATATGCCTATGAATATCAAAAGCTCCTCCTGAAA...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTGACGGCAACTTTCAATaGAGTTATAAAGATGGCATG +
Preference number: 3 (lower is better)
Translates to: ITFILLEFLGRENSLLPLDGNFQ*SYKDGM
Trigger: CATGCCATCTTTATAACTCAATTGAAAGTTGCCGTC...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTTCTAGCAGATTGCACTaGTCAAATACTTCACAAGAA +
Preference number: 3 (lower is better)
Translates to: LLFFKAKPTCATYREMSFSSRLH*SNTSQE
Trigger: TTCTTGTGAAGTATTTGACAAGTGCAATCTGCTAGA...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
3UTR GCA 72 bp GAAACAAACAGATTTAGAAGCAGTCCAGCATTTAAATaGCGGTTTAACAAAAGAGGCACGTATTATCCTATT +
Preference number: 3 (lower is better)
Translates to: ETNRFRSSPAFK*RFNKRGTYYPI
Trigger: AATAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTCTAAATCTGTTTGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAAACCCGGGGAGGCTGTaGGAAGTAGGCATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRINPGRL*EVGIWP
Trigger: AGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTCTCCACAGCGTGTGCTaGTATCTTCCCGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTALHSVC*YLPELP
Trigger: GGGGAGCTCGGGAAGATAGCAGCACACGCTGTGGAG...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAATGGCCCCTGGCTATTaGCCCTACAGTATGGATGAC +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIMAPGY*PYSMDD
Trigger: GTCATCCATACTGTAGGGCCAATAGCCAGGGGCCAT...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR TCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTTCAACTGCCTCTTCTaGAGCAGGGCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAFNCLF*SRAGHS
Trigger: ACTGTGCCCGGCCCTGCTTCAGAAGAGGCAGTTGAA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAGAGGCCTTGCGATGCTaGGGATTGTCATTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIEALRC*GLSFSS
Trigger: GGAACTAAATGACAATCCTCAGCATCGCAAGGCCTC...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGCTTCGCTTCATCTTGTaGCCCTGCATCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWLRFIL*PCIRTW
Trigger: CCAGGTCCTGATGCAGGGGCACAAGATGAAGCGAAG...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTGGGTACATGTTGCCGTaGGGGTGGCTGGCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAGYMLP*GWLALS
Trigger: GCTTAAAGCCAGCCACCCCCACGGCAACATGTACCC...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGAGGAAGAGACCCAGATaGCTGCCAGGGCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKRKRPR*LPGPTL
Trigger: AAGGGTGGGCCCTGGCAGCCATCTGGGTCTCTTCCT...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAGCCAGGATACACATGTaGGTGTTCAATCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIARIHM*VFNQAT
Trigger: AGTGGCTTGATTGAACACTCACATGTGTATCCTGGC...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATTCCTCCCCTTCCTTTaGATAAACCACTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIFLPFL*INHCVT
Trigger: GGTCACACAGTGGTTTATTCAAAGGAAGGGGAGGAA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAGGAATCACTTCTGGTTaGTCCACAATCACGGCATCT +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIGITSG*STITAS
Trigger: AGATGCCGTGATTGTGGAGCAACCAGAAGTGATTCC...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGCTGCAGCAGGCTCGTTaGGAAAGCCATAAATGCCTG +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWLQQAR*ESHKCL
Trigger: CAGGCATTTATGGCTTTCCCAACGAGCCTGCTGCAG...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGAATGAGACCACTCTGTaGGCTGTCAAGCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWNETTL*AVKPWV
Trigger: CACCCAAGGCTTGACAGCCCACAGAGTGGTCTCATT...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTGGTCACGCACAGAATaGTCTGTCACTTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAWSRTE*SVTSPP
Trigger: AGGCGGTGAAGTGACAGATCATTCTGTGCGTGACCA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTCTTGTCCATCGGGATaGTCTTGGTCACGCACAGAA +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWSCPSG*SWSRTE
Trigger: TTCTGTGCGTGACCAAGATCATCCCGATGGACAAGA...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTTCCCATTGGCTGCACTaGCCGCCGCTCTCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFSHWLH*PPLSVF
Trigger: GAACACGGAGAGCGGCGGGCAGTGCAGCCAATGGGA...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR GCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAGCCACATGTGATTTTTaGATGTCCAGTATCACAGCC +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIATCDF*MSSITA
Trigger: GGCTGTGATACTGGACATGCAAAAATCACATGTGGC...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR GCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCAGAGACCCAGATGGCTaGCAGGGCCCACCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFRDPDG*QGPPFC
Trigger: ACAGAAGGGTGGGCCCTGGCAGCCATCTGGGTCTCT...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTCCCTTCAGGGTTTTCTaGGTGAGGGGACCAACCATT +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAPFRVF*VRGPTI
Trigger: AATGGTTGGTCCCCTCACCCAGAAAACCCTGAAGGG...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATGCTGCTGGGCTCATTaGTTCCTAAAATTTATCCTG +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRICCWAH*FLKFIL
Trigger: CAGGATAAATTTTAGGAATCAATGAGCCCAGCAGCA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAGCAGTGATTAATATGTaGCCCAGTATCACAGACAGT +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIAVINM*PSITDS
Trigger: ACTGTCTGTGATACTGGGTCACATATTAATCACTGC...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAAAATGCCTGTTGAGATaGAGGGAAATGCAACTGATC +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIKCLLR*REMQLI
Trigger: GATCAGTTGCATTTCCCTGCATCTCAACAGGCATTT...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR GCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGAGTGTTGACACCATCTaGATCTTGGCTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWSVDTI*ILALLF
Trigger: GAAGAGCAGAGCCAAGATGCAGATGGTGTCAACACT...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCCTCCTCCACAGCGTGTaGTGCTATCTTCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFLLHSV*CYLPEL
Trigger: GAGCTCGGGAAGATAGCAGCACACGCTGTGGAGGAG...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAAGAGACCCAGATGGCTaGCAGGGCCCACCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKRDPDG*QGPPFC
Trigger: ACAGAAGGGTGGGCCCTGGCAGCCATCTGGGTCTCT...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGCTGCAGCAGGCTCGTTaGGAAAGCCATAAATGCCTG +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKLQQAR*ESHKCL
Trigger: CAGGCATTTATGGCTTTCCCAACGAGCCTGCTGCAG...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGAGGTGTGTCCTCGCCTaGAGCTTTTTCACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWRCVLA*SFFTFF
Trigger: AAAGAAGGTGAAAAAGCTCCAGGCGAGGACACACCT...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATATTTTCTAGGTCACTaGAGCCTTCACTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIYFLGH*SLHFSQ
Trigger: CTGGGAAAAGTGAAGGCTCCAGTGACCTAGAAAATA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATTCTCATTAGCCACTTaGAACAAATTGTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIFSLAT*NKLCLG
Trigger: CCCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGCCCTTCAGGGTTTTCTaGGTGAGGGGACCAACCATT +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKPFRVF*VRGPTI
Trigger: AATGGTTGGTCCCCTCACCCAGAAAACCCTGAAGGG...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTGGGAAGTAGGCATCTaGCCTTATACTGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAWEVGI*PYTGSR
Trigger: CCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTAACCCGGGGAGGCTGTaGGAAGTAGGCATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFNPGRL*EVGIWP
Trigger: AGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGGGCCGGCTGCTCTATaGATACAGCCATCCACACCT +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKGPAAL*IQPSTP
Trigger: AGGTGTGGATGGCTGTATTCATAGAGCAGCCGGCCC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR TCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATGGACCGTTCTCATCTaGATCTTCTTTCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIWTVLI*IFFHFN
Trigger: GTTGAAATGAAAGAAGATTCAGATGAGAACGGTCCA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTACAAGGATAATGCCTaGAAGATGCGTCAACATGGG +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWYKDNA*KMRQHG
Trigger: CCCATGTTGACGCATCTTTCAGGCATTATCCTTGTA...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGTCAATCAAGCCACTGTaGCCCTGGGGCAAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKSIKPL*PWGKVV
Trigger: TACAACTTTGCCCCAGGGTCACAGTGGCTTGATTGA...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTCTGGTAGTCTCCATGTaGAGACCTCATGAACCAAGT +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTALVVSM*RPHEPS
Trigger: ACTTGGTTCATGAGGTCTTCACATGGAGACTACCAG...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGCTGAAAACAATGACATaGCTTTGGAACCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKLKTMT*LWNPGR
Trigger: CCTCCCCGGGTTCCAAAGTCATGTCATTGTTTTCAG...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAATTCAGGAGTCGGGCTaGAGATATTTATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIIQESG*RYLFLI
Trigger: AATGAGGAATAAATATCTTCAGCCCGACTCCTGAAT...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTATGCTGGGGTACATGTTaGCGTGGGGGTGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILCWGTC*RGGGWL
Trigger: AAGCCAGCCACCCCCACGGCAACATGTACCCCAGCA...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR GCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAACTCCACAGCGTGTGCTaGTATCTTCCCGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLTLLFFKAKPTCATYRELHSVC*YLPELP
Trigger: GGGGAGCTCGGGAAGATAGCAGCACACGCTGTGGAG...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGGCCCATTTTCTATCCTaGCTCCTCTGTCTGGGGATT +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKAHFLS*LLCLGI
Trigger: AATCCCCAGACAGAGGAGGCAGGATAGAAAATGGGC...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTGTTTGGGTCCTAAATaGACTGCCCCTTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWCLGPK*TAPFLS
Trigger: GCTAAGAAAAGGGGCAGTGCATTTAGGACCCAAACA...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGATACCACTGGCATCTTaGGTTTTTAGTACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWIPLAS*VFSTAA
Trigger: GGCAGCAGTACTAAAAACCCAAGATGCCAGTGGTAT...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGGGAGAATGCCAGGGCTaGATAATTTCCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKGECQG*IISILA
