RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAB21L4 (Homo sapiens)

Ensembl gene IDs: ENSG00000172478

Ensembl transcript IDs: ENST00000307486.12, ENST00000388934.5, ENST00000402775.6, ENST00000414499.1, ENST00000454476.2

Found 409 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTaGTCCAAGAGGCCTGCCCTGCCCCACCAGGCACTGAAAGACTCT +
Preference number: 1 (lower is better)
Translates to: WRAWHLHPGPDPGRR*SKRPALPHQALKDS
Trigger: AGAGTCTTTCAGTGCCTGGTGGGGCAGGGCAGGCCTCTTGGAGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 90 bp AGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTaGTTGACAACACCACGTGGCTGGGTCAACATGCACCACATGGAG +
Preference number: 1 (lower is better)
Translates to: RQGQVLSSRSPADAV*LTTPRGWVNMHHME
Trigger: CTCCATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 90 bp ACAGTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATaGTGTTTGCTTGACAACACCACGTGGCTGGGTCAACATGCACCA +
Preference number: 1 (lower is better)
Translates to: TVQAGPSPQLQVSCR*CLLDNTTWLGQHAP
Trigger: TGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 90 bp CAGGTGGGCTCATGGCTGTGTGTGCACCCTCAGTTGGCTTTAGTTTaGTCTAAGAACGAGGTAGGAGGTGGGGATGCCTGGGGAAGGGGG +
Preference number: 1 (lower is better)
Translates to: QVGSWLCVHPQLALV*SKNEVGGGDAWGRG
Trigger: CCCCCTTCCCCAGGCATCCCCACCTCCTACCTCGTTCTTAGAGCAAACTAAAGCCAACTGAGGGTGCACACACAGCCATGAGCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR TCA 90 bp AGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTaGCAACACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCT +
Preference number: 1 (lower is better)
Translates to: RAKSSAPGLLPMLFA*QHHVAGSTCTTWRA
Trigger: AGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 90 bp GCCCGTTTCTTCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTaGAGAGTCTGTTGGGGAGCCAAGAACAGGTGGCTGAGACCAGGT +
Preference number: 1 (lower is better)
Translates to: ARFFFQTSQEPPMVQ*RVCWGAKNRWLRPG
Trigger: ACCTGGTCTCAGCCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGAAGAAACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 90 bp TGGCATACAGTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTaGCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAACAT +
Preference number: 1 (lower is better)
Translates to: WHTVQAGPSPQLQVS*RCCLLDNTTWLGQH
Trigger: ATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCACTGTATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CCA 90 bp TCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTaGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGG +
Preference number: 1 (lower is better)
Translates to: SRSPADAVCLTTPRG*VNMHHMESLAPASR
Trigger: CCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTaGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATC +
Preference number: 1 (lower is better)
Translates to: QLQVSCRCCLLDNTT*LGQHAPHGELGTCI
Trigger: GATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR TCA 90 bp AGCATGGCTGGGAGGCCTCAGGAAACTGACAATCATGGTGGAAGGTaGAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAG +
Preference number: 1 (lower is better)
Translates to: SMAGRPQETDNHGGR*RRRRHILHGRRKRK
Trigger: CTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACCTTCCACCATGATTGTCAGTTTCCTGAGGCCTCCCAGCCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 90 bp CAAAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTaGAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCT +
Preference number: 1 (lower is better)
Translates to: QNQIYSISSPRNGIQ*RQGQVLSSRSPADA
Trigger: AGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGACCACATGGAGAGCTTaGCACCTGCATCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRTTWRA*HLHPGP
Trigger: AGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGT...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp CAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAGGAGCCTCCCATGGTaGAGTGCAGAGTCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: QAGPSPQLQVSCRCCLLDRSLPW*SAESVG
Trigger: CCCAACAGACTCTGCACTGCACCATGGGAGGCTCCT...GTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CAA 90 bp CAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTaGACAACACCACGTGGCTGGGTCAACATGCACCACATGGAGAGC +
Preference number: 2 (lower is better)
Translates to: QGQVLSSRSPADAVC*TTPRGWVNMHHMES
Trigger: GCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CAA 90 bp CAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTaGCTTGACAACACCACGTGGCTGGGTCAACATGCACCACATGGA +
Preference number: 2 (lower is better)
Translates to: QAGPSPQLQVSCRCC*LDNTTWLGQHAPHG
Trigger: TCCATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp ACAGTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGACTCTCAGAGGCCACTaGTGGGGACAAAATCCCTCC +
Preference number: 2 (lower is better)
Translates to: TVQAGPSPQLQVSCRCCLTLRGH*WGQNPS
Trigger: GGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAGAGT...CAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTCAGTGCAGAGTCTGTTaGGGAGCCAAGAACAGGTGG +
Preference number: 2 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLQCRVC*GAKNRW
Trigger: CCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTG...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGTCAACATGCACCACATaGAGAGCTTGGCACCTGCAT +
Preference number: 2 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRSTCTT*RAWHLH
Trigger: ATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGA...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGGGGCAGGTGGGCTCATaGCTGTGTGTGCACCCTCAG +
Preference number: 2 (lower is better)
Translates to: IQSISGATSTGTGRSRWEGQVGS*LCVHPQ
Trigger: CTGAGGGTGCACACACAGCCATGAGCCCACCTGCCC...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAGTGCAGAGTCTGTTaGGGAGCCAAGAACAGGTGG +
Preference number: 2 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGQCRVC*GAKNRW
Trigger: CCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTG...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp ACAGTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTaGCTGGGTCAACATGCACCA +
Preference number: 2 (lower is better)
Translates to: TVQAGPSPQLQVSCRCCLLDNTT*LGQHAP
Trigger: TGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAG...CAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCGGGCAGGTGGGCTCATaGCTGTGTGTGCACCCTCAG +
Preference number: 2 (lower is better)
Translates to: PPTLGITSLPETWVGTQIGQVGS*LCVHPQ
Trigger: CTGAGGGTGCACACACAGCCATGAGCCCACCTGCCC...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR TCA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATGCCCCACCAGGCACTaGAAGACTCTCAGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRCPTRH*KTLRGH
Trigger: GTGGCCTCTGAGAGTCTTTCAGTGCCTGGTGGGGCA...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTTCAACATGCACCACATaGAGAGCTTGGCACCTGCAT +
Preference number: 2 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLSTCTT*RAWHLH
Trigger: ATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGA...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCGGAGAGCTTGGCACCTaGATCCAGGCCCTGACCCAG +
Preference number: 2 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRAGELGT*IQALTQ
Trigger: CTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCC...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGAGGAATGGCATACAGTaGAGGCAGGGCCAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: IQSISGATSTGTGRSRWERNGIQ*RQGQVL
Trigger: GAGGACTTGGCCCTGCCTGCACTGTATGCCATTCCT...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGCAGTTGGCTTTAGTTTaGTCTAAGAACGAGGTAGGA +
Preference number: 2 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRQLALV*SKNEVG
Trigger: TCCTACCTCGTTCTTAGAGCAAACTAAAGCCAACTG...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCCTCAGAGGCCACTGCTaGGGACAAAATCCCTCCACT +
Preference number: 2 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEALRGHC*GQNPST
Trigger: AGTGGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAG...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR TCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCTGCCCCACCAGGCACTaGAAGACTCTCAGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVCPTRH*KTLRGH
Trigger: GTGGCCTCTGAGAGTCTTTCAGTGCCTGGTGGGGCA...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCGTGGCTGGGTCAACATaGACCACATGGAGAGCTTGG +
Preference number: 2 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSVAGST*TTWRAW
Trigger: CCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCAC...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCTTCGTCACCAAGGAATaGCATACAGTGCAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEAFVTKE*HTVQAG
Trigger: CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAA...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCACAACACCACGTGGCTaGGTCAACATGCACCACATG +
Preference number: 2 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSTTPRG*VNMHHM
Trigger: CATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGT...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCTTCGTCACCAAGGAATaGCATACAGTGCAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSFVTKE*HTVQAG
Trigger: CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAA...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCCCTGCCGATGCTGTTTaGTTGACAACACCACGTGGC +
Preference number: 2 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRAPADAV*LTTPRG
Trigger: GCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGG...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAGGAATGGCATACAGTaGAGGCAGGGCCAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: GEGEGGISYMAGERGREQRNGIQ*RQGQVL
Trigger: GAGGACTTGGCCCTGCCTGCACTGTATGCCATTCCT...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGACCACATGGAGAGCTTaGCACCTGCATCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRTTWRA*HLHPGP
Trigger: AGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGT...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGACTCTCAGAGGCCACTaGTGGGGACAAAATCCCTCC +
Preference number: 2 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRTLRGH*WGQNPS
Trigger: GGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAGAGT...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGGTGGCTGGGTCAACATaGACCACATGGAGAGCTTGG +
Preference number: 2 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRVAGST*TTWRAW
Trigger: CCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCAC...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCACCACATGGAGAGCTTaGCACCTGCATCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: THYHENSKGEIHPHDPITTTWRA*HLHPGP
Trigger: AGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGT...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAACAACACCACGTGGCTaGGTCAACATGCACCACATG +
Preference number: 2 (lower is better)
Translates to: GEGEGGISYMAGERGREQTTPRG*VNMHHM
Trigger: CATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGT...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCCTTGACAACACCACGTaGCTGGGTCAACATGCACCA +
Preference number: 2 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVLDNTT*LGQHAP
Trigger: TGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAG...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATACTCTCAGAGGCCACTaGTGGGGACAAAATCCCTCC +
Preference number: 2 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNTLRGH*WGQNPS
Trigger: GGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAGAGT...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATGTGGCTGGGTCAACATaGACCACATGGAGAGCTTGG +
Preference number: 2 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNVAGST*TTWRAW
Trigger: CCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCAC...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCCAGTTGGCTTTAGTTTaGTCTAAGAACGAGGTAGGA +
Preference number: 2 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEAQLALV*SKNEVG
Trigger: TCCTACCTCGTTCTTAGAGCAAACTAAAGCCAACTG...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCACAGTGCAGAGTCTGTTaGGGAGCCAAGAACAGGTGG +
Preference number: 2 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPQCRVC*GAKNRW
Trigger: CCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTG...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCCTCAGAGGCCACTGCTaGGGACAAAATCCCTCCACT +
Preference number: 2 (lower is better)
Translates to: THYHENSKGEIHPHDPITLRGHC*GQNPST