Trigger: AGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCC...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTAGAAGACACAGAAAATaGTCCGATCCACCTCATGGT +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTARRHRK*SDPPHG
Trigger: ACCATGAGGTGGATCGGATCATTTTCTGTGTCTTCT...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATATTCAACTGCCTCTTCTaGAGCAGGGCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIFNCLF*SRAGHS
Trigger: ACTGTGCCCGGCCCTGCTTCAGAAGAGGCAGTTGAA...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTGGTCACGCACAGAATaGTCTGTCACTTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFWSRTE*SVTSPP
Trigger: AGGCGGTGAAGTGACAGATCATTCTGTGCGTGACCA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGCTTGGCATAAACAAGTaGCAGCATTTAAACACAGGC +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWLGINK*QHLNTG
Trigger: GCCTGTGTTTAAATGCTGTCACTTGTTTATGCCAAG...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGGCAGTGATTAATATGTaGCCCAGTATCACAGACAGT +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWAVINM*PSITDS
Trigger: ACTGTCTGTGATACTGGGTCACATATTAATCACTGC...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGTTCATCTTGTGCCCCTaGATCAGGACCTGGAGTATT +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKFILCP*IRTWSI
Trigger: AATACTCCAGGTCCTGATGCAGGGGCACAAGATGAA...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR GCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTACTCCTCCACAGCGTGTaGTGCTATCTTCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILLLHSV*CYLPEL
Trigger: GAGCTCGGGAAGATAGCAGCACACGCTGTGGAGGAG...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAATGTTGCCGTGGGGGTaGCTGGCTTTAAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLMLPWG*LALSCK
Trigger: CTTGCAGCTTAAAGCCAGCCACCCCCACGGCAACAT...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR TCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGTTCAACTGCCTCTTCTaGAGCAGGGCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMFNCLF*SRAGHS
Trigger: ACTGTGCCCGGCCCTGCTTCAGAAGAGGCAGTTGAA...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTTCTGTTTCCATATATaGGCTCTGCGATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWFCFHI*ALRFCF
Trigger: GAAACAGAATCGCAGAGCTCATATATGGAAACAGAA...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTTGCTCTTTGGATACCTaGGGCCCAAAGGGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFCSLDT*GPKGSN
Trigger: ATTGGAGCCCTTTGGGCCTCAGGTATCCAAAGAGCA...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402914.5
CDS-3UTR GCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGTTGAGGGCAATGACTaGAGCAGGCTCGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKVEGND*SRLVGK
Trigger: TTTCCCAACGAGCCTGCTGCAGTCATTGCCCTCAAC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR GCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGTGTTTGGGTCCTAAATaGACTGCCCCTTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKCLGPK*TAPFLS
Trigger: GCTAAGAAAAGGGGCAGTGCATTTAGGACCCAAACA...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTTCTCATTAGCCACTTaGAACAAATTGTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAFSLAT*NKLCLG
Trigger: CCCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCAGGAAGAGACCCAGATaGCTGCCAGGGCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSRKRPR*LPGPTL
Trigger: AAGGGTGGGCCCTGGCAGCCATCTGGGTCTCTTCCT...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTGCCCACTATACCACTaGCATCTTGGGTTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTACPLYH*HLGFLV
Trigger: TACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTGCTTCCATATCAAACTaGAATAGCAACAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAASISN*NSNRRP
Trigger: TGGCCTTCTGTTGCTATTCCAGTTTGATATGGAAGC...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTATCAGCAGGGAAAAAGTaGAAGAGGCTCTGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILSAGKK*KRLCVL
Trigger: CAGGACGCAGAGCCTCTTTCACTTTTTCCCTGCTGA...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR TCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTACGATCCACCTCATGGTaGTTCTTGGCAAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILRSTSW*FLASHS
Trigger: GGAATGGCTTGCCAAGAATCACCATGAGGTGGATCG...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR TCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCGCCAGGATACACATGTaGGTGTTCAATCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFARIHM*VFNQAT
Trigger: AGTGGCTTGATTGAACACTCACATGTGTATCCTGGC...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGTGCTGCTGGGCTCATTaGTTCCTAAAATTTATCCTG +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKCCWAH*FLKFIL
Trigger: CAGGATAAATTTTAGGAATCAATGAGCCCAGCAGCA...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTATTCAGGAGTCGGGCTaGAGATATTTATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAIQESG*RYLFLI
Trigger: AATGAGGAATAAATATCTTCAGCCCGACTCCTGAAT...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGTCTATGCGACCTTCCTaGGTGTTGAGTTTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKSMRPS*VLSFQK
Trigger: TTTTTGGAAACTCAACACTCAGGAAGGTCGCATAGA...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402914.5
CDS-3UTR GCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCATAATGCCTGAAAGATaGGTCAACATGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFIMPER*VNMGPS
Trigger: GGAGGGACCCATGTTGACGCATCTTTCAGGCATTAT...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCGGTTTCCGAGGCTTTTaGCCATTTTCTATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFGFRGF*PFSILP
Trigger: AGGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACC...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGGTCGCCATCCCTTGTaGCCACTATACCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMGRHPL*PLYHWH
Trigger: ATGCCAGTGGTATAGTGGGCACAAGGGATGGCGACC...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGTCCTGTAACTCTTCATaGCACATAGCTGTATTGGAG +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKSCNSS*HIAVLE
Trigger: CTCCAATACAGCTATGTGGCATGAAGAGTTACAGGA...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATGGGAACCATTAATATaGCCCCTGGCTATTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKWEPLI*PLAIGP
Trigger: AGGGCCAATAGCCAGGGGCCATATTAATGGTTCCCA...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCAGGTGTGTCCTCGCCTaGAGCTTTTTCACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFRCVLA*SFFTFF
Trigger: AAAGAAGGTGAAAAAGCTCCAGGCGAGGACACACCT...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTCAGACCTTTTCCAAGTaGTTTCCGAGGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFQTFSK*FPRLLP
Trigger: GGGCAAAAGCCTCGGAAACCACTTGGAAAAGGTCTG...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTAGGAAGAGACCCAGATaGCTGCCAGGGCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLRKRPR*LPGPTL
Trigger: AAGGGTGGGCCCTGGCAGCCATCTGGGTCTCTTCCT...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTAACCCGGGGAGGCTGTaGGAAGTAGGCATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLNPGRL*EVGIWP
Trigger: AGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATCTTGTCCATCGGGATaGTCTTGGTCACGCACAGAA +
Preference number: 4 (lower is better)
Translates to: LLTLLFFKAKPTCATYRESCPSG*SWSRTE
Trigger: TTCTGTGCGTGACCAAGATCATCCCGATGGACAAGA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAGAGGCCTTGCGATGCTaGGGATTGTCATTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIEALRC*GLSFSS
Trigger: GGAACTAAATGACAATCCTCAGCATCGCAAGGCCTC...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATATCAATCAAGCCACTGTaGCCCTGGGGCAAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQISIKPL*PWGKVV
Trigger: TACAACTTTGCCCCAGGGTCACAGTGGCTTGATTGA...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTGCCAGGATACACATGTaGGTGTTCAATCAAGCCACT +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFARIHM*VFNQAT
Trigger: AGTGGCTTGATTGAACACTCACATGTGTATCCTGGC...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCGTGCCTTGGGAACCCTaGAGAAAATATTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFVPWEP*RKYFHL
Trigger: GAGGTGAAAATATTTTCTTCAGGGTTCCCAAGGCAC...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATATCAGGGTTTTCTGGGTaGGGGGACCAACCATTGAAT +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQISGFSG*GDQPLN
Trigger: ATTCAATGGTTGGTCCCCTCACCCAGAAAACCCTGA...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATCAGGGTTTTCTGGGTaGGGGGACCAACCATTGAAT +
Preference number: 4 (lower is better)
Translates to: LLTLLFFKAKPTCATYRESGFSG*GDQPLN
Trigger: ATTCAATGGTTGGTCCCCTCACCCAGAAAACCCTGA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTAGTTTGGTTGGAAATTaGCATCCAGAATTTATGTGC +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTASLVGN*HPEFMC
Trigger: GCACATAAATTCTGGATGTCAATTTCCAACCAAACT...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCGGTGAAGGCCTACTTTaGTCCTCTGTATGCAAACAT +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFGEGLL*SSVCKH
Trigger: ATGTTTGCATACAGAGGATCAAAGTAGGCCTTCACC...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGCCCTACAGTATGGATaGCATCTGCATAAACTGGCT +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKALQYG*HLHKLA
Trigger: AGCCAGTTTATGCAGATGTCATCCATACTGTAGGGC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402914.5
CDS-3UTR GCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTAGTGTTGACACCATCTaGATCTTGGCTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFSVDTI*ILALLF
Trigger: GAAGAGCAGAGCCAAGATGCAGATGGTGTCAACACT...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGGAATCACTTCTGGTTaGTCCACAATCACGGCATCT +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKGITSG*STITAS
Trigger: AGATGCCGTGATTGTGGAGCAACCAGAAGTGATTCC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAGCCCATTTTCTATCCTaGCTCCTCTGTCTGGGGATT +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIAHFLS*LLCLGI
Trigger: AATCCCCAGACAGAGGAGGCAGGATAGAAAATGGGC...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTATGGGCTGTCAAGCCTTaGGTGAAGACAGGATATTCT +
Preference number: 4 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLWAVKP*VKTGYS
Trigger: AGAATATCCTGTCTTCACCCAAGGCTTGACAGCCCA...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTAGTAGCACTAACATTTaGGAGTCACAAGAAAAACGA +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTASSTNI*ESQEKR
Trigger: TCGTTTTTCTTGTGACTCCCAAATGTTAGTGCTACT...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAGGAGAATGCCAGGGCTaGATAATTTCCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILGECQG*IISILA
Trigger: AGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCC...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGACATCTGCATAAACTaGCTCTATGCGACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKDICIN*LYATFL
Trigger: CAGGAAGGTCGCATAGAGCCAGTTTATGCAGATGTC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402914.5
3UTR CAA 72 bp CTCCTCTGTCTGGGGATTATACTGCTGCTGGGCTCATaGATTCCTAAAATTTATCCTGCAGCTTATCAAACC +
Preference number: 4 (lower is better)
Translates to: LLCLGIILLLGS*IPKIYPAAYQT
Trigger: GGTTTGATAAGCTGCAGGATAAATTTTAGGAATCAATGAGCCCAGCAGCAGTATAATCCCCAGACAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTCTACCTCTAGCAATGTaGTGTCACCTCTATAGAGAG +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFLPLAM*CHLYRE
Trigger: CTCTCTATAGAGGTGACATCACATTGCTAGAGGTAG...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR TCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCCGATCCACCTCATGGTaGTTCTTGGCAAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSRSTSW*FLASHS
Trigger: GGAATGGCTTGCCAAGAATCACCATGAGGTGGATCG...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR TCA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAGAAGACACAGAAAATaGTCCGATCCACCTCATGGT +
Preference number: 4 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLRRHRK*SDPPHG
Trigger: ACCATGAGGTGGATCGGATCATTTTCTGTGTCTTCT...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR TCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTGGTCACGCACAGAATaGTCTGTCACTTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSWSRTE*SVTSPP
Trigger: AGGCGGTGAAGTGACAGATCATTCTGTGCGTGACCA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATTCCTCCCCTTCCTTTaGATAAACCACTGTGTGACC +
Preference number: 4 (lower is better)
Translates to: LLTLLFFKAKPTCATYREFLPFL*INHCVT
Trigger: GGTCACACAGTGGTTTATTCAAAGGAAGGGGAGGAA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTGCTGCTGGGCTCATTaGTTCCTAAAATTTATCCTG +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFCCWAH*FLKFIL
Trigger: CAGGATAAATTTTAGGAATCAATGAGCCCAGCAGCA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGCATAATCCCACATTATaGGGTCACGTAAATGTCATT +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKHNPTL*GHVNVI
Trigger: AATGACATTTACGTGACCTCATAATGTGGGATTATG...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGAATACTTCACAAGAATaGCGGCAACTTTCAATTGAG +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKNTSQE*RQLSIE
Trigger: CTCAATTGAAAGTTGCCGTCATTCTTGTGAAGTATT...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAGGTGAAGGCCTACTTTaGTCCTCTGTATGCAAACAT +
Preference number: 4 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLGEGLL*SSVCKH
Trigger: ATGTTTGCATACAGAGGATCAAAGTAGGCCTTCACC...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGCATCATTTTGGCCCTTaGCCTTCATCTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMHHFGP*PSSPPS
Trigger: GGAAGGAGGAGATGAAGGGCAAGGGCCAAAATGATG...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR GCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCCAAACAGGGGCCGGCTaGTCTATGAATACAGCCATC +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSQTGAG*SMNTAI
Trigger: GATGGCTGTATTCATAGAGCAGCCGGCCCCTGTTTG...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR GCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAGGAATCACTTCTGGTTaGTCCACAATCACGGCATCT +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIGITSG*STITAS
Trigger: AGATGCCGTGATTGTGGAGCAACCAGAAGTGATTCC...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAGGTTTCCGAGGCTTTTaGCCATTTTCTATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLTLLFFKAKPTCATYREGFRGF*PFSILP
Trigger: AGGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACC...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATATCATTGTACAGCCTGTaGAATGGCAGCACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQISLYSL*NGSTSK
Trigger: TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGA...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTTCTCATTAGCCACTTaGAACAAATTGTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFFSLAT*NKLCLG
Trigger: CCCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCAATGAGACCACTCTGTaGGCTGTCAAGCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSNETTL*AVKPWV
Trigger: CACCCAAGGCTTGACAGCCCACAGAGTGGTCTCATT...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTGTATTGGAGTTTGGTTaGAAATTGACATCCAGAATT +
Preference number: 4 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAVLEFG*KLTSRI
Trigger: AATTCTGGATGTCAATTTCCAACCAAACTCCAATAC...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAGGTCATAGCCACATGTaGTTTTTGCATGTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLGHSHM*FLHVQY
Trigger: ATACTGGACATGCAAAAATCACATGTGGCTATGACC...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR TCA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTTCTGTTTCCATATATaGGCTCTGCGATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFFCFHI*ALRFCF
Trigger: GAAACAGAATCGCAGAGCTCATATATGGAAACAGAA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTTCAATCAAGCCACTGTaGCCCTGGGGCAAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LLFFKAKPTCATYREMSFSIKPL*PWGKVV
Trigger: TACAACTTTGCCCCAGGGTCACAGTGGCTTGATTGA...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAGTGCCTTGGGAACCCTaGAGAAAATATTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILVPWEP*RKYFHL
Trigger: GAGGTGAAAATATTTTCTTCAGGGTTCCCAAGGCAC...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATATCCTGTAATTTCAAATaGGACCACTCTGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQISCNFK*DHSVGC
Trigger: ACAGCCCACAGAGTGGTCTCATTTGAAATTACAGGA...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAACCATTGAATCAGCCTTaGACTTGGCATAAACAAGTG +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKPLNQP*TWHKQV
Trigger: CACTTGTTTATGCCAAGTTCAAGGCTGATTCAATGG...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCCTGAAAACAATGACATaGCTTTGGAACCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSLKTMT*LWNPGR
Trigger: CCTCCCCGGGTTCCAAAGTCATGTCATTGTTTTCAG...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAGGTGAAGGCCTACTTTaGTCCTCTGTATGCAAACAT +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIGEGLL*SSVCKH
Trigger: ATGTTTGCATACAGAGGATCAAAGTAGGCCTTCACC...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTACAGTATCACAGACAGTaGTTCGGATGCCTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILQYHRQ*FGCLLC
Trigger: ACAAAGAAGGCATCCGAATCACTGTCTGTGATACTG...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATACAGTATCACAGACAGTaGTTCGGATGCCTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIQYHRQ*FGCLLC
Trigger: ACAAAGAAGGCATCCGAATCACTGTCTGTGATACTG...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGCAGTGATTAATATGTaGCCCAGTATCACAGACAGT +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKAVINM*PSITDS
Trigger: ACTGTCTGTGATACTGGGTCACATATTAATCACTGC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAACCTTTTTCTTCTTGTTaGTGGGGTACATGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LLTLLFFKAKPTCATYREPFSSC*WGTCCR
Trigger: ACGGCAACATGTACCCCAGCAACAAGAAGAAAAAGG...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR GCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTGTTGAGGGCAATGACTaGAGCAGGCTCGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLVEGND*SRLVGK
Trigger: TTTCCCAACGAGCCTGCTGCAGTCATTGCCCTCAAC...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR GCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTACTTGGAACAAATTGTaGCTTGGGAACCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFTWNKL*LGNPEE
Trigger: TTCTTCAGGGTTCCCAAGGCACAATTTGTTCCAAGT...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAACTTGGAACAAATTGTaGCTTGGGAACCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKTWNKL*LGNPEE
Trigger: TTCTTCAGGGTTCCCAAGGCACAATTTGTTCCAAGT...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTATCCTGTAACTCTTCATaGCACATAGCTGTATTGGAG +
Preference number: 4 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLSCNSS*HIAVLE
Trigger: CTCCAATACAGCTATGTGGCATGAAGAGTTACAGGA...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTGGGAACCATTAATATaGCCCCTGGCTATTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSWEPLI*PLAIGP
Trigger: AGGGCCAATAGCCAGGGGCCATATTAATGGTTCCCA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAAGGTCTTCCTTGTaGGAACCATTAATATGGCCC +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMARSSL*EPLIWP
Trigger: GGGCCATATTAATGGTTCCCACAAGGAAGACCTTGC...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CCA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTATATTTTCTAGGTCACTaGAGCCTTCACTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLYFLGH*SLHFSQ
Trigger: CTGGGAAAAGTGAAGGCTCCAGTGACCTAGAAAATA...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTCAGACCTTTTCCAAGTaGTTTCCGAGGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LLFFKAKPTCATYREMSFQTFSK*FPRLLP
Trigger: GGGCAAAAGCCTCGGAAACCACTTGGAAAAGGTCTG...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTATGCACCTGCCACCATaGTTAGGAAGGAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLMHLPP*LGRKRP
Trigger: GGGTCTCTTCCTTCCTAACCATGGTGGCAGGTGCAT...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAATGCACCTGCCACCATaGTTAGGAAGGAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSMHLPP*LGRKRP
Trigger: GGGTCTCTTCCTTCCTAACCATGGTGGCAGGTGCAT...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGTGGGCTGTCAAGCCTTaGGTGAAGACAGGATATTCT +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMWAVKP*VKTGYS
Trigger: AGAATATCCTGTCTTCACCCAAGGCTTGACAGCCCA...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAAATGAGACCACTCTGTaGGCTGTCAAGCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSNETTL*AVKPWV
Trigger: CACCCAAGGCTTGACAGCCCACAGAGTGGTCTCATT...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCACCCTTCAGGGTTTTCTaGGTGAGGGGACCAACCATT +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSPFRVF*VRGPTI
Trigger: AATGGTTGGTCCCCTCACCCAGAAAACCCTGAAGGG...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAATACCACTGGCATCTTaGGTTTTTAGTACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILIPLAS*VFSTAA
Trigger: GGCAGCAGTACTAAAAACCCAAGATGCCAGTGGTAT...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTGGGAAGTAGGCATCTaGCCTTATACTGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSWEVGI*PYTGSR