Trigger: AGTGGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAG...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCACAGGTCTCCTGCCGATaGTGTTTGCTTGACAACACC +
Preference number: 2 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPQVSCR*CLLDNT
Trigger: GGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTG...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCTCAACATGCACCACATaGAGAGCTTGGCACCTGCAT +
Preference number: 2 (lower is better)
Translates to: THYHENSKGEIHPHDPITSTCTT*RAWHLH
Trigger: ATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGA...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCATTCTACCTGAGATTTaGGTGGGGATACAGATACAA +
Preference number: 2 (lower is better)
Translates to: PPTLGITSLPETWVGTQIILPEI*VGIQIQ
Trigger: TTGTATCTGTATCCCCACCCAAATCTCAGGTAGAAT...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCGGACAGTACCCTTTCTaGTGTGTATACCCAGCACAT +
Preference number: 2 (lower is better)
Translates to: THYHENSKGEIHPHDPITGQYPF*CVYPAH
Trigger: ATGTGCTGGGTATACACAGCAGAAAGGGTACTGTCC...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCATACCTGAGACTTGGGTaGGGACACAGATCCAATTCT +
Preference number: 2 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPYLRLG*GHRSNS
Trigger: AGAATTGGATCTGTGTCCCCACCCAAGTCTCAGGTA...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR GCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCCAGTTGGCTTTAGTTTaGTCTAAGAACGAGGTAGGA +
Preference number: 2 (lower is better)
Translates to: THYHENSKGEIHPHDPITQLALV*SKNEVG
Trigger: TCCTACCTCGTTCTTAGAGCAAACTAAAGCCAACTG...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCATTCTACCTGAGATTTaGGTGGGGATACAGATACAA +
Preference number: 2 (lower is better)
Translates to: THYHENSKGEIHPHDPITILPEI*VGIQIQ
Trigger: TTGTATCTGTATCCCCACCCAAATCTCAGGTAGAAT...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 72 bp TGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTaGTCCAAGAGGCCTGCCCTGCCCCACCAGGCACTG +
Preference number: 3 (lower is better)
Translates to: WHLHPGPDPGRR*SKRPALPHQAL
Trigger: CAGTGCCTGGTGGGGCAGGGCAGGCCTCTTGGAGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CCA 72 bp CACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTaGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: HVAGSTCTTWRA*HLHPGPDPGRR
Trigger: CCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CAA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCGCAGTGCAGAGTCTGTaGGGGAGCCAAGAACAGGTG +
Preference number: 3 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEAAVQSL*GSQEQV
Trigger: CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGC...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR TCA 72 bp TCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTaGCAACACCACGTGGCTGGGTCAACATGCACCACA +
Preference number: 3 (lower is better)
Translates to: SSAPGLLPMLFA*QHHVAGSTCTT
Trigger: TGTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 72 bp TTCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTaGAGAGTCTGTTGGGGAGCCAAGAACAGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: FFQTSQEPPMVQ*RVCWGAKNRWL
Trigger: CAGCCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 72 bp CAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTaGTTGACAACACCACGTGGCTGGGTCAACATGCAC +
Preference number: 3 (lower is better)
Translates to: QVLSSRSPADAV*LTTPRGWVNMH
Trigger: GTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CCA 72 bp CCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTaGGTCAACATGCACCACATGGAGAGCTTGGCACCT +
Preference number: 3 (lower is better)
Translates to: PADAVCLTTPRG*VNMHHMESLAP
Trigger: AGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CCA 72 bp GTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTaGCTGGGTCAACATGCACCACATGGAGAGCTTGGC +
Preference number: 3 (lower is better)
Translates to: VSCRCCLLDNTT*LGQHAPHGELG
Trigger: GCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CAA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCGCAGTGCAGAGTCTGTaGGGGAGCCAAGAACAGGTG +
Preference number: 3 (lower is better)
Translates to: PPTLGITSLPETWVGTQIAVQSL*GSQEQV
Trigger: CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGC...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CAA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCTGCCGATGCTGTTaGCTTGACAACACCACGTGG +
Preference number: 3 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRSCRCC*LDNTTW
Trigger: CCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGA...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 72 bp GTTTCTTCTTCCAAACATCCCAGGAGCCTCCCATGGTaGAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGT +
Preference number: 3 (lower is better)
Translates to: VSSSKHPRSLPW*SAESVGEPRTG
Trigger: ACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGAAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 72 bp TCATGGCTGTGTGTGCACCCTCAGTTGGCTTTAGTTTaGTCTAAGAACGAGGTAGGAGGTGGGGATGCCTGG +
Preference number: 3 (lower is better)
Translates to: SWLCVHPQLALV*SKNEVGGGDAW
Trigger: CCAGGCATCCCCACCTCCTACCTCGTTCTTAGAGCAAACTAAAGCCAACTGAGGGTGCACACACAGCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR GCA 72 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTaGAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: IYSISSPRNGIQ*RQGQVLSSRSP
Trigger: AGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CAA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGGCCGATGCTGTTTGCTaGACAACACCACGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRADAVC*TTPRGW
Trigger: CCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGC...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CAA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCGCAGTGCAGAGTCTGTaGGGGAGCCAAGAACAGGTG +
Preference number: 3 (lower is better)
Translates to: THYHENSKGEIHPHDPITAVQSL*GSQEQV
Trigger: CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGC...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CCA 72 bp TCAAAACCAAATATACAGCATTTCGTCACCAAGGAATaGCATACAGTGCAGGCAGGGCCAAGTCCTCAGCTC +
Preference number: 3 (lower is better)
Translates to: SKPNIQHFVTKE*HTVQAGPSPQL
Trigger: GAGCTGAGGACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CCA 72 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTaGGGATACAGATACAATCCATATCAGGGGCCACTT +
Preference number: 3 (lower is better)
Translates to: VGTQIQFYLRFG*GYRYNPYQGPL
Trigger: AAGTGGCCCCTGATATGGATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CCA 72 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTaGGTGGGGACACAGATCCAATTCTACCTGAGATTT +
Preference number: 3 (lower is better)
Translates to: PPTLGITSLPET*VGTQIQFYLRF
Trigger: AAATCTCAGGTAGAATTGGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR-3UTR CAA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATTGTGTGCACCCTCAGTaGGCTTTAGTTTGCTCTAAG +
Preference number: 3 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNCVHPQ*ALVCSK
Trigger: CTTAGAGCAAACTAAAGCCAACTGAGGGTGCACACA...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR TCA 72 bp CTGAGACTTGGGTGGGGACACAGATCCAATTCTACCTaGGATTTGGGTGGGGATACAGATACAATCCATATC +
Preference number: 3 (lower is better)
Translates to: LRLGWGHRSNST*DLGGDTDTIHI
Trigger: GATATGGATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCACCCAAGTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTGGCGCCCTGCAGTTCTaGCCAGTCCTCGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAGALQF*PVLGRQ
Trigger: CTGGCGCCCGAGGACTGGGCAGAACTGCAGGGCGCC...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGAGGGCCGCCTCGGGCTaGCTGGCGAAGCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: PGASHGAVQSLLGSQEQVRAASG*LAKPST
Trigger: CGTGGAGGGCTTCGCCAGCCAGCCCGAGGCGGCCCT...CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACAGTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGGGGCTGCGGCCCAGGTaGGTGGCGTGGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TVQAGPSPQLQVSCRCCLGLRPR*VAWMRR
Trigger: CCTGCGCATCCACGCCACCCACCTGGGCCGCAGCCC...CAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTGCTGCAGGAGCGCCTTaGGCCCGGAGCCGATGCGCG +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGAAGAP*ARSRCA
Trigger: CGCGCATCGGCTCCGGGCTCAAGGCGCTCCTGCAGC...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTGGGAATCCGGGCATCTaGTGCACCCCCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAGNPGI*CTPSRA
Trigger: TGCCCTGGAGGGGGTGCAGCAGATGCCCGGATTCCC...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGGCGCCCTGCAGTTCTaGCCAGTCCTCGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLGALQF*PVLGRQ
Trigger: CTGGCGCCCGAGGACTGGGCAGAACTGCAGGGCGCC...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGCCACGCGCTGGTAGATaGCACCAAGGTCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRPRAGR*HQGPGR
Trigger: GCGGCCTGGACCTTGGTGCCATCTACCAGCGCGTGG...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCACCGCCTCGGGCTGGCTaGCGAAGCCCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPPPRAG*RSPPRA
Trigger: AGCGCGTGGAGGGCTTCGCCAGCCAGCCCGAGGCGG...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTAGGGCCGCCTCGGGCTaGCTGGCGAAGCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGRAASG*LAKPST
Trigger: CGTGGAGGGCTTCGCCAGCCAGCCCGAGGCGGCCCT...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCCCAGGTGGGTGGCGTaGATGCGCAGGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGPRWVA*MRRAAS
Trigger: CGAGGCGGCCCTGCGCATCCACGCCACCCACCTGGG...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGGCTGCGGCCCAGGTaGGTGGCGTGGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPGLRPR*VAWMRR
Trigger: CCTGCGCATCCACGCCACCCACCTGGGCCGCAGCCC...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTACGTTCTCTGCGCGCTaGAAGTCCTGGGCACGCGGC +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGATFSAR*KSWARG
Trigger: GCCGCGTGCCCAGGACTTCCAGCGCGCAGAGAACGT...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR TCA 90 bp CCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGAGGCTGTCCAGGCGATaGCCCTGCAGGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGASHGAVQSLLGSQEQVRLSRR*PCREPS
Trigger: GCTGGGCTCCCTGCAGGGTCATCGCCTGGACAGCCT...CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGCCAAGAACAGGTGGCTaGGACCAGGTGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRPRTGG*DQVAQL
Trigger: GAGCTGGGCCACCTGGTCTCAGCCACCTGTTCTTGG...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGGAGCCTCCCATGGGGTGGGTGGCGTGGATaGGCAGGGCCGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PLKEKPVSSSKHPRSLPWGGWRG*AGPPRA
Trigger: AGCCCGAGGCGGCCCTGCGCATCCACGCCACCCACC...CCATGGGAGGCTCCTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGGAGCAGCACGTTCTCTaGGCGCTGGAAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGREQHVL*ALEVLG
Trigger: GCCCAGGACTTCCAGCGCGCAGAGAACGTGCTGCTC...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTTCCAGAGCTGGGCGCTaGCCGGCACCAGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGSRAGR*PAPGPP
Trigger: GGGTGGACCTGGTGCCGGCCAGCGCCCAGCTCTGGA...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACTGCGGGTGGAGGAAGTaGGGCAGCTTCCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDCGWRK*GSFRVA
Trigger: GGCCACGCGGAAGCTGCCCCACTTCCTCCACCCGCA...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGGAGCCTCCCATGGCCCAGGTGGGTGGCGTaGATGCGCAGGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: PLKEKPVSSSKHPRSLPWPRWVA*MRRAAS
Trigger: CGAGGCGGCCCTGCGCATCCACGCCACCCACCTGGG...CCATGGGAGGCTCCTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGGAGCCTCCCATGGTGCGGCCCAGGTGGGTaGCGTGGATGCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PLKEKPVSSSKHPRSLPWCGPGG*RGCAGP
Trigger: CGGCCCTGCGCATCCACGCCACCCACCTGGGCCGCA...CCATGGGAGGCTCCTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTGGGCAGGTGGGCTCATaGCTGTGTGTGCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAGQVGS*LCVHPQ
Trigger: CTGAGGGTGCACACACAGCCATGAGCCCACCTGCCC...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGGCACCACGTGGAAGCTaGTTGTTCTCCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRAPRGS*LFSSRW
Trigger: CCAGCGGCTGGAGAACAATCAGCTTCCACGTGGTGC...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTGCACCACGTGGAAGCTaGTTGTTCTCCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAAPRGS*LFSSRW
Trigger: CCAGCGGCTGGAGAACAATCAGCTTCCACGTGGTGC...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTGGTCCACCCCTTGGCTaGGGATCCTTCTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAGPPLG*GSFSSC