Trigger: CCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGCTTCCATATCAAACTaGAATAGCAACAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKASISN*NSNRRP
Trigger: TGGCCTTCTGTTGCTATTCCAGTTTGATATGGAAGC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTGCTTCCATATCAAACTaGAATAGCAACAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFASISN*NSNRRP
Trigger: TGGCCTTCTGTTGCTATTCCAGTTTGATATGGAAGC...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGGTATTGGAGTTTGGTTaGAAATTGACATCCAGAATT +
Preference number: 4 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKVLEFG*KLTSRI
Trigger: AATTCTGGATGTCAATTTCCAACCAAACTCCAATAC...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAACACGAGCTTCAGAGATaGTTTATAGCAATTTGCAAG +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKHELQR*FIAICK
Trigger: CTTGCAAATTGCTATAAATCATCTCTGAAGCTCGTG...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR TCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTGCAGGGAAATGCAACTaGTCGGATGTTATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFAGKCN*SDVIFF
Trigger: AAAGAAAATAACATCCGATCAGTTGCATTTCCCTGC...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR TCA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTATGGACCGTTCTCATCTaGATCTTCTTTCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLWTVLI*IFFHFN
Trigger: GTTGAAATGAAAGAAGATTCAGATGAGAACGGTCCA...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATCTTGTCCATCGGGATaGTCTTGGTCACGCACAGAA +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSSCPSG*SWSRTE
Trigger: TTCTGTGCGTGACCAAGATCATCCCGATGGACAAGA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAGAGGCCTTGCGATGCTaGGGATTGTCATTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSEALRC*GLSFSS
Trigger: GGAACTAAATGACAATCCTCAGCATCGCAAGGCCTC...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATACTTGGCATAAACAAGTaGCAGCATTTAAACACAGGC +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQILGINK*QHLNTG
Trigger: GCCTGTGTTTAAATGCTGTCACTTGTTTATGCCAAG...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTTCAGGGTTTTCTGGGTaGGGGGACCAACCATTGAAT +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLSGFSG*GDQPLN
Trigger: ATTCAATGGTTGGTCCCCTCACCCAGAAAACCCTGA...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAAAATGCCTGTTGAGATaGAGGGAAATGCAACTGATC +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILKCLLR*REMQLI
Trigger: GATCAGTTGCATTTCCCTGCATCTCAACAGGCATTT...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR GCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCAGTGTTGACACCATCTaGATCTTGGCTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSSVDTI*ILALLF
Trigger: GAAGAGCAGAGCCAAGATGCAGATGGTGTCAACACT...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTATCCTGTAACTCTTCATaGCACATAGCTGTATTGGAG +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILSCNSS*HIAVLE
Trigger: CTCCAATACAGCTATGTGGCATGAAGAGTTACAGGA...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTTTTCTTCTTGTTGCTaGGGTACATGTTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSFSSCC*GTCCRG
Trigger: CCCACGGCAACATGTACCCCAGCAACAAGAAGAAAA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATGGGAAGTAGGCATCTaGCCTTATACTGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSWEVGI*PYTGSR
Trigger: CCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAGGAGAATGCCAGGGCTaGATAATTTCCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSGECQG*IISILA
Trigger: AGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCC...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTATTCTGTTTCCATATATaGGCTCTGCGATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: EAVQHLNAGLTKEARIILFCFHI*ALRFCF
Trigger: GAAACAGAATCGCAGAGCTCATATATGGAAACAGAA...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCACTGGTAGTCTCCATGTaGAGACCTCATGAACCAAGT +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSLVVSM*RPHEPS
Trigger: ACTTGGTTCATGAGGTCTTCACATGGAGACTACCAG...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTCCTGTAATTTCAAATaGGACCACTCTGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSSCNFK*DHSVGC
Trigger: ACAGCCCACAGAGTGGTCTCATTTGAAATTACAGGA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAACTCTTAGGTATTCTTTaGGTCTCTCTTCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLTLLFFKAKPTCATYRELLGIL*VSLLRS
Trigger: TGACCTTAGAAGAGAGACGCAAAGAATACCTAAGAG...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR GCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTATAATGCCTGAAAGATaGGTCAACATGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLIMPER*VNMGPS
Trigger: GGAGGGACCCATGTTGACGCATCTTTCAGGCATTAT...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTGGTTTCCGAGGCTTTTaGCCATTTTCTATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLGFRGF*PFSILP
Trigger: AGGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACC...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGCATCCTTTACAGTTATaGAGCAGAGAGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMHPLQL*SRESPL
Trigger: AAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATG...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATCATTGTACAGCCTGTaGAATGGCAGCACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSSLYSL*NGSTSK
Trigger: TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATAATTGGCCCTACAGTATaGATGACATATTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIIGPTV*MTYFAG
Trigger: TCCTGCAAAATATGTCATCCATACTGTAGGGCCAAT...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAGCAAGGTCTTCCTTGTaGGAACCATTAATATGGCCC +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSARSSL*EPLIWP
Trigger: GGGCCATATTAATGGTTCCCACAAGGAAGACCTTGC...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTATCACGGCATCTTCTTaGTTTGATGAAAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFITASS*FDESSS
Trigger: AGAAGAACTTTCATCAAACCAAGAAGATGCCGTGAT...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGTGCCCACTATACCACTaGCATCTTGGGTTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMCPLYH*HLGFLV
Trigger: TACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCA...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATTGTTGACTCTCTGTTaGGTCATTTACCTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LLTLLFFKAKPTCATYRELLTLC*VIYLVN
Trigger: GTTGACAAGGTAAATGACCCAACAGAGAGTCAACAA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGGGAAATGCAACTaGTCGGATGTTATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMAGKCN*SDVIFF
Trigger: AAAGAAAATAACATCCGATCAGTTGCATTTCCCTGC...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR TCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATACAAGGATAATGCCTaGAAGATGCGTCAACATGGG +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSYKDNA*KMRQHG
Trigger: CCCATGTTGACGCATCTTTCAGGCATTATCCTTGTA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTTACAAGGATAATGCCTaGAAGATGCGTCAACATGGG +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLYKDNA*KMRQHG
Trigger: CCCATGTTGACGCATCTTTCAGGCATTATCCTTGTA...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTGTGCCTTGGGAACCCTaGAGAAAATATTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLVPWEP*RKYFHL
Trigger: GAGGTGAAAATATTTTCTTCAGGGTTCCCAAGGCAC...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTCATCCTTTACAGTTATaGAGCAGAGAGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: LLFFKAKPTCATYREMSFHPLQL*SRESPL
Trigger: AAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATG...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTTGTTTGGGTCCTAAATaGACTGCCCCTTTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLCLGPK*TAPFLS
Trigger: GCTAAGAAAAGGGGCAGTGCATTTAGGACCCAAACA...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTGCCCACTATACCACTaGCATCTTGGGTTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSCPLYH*HLGFLV
Trigger: TACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAGAAACTGTCAATATTTaGATGACATCGTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKETVNI*MTSFLG
Trigger: TCCAAGAAACGATGTCATCCAAATATTGACAGTTTC...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTGTATTGGAGTTTGGTTaGAAATTGACATCCAGAATT +
Preference number: 4 (lower is better)
Translates to: MPERCVNMGPSTKLKETFVLEFG*KLTSRI
Trigger: AATTCTGGATGTCAATTTCCAACCAAACTCCAATAC...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGAGCTGTATTGGAGTTTaGTTGGAAATTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMSCIGV*LEIDIQ
Trigger: CTGGATGTCAATTTCCAACCAAACTCCAATACAGCT...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTGGACCGTTCTCATCTaGATCTTCTTTCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSWTVLI*IFFHFN
Trigger: GTTGAAATGAAAGAAGATTCAGATGAGAACGGTCCA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGAATACTTCACAAGAATaGCGGCAACTTTCAATTGAG +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMNTSQE*RQLSIE
Trigger: CTCAATTGAAAGTTGCCGTCATTCTTGTGAAGTATT...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR GCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCCCTTCCATGATAGAATaGTGTTCAGGGGAATATAGT +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSPSMIE*CSGEYS
Trigger: ACTATATTCCCCTGAACAGCATTCTATCATGGAAGG...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR GCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTATGGATGACATATTTTaGAGGAAGGTCATAGCCACA +
Preference number: 4 (lower is better)
Translates to: LLFFKAKPTCATYREMSFMDDIF*RKVIAT
Trigger: TGTGGCTATGACCTTCCTGCAAAATATGTCATCCAT...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATATTTTCTAGGTCACTaGAGCCTTCACTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSYFLGH*SLHFSQ
Trigger: CTGGGAAAAGTGAAGGCTCCAGTGACCTAGAAAATA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCAGCTGTATTGGAGTTTaGTTGGAAATTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSSCIGV*LEIDIQ
Trigger: CTGGATGTCAATTTCCAACCAAACTCCAATACAGCT...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTCATAATCCCACATTATaGGGTCACGTAAATGTCATT +
Preference number: 4 (lower is better)
Translates to: LLFFKAKPTCATYREMSFHNPTL*GHVNVI
Trigger: AATGACATTTACGTGACCTCATAATGTGGGATTATG...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTATTCAGGAGTCGGGCTaGAGATATTTATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLIQESG*RYLFLI
Trigger: AATGAGGAATAAATATCTTCAGCCCGACTCCTGAAT...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTAGTTTGGTTGGAAATTaGCATCCAGAATTTATGTGC +
Preference number: 4 (lower is better)
Translates to: LLFFKAKPTCATYREMSFSLVGN*HPEFMC
Trigger: GCACATAAATTCTGGATGTCAATTTCCAACCAAACT...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCATCACGGCATCTTCTTaGTTTGATGAAAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSITASS*FDESSS
Trigger: AGAAGAACTTTCATCAAACCAAGAAGATGCCGTGAT...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGAAACTGTCAATATTTaGATGACATCGTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: AGKSISFSNLFHCTACAMETVNI*MTSFLG
Trigger: TCCAAGAAACGATGTCATCCAAATATTGACAGTTTC...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTTTGTTGACTCTCTGTTaGGTCATTTACCTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: ITFILLEFLGRENSLLPLLLTLC*VIYLVN
Trigger: GTTGACAAGGTAAATGACCCAACAGAGAGTCAACAA...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378058.7
ENST00000402914.5
CDS-3UTR TCA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCACATAATCCCACATTATaGGGTCACGTAAATGTCATT +
Preference number: 4 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSHNPTL*GHVNVI
Trigger: AATGACATTTACGTGACCTCATAATGTGGGATTATG...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CCA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTGAAACTGTCAATATTTaGATGACATCGTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LLFFKAKPTCATYREMSFETVNI*MTSFLG
Trigger: TCCAAGAAACGATGTCATCCAAATATTGACAGTTTC...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGCAGCGCCGCCTCCCATaGGCTGCACTGCCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKQRRLP*AALPAA
Trigger: AGCGGCGGGCAGTGCAGCCAATGGGAGGCGGCGCTG...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS GCA 90 bp CTCAGCAGCTTGGAGCAGAAGAGAGGATGGCTGTGGCAGGCTTGGTaGATGGTGTTAAAGCTGGCTGTGGAGCATCCTTTTTCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: LSSLEQKRGWLWQAW*MVLKLAVEHPFSVC
Trigger: GCAGACTGAAAAAGGATGCTCCACAGCCAGCTTTAACACCATGCACCAAGCCTGCCACAGCCATCCTCTCTTCTGCTCCAAGCTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS GCA 90 bp GATCTGAAGCAGCATGCCAGCTCTCCTGGGGACTGGCAAGCTGAATaGAGTGCAGACAAACCCTGCAAGCCTCAAAACTCAGAACCTCCA +
Preference number: 5 (lower is better)
Translates to: DLKQHASSPGDWQAE*SADKPCKPQNSEPP
Trigger: TGGAGGTTCTGAGTTTTGAGGCTTGCAGGGTTTGTCTGCACTGCATTCAGCTTGCCAGTCCCCAGGAGAGCTGGCATGCTGCTTCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS CCA 90 bp CATTTCCTGTCTCTCAGCAGCTTGGAGCAGAAGAGAGGATGGCTGTaGCAGGCTTGGTGCATGGTGTTAAAGCTGGCTGTGGAGCATCCT +
Preference number: 5 (lower is better)
Translates to: HFLSLSSLEQKRGWL*QAWCMVLKLAVEHP
Trigger: AGGATGCTCCACAGCCAGCTTTAACACCATGCACCAAGCCTGCCACAGCCATCCTCTCTTCTGCTCCAAGCTGCTGAGAGACAGGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAGGCACAGTGACAGTGTaGACACCATCTGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIGTVTV*TPSASW
Trigger: CCAAGATGCAGATGGTGTCAACACTGTCACTGTGCC...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAAACAATGACATGACTTaGGAACCCGGGGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRINNDMT*EPGEAV
Trigger: CACAGCCTCCCCGGGTTCCAAAGTCATGTCATTGTT...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS GCA 90 bp AGCTCTCCTGGGGACTGGCAAGCTGAATGCAGTGCAGACAAACCCTaGAAGCCTCAAAACTCAGAACCTCCATTTCCTGTCTCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: SSPGDWQAECSADKP*KPQNSEPPFPVSQQ
Trigger: CTGCTGAGAGACAGGAAATGGAGGTTCTGAGTTTTGAGGCTTGCAGGGTTTGTCTGCACTGCATTCAGCTTGCCAGTCCCCAGGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS CCA 90 bp TCTCTCAGCAGCTTGGAGCAGAAGAGAGGATGGCTGTGGCAGGCTTaGTGCATGGTGTTAAAGCTGGCTGTGGAGCATCCTTTTTCAGTC +
Preference number: 5 (lower is better)
Translates to: SLSSLEQKRGWLWQA*CMVLKLAVEHPFSV
Trigger: GACTGAAAAAGGATGCTCCACAGCCAGCTTTAACACCATGCACCAAGCCTGCCACAGCCATCCTCTCTTCTGCTCCAAGCTGCTGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATGGTTTCCGAGGCTTTaGCCCATTTTCTATCCTGCC +
Preference number: 5 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIWFPRL*PIFYPA
Trigger: GGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACCA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTAGAGGAAAAGCCCCTTaGTCTCTCCTACAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: SPSLVPTIPLASWVFSTARGKAP*SLLQRG
Trigger: TCCTCGCTGTAGGAGAGACAAAGGGGCTTTTCCTCT...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS GCA 90 bp ATTGTGCATTTGGGGAGCTCGGATTTTAAGGCAGTAGCTTGCCGATaGTCCCAGCTGAATAAAGCCCTTCCTTCTACAACTCGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: IVHLGSSDFKAVACR*SQLNKALPSTTRCL
Trigger: CAGACACCGAGTTGTAGAAGGAAGGGCTTTATTCAGCTGGGAGCATCGGCAAGCTACTGCCTTAAAATCCGAGCTCCCCAAATGCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407045.3
CDS-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATTGCTGGGGTACATGTaGCCGTGGGGGTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLTLLFFKAKPTCATYRELLGYM*PWGWLA
Trigger: AGCCAGCCACCCCCACGGCAACATGTACCCCAGCAA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CAA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGGGCACAGTGACAGTGTaGACACCATCTGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKGTVTV*TPSASW
Trigger: CCAAGATGCAGATGGTGTCAACACTGTCACTGTGCC...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTGGAATCACTTCTGGTaGCTCCACAATCACGGCATC +
Preference number: 5 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAWNHFW*LHNHGI
Trigger: GATGCCGTGATTGTGGAGCAACCAGAAGTGATTCCA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATACTGCTGCTGGGCTCATaGATTCCTAAAATTTATCCT +
Preference number: 5 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRILLLGS*IPKIYP
Trigger: AGGATAAATTTTAGGAATCAATGAGCCCAGCAGCAG...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTGGTTTCCGAGGCTTTaGCCCATTTTCTATCCTGCC +
Preference number: 5 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAWFPRL*PIFYPA
Trigger: GGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACCA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAGGAACAAATTGTGCCTaGGGAACCCTGAAGAAAATA +
Preference number: 5 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIGTNCA*GTLKKI
Trigger: TATTTTCTTCAGGGTTCCCAAGGCACAATTTGTTCC...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGGTGGGCTGTCAAGCCTaGGGTGAAGACAGGATATTC +
Preference number: 5 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKVGCQA*GEDRIF
Trigger: GAATATCCTGTCTTCACCCAAGGCTTGACAGCCCAC...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATGCCACATAGCTGTATaGGAGTTTGGTTGGAAATTG +
Preference number: 5 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRICHIAV*EFGWKL
Trigger: CAATTTCCAACCAAACTCCAATACAGCTATGTGGCA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS GCA 90 bp ACAGAAATTGTGCATTTGGGGAGCTCGGATTTTAAGGCAGTAGCTTaGCGATGCTCCCAGCTGAATAAAGCCCTTCCTTCTACAACTCGG +
Preference number: 5 (lower is better)
Translates to: TEIVHLGSSDFKAVA*RCSQLNKALPSTTR
Trigger: CCGAGTTGTAGAAGGAAGGGCTTTATTCAGCTGGGAGCATCGGCAAGCTACTGCCTTAAAATCCGAGCTCCCCAAATGCACAATTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407045.3
CDS CCA 90 bp TGCAAGGTCTTCCTTGTGGGAACCATTAATATGGCCCCTGGCTATTaGCCCTACAGTATGGATGACATCTGCATAAACTGGCTCTATGCG +
Preference number: 5 (lower is better)
Translates to: CKVFLVGTINMAPGY*PYSMDDICINWLYA
Trigger: CGCATAGAGCCAGTTTATGCAGATGTCATCCATACTGTAGGGCCAATAGCCAGGGGCCATATTAATGGTTCCCACAAGGAAGACCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402914.5
CDS-3UTR CAA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTCATTCCTTAATGGTGTaGAGGGCAATGACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAHSLMV*RAMTAA
Trigger: TGCTGCAGTCATTGCCCTCAACACCATTAAGGAATG...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTTCCTTCGCTTCATCTaGTGCCCCTGCATCAGGACC +
Preference number: 5 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFFLRFI*CPCIRT
Trigger: GGTCCTGATGCAGGGGCACAAGATGAAGCGAAGGAA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS TCA 90 bp ATCCTTTGCAAAATCTTCATCTTTACAGTCTTCAACTGCCTCTTCTaGAGCAGGGCCGGGCACAGTGACAGTGTTGACACCATCTGCATC +
Preference number: 5 (lower is better)
Translates to: ILCKIFIFTVFNCLF*SRAGHSDSVDTICI
Trigger: GATGCAGATGGTGTCAACACTGTCACTGTGCCCGGCCCTGCTTCAGAAGAGGCAGTTGAAGACTGTAAAGATGAAGATTTTGCAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
ENST00000642719.1
ENST00000684519.1
CDS TCA 90 bp ATCCTTTGCAAAATCTTCATCTTTACAGTCTTCAACTGCCTCTTCTaGAGCAGGGCCGGGCACAGTGACAGTGTTGACACCATCTCTGCA +
Preference number: 5 (lower is better)
Translates to: ILCKIFIFTVFNCLF*SRAGHSDSVDTISA
Trigger: TGCAGAGATGGTGTCAACACTGTCACTGTGCCCGGCCCTGCTTCAGAAGAGGCAGTTGAAGACTGTAAAGATGAAGATTTTGCAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486914.1
CDS TCA 90 bp TTCCAACCTACAGGCAAGGCAGTTGGACTTTCGTATGTTACATCATaGGTAATTGCTGGCAGGCCATCCTCAGGGAGAGGCCATAATCTT +
Preference number: 5 (lower is better)
Translates to: FQPTGKAVGLSYVTS*VIAGRPSSGRGHNL
Trigger: AAGATTATGGCCTCTCCCTGAGGATGGCCTGCCAGCAATTACTCATGATGTAACATACGAAAGTCCAACTGCCTTGCCTGTAGGTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494602.5
CDS CCA 90 bp TGCAAGGTCTTCCTTGTGGGAACCATTAATATGGCCCCTGGCTATTaGCCCTACAGTATGGATGACATATTTTGCAGGAAGGTCATAGCC +
Preference number: 5 (lower is better)
Translates to: CKVFLVGTINMAPGY*PYSMDDIFCRKVIA
Trigger: GGCTATGACCTTCCTGCAAAATATGTCATCCATACTGTAGGGCCAATAGCCAGGGGCCATATTAATGGTTCCCACAAGGAAGACCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000642719.1
ENST00000684519.1
CDS-3UTR CAA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTCTCTTAGGTATTCTTaGCGTCTCTCTTCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWSLRYS*RLSSKV
Trigger: GACCTTAGAAGAGAGACGCAAAGAATACCTAAGAGA...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATTTCAGGAGGAGCTTTaGATATTCATAGGCATATGT +
Preference number: 5 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIFQEEL*IFIGIC
Trigger: ACATATGCCTATGAATATCAAAAGCTCCTCCTGAAA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCGTGGGCTGTCAAGCCTaGGGTGAAGACAGGATATTC +
Preference number: 5 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFVGCQA*GEDRIF
Trigger: GAATATCCTGTCTTCACCCAAGGCTTGACAGCCCAC...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATAAGGTCTCTTCCATCATaGTTCATTAGAAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRIRSLPS*FIRKSL
Trigger: CAGAGATTTTCTAATGAACAATGATGGAAGAGACCT...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AACCCGGGGAGGCTGTGGGAAGTAGGCATCTGGCCTTATACTGGCTCTAGGATATGTATTGGAGTTTGGTaGGAAATTGACATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: NPGRLWEVGIWPYTGSRICIGVW*EIDIQN