Trigger: GCAGCTTGAGAAGGATCCTCAGCCAAGGGGTGGACC...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGCCCCCAGCAGCCTCGTaGGCAGGTAGTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGASHGAVQSLLGSQEQVPPAAS*AGSQWR
Trigger: CCTCCACTGACTACCTGCTCACGAGGCTGCTGGGGG...CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGGCTGCAGGAGCGCCTTaGGCCCGGAGCCGATGCGCG +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWEAAGAP*ARSRCA
Trigger: CGCGCATCGGCTCCGGGCTCAAGGCGCTCCTGCAGC...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp GTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAACATGCAGCTGCAGGAGCGCCTTaGGCCCGGAGCCGATGCGCG +
Preference number: 4 (lower is better)
Translates to: VSCRCCLLDNTTWLGQHAAAGAP*ARSRCA
Trigger: CGCGCATCGGCTCCGGGCTCAAGGCGCTCCTGCAGC...TGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACAATCCGGGCATCTGCTaGACCCCCTCCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDNPGIC*TPSRAG
Trigger: GCCTGCCCTGGAGGGGGTGCAGCAGATGCCCGGATT...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCGGTACACGGCGCCCTaGAGTTCTGCCCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDRYTAP*SSAQSS
Trigger: CGAGGACTGGGCAGAACTGCAGGGCGCCGTGTACCG...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAACATGCAGGTGGGTGGCGTGGATaGGCAGGGCCGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VSCRCCLLDNTTWLGQHAGGWRG*AGPPRA
Trigger: AGCCCGAGGCGGCCCTGCGCATCCACGCCACCCACC...TGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTTCACTGGCTGGCAGCTaGAGGAGCGCCTTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLSLAGS*RSALSP
Trigger: CGGGCTCAAGGCGCTCCTGCAGCTGCCAGCCAGTGA...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACTCACTGGCTGGCAGCTaGAGGAGCGCCTTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDSLAGS*RSALSP
Trigger: CGGGCTCAAGGCGCTCCTGCAGCTGCCAGCCAGTGA...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACGCTCCTCCCTCAGGCTaGCCGCGTTCAGCGAACCTG +
Preference number: 4 (lower is better)
Translates to: QAGPSPQLQVSCRCCLLDAPPSG*PRSANL
Trigger: CAGGTTCGCTGAACGCGGCCAGCCTGAGGGAGGAGC...GTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGTCCAGAGCTGGGCGCTaGCCGGCACCAGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGESRAGR*PAPGPP
Trigger: GGGTGGACCTGGTGCCGGCCAGCGCCCAGCTCTGGA...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACGGGGCAGCTTCCGCGTaGCCAGGCAACAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDGAASA*PGNRAA
Trigger: TGCTGCTCTGTTGCCTGGCCACGCGGAAGCTGCCCC...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACCCACGCGCTGGTAGATaGCACCAAGGTCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: QAGPSPQLQVSCRCCLLDPRAGR*HQGPGR
Trigger: GCGGCCTGGACCTTGGTGCCATCTACCAGCGCGTGG...GTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCAGGGCCGCCTCGGGCTaGCTGGCGAAGCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEARAASG*LAKPST
Trigger: CGTGGAGGGCTTCGCCAGCCAGCCCGAGGCGGCCCT...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTATGCCTGCCCAATGGTaGCAGTCCTCGGCACAACTG +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAMPAQW*QSSAQL
Trigger: CAGTTGTGCCGAGGACTGTCACCATTGGGCAGGCAT...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS-3UTR TCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTCCGATGCTGTTTGCTTaGCAACACCACGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAPMLFA*QHHVAG
Trigger: CCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGG...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGCCGATGCTGTTTGCTTaGCAACACCACGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRPMLFA*QHHVAG
Trigger: CCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGG...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTAGGAGCTGGCCACCATaGCTGCCCAATGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGARSWPP*LPNGDS
Trigger: ACTGTCACCATTGGGCAGGCATGGTGGCCAGCTCCT...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS-3UTR GCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGGAATCCGGGCATCTaGTGCACCCCCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPGNPGI*CTPSRA
Trigger: TGCCCTGGAGGGGGTGCAGCAGATGCCCGGATTCCC...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAAGGTCCAGGCCGCTaGCCTGCAGCAGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGQGPGR*PAAGCA
Trigger: AGCGCAACCTGCTGCAGGGCAGCGGCCTGGACCTTG...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCACAAGGTCCAGGCCGCTaGCCTGCAGCAGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPQGPGR*PAAGCA
Trigger: AGCGCAACCTGCTGCAGGGCAGCGGCCTGGACCTTG...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGCGGGGGTCCAGGGCATaGACGCGCTCCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWERGSRA*TRSSTV
Trigger: CACGGTGCTGGAGCGCGTGCATGCCCTGGACCCCCG...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTGCTCCTCCCTCAGGCTaGCCGCGTTCAGCGAACCTG +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGAPPSG*PRSANL
Trigger: CAGGTTCGCTGAACGCGGCCAGCCTGAGGGAGGAGC...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACAGTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGAGGTTGCGCTGCGGGTaGAGGAAGTGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TVQAGPSPQLQVSCRCCLRLRCG*RKWGSF
Trigger: GAAGCTGCCCCACTTCCTCCACCCGCAGCGCAACCT...CAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCCGCCTCGGGCTGGCTaGCGAAGCCCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQIPPRAG*RSPPRA
Trigger: AGCGCGTGGAGGGCTTCGCCAGCCAGCCCGAGGCGG...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCGGGCTGCGGCCCAGGTaGGTGGCGTGGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQIGLRPR*VAWMRR
Trigger: CCTGCGCATCCACGCCACCCACCTGGGCCGCAGCCC...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACGGGCAGGTGGGCTCATaGCTGTGTGTGCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDGQVGS*LCVHPQ
Trigger: CTGAGGGTGCACACACAGCCATGAGCCCACCTGCCC...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTACCAGCAAGGACAGGTaGAGCTGCTCCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLTSKDR*SCSSLR
Trigger: CCTGAGGGAGGAGCAGCTCCACCTGTCCTTGCTGGT...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTTCACGCCAGCTCTCGTaGTTGACCCGGTCGAGGATG +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLSRQLS*LTRSRM
Trigger: CATCCTCGACCGGGTCAACCACGAGAGCTGGCGTGA...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAACATGCATGCGGGTGGAGGAAGTaGGGCAGCTTCCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: VSCRCCLLDNTTWLGQHACGWRK*GSFRVA
Trigger: GGCCACGCGGAAGCTGCCCCACTTCCTCCACCCGCA...TGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTAGTGGGGTCACTGGCTaGCAGCTGCAGGAGCGCCTT +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGSGVTG*QLQERL
Trigger: AAGGCGCTCCTGCAGCTGCCAGCCAGTGACCCCACT...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTCGCCTCCCAGAGTCCTaGTCTTCTGGAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGARLPES*SSGRCS
Trigger: AGAGCATCTTCCAGAAGACCAGGACTCTGGGAGGCG...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTGCTTGCAGTGTACGATaGCTGCTACCAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAACSVR*LLPAGP
Trigger: AGGACCTGCTGGTAGCAGCCATCGTACACTGCAAGC...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR TCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCAGGCTGTCCAGGCGATaGCCCTGCAGGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSRLSRR*PCREPS
Trigger: GCTGGGCTCCCTGCAGGGTCATCGCCTGGACAGCCT...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGGCCAGCTCTCGTGGTTaGCCCGGTCGAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGEASSRG*PGRGWR
Trigger: TCTCCATCCTCGACCGGGTCAACCACGAGAGCTGGC...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGGCTaGGACCAGGTGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGEPRTGG*DQVAQL
Trigger: GAGCTGGGCCACCTGGTCTCAGCCACCTGTTCTTGG...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGGGGAATCCGGGCATCTaGTGCACCCCCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWEGNPGI*CTPSRA
Trigger: TGCCCTGGAGGGGGTGCAGCAGATGCCCGGATTCCC...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAACATGCACGGTACACGGCGCCCTaGAGTTCTGCCCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VSCRCCLLDNTTWLGQHARYTAP*SSAQSS
Trigger: CGAGGACTGGGCAGAACTGCAGGGCGCCGTGTACCG...TGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGCGGTACACGGCGCCCTaGAGTTCTGCCCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWERYTAP*SSAQSS
Trigger: CGAGGACTGGGCAGAACTGCAGGGCGCCGTGTACCG...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGTGCCCTGCAGCAGGTTaGGCTGCGGGTGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGECPAAG*AAGGGS
Trigger: ACTTCCTCCACCCGCAGCGCAACCTGCTGCAGGGCA...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGCAGGTCTCCTGCCGATaGTGTTTGCTTGACAACACC +
Preference number: 4 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRQVSCR*CLLDNT
Trigger: GGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTG...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTAGCCAAGTGAGGAGCTaGCCACCATGCCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLSQVRS*PPCLPN
Trigger: ATTGGGCAGGCATGGTGGCCAGCTCCTCACTTGGCT...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS-3UTR CCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGGGGGCAGCTTCCGCGTaGCCAGGCAACAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWEGAASA*PGNRAA
Trigger: TGCTGCTCTGTTGCCTGGCCACGCGGAAGCTGCCCC...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCGGGGCAGCTTCCGCGTaGCCAGGCAACAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEAGAASA*PGNRAA
Trigger: TGCTGCTCTGTTGCCTGGCCACGCGGAAGCTGCCCC...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAACCGCCTCGGGCTGGCTaGCGAAGCCCTCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQPPRAG*RSPPRA
Trigger: AGCGCGTGGAGGGCTTCGCCAGCCAGCCCGAGGCGG...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCTGCGGCCCAGGTGGGTaGCGTGGATGCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRACGPGG*RGCAGP
Trigger: CGGCCCTGCGCATCCACGCCACCCACCTGGGCCGCA...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCACAGTGGCCCAGTAAGTaGGGTCACTGGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPQWPSK*GHWLAA
Trigger: AGCTGCCAGCCAGTGACCCCACTTACTGGGCCACTG...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGACCACATGGAGAGCTTaGCACCTGCATCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PGASHGAVQSLLGSQEQVTTWRA*HLHPGP
Trigger: AGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGT...CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTACCACATGGAGAGCTTaGCACCTGCATCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLTTWRA*HLHPGP
Trigger: AGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGT...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGCTTGACAACACCACGTaGCTGGGTCAACATGCACCA +
Preference number: 4 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRLDNTT*LGQHAP
Trigger: TGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAG...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCCAATCACCTCCCACTaGGCCCCTCCTCCAACACTG +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGPITSH*APPPTL
Trigger: CAGTGTTGGAGGAGGGGCCCAGTGGGAGGTGATTGG...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGGCCAGCTCTCGTGGTTaGCCCGGTCGAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWEASSRG*PGRGWR
Trigger: TCTCCATCCTCGACCGGGTCAACCACGAGAGCTGGC...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCGCCAGCTCTCGTGGTTaGCCCGGTCGAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEAASSRG*PGRGWR
Trigger: TCTCCATCCTCGACCGGGTCAACCACGAGAGCTGGC...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCCCTCCGAGGAGGCAGTaGAGGTATCCTCGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEAPPRRQ*RYPRWS
Trigger: GGACCACCGAGGATACCTTCACTGCCTCCTCGGAGG...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR GCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCAATCCGGGCATCTGCTaGACCCCCTCCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQINPGIC*TPSRAG
Trigger: GCCTGCCCTGGAGGGGGTGCAGCAGATGCCCGGATT...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGATCCTTCTCAAGCTaGCCTCAGGGAATCCGGGCA +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPGSFSS*PQGIRA
Trigger: TGCCCGGATTCCCTGAGGGCAGCTTGAGAAGGATCC...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTGCCCTGCAGCAGGTTaGGCTGCGGGTGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWECPAAG*AAGGGS
Trigger: ACTTCCTCCACCCGCAGCGCAACCTGCTGCAGGGCA...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCACTGGCTGGCAGCTaGAGGAGCGCCTTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRSLAGS*RSALSP