Trigger: ATTCTGGATGTCAATTTCCAACCAAACTCCAATACA...TATCCTAGAGCCAGTATAAGGCCAGATGCCTACTTCCCACAGCCTCCCCGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTCCATCGGGATGATCTaGGTCACGCACAGAATGATC +
Preference number: 5 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFSIGMI*VTHRMI
Trigger: GATCATTCTGTGCGTGACCAAGATCATCCCGATGGA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTGGAATCACTTCTGGTaGCTCCACAATCACGGCATC +
Preference number: 5 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFWNHFW*LHNHGI
Trigger: GATGCCGTGATTGTGGAGCAACCAGAAGTGATTCCA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGCATGGTCGCCATCCCTaGTGCCCACTATACCACTGG +
Preference number: 5 (lower is better)
Translates to: AGKSISFSNLFHCTACAMHGRHP*CPLYHW
Trigger: CCAGTGGTATAGTGGGCACAAGGGATGGCGACCATG...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTGCCACATAGCTGTATaGGAGTTTGGTTGGAAATTG +
Preference number: 5 (lower is better)
Translates to: SPSLVPTIPLASWVFSTACHIAV*EFGWKL
Trigger: CAATTTCCAACCAAACTCCAATACAGCTATGTGGCA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS CCA 90 bp TGGCCATGTAGTTACAACAGAGGGGCATCACTAGCTCTTGCTGTCTaGGTCAGTCATGTAAACGTGGTAAAATTTCTACAGGCAAATGAC +
Preference number: 5 (lower is better)
Translates to: WPCSYNRGASLALAV*VSHVNVVKFLQAND
Trigger: GTCATTTGCCTGTAGAAATTTTACCACGTTTACATGACTGACCCAGACAGCAAGAGCTAGTGATGCCCCTCTGTTGTAACTACATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS-3UTR CAA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTGACACCATCTGCATCTaGGCTCTGCTCTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: MPERCVNMGPSTKLKETFDTICI*ALLFHF
Trigger: GAAATGGAAGAGCAGAGCCAAGATGCAGATGGTGTC...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAGGCACAGTGACAGTGTaGACACCATCTGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: LLTLLFFKAKPTCATYREGTVTV*TPSASW
Trigger: CCAAGATGCAGATGGTGTCAACACTGTCACTGTGCC...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTATGGAATCACTTCTGGTaGCTCCACAATCACGGCATC +
Preference number: 5 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLWNHFW*LHNHGI
Trigger: GATGCCGTGATTGTGGAGCAACCAGAAGTGATTCCA...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGAATATTTTCACCTCATaGTCCAGACCTTTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWNIFTS*SRPFPS
Trigger: ACTTGGAAAAGGTCTGGACAATGAGGTGAAAATATT...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCCATGGTCGCCATCCCTaGTGCCCACTATACCACTGG +
Preference number: 5 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSHGRHP*CPLYHW
Trigger: CCAGTGGTATAGTGGGCACAAGGGATGGCGACCATG...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CCTAGCAAAGGGCCATCCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTCTAGCAGATTGCACTaGTCAAATACTTCACAAGAA +
Preference number: 5 (lower is better)
Translates to: PSKGPSFTVMQQRVTSCWSSRLH*SNTSQE
Trigger: TTCTTGTGAAGTATTTGACAAGTGCAATCTGCTAGA...CCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGGATGGCCCTTTGCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS TCA 90 bp TGCTCAAATCAATCACGACCCTTTCATGTGAAATCTTTAGTGCTGTaGGCCCTTAAAAGGGACAGAAATTGTGCATTTGGGGAGCTCGGA +
Preference number: 5 (lower is better)
Translates to: CSNQSRPFHVKSLVL*ALKRDRNCAFGELG
Trigger: TCCGAGCTCCCCAAATGCACAATTTCTGTCCCTTTTAAGGGCTCACAGCACTAAAGATTTCACATGAAAGGGTCGTGATTGATTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407045.3
CDS-3UTR CAA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATATCATCATTTTGGCCCTaGCCCTTCATCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQISSFWP*PFISSF
Trigger: GAAGGAGGAGATGAAGGGCAAGGGCCAAAATGATGA...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CAA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAACTGGCATTTGCGGCATaGACTATAGCATCTACCTCT +
Preference number: 5 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKLAFAA*TIASTS
Trigger: AGAGGTAGATGCTATAGTCAATGCCGCAAATGCCAG...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAGACACCATCTGCATCTaGGCTCTGCTCTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: LLTLLFFKAKPTCATYREDTICI*ALLFHF
Trigger: GAAATGGAAGAGCAGAGCCAAGATGCAGATGGTGTC...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTAATATTTTCACCTCATaGTCCAGACCTTTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: SPSLVPTIPLASWVFSTANIFTS*SRPFPS
Trigger: ACTTGGAAAAGGTCTGGACAATGAGGTGAAAATATT...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAGCCACTTGGAACAAATaGTGCCTTGGGAACCCTGAA +
Preference number: 5 (lower is better)
Translates to: EAVQHLNAGLTKEARIILATWNK*CLGNPE
Trigger: TTCAGGGTTCCCAAGGCACAATTTGTTCCAAGTGGC...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTTCATAGGCATATGTTaGGGTCCTAAATGCACTGCC +
Preference number: 5 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFFIGIC*GPKCTA
Trigger: GGCAGTGCATTTAGGACCCAAACATATGCCTATGAA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCGCCATCCCTTGTGCCCACTATACCACTGGCATCTTGGGTTTTTAGTACTGCTTTTCAGGAGGAGCTTTaGATATTCATAGGCATATGT +
Preference number: 5 (lower is better)
Translates to: SPSLVPTIPLASWVFSTAFQEEL*IFIGIC
Trigger: ACATATGCCTATGAATATCAAAAGCTCCTCCTGAAA...AGCAGTACTAAAAACCCAAGATGCCAGTGGTATAGTGGGCACAAGGGATGGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGTTCAAATCTATTTCATaGTACAGCCTGTGCAATGGC +
Preference number: 5 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKFKSIS*YSLCNG
Trigger: GCCATTGCACAGGCTGTACAATGAAATAGATTTGAA...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAAAGCCATAAATGCCTGTaGAGATGCAGGGAAATGCAA +
Preference number: 5 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKSHKCL*RCREMQ
Trigger: TTGCATTTCCCTGCATCTCAACAGGCATTTATGGCT...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CAA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGTTTAGTTCCATTTCTTaGTTCCTTCGCTTCATCTTG +
Preference number: 5 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKFSSIS*FLRFIL
Trigger: CAAGATGAAGCGAAGGAACAAAGAAATGGAACTAAA...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGTGGTTTCCGAGGCTTTaGCCCATTTTCTATCCTGCC +
Preference number: 5 (lower is better)
Translates to: AGKSISFSNLFHCTACAMWFPRL*PIFYPA
Trigger: GGCAGGATAGAAAATGGGCAAAAGCCTCGGAAACCA...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATTCATAGGCATATGTTaGGGTCCTAAATGCACTGCC +
Preference number: 5 (lower is better)
Translates to: QLFKSISLYSLCNGSTSKFIGIC*GPKCTA
Trigger: GGCAGTGCATTTAGGACCCAAACATATGCCTATGAA...TTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCAACAATGACATGACTTaGGAACCCGGGGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSNNDMT*EPGEAV
Trigger: CACAGCCTCCCCGGGTTCCAAAGTCATGTCATTGTT...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTAACAATGACATGACTTaGGAACCCGGGGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLFFKAKPTCATYREMSFNNDMT*EPGEAV
Trigger: CACAGCCTCCCCGGGTTCCAAAGTCATGTCATTGTT...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CCTTTACAGTTATGCAGCAGAGAGTCACCTCTTGCTGGTAGTCTCCATGTGAAGAGAAACTGTCAATATTaGGATGACATCGTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PLQLCSRESPLAGSLHVKRNCQY*DDIVSW
Trigger: CCAAGAAACGATGTCATCCAAATATTGACAGTTTCT...CTTCACATGGAGACTACCAGCAAGAGGTGACTCTCTGCTGCATAACTGTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCTGCCACATAGCTGTATaGGAGTTTGGTTGGAAATTG +
Preference number: 5 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFCHIAV*EFGWKL
Trigger: CAATTTCCAACCAAACTCCAATACAGCTATGTGGCA...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS TCA 90 bp AATTGTGGTTACCAGGAGATTTTGCAGGAAGGTCATAGCCACATGTaGTTTTTGCATGTCCAGTATCACAGCCATTCAGGTTACGACATT +
Preference number: 5 (lower is better)
Translates to: NCGYQEILQEGHSHM*FLHVQYHSHSGYDI
Trigger: AATGTCGTAACCTGAATGGCTGTGATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATCTCCTGGTAACCACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464883.5
CDS GCA 90 bp TTATGCCATTGCACTCCAGAAAGAATTGTGGTTACCAGGAGATTTTaGAGGAAGGTCATAGCCACATGTGATTTTTGCATGTCCAGTATC +
Preference number: 5 (lower is better)
Translates to: LCHCTPERIVVTRRF*RKVIATCDFCMSSI
Trigger: GATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATCTCCTGGTAACCACAATTCTTTCTGGAGTGCAATGGCATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464883.5
CDS-3UTR CAA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTAAGCCATAAATGCCTGTaGAGATGCAGGGAAATGCAA +
Preference number: 5 (lower is better)
Translates to: EAVQHLNAGLTKEARIILSHKCL*RCREMQ
Trigger: TTGCATTTCCCTGCATCTCAACAGGCATTTATGGCT...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CAA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTCCATCGGGATGATCTaGGTCACGCACAGAATGATC +
Preference number: 5 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSSIGMI*VTHRMI
Trigger: GATCATTCTGTGCGTGACCAAGATCATCCCGATGGA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TCATTGATGATAAGGAGAATGCCAGGGCTGGATAATTTCCATCCTGGCTGTTTCCGGCATCTTCTTGGTTaGATGAAAGTTCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SLMIRRMPGLDNFHPGCFRHLLG*MKVLLF
Trigger: AAACAGAAGAACTTTCATCAAACCAAGAAGATGCCG...GAAACAGCCAGGATGGAAATTATCCAGCCCTGGCATTCTCCTTATCATCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATTACAAGGATAATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTATTTCTCATTAGCCACTaGGAACAAATTGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ITRIMPERCVNMGPSTKLFLISH*EQIVPW
Trigger: CCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAAA...TAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCATTATCCTTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTAGAGGAAAAGCCCCTTaGTCTCTCCTACAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: ITFILLEFLGRENSLLPLRGKAP*SLLQRG
Trigger: TCCTCGCTGTAGGAGAGACAAAGGGGCTTTTCCTCT...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS TCA 90 bp GTATTCAGTTGTACTCACATTTTGCAGGAAGGTCATAGCCACATGTaGTTTTTGCATGTCCAGTATCACAGCCATTCAGGTTACGACATT +
Preference number: 5 (lower is better)
Translates to: VFSCTHILQEGHSHM*FLHVQYHSHSGYDI
Trigger: AATGTCGTAACCTGAATGGCTGTGATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATGTGAGTACAACTGAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490428.5
CDS GCA 90 bp CCTTCTTTTTCTTCTTGGTCCTCTGTTAATGGAATCACTTCTGGTTaGTCCACAATCACGGCATCTTCTTGGTTTGATGAAAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PSFSSWSSVNGITSG*STITASSWFDESSS
Trigger: AGAAGAACTTTCATCAAACCAAGAAGATGCCGTGATTGTGGAGCAACCAGAAGTGATTCCATTAACAGAGGACCAAGAAGAAAAAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