Trigger: CGGGCTCAAGGCGCTCCTGCAGCTGCCAGCCAGTGA...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACACTCTCAGAGGCCACTaGTGGGGACAAAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: QAGPSPQLQVSCRCCLLDTLRGH*WGQNPS
Trigger: GGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAGAGT...GTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACGTGGCTGGGTCAACATaGACCACATGGAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QAGPSPQLQVSCRCCLLDVAGST*TTWRAW
Trigger: CCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCAC...GTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCTGCCGATGCTGTTTaGTTGACAACACCACGTGGC +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDPADAV*LTTPRG
Trigger: GCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGG...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACAGGAATGGCATACAGTaGAGGCAGGGCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDRNGIQ*RQGQVL
Trigger: GAGGACTTGGCCCTGCCTGCACTGTATGCCATTCCT...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGAGGAATGGCATACAGTaGAGGCAGGGCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGASHGAVQSLLGSQEQVRNGIQ*RQGQVL
Trigger: GAGGACTTGGCCCTGCCTGCACTGTATGCCATTCCT...CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCTGCCACAGGGGCACCTaGACGGCCATGGCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSCHRGT*TAMAEV
Trigger: CACCTCAGCCATGGCCGTGCAGGTGCCCCTGTGGCA...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR GCA 90 bp CCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGGGACACACAGGACCTTaGTGGGCACAATGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PGASHGAVQSLLGSQEQVGHTGP*WAQCVH
Trigger: GTGGACACATTGTGCCCAGCAAGGTCCTGTGTGTCC...CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTTTGTTCTCCAGCCGCTaGACACCAGCAAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLLFSSR*TPARTG
Trigger: ACCTGTCCTTGCTGGTGTCCAGCGGCTGGAGAACAA...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTACCACGGGCACCACGTaGAAGCTGATTGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLTTGTT*KLIVLQ
Trigger: CTGGAGAACAATCAGCTTCCACGTGGTGCCCGTGGT...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACACCAGGTCCACCCCTTaGCTGAGGATCCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDTRSTP*LRILLK
Trigger: CTTGAGAAGGATCCTCAGCCAAGGGGTGGACCTGGT...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAACATGCAAGGTTGCGCTGCGGGTaGAGGAAGTGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VSCRCCLLDNTTWLGQHARLRCG*RKWGSF
Trigger: GAAGCTGCCCCACTTCCTCCACCCGCAGCGCAACCT...TGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGAGTAAGTGGGGTCACTaGCTGGCAGCTGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGESKWGH*LAAAGA
Trigger: CGCTCCTGCAGCTGCCAGCCAGTGACCCCACTTACT...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCAGTGGCCCAGTAAGTaGGGTCACTGGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGEQWPSK*GHWLAA
Trigger: AGCTGCCAGCCAGTGACCCCACTTACTGGGCCACTG...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTTGGATGTTGAAGACCTaGAACTTGTCCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAWMLKT*NLSSRT
Trigger: CGTCCTGCTGGACAAGTTCCAGGTCTTCAACATCCA...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTGGAAGATGCTCTGCATaGCAGAGATCCGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAGRCSA*QRSGPY
Trigger: ATAAGGACCGGATCTCTGCCATGCAGAGCATCTTCC...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAACCACATGGAGAGCTTaGCACCTGCATCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPTTWRA*HLHPGP
Trigger: AGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGT...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGGGTCCACCCCTTGGCTaGGGATCCTTCTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWEGPPLG*GSFSSC
Trigger: GCAGCTTGAGAAGGATCCTCAGCCAAGGGGTGGACC...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCCCAAGAACAGGTGGCTaGGACCAGGTGGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSPRTGG*DQVAQL
Trigger: GAGCTGGGCCACCTGGTCTCAGCCACCTGTTCTTGG...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATGTGCAGATGGGCTGTaGGGAGGCACCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRCADGL*GGTCPG
Trigger: ACCTGGGCAGGTGCCTCCTCACAGCCCATCTGCACA...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR GCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGAAGGACAGGTGGAGCTaGTCCTCCCTCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQKDRWS*SSLRLA
Trigger: GGCCAGCCTGAGGGAGGAGCAGCTCCACCTGTCCTT...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAGGTGGGTGGCGTGGATaGGCAGGGCCGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPGGWRG*AGPPRA
Trigger: AGCCCGAGGCGGCCCTGCGCATCCACGCCACCCACC...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGAGGAGCCTCCCATGGTaGAGTGCAGAGTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGERSLPW*SAESVG
Trigger: CCCAACAGACTCTGCACTGCACCATGGGAGGCTCCT...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGGGAGAGCTTGGCACCTaGATCCAGGCCCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQGELGT*IQALTQ
Trigger: CTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCC...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCATTGTTCTCCAGCCGCTaGACACCAGCAAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPLFSSR*TPARTG
Trigger: ACCTGTCCTTGCTGGTGTCCAGCGGCTGGAGAACAA...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCTCACGCCAGCTCTCGTaGTTGACCCGGTCGAGGATG +
Preference number: 4 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEASRQLS*LTRSRM
Trigger: CATCCTCGACCGGGTCAACCACGAGAGCTGGCGTGA...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTCACGCCAGCTCTCGTaGTTGACCCGGTCGAGGATG +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWESRQLS*LTRSRM
Trigger: CATCCTCGACCGGGTCAACCACGAGAGCTGGCGTGA...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGAGTCAGGCCGTCAGTCTaGCCACTGTCACGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRVRPSV*PLSRQL
Trigger: GAGCTGGCGTGACAGTGGCCAGACTGACGGCCTGAC...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATCCCAGGTGGGTGGCGTaGATGCGCAGGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNPRWVA*MRRAAS
Trigger: CGAGGCGGCCCTGCGCATCCACGCCACCCACCTGGG...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATTGCGGCCCAGGTGGGTaGCGTGGATGCGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNCGPGG*RGCAGP
Trigger: CGGCCCTGCGCATCCACGCCACCCACCTGGGCCGCA...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCAGTGGGGTCACTGGCTaGCAGCTGCAGGAGCGCCTT +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQISGVTG*QLQERL
Trigger: AAGGCGCTCCTGCAGCTGCCAGCCAGTGACCCCACT...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGGAGCCTCCCATGGCGTCGAAGTAGGCAGTaGCCCAGTAAGTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PLKEKPVSSSKHPRSLPWRRSRQ*PSKWGH
Trigger: GTGACCCCACTTACTGGGCCACTGCCTACTTCGACG...CCATGGGAGGCTCCTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCTTGACAACACCACGTaGCTGGGTCAACATGCACCA +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDLDNTT*LGQHAP
Trigger: TGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAG...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGTTCGTCACCAAGGAATaGCATACAGTGCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGASHGAVQSLLGSQEQVFVTKE*HTVQAG
Trigger: CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAA...CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGGGGCAGGTGGGCTCATaGCTGTGTGTGCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQGQVGS*LCVHPQ
Trigger: CTGAGGGTGCACACACAGCCATGAGCCCACCTGCCC...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTTACCTGAGACTTGGGTaGGGACACAGATCCAATTCT +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAYLRLG*GHRSNS
Trigger: AGAATTGGATCTGTGTCCCCACCCAAGTCTCAGGTA...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACCCAGGGAGGAGGTGCTGAGGCATATCTTACATaGCCGGAGAAAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PHGELGTCIQALTQGGGAEAYLT*PEKEEE
Trigger: CTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTC...AGCACCTCCTCCCTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
3UTR CAA 72 bp GTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTaGACAACACCACGTGGCTGGGTCAACATGCACCAC +
Preference number: 4 (lower is better)
Translates to: VLSSRSPADAVC*TTPRGWVNMHH
Trigger: GTGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGAGCACCACGTGGAAGCTaGTTGTTCTCCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRAPRGS*LFSSRW
Trigger: CCAGCGGCTGGAGAACAATCAGCTTCCACGTGGTGC...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCCCCCCAGCAGCCTCGTaGGCAGGTAGTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRAPPAAS*AGSQWR
Trigger: CCTCCACTGACTACCTGCTCACGAGGCTGCTGGGGG...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCCCCCCAGCAGCCTCGTaGGCAGGTAGTCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVPPAAS*AGSQWR
Trigger: CCTCCACTGACTACCTGCTCACGAGGCTGCTGGGGG...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGTGCCCCACCAGGCACTaGAAGACTCTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQCPTRH*KTLRGH
Trigger: GTGGCCTCTGAGAGTCTTTCAGTGCCTGGTGGGGCA...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGCCGATGCTGTTTGCTTaGCAACACCACGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWEPMLFA*QHHVAG
Trigger: CCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGG...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGAGATCCAATTCTACCTaGGATTTGGGTGGGGATACA +
Preference number: 4 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRRSNST*DLGGDT
Trigger: TGTATCCCCACCCAAATCTCAGGTAGAATTGGATCT...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGCTGCTGGCCCCCACCTaGAGGCTGCAGCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRLLAPT*RLQLPN
Trigger: GTTGGGGAGCTGCAGCCTGCAGGTGGGGGCCAGCAG...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307486.12
CDS-3UTR GCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCCGCGTTCAGCGAACCTaGAGCCCTCTCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRARVQRT*SPLCWP
Trigger: GGGCCAGCAGAGAGGGCTGCAGGTTCGCTGAACGCG...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307486.12
CDS-3UTR GCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATGGCGCCCTGCAGTTCTaGCCAGTCCTCGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNGALQF*PVLGRQ
Trigger: CTGGCGCCCGAGGACTGGGCAGAACTGCAGGGCGCC...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCATTCTGGAAGATGCTCTaGATGGCAGAGATCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPFWKML*MAEIRS
Trigger: GGACCGGATCTCTGCCATGCAGAGCATCTTCCAGAA...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACTGGTCTTCTGGAAGATaGTCTGCATGGCAGAGATCC +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDWSSGR*SAWQRS
Trigger: GGATCTCTGCCATGCAGAGCATCTTCCAGAAGACCA...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCACCAGCAAGGACAGGTaGAGCTGCTCCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQITSKDR*SCSSLR
Trigger: CCTGAGGGAGGAGCAGCTCCACCTGTCCTTGCTGGT...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGACCAGCAAGGACAGGTaGAGCTGCTCCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQTSKDR*SCSSLR
Trigger: CCTGAGGGAGGAGCAGCTCCACCTGTCCTTGCTGGT...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCTCCAGAGCTGGGCGCTaGCCGGCACCAGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: THYHENSKGEIHPHDPITSRAGR*PAPGPP
Trigger: GGGTGGACCTGGTGCCGGCCAGCGCCCAGCTCTGGA...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAACCACGCGCTGGTAGATaGCACCAAGGTCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQPRAGR*HQGPGR
Trigger: GCGGCCTGGACCTTGGTGCCATCTACCAGCGCGTGG...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGAGTAAGTGGGGTCACTaGCTGGCAGCTGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQSKWGH*LAAAGA
Trigger: CGCTCCTGCAGCTGCCAGCCAGTGACCCCACTTACT...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTAGAGTCCTGGTCTTCTaGAAGATGCTCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLRVLVF*KMLCMA
Trigger: TGCCATGCAGAGCATCTTCCAGAAGACCAGGACTCT...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAGAGTCCTGGTCTTCTaGAAGATGCTCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: QAGPSPQLQVSCRCCLLDRVLVF*KMLCMA
Trigger: TGCCATGCAGAGCATCTTCCAGAAGACCAGGACTCT...GTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCAGTGCAGAGTCTGTTaGGGAGCCAAGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGEQCRVC*GAKNRW
Trigger: CCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTG...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACTCAACATGCACCACATaGAGAGCTTGGCACCTGCAT +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDSTCTT*RAWHLH
Trigger: ATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGA...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTTTCGTCACCAAGGAATaGCATACAGTGCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGFVTKE*HTVQAG
Trigger: CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAA...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGGAGCGCAGGGCGAACTaGAAGGCCTCCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRERRAN*KASRPR
Trigger: CCGTGGCCTGGAGGCCTTCCAGTTCGCCCTGCGCTC...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGCATCCTCCGGCTGGGTaGCCTCTGGTTCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWEHPPAG*PLVPQS
Trigger: TGATTGAGGAACCAGAGGCCACCCAGCCGGAGGATG...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388934.5
3UTR CAA 72 bp CCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTaGCTTGACAACACCACGTGGCTGGGTCAACATGCA +
Preference number: 4 (lower is better)
Translates to: PSPQLQVSCRCC*LDNTTWLGQHA
Trigger: TGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCAGGCTGTCCAGGCGATaGCCCTGCAGGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: THYHENSKGEIHPHDPITRLSRR*PCREPS
Trigger: GCTGGGCTCCCTGCAGGGTCATCGCCTGGACAGCCT...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTGATTACAAGTCTACCTaGGACTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGDYKST*DLGGDT
Trigger: TGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATC...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGGAGGCCTCAGGAAACTaGCAATCATGGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGEEASGN*QSWWKV
Trigger: CACCTTCCACCATGATTGTCAGTTTCCTGAGGCCTC...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCGGGAGTAGTCCACGATaGAGCGGGGGTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVGSSPR*SGGPGH
Trigger: ATGCCCTGGACCCCCGCTTCATCGTGGACTACTCCC...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR GCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCAGGAGCTGGCCACCATaGCTGCCCAATGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQIRSWPP*LPNGDS
Trigger: ACTGTCACCATTGGGCAGGCATGGTGGCCAGCTCCT...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS-3UTR GCA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGTTCTGGAAGATGCTCTaGATGGCAGAGATCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SSKHPRSLPWCSAESVGEFWKML*MAEIRS
Trigger: GGACCGGATCTCTGCCATGCAGAGCATCTTCCAGAA...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGAGGAGCCTCCCATGGTaGAGTGCAGAGTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQRSLPW*SAESVG
Trigger: CCCAACAGACTCTGCACTGCACCATGGGAGGCTCCT...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCGGAGAGCTTGGCACCTaGATCCAGGCCCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVGELGT*IQALTQ
Trigger: CTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCC...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAGGAGAGCTTGGCACCTaGATCCAGGCCCTGACCCAG +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQGELGT*IQALTQ
Trigger: CTGGGTCAGGGCCTGGATGCAGGTGCCAAGCTCTCC...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ACAGTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGGGACAGTACCCTTTCTaGTGTGTATACCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: TVQAGPSPQLQVSCRCCLGQYPF*CVYPAH
Trigger: ATGTGCTGGGTATACACAGCAGAAAGGGTACTGTCC...CAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGGCTCCTCCCTCAGGCTaGCCGCGTTCAGCGAACCTG +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRAPPSG*PRSANL
Trigger: CAGGTTCGCTGAACGCGGCCAGCCTGAGGGAGGAGC...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCGTCAGGCCGTCAGTCTaGCCACTGTCACGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRAVRPSV*PLSRQL
Trigger: GAGCTGGCGTGACAGTGGCCAGACTGACGGCCTGAC...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCTGCGGGTGGAGGAAGTaGGGCAGCTTCCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: THYHENSKGEIHPHDPITCGWRK*GSFRVA
Trigger: GGCCACGCGGAAGCTGCCCCACTTCCTCCACCCGCA...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGACGTCGAAGTAGGCAGTaGCCCAGTAAGTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRRRSRQ*PSKWGH
Trigger: GTGACCCCACTTACTGGGCCACTGCCTACTTCGACG...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCCGTCGAAGTAGGCAGTaGCCCAGTAAGTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSRRSRQ*PSKWGH
Trigger: GTGACCCCACTTACTGGGCCACTGCCTACTTCGACG...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCATGGATGTTGAAGACCTaGAACTTGTCCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPWMLKT*NLSSRT
Trigger: CGTCCTGCTGGACAAGTTCCAGGTCTTCAACATCCA...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGATCCGGTCCTTATCCTaGATGTTGAAGACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PGASHGAVQSLLGSQEQVIRSLS*MLKTWN
Trigger: GTTCCAGGTCTTCAACATCCAGGATAAGGACCGGAT...CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGAAGATGCTCTGCATaGCAGAGATCCGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPGRCSA*QRSGPY
Trigger: ATAAGGACCGGATCTCTGCCATGCAGAGCATCTTCC...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGCAGTGCAGAGTCTGTTaGGGAGCCAAGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWEQCRVC*GAKNRW
Trigger: CCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTG...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGCTCAGAGGCCACTGCTaGGGACAAAATCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWELRGHC*GQNPST
Trigger: AGTGGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAG...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGAGGCATATCTTACATaGCCGGAGAAAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLEAYLT*PEKEEE
Trigger: CTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTC...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCTGTGTCCACGGCACTTaGCGTCACCCTCCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRACVHGT*RHPPRR
Trigger: CCTCCTCGGAGGGTGACGCCAAGTGCCGTGGACACA...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR TCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCGGTCCACCCCTTGGCTaGGGATCCTTCTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVGPPLG*GSFSSC
Trigger: GCAGCTTGAGAAGGATCCTCAGCCAAGGGGTGGACC...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTAATCATGGTGGAAGGTaGAGGAGAAGGAGGCATATC +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGNHGGR*RRRRHI
Trigger: GATATGCCTCCTTCTCCTTCACCTTCCACCATGATT...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp GTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAACATGCAGAGGCCTCAGGAAACTaGCAATCATGGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VSCRCCLLDNTTWLGQHAEASGN*QSWWKV
Trigger: CACCTTCCACCATGATTGTCAGTTTCCTGAGGCCTC...TGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAAATCCGGGCATCTGCTaGACCCCCTCCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPNPGIC*TPSRAG
Trigger: GCCTGCCCTGGAGGGGGTGCAGCAGATGCCCGGATT...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCCAAGGTCCAGGCCGCTaGCCTGCAGCAGGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: THYHENSKGEIHPHDPITQGPGR*PAAGCA
Trigger: AGCGCAACCTGCTGCAGGGCAGCGGCCTGGACCTTG...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGTCCGCAGGCCAGCTGTaGAGATGGGCTGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRSAGQL*RWAVRR
Trigger: CCTCCTCACAGCCCATCTGCACAGCTGGCCTGCGGA...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGACCAGGTCCACCCCTTaGCTGAGGATCCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQTRSTP*LRILLK
Trigger: CTTGAGAAGGATCCTCAGCCAAGGGGTGGACCTGGT...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCACCAGGTCCACCCCTTaGCTGAGGATCCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSTRSTP*LRILLK
Trigger: CTTGAGAAGGATCCTCAGCCAAGGGGTGGACCTGGT...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCGCTATACAGGAAGCATaGCTGGGAGGCCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEAAIQEA*LGGLRK
Trigger: TTTCCTGAGGCCTCCCAGCCATGCTTCCTGTATAGC...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCTGGGCACACCCAGGTaGCATAATTCAAGGCCATCC +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQILGTPR*HNSRPS
Trigger: GGATGGCCTTGAATTATGCCACCTGGGTGTGCCCAG...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR TCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAAGATCCAATTCTACCTaGGATTTGGGTGGGGATACA +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPRSNST*DLGGDT
Trigger: TGTATCCCCACCCAAATCTCAGGTAGAATTGGATCT...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCGCGAACCTGGTGCGATaGGACTGTGGTGCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRAANLVR*DCGACS
Trigger: ACTGCAAGCACCACAGTCTCATCGCACCAGGTTCGC...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR GCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCTGGTCTTCTGGAAGATaGTCTGCATGGCAGAGATCC +
Preference number: 4 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEAWSSGR*SAWQRS
Trigger: GGATCTCTGCCATGCAGAGCATCTTCCAGAAGACCA...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCAGGTCTCCTGCCGATaGTGTTTGCTTGACAACACC +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQIQVSCR*CLLDNT
Trigger: GGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTG...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCGCGATGAGACTGTGGTaGTTGCAGTGTACGATGGCT +
Preference number: 4 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSAMRLW*LQCTMA
Trigger: AGCCATCGTACACTGCAAGCACCACAGTCTCATCGC...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR GCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCGTTCAGCGAACCTGGTaGGATGAGACTGTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQIVQRTW*DETVVL
Trigger: AAGCACCACAGTCTCATCGCACCAGGTTCGCTGAAC...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGGTCAGGCCGTCAGTCTaGCCACTGTCACGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGVRPSV*PLSRQL
Trigger: GAGCTGGCGTGACAGTGGCCAGACTGACGGCCTGAC...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAAGGTTGCGCTGCGGGTaGAGGAAGTGGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPRLRCG*RKWGSF
Trigger: GAAGCTGCCCCACTTCCTCCACCCGCAGCGCAACCT...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGAGTGGGGTCACTGGCTaGCAGCTGCAGGAGCGCCTT +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGSGVTG*QLQERL
Trigger: AAGGCGCTCCTGCAGCTGCCAGCCAGTGACCCCACT...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATACAATCCATATCAGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGGGAAGATGCTCTGCATaGCAGAGATCCGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: IQSISGATSTGTGRSRWEGRCSA*QRSGPY
Trigger: ATAAGGACCGGATCTCTGCCATGCAGAGCATCTTCC...CTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCTGATATGGATTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTTTAATTGACTCACAGTCCCGCAGGCTATACAGGAAGCATGGCTGGGAGGCCAGAGTCCTGGTCTTCTaGAAGATGCTCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GLIDSQSRRLYRKHGWEARVLVF*KMLCMA
Trigger: TGCCATGCAGAGCATCTTCCAGAAGACCAGGACTCT...GGCCTCCCAGCCATGCTTCCTGTATAGCCTGCGGGACTGTGAGTCAATTAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGACAACACCACGTGGCTaGGTCAACATGCACCACATG +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQTTPRG*VNMHHM
Trigger: CATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGT...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACTACCTGAGATTTGGGTaGGGATACAGATACAATCCA +
Preference number: 4 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDYLRFG*GYRYNP
Trigger: TGGATTGTATCTGTATCCCCACCCAAATCTCAGGTA...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGCCAATCACCTCCCACTaGGCCCCTCCTCCAACACTG +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRPITSH*APPPTL
Trigger: CAGTGTTGGAGGAGGGGCCCAGTGGGAGGTGATTGG...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCACAGCAGGTCTGCAGGTaGGGCCTCAGCTCCCACACA +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPQQVCR*GLSSHT
Trigger: TGTGTGGGAGCTGAGGCCCCACCTGCAGACCTGCTG...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAGGCCAGCTGTGCAGATaGGCTGTGAGGAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPGQLCR*AVRRHL
Trigger: CAGGTGCCTCCTCACAGCCCATCTGCACAGCTGGCC...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGGCATCCCTTCAACAGTaGCAGGTGAGGGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRASLQQ*QVRASG