ENST00000407045.3
ENST00000486914.1
ENST00000642719.1
ENST00000684519.1
CDS-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATTTGCAAGGTCTTCCTaGTGGGAACCATTAATATGG +
Preference number: 5 (lower is better)
Translates to: LLTLLFFKAKPTCATYREFARSS*WEPLIW
Trigger: CCATATTAATGGTTCCCACAAGGAAGACCTTGCAAA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CAA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTGACACCATCTGCATCTaGGCTCTGCTCTTCCATTTC +
Preference number: 5 (lower is better)
Translates to: ITFILLEFLGRENSLLPLDTICI*ALLFHF
Trigger: GAAATGGAAGAGCAGAGCCAAGATGCAGATGGTGTC...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATACTGCTGCTGGGCTCATaGATTCCTAAAATTTATCCT +
Preference number: 5 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQILLLGS*IPKIYP
Trigger: AGGATAAATTTTAGGAATCAATGAGCCCAGCAGCAG...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTACTGCTGCTGGGCTCATaGATTCCTAAAATTTATCCT +
Preference number: 5 (lower is better)
Translates to: EAVQHLNAGLTKEARIILLLLGS*IPKIYP
Trigger: AGGATAAATTTTAGGAATCAATGAGCCCAGCAGCAG...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAGCCACTTGGAACAAATaGTGCCTTGGGAACCCTGAA +
Preference number: 5 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSATWNK*CLGNPE
Trigger: TTCAGGGTTCCCAAGGCACAATTTGTTCCAAGTGGC...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp GCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGGCAGCACCAGCAAATATTTCTCATTAGCCACTaGGAACAAATTGTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: AFQIYFIVQPVQWQHQQIFLISH*EQIVPW
Trigger: CCAAGGCACAATTTGTTCCAAGTGGCTAATGAGAAA...TATTTGCTGGTGCTGCCATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp GAAGCAGTCCAGCATTTAAATGCCGGTTTAACAAAAGAGGCACGTATTATCCTACTTGTTGACTCTCTGTaGGGTCATTTACCTTGTCAA +
Preference number: 5 (lower is better)
Translates to: EAVQHLNAGLTKEARIILLVDSL*GHLPCQ
Trigger: TTGACAAGGTAAATGACCCAACAGAGAGTCAACAAG...TAGGATAATACGTGCCTCTTTTGTTAAACCGGCATTTAAATGCTGGACTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378058.7
ENST00000402914.5
CDS TCA 90 bp TTCTTGCATCCAAATTTGATTTTGCAGGAAGGTCATAGCCACATGTaGTTTTTGCATGTCCAGTATCACAGCCATTCAGGTTACGACATT +
Preference number: 5 (lower is better)
Translates to: FLHPNLILQEGHSHM*FLHVQYHSHSGYDI
Trigger: AATGTCGTAACCTGAATGGCTGTGATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATCAAATTTGGATGCAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463861.5
ENST00000497992.1
CDS-3UTR CAA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTCATTCCTTAATGGTGTaGAGGGCAATGACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: ITFILLEFLGRENSLLPLHSLMV*RAMTAA
Trigger: TGCTGCAGTCATTGCCCTCAACACCATTAAGGAATG...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CAA 90 bp ATGCCTGAAAGATGCGTCAACATGGGTCCCTCCACCAAATTAAAGGAAACTTTTAATATTTTCACCTCATaGTCCAGACCTTTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: MPERCVNMGPSTKLKETFNIFTS*SRPFPS
Trigger: ACTTGGAAAAGGTCTGGACAATGAGGTGAAAATATT...AAAAGTTTCCTTTAATTTGGTGGAGGGACCCATGTTGACGCATCTTTCAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAGACGGCAACTTTCAATaGAGTTATAAAGATGGCATG +
Preference number: 5 (lower is better)
Translates to: LLTLLFFKAKPTCATYREDGNFQ*SYKDGM
Trigger: CATGCCATCTTTATAACTCAATTGAAAGTTGCCGTC...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCACACACCTTTTTCTTCTaGTTGCTGGGGTACATGTTG +
Preference number: 5 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSHTFFF*LLGYML
Trigger: CAACATGTACCCCAGCAACAAGAAGAAAAAGGTGTG...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217246.8
CDS-3UTR CAA 90 bp CTGCTAACTTTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAATTTAGTTCCATTTCTTaGTTCCTTCGCTTCATCTTG +
Preference number: 5 (lower is better)
Translates to: LLTLLFFKAKPTCATYREFSSIS*FLRFIL
Trigger: CAAGATGAAGCGAAGGAACAAAGAAATGGAACTAAA...TTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAAAGTTAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCGGAACAAATTGTGCCTaGGGAACCCTGAAGAAAATA +
Preference number: 5 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSGTNCA*GTLKKI
Trigger: TATTTTCTTCAGGGTTCCCAAGGCACAATTTGTTCC...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS GCA 90 bp ATGATAGAATGCTGTTCAGGGGAATATAGTCTCTTAGGTATTCTTTaGGTCTCTCTTCTAAGGTCATCTTCAATAAACGTTCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: MIECCSGEYSLLGIL*VSLLRSSSINVLSP
Trigger: AGGAGAAAGAACGTTTATTGAAGATGACCTTAGAAGAGAGACGCAAAGAATACCTAAGAGACTATATTCCCCTGAACAGCATTCTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000217246.8
ENST00000462552.5
ENST00000477147.5
ENST00000483997.5
ENST00000490428.5
ENST00000492055.5
ENST00000494602.5
ENST00000642719.1
ENST00000684519.1
CDS CCA 90 bp AACGTGGTAAAATTTCTACAGGCAAATGACAGCTCTGGAACTAACTaGAGATTTACAGAAGTGTATATATCTGATTGGCACTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: NVVKFLQANDSSGTN*RFTEVYISDWHSPF
Trigger: AAAAGGAGAGTGCCAATCAGATATATACACTTCTGTAAATCTCCAGTTAGTTCCAGAGCTGTCATTTGCCTGTAGAAATTTTACCACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS-3UTR CAA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATTTGCAAGGTCTTCCTaGTGGGAACCATTAATATGG +
Preference number: 5 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSFARSS*WEPLIW
Trigger: CCATATTAATGGTTCCCACAAGGAAGACCTTGCAAA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CAA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCATGATTTATAGCAATTaGCAAGGTCTTCCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSMIYSN*QGLPCG
Trigger: CCCACAAGGAAGACCTTGCAAATTGCTATAAATCAT...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTCGGCATCTTCTTGGTTaGATGAAAGTTCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: LLFFKAKPTCATYREMSFRHLLG*MKVLLF
Trigger: AAACAGAAGAACTTTCATCAAACCAAGAAGATGCCG...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGTCTAGCAGATTGCACTaGTCAAATACTTCACAAGAA +
Preference number: 5 (lower is better)
Translates to: AGKSISFSNLFHCTACAMSSRLH*SNTSQE
Trigger: TTCTTGTGAAGTATTTGACAAGTGCAATCTGCTAGA...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTTCAAATCTATTTCATaGTACAGCCTGTGCAATGGC +
Preference number: 5 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSFKSIS*YSLCNG
Trigger: GCCATTGCACAGGCTGTACAATGAAATAGATTTGAA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTTTCAAATCTATTTCATaGTACAGCCTGTGCAATGGC +
Preference number: 5 (lower is better)
Translates to: LLFFKAKPTCATYREMSFFKSIS*YSLCNG
Trigger: GCCATTGCACAGGCTGTACAATGAAATAGATTTGAA...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp GCGGGAAAATCAATCAGCTTTTCAAATCTATTTCATTGTACAGCCTGTGCAATGTGTATTGGAGTTTGGTaGGAAATTGACATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: AGKSISFSNLFHCTACAMCIGVW*EIDIQN
Trigger: ATTCTGGATGTCAATTTCCAACCAAACTCCAATACA...CATTGCACAGGCTGTACAATGAAATAGATTTGAAAAGCTGATTGATTTTCCCGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCACTTGTTGACTCTCTGTaGGGTCATTTACCTTGTCAA +
Preference number: 5 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSLVDSL*GHLPCQ
Trigger: TTGACAAGGTAAATGACCCAACAGAGAGTCAACAAG...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAATGATTTATAGCAATTaGCAAGGTCTTCCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSMIYSN*QGLPCG
Trigger: CCCACAAGGAAGACCTTGCAAATTGCTATAAATCAT...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217246.8
ENST00000402914.5
CDS-3UTR CAA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTCGGCATCTTCTTGGTTaGATGAAAGTTCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: ITFILLEFLGRENSLLPLRHLLG*MKVLLF
Trigger: AAACAGAAGAACTTTCATCAAACCAAGAAGATGCCG...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp AGCCCTTACAAGGAAGATGGATTTAAGAAGATATGCAACAAACGATATGTTTCCTTTAGTTCCATTTCTTaGTTCCTTCGCTTCATCTTG +
Preference number: 5 (lower is better)
Translates to: SPYKEDGFKKICNKRYVSFSSIS*FLRFIL
Trigger: CAAGATGAAGCGAAGGAACAAAGAAATGGAACTAAA...GGAAACATATCGTTTGTTGCATATCTTCTTAAATCCATCTTCCTTGTAAGGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTAGAAACTGTCAATATTaGGATGACATCGTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: LLFFKAKPTCATYREMSFRNCQY*DDIVSW
Trigger: CCAAGAAACGATGTCATCCAAATATTGACAGTTTCT...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp TTGTTATTTTTCAAAGCAAAGCCGACATGCGCCACATACAGAGAAATGTCTTTTAGGTCTCTTCCATCATaGTTCATTAGAAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: LLFFKAKPTCATYREMSFRSLPS*FIRKSL
Trigger: CAGAGATTTTCTAATGAACAATGATGGAAGAGACCT...AAAAGACATTTCTCTGTATGTGGCGCATGTCGGCTTTGCTTTGAAAAATAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCATTTCAGGAGGAGCTTTaGATATTCATAGGCATATGT +
Preference number: 5 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSFQEEL*IFIGIC
Trigger: ACATATGCCTATGAATATCAAAAGCTCCTCCTGAAA...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTAGAAACTGTCAATATTaGGATGACATCGTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: ITFILLEFLGRENSLLPLRNCQY*DDIVSW
Trigger: CCAAGAAACGATGTCATCCAAATATTGACAGTTTCT...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATTACTTTCATTCTTCTAGAATTTTTAGGCAGAGAGAATTCCCTCCTTCCACTTTCTAGCAGATTGCACTaGTCAAATACTTCACAAGAA +
Preference number: 5 (lower is better)
Translates to: ITFILLEFLGRENSLLPLSSRLH*SNTSQE
Trigger: TTCTTGTGAAGTATTTGACAAGTGCAATCTGCTAGA...AAGTGGAAGGAGGGAATTCTCTCTGCCTAAAAATTCTAGAAGAATGAAAGTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS-3UTR CAA 90 bp ATAGATGGAAGAATAAACAAATTCAGGAGTCGGGCTGAAGATATTTATTCCTCAAGGTCTCTTCCATCATaGTTCATTAGAAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: IDGRINKFRSRAEDIYSSRSLPS*FIRKSL
Trigger: CAGAGATTTTCTAATGAACAATGATGGAAGAGACCT...TGAGGAATAAATATCTTCAGCCCGACTCCTGAATTTGTTTATTCTTCCATCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
CDS CAA 72 bp CAGCTTGGAGCAGAAGAGAGGATGGCTGTGGCAGGCTaGGTGCATGGTGTTAAAGCTGGCTGTGGAGCATCC +
Preference number: 6 (lower is better)
Translates to: QLGAEERMAVAG*VHGVKAGCGAS
Trigger: GGATGCTCCACAGCCAGCTTTAACACCATGCACCAAGCCTGCCACAGCCATCCTCTCTTCTGCTCCAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS CAA 90 bp GTCTCTCAGCAGCTTGGAGCAGAAGAGAGGATGGCTGTGGCAGGCTaGGTGCATGGTGTTAAAGCTGGCTGTGGAGCATCCTTTTTCAGT +
Preference number: 6 (lower is better)
Translates to: VSQQLGAEERMAVAG*VHGVKAGCGASFFS
Trigger: ACTGAAAAAGGATGCTCCACAGCCAGCTTTAACACCATGCACCAAGCCTGCCACAGCCATCCTCTCTTCTGCTCCAAGCTGCTGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS GCA 72 bp TTGGAGCAGAAGAGAGGATGGCTGTGGCAGGCTTGGTaGATGGTGTTAAAGCTGGCTGTGGAGCATCCTTTT +