Trigger: GCCACTGGCCCTCACCTGCCACTGTTGAAGGGATGC...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR TCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGTGCCCCACCAGGCACTaGAAGACTCTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGCPTRH*KTLRGH
Trigger: GTGGCCTCTGAGAGTCTTTCAGTGCCTGGTGGGGCA...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCATGCCCCACCAGGCACTaGAAGACTCTCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPCPTRH*KTLRGH
Trigger: GTGGCCTCTGAGAGTCTTTCAGTGCCTGGTGGGGCA...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCGATTACAAGTCTACCTaGGACTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: PPTLGITSLPETWVGTQIDYKST*DLGGDT
Trigger: TGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATC...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGGATTACAAGTCTACCTaGGACTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQDYKST*DLGGDT
Trigger: TGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATC...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAGTGGCTGGGTCAACATaGACCACATGGAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQVAGST*TTWRAW
Trigger: CCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCAC...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAGCAGTGTACGATGGCTaGTACCAGCAGGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQAVYDG*YQQVLE
Trigger: CTCAAGGACCTGCTGGTAGCAGCCATCGTACACTGC...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAACCACGGGCACCACGTaGAAGCTGATTGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQTTGTT*KLIVLQ
Trigger: CTGGAGAACAATCAGCTTCCACGTGGTGCCCGTGGT...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAGCACCATCTTCAGGTaGCCAAAGGTCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQSTIFR*PKVRPS
Trigger: TGACGGCCTGACCTTTGGCCACCTGAAGATGGTGCT...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAAGTAAGTGGGGTCACTaGCTGGCAGCTGCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPSKWGH*LAAAGA
Trigger: CGCTCCTGCAGCTGCCAGCCAGTGACCCCACTTACT...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATCAGTGGCCCAGTAAGTaGGGTCACTGGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNQWPSK*GHWLAA
Trigger: AGCTGCCAGCCAGTGACCCCACTTACTGGGCCACTG...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCTGGATGTTGAAGACCTaGAACTTGTCCAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSWMLKT*NLSSRT
Trigger: CGTCCTGCTGGACAAGTTCCAGGTCTTCAACATCCA...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCCGCCTCCCAGAGTCCTaGTCTTCTGGAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVRLPES*SSGRCS
Trigger: AGAGCATCTTCCAGAAGACCAGGACTCTGGGAGGCG...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAACTCAGAGGCCACTGCTaGGGACAAAATCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQLRGHC*GQNPST
Trigger: AGTGGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAG...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGTCAACATGCACCACATaGAGAGCTTGGCACCTGCAT +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQSTCTT*RAWHLH
Trigger: ATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGA...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCATACCTGAGATTTGGGTaGGGATACAGATACAATCCA +
Preference number: 4 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPYLRFG*GYRYNP
Trigger: TGGATTGTATCTGTATCCCCACCCAAATCTCAGGTA...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGATTCTACCTGAGATTTaGGTGGGGATACAGATACAA +
Preference number: 4 (lower is better)
Translates to: PGASHGAVQSLLGSQEQVILPEI*VGIQIQ
Trigger: TTGTATCTGTATCCCCACCCAAATCTCAGGTAGAAT...CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATCCAATCACCTCCCACTaGGCCCCTCCTCCAACACTG +
Preference number: 4 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNPITSH*APPPTL
Trigger: CAGTGTTGGAGGAGGGGCCCAGTGGGAGGTGATTGG...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGCGCGTTCAGCGAACCTaGTGCGATGAGACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRRVQRT*CDETVV
Trigger: CACCACAGTCTCATCGCACCAGGTTCGCTGAACGCG...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR TCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGATGCCTGCCCAATGGTaGCAGTCCTCGGCACAACTG +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGMPAQW*QSSAQL
Trigger: CAGTTGTGCCGAGGACTGTCACCATTGGGCAGGCAT...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS-3UTR TCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGAATCATGGTGGAAGGTaGAGGAGAAGGAGGCATATC +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQNHGGR*RRRRHI
Trigger: GATATGCCTCCTTCTCCTTCACCTTCCACCATGATT...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGGGATCCTTCTCAAGCTaGCCTCAGGGAATCCGGGCA +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGGSFSS*PQGIRA
Trigger: TGCCCGGATTCCCTGAGGGCAGCTTGAGAAGGATCC...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCTTCTGGAAGATGCTCTaGATGGCAGAGATCCGGTCC +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRAFWKML*MAEIRS
Trigger: GGACCGGATCTCTGCCATGCAGAGCATCTTCCAGAA...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATAGGAGCCTCCCATGGTaGAGTGCAGAGTCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNRSLPW*SAESVG
Trigger: CCCAACAGACTCTGCACTGCACCATGGGAGGCTCCT...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGAGCCAAGTGAGGAGCTaGCCACCATGCCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGSQVRS*PPCLPN
Trigger: ATTGGGCAGGCATGGTGGCCAGCTCCTCACTTGGCT...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS-3UTR CCA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGAATCCGGTCCTTATCCTaGATGTTGAAGACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRIRSLS*MLKTWN
Trigger: GTTCCAGGTCTTCAACATCCAGGATAAGGACCGGAT...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGCTCAGAGGCCACTGCTaGGGACAAAATCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRLRGHC*GQNPST
Trigger: AGTGGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAG...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCACAACACCACGTGGCTaGGTCAACATGCACCACATG +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRATTPRG*VNMHHM
Trigger: CATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGT...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAACTTGACAACACCACGTaGCTGGGTCAACATGCACCA +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQLDNTT*LGQHAP
Trigger: TGGTGCATGTTGACCCAGCCACGTGGTGTTGTCAAG...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTATTCTACCTGAGATTTaGGTGGGGATACAGATACAA +
Preference number: 4 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGILPEI*VGIQIQ
Trigger: TTGTATCTGTATCCCCACCCAAATCTCAGGTAGAAT...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGGAGGCATATCTTACATaGCCGGAGAAAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQEAYLT*PEKEEE
Trigger: CTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTC...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCACCTCCATGTCCATTaGGTCCTCAGAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGHLHVH*VLRGAQ
Trigger: CTGCGCTCCTCTGAGGACCCAATGGACATGGAGGTG...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCACACACAGGACCTTGCTaGGCACAATGTGTCCACGGC +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPHTGPC*AQCVHG
Trigger: GCCGTGGACACATTGTGCCCAGCAAGGTCCTGTGTG...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCGGTGCGATGAGACTGTaGTGCTTGCAGTGTACGATG +
Preference number: 4 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVGAMRL*CLQCTM
Trigger: CATCGTACACTGCAAGCACCACAGTCTCATCGCACC...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR TCA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCAGATCCAATTCTACCTaGGATTTGGGTGGGGATACA +
Preference number: 4 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSRSNST*DLGGDT
Trigger: TGTATCCCCACCCAAATCTCAGGTAGAATTGGATCT...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGATAAAGAGGTTTAATTaGCTCACAGTCCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQIKRFN*LTVPQA
Trigger: AGCCTGCGGGACTGTGAGTCAATTAAACCTCTTTAT...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGAATAAAGAGGTTTAATTaGCTCACAGTCCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRIKRFN*LTVPQA
Trigger: AGCCTGCGGGACTGTGAGTCAATTAAACCTCTTTAT...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCACTCTCAGAGGCCACTaGTGGGGACAAAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: THYHENSKGEIHPHDPITTLRGH*WGQNPS
Trigger: GGAGGGATTTTGTCCCCAGCAGTGGCCTCTGAGAGT...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAGTGGCTGGGTCAACATaGACCACATGGAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPVAGST*TTWRAW
Trigger: CCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCAC...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCACCTGCCGATGCTGTTTaGTTGACAACACCACGTGGC +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPPADAV*LTTPRG
Trigger: GCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGG...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGCAGGTCTCCTGCCGATaGTGTTTGCTTGACAACACC +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRQVSCR*CLLDNT
Trigger: GGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTG...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCACCACGGGCACCACGTaGAAGCTGATTGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: THYHENSKGEIHPHDPITTTGTT*KLIVLQ
Trigger: CTGGAGAACAATCAGCTTCCACGTGGTGCCCGTGGT...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAAGCACCATCTTCAGGTaGCCAAAGGTCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPSTIFR*PKVRPS
Trigger: TGACGGCCTGACCTTTGGCCACCTGAAGATGGTGCT...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCAGCACCATCTTCAGGTaGCCAAAGGTCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: THYHENSKGEIHPHDPITSTIFR*PKVRPS
Trigger: TGACGGCCTGACCTTTGGCCACCTGAAGATGGTGCT...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCCGCCTCCCAGAGTCCTaGTCTTCTGGAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: THYHENSKGEIHPHDPITRLPES*SSGRCS
Trigger: AGAGCATCTTCCAGAAGACCAGGACTCTGGGAGGCG...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCAGTGCAGAGTCTGTTaGGGAGCCAAGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGQCRVC*GAKNRW
Trigger: CCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTG...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGGCTATACAGGAAGCATaGCTGGGAGGCCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRAIQEA*LGGLRK
Trigger: TTTCCTGAGGCCTCCCAGCCATGCTTCCTGTATAGC...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGGAGGCCTCAGGAAACTaGCAATCATGGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGEASGN*QSWWKV
Trigger: CACCTTCCACCATGATTGTCAGTTTCCTGAGGCCTC...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCGGACAGTACCCTTTCTaGTGTGTATACCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVGQYPF*CVYPAH
Trigger: ATGTGCTGGGTATACACAGCAGAAAGGGTACTGTCC...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAACAACACCACGTGGCTaGGTCAACATGCACCACATG +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPTTPRG*VNMHHM
Trigger: CATGTGGTGCATGTTGACCCAGCCACGTGGTGTTGT...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAATACCTGAGACTTGGGTaGGGACACAGATCCAATTCT +
Preference number: 4 (lower is better)
Translates to: GEGEGGISYMAGERGREQYLRLG*GHRSNS
Trigger: AGAATTGGATCTGTGTCCCCACCCAAGTCTCAGGTA...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATGCTATACAGGAAGCATaGCTGGGAGGCCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNAIQEA*LGGLRK
Trigger: TTTCCTGAGGCCTCCCAGCCATGCTTCCTGTATAGC...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCATAAAGAGGTTTAATTaGCTCACAGTCCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRAIKRFN*LTVPQA
Trigger: AGCCTGCGGGACTGTGAGTCAATTAAACCTCTTTAT...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCATGGTCTTCTGGAAGATaGTCTGCATGGCAGAGATCC +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPWSSGR*SAWQRS
Trigger: GGATCTCTGCCATGCAGAGCATCTTCCAGAAGACCA...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GAACTCACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCATCAACATGCACCACATaGAGAGCTTGGCACCTGCAT +
Preference number: 4 (lower is better)
Translates to: ELTHYHENSKGEIHPHDPSTCTT*RAWHLH
Trigger: ATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGA...TGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGTGAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR TCA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCAATCATGGTGGAAGGTaGAGGAGAAGGAGGCATATC +
Preference number: 4 (lower is better)
Translates to: THYHENSKGEIHPHDPITNHGGR*RRRRHI
Trigger: GATATGCCTCCTTCTCCTTCACCTTCCACCATGATT...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATGGACAGTACCCTTTCTaGTGTGTATACCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNGQYPF*CVYPAH
Trigger: ATGTGCTGGGTATACACAGCAGAAAGGGTACTGTCC...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR GCA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCCAGTTGGCTTTAGTTTaGTCTAAGAACGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVQLALV*SKNEVG
Trigger: TCCTACCTCGTTCTTAGAGCAAACTAAAGCCAACTG...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGATCCGGTCCTTATCCTaGATGTTGAAGACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGIRSLS*MLKTWN
Trigger: GTTCCAGGTCTTCAACATCCAGGATAAGGACCGGAT...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCTACCTGAGATTTGGGTaGGGATACAGATACAATCCA +
Preference number: 4 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRAYLRFG*GYRYNP
Trigger: TGGATTGTATCTGTATCCCCACCCAAATCTCAGGTA...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CCA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATATTCTACCTGAGATTTaGGTGGGGATACAGATACAA +
Preference number: 4 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNILPEI*VGIQIQ
Trigger: TTGTATCTGTATCCCCACCCAAATCTCAGGTAGAAT...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 90 bp GGCCCAGGTGGGTGGCGTGGATGCGCAGGGCCGCCTCGGGCTGGCTaGCGAAGCCCTCCACGCGCTGGTAGATGGCACCAAGGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GPGGWRGCAGPPRAG*RSPPRAGRWHQGPG
Trigger: GCCTGGACCTTGGTGCCATCTACCAGCGCGTGGAGGGCTTCGCCAGCCAGCCCGAGGCGGCCCTGCGCATCCACGCCACCCACCTGGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 90 bp CTGCGCGCTGGAAGTCCTGGGCACGCGGCGCCTCCCGGGACCGGATaGCCTGCAGGTAGTGGTGCCACAGGGGCACCTGCACGGCCATGG +
Preference number: 5 (lower is better)
Translates to: LRAGSPGHAAPPGTG*PAGSGATGAPARPW
Trigger: CCATGGCCGTGCAGGTGCCCCTGTGGCACCACTACCTGCAGGCCATCCGGTCCCGGGAGGCGCCGCGTGCCCAGGACTTCCAGCGCGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS CCA 90 bp GCATGCACGCGCTCCAGCACCGTGAGCAGCACGTTCTCTGCGCGCTaGAAGTCCTGGGCACGCGGCGCCTCCCGGGACCGGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ACTRSSTVSSTFSAR*KSWARGASRDRMAC
Trigger: GCAGGCCATCCGGTCCCGGGAGGCGCCGCGTGCCCAGGACTTCCAGCGCGCAGAGAACGTGCTGCTCACGGTGCTGGAGCGCGTGCATGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS GCA 90 bp GTCCAGGGCATGCACGCGCTCCAGCACCGTGAGCAGCACGTTCTCTaGGCGCTGGAAGTCCTGGGCACGCGGCGCCTCCCGGGACCGGAT +
Preference number: 5 (lower is better)
Translates to: VQGMHALQHREQHVL*ALEVLGTRRLPGPD
Trigger: ATCCGGTCCCGGGAGGCGCCGCGTGCCCAGGACTTCCAGCGCGCAGAGAACGTGCTGCTCACGGTGCTGGAGCGCGTGCATGCCCTGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS CCA 90 bp GCAGCAGGTTGCGCTGCGGGTGGAGGAAGTGGGGCAGCTTCCGCGTaGCCAGGCAACAGAGCAGCACCACCAGCAGGCGGTACACGGCGC +
Preference number: 5 (lower is better)
Translates to: AAGCAAGGGSGAASA*PGNRAAPPAGGTRR
Trigger: GCGCCGTGTACCGCCTGCTGGTGGTGCTGCTCTGTTGCCTGGCCACGCGGAAGCTGCCCCACTTCCTCCACCCGCAGCGCAACCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS GCA 90 bp CGAAGCCCTCCACGCGCTGGTAGATGGCACCAAGGTCCAGGCCGCTaGCCTGCAGCAGGTTGCGCTGCGGGTGGAGGAAGTGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: RSPPRAGRWHQGPGR*PAAGCAAGGGSGAA
Trigger: AGCTGCCCCACTTCCTCCACCCGCAGCGCAACCTGCTGCAGGGCAGCGGCCTGGACCTTGGTGCCATCTACCAGCGCGTGGAGGGCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS TCA 90 bp GCAGGCCAGCTGTGCAGATGGGCTGTGAGGAGGCACCTGCCCAGGTaGGCAGCAGGTCTGCAGGTGGGGCCTCAGCTCCCACACAGCAGA +
Preference number: 5 (lower is better)
Translates to: AGQLCRWAVRRHLPR*AAGLQVGPQLPHSR
Trigger: TCTGCTGTGTGGGAGCTGAGGCCCCACCTGCAGACCTGCTGCTCACCTGGGCAGGTGCCTCCTCACAGCCCATCTGCACAGCTGGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CAA 90 bp AGGGGCCACTTCCACGGGGACGGGAAGAAGCAGATGGGAGTAGTCCTGGGCAGGCTGCCCTGCAGCAGGTaGCGCTGCGGGTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RGHFHGDGKKQMGVVLGRLPCSR*RCGWRK
Trigger: CTTCCTCCACCCGCAGCGCAACCTGCTGCAGGGCAG...CCTGCCCAGGACTACTCCCATCTGCTTCTTCCCGTCCCCGTGGAAGTGGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS TCA 90 bp GCACAATGTGTCCACGGCACTTGGCGTCACCCTCCGAGGAGGCAGTaGAGGTATCCTCGGTGGTCCACCGCTCCAGGCCAGCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: AQCVHGTWRHPPRRQ*RYPRWSTAPGQPLP
Trigger: GGGAAGGGGCTGGCCTGGAGCGGTGGACCACCGAGGATACCTTCACTGCCTCCTCGGAGGGTGACGCCAAGTGCCGTGGACACATTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CAA 90 bp GCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGGCCCTGACAGCTGCAGGAGCGCCTaGAGCCCGGAGCCGATGCGC +
Preference number: 5 (lower is better)
Translates to: AGSTCTTWRAWHLHPGPDSCRSA*SPEPMR
Trigger: GCGCATCGGCTCCGGGCTCAAGGCGCTCCTGCAGCT...GTCAGGGCCTGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS TCA 90 bp AGGTCAGGCCGTCAGTCTGGCCACTGTCACGCCAGCTCTCGTGGTTaGCCCGGTCGAGGATGGAGAGGCTGTCCAGGCGATGACCCTGCA +
Preference number: 5 (lower is better)
Translates to: RSGRQSGHCHASSRG*PGRGWRGCPGDDPA
Trigger: TGCAGGGTCATCGCCTGGACAGCCTCTCCATCCTCGACCGGGTCAACCACGAGAGCTGGCGTGACAGTGGCCAGACTGACGGCCTGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 90 bp TCCAGGGCAGGCGCCCCAAGCTTCCTTCTCACCACGGGCACCACGTaGAAGCTGATTGTTCTCCAGCCGCTGGACACCAGCAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: SRAGAPSFLLTTGTT*KLIVLQPLDTSKDR
Trigger: CCTGTCCTTGCTGGTGTCCAGCGGCTGGAGAACAATCAGCTTCCACGTGGTGCCCGTGGTGAGAAGGAAGCTTGGGGCGCCTGCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 90 bp GTGCAGAGTCTGTTGGGGAGCCAAGAACAGGTGGCTGAGACCAGGTaGCCCAGCTCAGCTCTCCTCGCCTCCCAGAGTCCTGGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: VQSLLGSQEQVAETR*PSSALLASQSPGLL
Trigger: CAGAAGACCAGGACTCTGGGAGGCGAGGAGAGCTGAGCTGGGCCACCTGGTCTCAGCCACCTGTTCTTGGCTCCCCAACAGACTCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS GCA 90 bp CTGTGTCCATCCCTGGACCTCAGCCAAGTGAGGAGCTGGCCACCATaGCTGCCCAATGGTGACAGTCCTCGGCACAACTGTCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LCPSLDLSQVRSWPP*LPNGDSPRHNCQLS
Trigger: GCTGAGCTGACAGTTGTGCCGAGGACTGTCACCATTGGGCAGGCATGGTGGCCAGCTCCTCACTTGGCTGAGGTCCAGGGATGGACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS CCA 90 bp TCCCTGGGCACACCCAGGTGGCATAATTCAAGGCCATCCTCCGGCTaGGTGGCCTCTGGTTCCTCAATCAGTAGAGCCTCGGCATCCACC +
Preference number: 5 (lower is better)
Translates to: SLGTPRWHNSRPSSG*VASGSSISRASAST
Trigger: GGTGGATGCCGAGGCTCTACTGATTGAGGAACCAGAGGCCACCCAGCCGGAGGATGGCCTTGAATTATGCCACCTGGGTGTGCCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS-3UTR CAA 90 bp ATCCCTCCACTACCCCCTCAAGGAGAAGCCCGTTTCTTCTTCCAAACATCCCAGAGCTGCAGGAGCGCCTaGAGCCCGGAGCCGATGCGC +
Preference number: 5 (lower is better)
Translates to: IPPLPPQGEARFFFQTSQSCRSA*SPEPMR
Trigger: GCGCATCGGCTCCGGGCTCAAGGCGCTCCTGCAGCT...CTGGGATGTTTGGAAGAAGAAACGGGCTTCTCCTTGAGGGGGTAGTGGAGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp CTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCAGCTGCAGGAGCGCCTaGAGCCCGGAGCCGATGCGC +
Preference number: 5 (lower is better)
Translates to: LQHWGLQVYLRLGWGHRSSCRSA*SPEPMR
Trigger: GCGCATCGGCTCCGGGCTCAAGGCGCTCCTGCAGCT...GGATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 90 bp TTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTaGGGAGCCAAGAACAGGTGGCTGAGACCAGGTGGCCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: FQTSQEPPMVQCRVC*GAKNRWLRPGGPAQ
Trigger: CTGAGCTGGGCCACCTGGTCTCAGCCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 90 bp TGGGCACACCCAGGTGGCATAATTCAAGGCCATCCTCCGGCTGGGTaGCCTCTGGTTCCTCAATCAGTAGAGCCTCGGCATCCACCCACA +
Preference number: 5 (lower is better)
Translates to: WAHPGGIIQGHPPAG*PLVPQSVEPRHPPT
Trigger: TGTGGGTGGATGCCGAGGCTCTACTGATTGAGGAACCAGAGGCCACCCAGCCGGAGGATGGCCTTGAATTATGCCACCTGGGTGTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS CCA 90 bp TCAGCGAACCTGTGTCCATCCCTGGACCTCAGCCAAGTGAGGAGCTaGCCACCATGCCTGCCCAATGGTGACAGTCCTCGGCACAACTGT +
Preference number: 5 (lower is better)
Translates to: SANLCPSLDLSQVRS*PPCLPNGDSPRHNC
Trigger: ACAGTTGTGCCGAGGACTGTCACCATTGGGCAGGCATGGTGGCCAGCTCCTCACTTGGCTGAGGTCCAGGGATGGACACAGGTTCGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402775.6
CDS-3UTR CAA 90 bp GTGCAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGCAGTGCAGAGTCTGTaGGGGAGCCAAGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: VQAGPSPQLQVSCRCCLLAVQSL*GSQEQV
Trigger: CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGC...AAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGATGTGTCCACGGCACTaGGCGTCACCCTCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: SSKHPRSLPWCSAESVGEMCPRH*ASPSEE
Trigger: CTCCTCGGAGGGTGACGCCAAGTGCCGTGGACACAT...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS GCA 90 bp CGAACCTGGTGCGATGAGACTGTGGTGCTTGCAGTGTACGATGGCTaGTACCAGCAGGTCCTTGAGGACACACAGGACCTTGCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: RTWCDETVVLAVYDG*YQQVLEDTQDLAGH
Trigger: GTGCCCAGCAAGGTCCTGTGTGTCCTCAAGGACCTGCTGGTAGCAGCCATCGTACACTGCAAGCACCACAGTCTCATCGCACCAGGTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CAA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGACGCCAGCTCTCGTGGTaGACCCGGTCGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRRQLSW*TRSRME
Trigger: CTCCATCCTCGACCGGGTCAACCACGAGAGCTGGCG...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp CCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATCCGCCAGCTCTCGTGGTaGACCCGGTCGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: PPTLGITSLPETWVGTQIRQLSW*TRSRME
Trigger: CTCCATCCTCGACCGGGTCAACCACGAGAGCTGGCG...GATCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCAGCAGTGCAGAGTCTGTaGGGGAGCCAAGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPAVQSL*GSQEQV
Trigger: CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGC...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp CAGGCAGGGCCAAGTCCTCAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAGGACACACAGGACCTaGCTGGGCACAATGTGTCCA +
Preference number: 5 (lower is better)
Translates to: QAGPSPQLQVSCRCCLLDRTHRT*LGTMCP
Trigger: TGGACACATTGTGCCCAGCAAGGTCCTGTGTGTCCT...GTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTGAGGACTTGGCCCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS TCA 90 bp GACTGTGGTGCTTGCAGTGTACGATGGCTGCTACCAGCAGGTCCTTaGGGACACACAGGACCTTGCTGGGCACAATGTGTCCACGGCACT +
Preference number: 5 (lower is better)
Translates to: DCGACSVRWLLPAGP*GHTGPCWAQCVHGT
Trigger: AGTGCCGTGGACACATTGTGCCCAGCAAGGTCCTGTGTGTCCTCAAGGACCTGCTGGTAGCAGCCATCGTACACTGCAAGCACCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS GCA 90 bp CAGCTCTCCTCGCCTCCCAGAGTCCTGGTCTTCTGGAAGATGCTCTaGATGGCAGAGATCCGGTCCTTATCCTGGATGTTGAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: QLSSPPRVLVFWKML*MAEIRSLSWMLKTW
Trigger: CCAGGTCTTCAACATCCAGGATAAGGACCGGATCTCTGCCATGCAGAGCATCTTCCAGAAGACCAGGACTCTGGGAGGCGAGGAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp TCTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTTGGGGAGTCCTGCCGATGCTGTTaGCTTGACAACACCACGTGG +
Preference number: 5 (lower is better)
Translates to: SSKHPRSLPWCSAESVGESCRCC*LDNTTW
Trigger: CCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGA...CTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGAGCACCTCCATGTCCATaGGGTCCTCAGAGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRAPPCP*GPQRSA
Trigger: TGCGCTCCTCTGAGGACCCAATGGACATGGAGGTGC...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CAA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCCTGCCCTGCAGCAGGTaGCGCTGCGGGTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: THYHENSKGEIHPHDPITLPCSR*RCGWRK
Trigger: CTTCCTCCACCCGCAGCGCAACCTGCTGCAGGGCAG...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATCTGCCCTGCAGCAGGTaGCGCTGCGGGTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNLPCSR*RCGWRK
Trigger: CTTCCTCCACCCGCAGCGCAACCTGCTGCAGGGCAG...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp GTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTCAACATGCATCCTGCCGATGCTGTTaGCTTGACAACACCACGTGG +
Preference number: 5 (lower is better)
Translates to: VSCRCCLLDNTTWLGQHASCRCC*LDNTTW
Trigger: CCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGA...TGCATGTTGACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp CAGCTCCAGGTCTCCTGCCGATGCTGTTTGCTTGACAACACCACGTGGCTGGGTTGTGTGCACCCTCAGTaGGCTTTAGTTTGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: QLQVSCRCCLLDNTTWLGCVHPQ*ALVCSK
Trigger: CTTAGAGCAAACTAAAGCCAACTGAGGGTGCACACA...ACCCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGAGACCTGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp CACCACGTGGCTGGGTCAACATGCACCACATGGAGAGCTTGGCACCTGCATCCATGTGTGCACCCTCAGTaGGCTTTAGTTTGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: HHVAGSTCTTWRAWHLHPCVHPQ*ALVCSK