Preference number: 6 (lower is better)
Translates to: LEQKRGWLWQAW*MVLKLAVEHPF
Trigger: AAAAGGATGCTCCACAGCCAGCTTTAACACCATGCACCAAGCCTGCCACAGCCATCCTCTCTTCTGCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS GCA 72 bp GGGGACTGGCAAGCTGAATGCAGTGCAGACAAACCCTaGAAGCCTCAAAACTCAGAACCTCCATTTCCTGTC +
Preference number: 6 (lower is better)
Translates to: GDWQAECSADKP*KPQNSEPPFPV
Trigger: GACAGGAAATGGAGGTTCTGAGTTTTGAGGCTTGCAGGGTTTGTCTGCACTGCATTCAGCTTGCCAGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS TCA 72 bp ACAGGCAAGGCAGTTGGACTTTCGTATGTTACATCATaGGTAATTGCTGGCAGGCCATCCTCAGGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: TGKAVGLSYVTS*VIAGRPSSGRG
Trigger: GCCTCTCCCTGAGGATGGCCTGCCAGCAATTACTCATGATGTAACATACGAAAGTCCAACTGCCTTGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494602.5
CDS GCA 72 bp GGCAAGCCATTCCTTAATGGTGTTGAGGGCAATGACTaGAGCAGGCTCGTTGGGAAAGCCATAAATGCCTGT +
Preference number: 6 (lower is better)
Translates to: GKPFLNGVEGND*SRLVGKAINAC
Trigger: ACAGGCATTTATGGCTTTCCCAACGAGCCTGCTGCAGTCATTGCCCTCAACACCATTAAGGAATGGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217246.8
ENST00000402914.5
ENST00000642719.1
ENST00000684519.1
CDS GCA 72 bp TTGGGGAGCTCGGATTTTAAGGCAGTAGCTTGCCGATaGTCCCAGCTGAATAAAGCCCTTCCTTCTACAACT +
Preference number: 6 (lower is better)
Translates to: LGSSDFKAVACR*SQLNKALPSTT
Trigger: AGTTGTAGAAGGAAGGGCTTTATTCAGCTGGGAGCATCGGCAAGCTACTGCCTTAAAATCCGAGCTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407045.3
CDS TCA 72 bp AAAATCTTCATCTTTACAGTCTTCAACTGCCTCTTCTaGAGCAGGGCCGGGCACAGTGACAGTGTTGACACC +
Preference number: 6 (lower is better)
Translates to: KIFIFTVFNCLF*SRAGHSDSVDT
Trigger: GGTGTCAACACTGTCACTGTGCCCGGCCCTGCTTCAGAAGAGGCAGTTGAAGACTGTAAAGATGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
ENST00000486914.1
ENST00000642719.1
ENST00000684519.1
CDS CCA 72 bp CTGCTCTATGAATACAGCCATCCAATTACCCCAAAATaGGGACAGAAGCTGGAGGTCTCTGATTCTGAACCC +
Preference number: 6 (lower is better)
Translates to: LLYEYSHPITPK*GQKLEVSDSEP
Trigger: GGGTTCAGAATCAGAGACCTCCAGCTTCTGTCCCCATTTTGGGGTAATTGGATGGCTGTATTCATAGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464883.5
ENST00000497992.1
CDS TCA 72 bp ACAGTGTTGACACCATCTCTGCAGATGAGGCCTAGGTaGCTTCTCAAAAGAAATCTGAGCCTACCTGCATCT +
Preference number: 6 (lower is better)
Translates to: TVLTPSLQMRPR*LLKRNLSLPAS
Trigger: AGATGCAGGTAGGCTCAGATTTCTTTTGAGAAGTCACCTAGGCCTCATCTGCAGAGATGGTGTCAACACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486914.1
CDS GCA 72 bp GGCCCTTGCCCTTCATCTCCTCCTTCCATGATAGAATaGTGTTCAGGGGAATATAGTCTCTTAGGTATTCTT +
Preference number: 6 (lower is better)
Translates to: GPCPSSPPSMIE*CSGEYSLLGIL
Trigger: AAGAATACCTAAGAGACTATATTCCCCTGAACAGCATTCTATCATGGAAGGAGGAGATGAAGGGCAAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000217246.8
ENST00000462552.5
ENST00000477147.5
ENST00000483997.5
ENST00000490428.5
ENST00000492055.5
ENST00000494602.5
ENST00000642719.1
ENST00000684519.1
CDS GCA 72 bp TTCAACCATGAGAGATGCATCCATCATTTTGGCCCTTaGCCTTCATCTCCTCCTTCCATGATAGAATGCTGT +
Preference number: 6 (lower is better)
Translates to: FNHERCIHHFGP*PSSPPSMIECC
Trigger: ACAGCATTCTATCATGGAAGGAGGAGATGAAGGGCAAGGGCCAAAATGATGGATGCATCTCTCATGGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462552.5
ENST00000483997.5
CDS GCA 72 bp CCAGAATACCACTACAAACCTCATCATTTTGGCCCTTaGCCTTCATCTCCTCCTTCCATGATAGAATGCTGT +
Preference number: 6 (lower is better)
Translates to: PEYHYKPHHFGP*PSSPPSMIECC
Trigger: ACAGCATTCTATCATGGAAGGAGGAGATGAAGGGCAAGGGCCAAAATGATGAGGTTTGTAGTGGTATTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492055.5
CDS CCA 72 bp TTCCTTGTGGGAACCATTAATATGGCCCCTGGCTATTaGCCCTACAGTATGGATGACATATTTTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: FLVGTINMAPGY*PYSMDDIFCRK
Trigger: CTTCCTGCAAAATATGTCATCCATACTGTAGGGCCAATAGCCAGGGGCCATATTAATGGTTCCCACAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000642719.1
ENST00000684519.1
CDS CAA 72 bp TCCAGAATACCACTACAAACCTCATCATTTTGGCCCTaGCCCTTCATCTCCTCCTTCCATGATAGAATGCTG +
Preference number: 6 (lower is better)
Translates to: SRIPLQTSSFWP*PFISSFHDRML
Trigger: CAGCATTCTATCATGGAAGGAGGAGATGAAGGGCAAGGGCCAAAATGATGAGGTTTGTAGTGGTATTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492055.5
CDS TCA 72 bp TACCAGGAGATTTTGCAGGAAGGTCATAGCCACATGTaGTTTTTGCATGTCCAGTATCACAGCCATTCAGGT +
Preference number: 6 (lower is better)
Translates to: YQEILQEGHSHM*FLHVQYHSHSG
Trigger: ACCTGAATGGCTGTGATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATCTCCTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464883.5
CDS GCA 72 bp CAGGCTCGTTGGGAAAGCCATAAATGCCTGTTGAGATaGAGGGAAATGCAACTGATCGGATGTTATTTTCTT +
Preference number: 6 (lower is better)
Translates to: QARWESHKCLLR*REMQLIGCYFL
Trigger: AAGAAAATAACATCCGATCAGTTGCATTTCCCTGCATCTCAACAGGCATTTATGGCTTTCCCAACGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217246.8
ENST00000402914.5
ENST00000642719.1
ENST00000684519.1
CDS CCA 72 bp AGTTACAACAGAGGGGCATCACTAGCTCTTGCTGTCTaGGTCAGTCATGTAAACGTGGTAAAATTTCTACAG +
Preference number: 6 (lower is better)
Translates to: SYNRGASLALAV*VSHVNVVKFLQ
Trigger: CTGTAGAAATTTTACCACGTTTACATGACTGACCCAGACAGCAAGAGCTAGTGATGCCCCTCTGTTGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS TCA 72 bp TGTACTCACATTTTGCAGGAAGGTCATAGCCACATGTaGTTTTTGCATGTCCAGTATCACAGCCATTCAGGT +
Preference number: 6 (lower is better)
Translates to: CTHILQEGHSHM*FLHVQYHSHSG
Trigger: ACCTGAATGGCTGTGATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATGTGAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490428.5
CDS TCA 72 bp AATTCTTGGAGAAGGAATCAGCTGAAAATTATTGCCTaGCCAAACTCTCAGCAGAAGGGAGAGTGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: NSWRRNQLKIIA*PNSQQKGECFS
Trigger: ACTGAAGCACTCTCCCTTCTGCTGAGAGTTTGGTCAGGCAATAATTTTCAGCTGATTCCTTCTCCAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494602.5
CDS GCA 72 bp TCTTCTTGGTCCTCTGTTAATGGAATCACTTCTGGTTaGTCCACAATCACGGCATCTTCTTGGTTTGATGAA +
Preference number: 6 (lower is better)
Translates to: SSWSSVNGITSG*STITASSWFDE
Trigger: TTCATCAAACCAAGAAGATGCCGTGATTGTGGAGCAACCAGAAGTGATTCCATTAACAGAGGACCAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
ENST00000407045.3
ENST00000486914.1
ENST00000642719.1
ENST00000684519.1
CDS GCA 72 bp AGATTTTGCAGGAAGGTCATAGCCACATGTGATTTTTaGATGTCCAGTATCACAGCCATTCAGGTTACGACA +
Preference number: 6 (lower is better)
Translates to: RFCRKVIATCDF*MSSITAIQVTT
Trigger: TGTCGTAACCTGAATGGCTGTGATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464883.5
CDS GCA 72 bp TGCACTCCAGAAAGAATTGTGGTTACCAGGAGATTTTaGAGGAAGGTCATAGCCACATGTGATTTTTGCATG +
Preference number: 6 (lower is better)
Translates to: CTPERIVVTRRF*RKVIATCDFCM
Trigger: CATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATCTCCTGGTAACCACAATTCTTTCTGGAGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464883.5
CDS GCA 72 bp ACATTTTGCAGGAAGGTCATAGCCACATGTGATTTTTaGATGTCCAGTATCACAGCCATTCAGGTTACGACA +
Preference number: 6 (lower is better)
Translates to: TFCRKVIATCDF*MSSITAIQVTT
Trigger: TGTCGTAACCTGAATGGCTGTGATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490428.5
CDS GCA 72 bp GGAAAATTCTTGGAGAAGGAATCAGCTGAAAATTATTaGCTGACCAAACTCTCAGCAGAAGGGAGAGTGCTT +
Preference number: 6 (lower is better)
Translates to: GKFLEKESAENY*LTKLSAEGRVL
Trigger: AAGCACTCTCCCTTCTGCTGAGAGTTTGGTCAGGCAATAATTTTCAGCTGATTCCTTCTCCAAGAATTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494602.5
CDS CAA 72 bp AGGAAAAGTCTAAACGACAACAGGAAGGCACTTTGCTaGCTCTCTTCTATAAGCACTTCCCAACACACATTC +
Preference number: 6 (lower is better)
Translates to: RKSLNDNRKALC*LSSISTSQHTF
Trigger: GAATGTGTGTTGGGAAGTGCTTATAGAAGAGAGCAAGCAAAGTGCCTTCCTGTTGTCGTTTAGACTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464883.5
CDS TCA 72 bp CCAAATTTGATTTTGCAGGAAGGTCATAGCCACATGTaGTTTTTGCATGTCCAGTATCACAGCCATTCAGGT +
Preference number: 6 (lower is better)
Translates to: PNLILQEGHSHM*FLHVQYHSHSG
Trigger: ACCTGAATGGCTGTGATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATCAAATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463861.5
ENST00000497992.1
CDS GCA 72 bp ATATTTTGCAGGAAGGTCATAGCCACATGTGATTTTTaGATGTCCAGTATCACAGCCATTCAGGTTACGACA +
Preference number: 6 (lower is better)
Translates to: IFCRKVIATCDF*MSSITAIQVTT
Trigger: TGTCGTAACCTGAATGGCTGTGATACTGGACATGCAAAAATCACATGTGGCTATGACCTTCCTGCAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217246.8
ENST00000642719.1
ENST00000684519.1
CDS CAA 72 bp CTTCTGGTTGCTCCACAATCACGGCATCTTCTTGGTTaGATGAAAGTTCTTCTGTTTCCATATATGAGCTCT +
Preference number: 6 (lower is better)
Translates to: LLVAPQSRHLLG*MKVLLFPYMSS
Trigger: AGAGCTCATATATGGAAACAGAAGAACTTTCATCAAACCAAGAAGATGCCGTGATTGTGGAGCAACCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217246.8
ENST00000378058.7
ENST00000402914.5
ENST00000407045.3
ENST00000486914.1
ENST00000642719.1
ENST00000684519.1
CDS CAA 90 bp GGAATGCAGATTAAGGAAAAGTCTAAACGACAACAGGAAGGCACTTaGCTTGCTCTCTTCTATAAGCACTTCCCAACACACATTCCTTTA +
Preference number: 6 (lower is better)
Translates to: GMQIKEKSKRQQEGT*LALFYKHFPTHIPL
Trigger: TAAAGGAATGTGTGTTGGGAAGTGCTTATAGAAGAGAGCAAGCAAAGTGCCTTCCTGTTGTCGTTTAGACTTTTCCTTAATCTGCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464883.5
CDS CCA 72 bp AAATTTCTACAGGCAAATGACAGCTCTGGAACTAACTaGAGATTTACAGAAGTGTATATATCTGATTGGCAC +
Preference number: 6 (lower is better)
Translates to: KFLQANDSSGTN*RFTEVYISDWH
Trigger: GTGCCAATCAGATATATACACTTCTGTAAATCTCCAGTTAGTTCCAGAGCTGTCATTTGCCTGTAGAAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463861.5
CDS CAA 90 bp CAGTTATACACTGGAGTAAAACAAGTTAAGATGTCTCATCTGGTTTaGAAACAGTATTCAGTTGTACTCACATTTTGCAGGAAGGTCATA +
Preference number: 6 (lower is better)
Translates to: QLYTGVKQVKMSHLV*KQYSVVLTFCRKVI
Trigger: TATGACCTTCCTGCAAAATGTGAGTACAACTGAATACTGTTTCAAAACCAGATGAGACATCTTAACTTGTTTTACTCCAGTGTATAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490428.5
CDS CAA 72 bp ACTGGAGTAAAACAAGTTAAGATGTCTCATCTGGTTTaGAAACAGTATTCAGTTGTACTCACATTTTGCAGG +
Preference number: 6 (lower is better)
Translates to: TGVKQVKMSHLV*KQYSVVLTFCR
Trigger: CCTGCAAAATGTGAGTACAACTGAATACTGTTTCAAAACCAGATGAGACATCTTAACTTGTTTTACTCCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490428.5