Trigger: CTTAGAGCAAACTAAAGCCAACTGAGGGTGCACACA...TGGATGCAGGTGCCAAGCTCTCCATGTGGTGCATGTTGACCCAGCCACGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp CTCCTCCAACACTGGGGATTACAAGTCTACCTGAGACTTGGGTGGGGACACAGATTGAAGACCTGGAACTaGTCCAGCAGGACGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LLQHWGLQVYLRLGWGHRLKTWN*SSRTSK
Trigger: CTTCGACGTCCTGCTGGACAAGTTCCAGGTCTTCAA...TCTGTGTCCCCACCCAAGTCTCAGGTAGACTTGTAATCCCCAGTGTTGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCGCAGTGCAGAGTCTGTaGGGGAGCCAAGAACAGGTG +
Preference number: 5 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRAAVQSL*GSQEQV
Trigger: CACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGC...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCGCCGATGCTGTTTGCTaGACAACACCACGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVADAVC*TTPRGW
Trigger: CCAGCCACGTGGTGTTGTCAAGCAAACAGCATCGGC...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp GGTGAAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAATCCTGCCGATGCTGTTaGCTTGACAACACCACGTGG +
Preference number: 5 (lower is better)
Translates to: GEGEGGISYMAGERGREQSCRCC*LDNTTW
Trigger: CCACGTGGTGTTGTCAAGCAAACAGCATCGGCAGGA...TTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp ATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCAAGTCTTGAAGACCTGGAACTaGTCCAGCAGGACGTCGAAG +
Preference number: 5 (lower is better)
Translates to: IYSISSPRNGIQCRQGQVLKTWN*SSRTSK
Trigger: CTTCGACGTCCTGCTGGACAAGTTCCAGGTCTTCAA...GACTTGGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp AAACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGTTGAAGACCTGGAACTaGTCCAGCAGGACGTCGAAG +
Preference number: 5 (lower is better)
Translates to: KPNIQHFVTKEWHTVQAGLKTWN*SSRTSK
Trigger: CTTCGACGTCCTGCTGGACAAGTTCCAGGTCTTCAA...CCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp ACCAAATATACAGCATTTCGTCACCAAGGAATGGCATACAGTGCAGGCAGGGCCTCCTTATCCTGGATGTaGAAGACCTGGAACTTGTCC +
Preference number: 5 (lower is better)
Translates to: TKYTAFRHQGMAYSAGRASLSWM*KTWNLS
Trigger: GGACAAGTTCCAGGTCTTCAACATCCAGGATAAGGA...GGCCCTGCCTGCACTGTATGCCATTCCTTGGTGACGAAATGCTGTATATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp GTGGGGACACAGATCCAATTCTACCTGAGATTTGGGTGGGGATACAGATACAATATGAGACTGTGGTGCTaGCAGTGTACGATGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VGTQIQFYLRFGWGYRYNMRLWC*QCTMAA
Trigger: AGCAGCCATCGTACACTGCAAGCACCACAGTCTCAT...ATTGTATCTGTATCCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS-3UTR CAA 90 bp AAGGAGAAGGAGGCATATCTTACATGGCCGGAGAAAGAGGAAGAGAGCAAAAGGTCCTTATCCTGGATGTaGAAGACCTGGAACTTGTCC +
Preference number: 5 (lower is better)
Translates to: KEKEAYLTWPEKEEESKRSLSWM*KTWNLS
Trigger: GGACAAGTTCCAGGTCTTCAACATCCAGGATAAGGA...CCTTTTGCTCTCTTCCTCTTTCTCCGGCCATGTAAGATATGCCTCCTTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS-3UTR CAA 90 bp ACTCACTATCATGAGAACAGTAAGGGAGAAATCCACCCCCATGATCCAATCACCTGTGTGCACCCTCAGTaGGCTTTAGTTTGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: THYHENSKGEIHPHDPITCVHPQ*ALVCSK
Trigger: CTTAGAGCAAACTAAAGCCAACTGAGGGTGCACACA...GGTGATTGGATCATGGGGGTGGATTTCTCCCTTACTGTTCTCATGATAGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 72 bp CGCTCCAGCACCGTGAGCAGCACGTTCTCTGCGCGCTaGAAGTCCTGGGCACGCGGCGCCTCCCGGGACCGG +
Preference number: 6 (lower is better)
Translates to: RSSTVSSTFSAR*KSWARGASRDR
Trigger: CCGGTCCCGGGAGGCGCCGCGTGCCCAGGACTTCCAGCGCGCAGAGAACGTGCTGCTCACGGTGCTGGAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS CCA 72 bp GGGTGGCGTGGATGCGCAGGGCCGCCTCGGGCTGGCTaGCGAAGCCCTCCACGCGCTGGTAGATGGCACCAA +
Preference number: 6 (lower is better)
Translates to: GWRGCAGPPRAG*RSPPRAGRWHQ
Trigger: TTGGTGCCATCTACCAGCGCGTGGAGGGCTTCGCCAGCCAGCCCGAGGCGGCCCTGCGCATCCACGCCACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 72 bp GGAAGTCCTGGGCACGCGGCGCCTCCCGGGACCGGATaGCCTGCAGGTAGTGGTGCCACAGGGGCACCTGCA +
Preference number: 6 (lower is better)
Translates to: GSPGHAAPPGTG*PAGSGATGAPA
Trigger: TGCAGGTGCCCCTGTGGCACCACTACCTGCAGGCCATCCGGTCCCGGGAGGCGCCGCGTGCCCAGGACTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS CCA 72 bp ACCGTGAGCAGCACGTTCTCTGCGCGCTGGAAGTCCTaGGCACGCGGCGCCTCCCGGGACCGGATGGCCTGC +
Preference number: 6 (lower is better)
Translates to: TVSSTFSARWKS*ARGASRDRMAC
Trigger: GCAGGCCATCCGGTCCCGGGAGGCGCCGCGTGCCCAGGACTTCCAGCGCGCAGAGAACGTGCTGCTCACGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS GCA 72 bp ATGCACGCGCTCCAGCACCGTGAGCAGCACGTTCTCTaGGCGCTGGAAGTCCTGGGCACGCGGCGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: MHALQHREQHVL*ALEVLGTRRLP
Trigger: CGGGAGGCGCCGCGTGCCCAGGACTTCCAGCGCGCAGAGAACGTGCTGCTCACGGTGCTGGAGCGCGTGCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS CCA 72 bp CGGGCTGGCTGGCGAAGCCCTCCACGCGCTGGTAGATaGCACCAAGGTCCAGGCCGCTGCCCTGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: RAGWRSPPRAGR*HQGPGRCPAAG
Trigger: ACCTGCTGCAGGGCAGCGGCCTGGACCTTGGTGCCATCTACCAGCGCGTGGAGGGCTTCGCCAGCCAGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS TCA 72 bp AGCGGGGGTCCAGGGCATGCACGCGCTCCAGCACCGTaGGCAGCACGTTCTCTGCGCGCTGGAAGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SGGPGHARAPAP*AARSLRAGSPG
Trigger: CCCAGGACTTCCAGCGCGCAGAGAACGTGCTGCTCACGGTGCTGGAGCGCGTGCATGCCCTGGACCCCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS GCA 72 bp CAGAGCAGCACCACCAGCAGGCGGTACACGGCGCCCTaGAGTTCTGCCCAGTCCTCGGGCGCCAGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: QSSTTSRRYTAP*SSAQSSGARKS
Trigger: GCTCTTCCTGGCGCCCGAGGACTGGGCAGAACTGCAGGGCGCCGTGTACCGCCTGCTGGTGGTGCTGCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 72 bp TGCGCTGCGGGTGGAGGAAGTGGGGCAGCTTCCGCGTaGCCAGGCAACAGAGCAGCACCACCAGCAGGCGGT +
Preference number: 6 (lower is better)
Translates to: CAAGGGSGAASA*PGNRAAPPAGG
Trigger: ACCGCCTGCTGGTGGTGCTGCTCTGTTGCCTGGCCACGCGGAAGCTGCCCCACTTCCTCCACCCGCAGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 72 bp CTGCCCTGCAGCAGGTTGCGCTGCGGGTGGAGGAAGTaGGGCAGCTTCCGCGTGGCCAGGCAACAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: LPCSRLRCGWRK*GSFRVARQQSS
Trigger: GCTGCTCTGTTGCCTGGCCACGCGGAAGCTGCCCCACTTCCTCCACCCGCAGCGCAACCTGCTGCAGGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS GCA 72 bp CCACGCGCTGGTAGATGGCACCAAGGTCCAGGCCGCTaGCCTGCAGCAGGTTGCGCTGCGGGTGGAGGAAGT +
Preference number: 6 (lower is better)
Translates to: PRAGRWHQGPGR*PAAGCAAGGGS
Trigger: ACTTCCTCCACCCGCAGCGCAACCTGCTGCAGGGCAGCGGCCTGGACCTTGGTGCCATCTACCAGCGCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS TCA 72 bp ACTGGAAGGCCTCCAGGCCACGGGAGTAGTCCACGATaGAGCGGGGGTCCAGGGCATGCACGCGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: TGRPPGHGSSPR*SGGPGHARAPA
Trigger: TGCTGGAGCGCGTGCATGCCCTGGACCCCCGCTTCATCGTGGACTACTCCCGTGGCCTGGAGGCCTTCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS TCA 72 bp GTCCACGGCACTTGGCGTCACCCTCCGAGGAGGCAGTaGAGGTATCCTCGGTGGTCCACCGCTCCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: VHGTWRHPPRRQ*RYPRWSTAPGQ
Trigger: CTGGCCTGGAGCGGTGGACCACCGAGGATACCTTCACTGCCTCCTCGGAGGGTGACGCCAAGTGCCGTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS CCA 72 bp CAGAGCTGGGCGCTGGCCGGCACCAGGTCCACCCCTTaGCTGAGGATCCTTCTCAAGCTGCCCTCAGGGAAT +
Preference number: 6 (lower is better)
Translates to: QSWALAGTRSTP*LRILLKLPSGN
Trigger: ATTCCCTGAGGGCAGCTTGAGAAGGATCCTCAGCCAAGGGGTGGACCTGGTGCCGGCCAGCGCCCAGCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 72 bp AGGCCGTCAGTCTGGCCACTGTCACGCCAGCTCTCGTaGTTGACCCGGTCGAGGATGGAGAGGCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RPSVWPLSRQLS*LTRSRMERLSR
Trigger: CCTGGACAGCCTCTCCATCCTCGACCGGGTCAACCACGAGAGCTGGCGTGACAGTGGCCAGACTGACGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 72 bp CTCGGCATCCACCCACAGGGGCACCTCCATGTCCATTaGGTCCTCAGAGGAGCGCAGGGCGAACTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: LGIHPQGHLHVH*VLRGAQGELEG
Trigger: GCCTTCCAGTTCGCCCTGCGCTCCTCTGAGGACCCAATGGACATGGAGGTGCCCCTGTGGGTGGATGCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS CAA 72 bp CCGTCAGTCTGGCCACTGTCACGCCAGCTCTCGTGGTaGACCCGGTCGAGGATGGAGAGGCTGTCCAGGCGA +
Preference number: 6 (lower is better)
Translates to: PSVWPLSRQLSW*TRSRMERLSRR
Trigger: TCGCCTGGACAGCCTCTCCATCCTCGACCGGGTCAACCACGAGAGCTGGCGTGACAGTGGCCAGACTGACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CAA 90 bp TCAGTAGAGCCTCGGCATCCACCCACAGGGGCACCTCCATGTCCATaGGGTCCTCAGAGGAGCGCAGGGCGAACTGGAAGGCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: SVEPRHPPTGAPPCP*GPQRSAGRTGRPPG
Trigger: GCCTGGAGGCCTTCCAGTTCGCCCTGCGCTCCTCTGAGGACCCAATGGACATGGAGGTGCCCCTGTGGGTGGATGCCGAGGCTCTACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS TCA 72 bp CGTCAGTCTGGCCACTGTCACGCCAGCTCTCGTGGTTaGCCCGGTCGAGGATGGAGAGGCTGTCCAGGCGAT +
Preference number: 6 (lower is better)
Translates to: RQSGHCHASSRG*PGRGWRGCPGD
Trigger: ATCGCCTGGACAGCCTCTCCATCCTCGACCGGGTCAACCACGAGAGCTGGCGTGACAGTGGCCAGACTGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 72 bp GGCGCCCCAAGCTTCCTTCTCACCACGGGCACCACGTaGAAGCTGATTGTTCTCCAGCCGCTGGACACCAGC +
Preference number: 6 (lower is better)
Translates to: GAPSFLLTTGTT*KLIVLQPLDTS
Trigger: GCTGGTGTCCAGCGGCTGGAGAACAATCAGCTTCCACGTGGTGCCCGTGGTGAGAAGGAAGCTTGGGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 72 bp CTGTGTCCATCCCTGGACCTCAGCCAAGTGAGGAGCTaGCCACCATGCCTGCCCAATGGTGACAGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: LCPSLDLSQVRS*PPCLPNGDSPR
Trigger: CCGAGGACTGTCACCATTGGGCAGGCATGGTGGCCAGCTCCTCACTTGGCTGAGGTCCAGGGATGGACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS CCA 72 bp ACCATCTTCAGGTGGCCAAAGGTCAGGCCGTCAGTCTaGCCACTGTCACGCCAGCTCTCGTGGTTGACCCGG +
Preference number: 6 (lower is better)
Translates to: TIFRWPKVRPSV*PLSRQLSWLTR
Trigger: CCGGGTCAACCACGAGAGCTGGCGTGACAGTGGCCAGACTGACGGCCTGACCTTTGGCCACCTGAAGATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS GCA 72 bp TCCCTGGACCTCAGCCAAGTGAGGAGCTGGCCACCATaGCTGCCCAATGGTGACAGTCCTCGGCACAACTGT +
Preference number: 6 (lower is better)
Translates to: SLDLSQVRSWPP*LPNGDSPRHNC
Trigger: ACAGTTGTGCCGAGGACTGTCACCATTGGGCAGGCATGGTGGCCAGCTCCTCACTTGGCTGAGGTCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS CAA 72 bp CACAGGACCTTGCTGGGCACAATGTGTCCACGGCACTaGGCGTCACCCTCCGAGGAGGCAGTGAAGGTATCC +
Preference number: 6 (lower is better)
Translates to: HRTLLGTMCPRH*ASPSEEAVKVS
Trigger: GGATACCTTCACTGCCTCCTCGGAGGGTGACGCCAAGTGCCGTGGACACATTGTGCCCAGCAAGGTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS CAA 90 bp CTTCCAAACATCCCAGGAGCCTCCCATGGTGCAGTGCAGAGTCTGTaGGGGAGCCAAGAACAGGTGGCTGAGACCAGGTGGCCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: LPNIPGASHGAVQSL*GSQEQVAETRWPSS
Trigger: TGAGCTGGGCCACCTGGTCTCAGCCACCTGTTCTTGGCTCCCCAACAGACTCTGCACTGCACCATGGGAGGCTCCTGGGATGTTTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CAA 90 bp TTGAGGACACACAGGACCTTGCTGGGCACAATGTGTCCACGGCACTaGGCGTCACCCTCCGAGGAGGCAGTGAAGGTATCCTCGGTGGTC +
Preference number: 6 (lower is better)
Translates to: LRTHRTLLGTMCPRH*ASPSEEAVKVSSVV
Trigger: GACCACCGAGGATACCTTCACTGCCTCCTCGGAGGGTGACGCCAAGTGCCGTGGACACATTGTGCCCAGCAAGGTCCTGTGTGTCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS CAA 90 bp TGTACGATGGCTGCTACCAGCAGGTCCTTGAGGACACACAGGACCTaGCTGGGCACAATGTGTCCACGGCACTTGGCGTCACCCTCCGAG +
Preference number: 6 (lower is better)
Translates to: CTMAATSRSLRTHRT*LGTMCPRHLASPSE
Trigger: CTCGGAGGGTGACGCCAAGTGCCGTGGACACATTGTGCCCAGCAAGGTCCTGTGTGTCCTCAAGGACCTGCTGGTAGCAGCCATCGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS TCA 72 bp CCAAGTGAGGAGCTGGCCACCATGCCTGCCCAATGGTaGCAGTCCTCGGCACAACTGTCAGCTCAGCGACTT +
Preference number: 6 (lower is better)
Translates to: PSEELATMPAQW*QSSAQLSAQRL
Trigger: AAGTCGCTGAGCTGACAGTTGTGCCGAGGACTGTCACCATTGGGCAGGCATGGTGGCCAGCTCCTCACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307486.12
ENST00000402775.6
CDS CAA 72 bp GCTGCTACCAGCAGGTCCTTGAGGACACACAGGACCTaGCTGGGCACAATGTGTCCACGGCACTTGGCGTCA +
Preference number: 6 (lower is better)
Translates to: AATSRSLRTHRT*LGTMCPRHLAS
Trigger: TGACGCCAAGTGCCGTGGACACATTGTGCCCAGCAAGGTCCTGTGTGTCCTCAAGGACCTGCTGGTAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS CCA 72 bp CCAGGTGGCATAATTCAAGGCCATCCTCCGGCTGGGTaGCCTCTGGTTCCTCAATCAGTAGAGCCTCGGCAT +
Preference number: 6 (lower is better)
Translates to: PGGIIQGHPPAG*PLVPQSVEPRH
Trigger: ATGCCGAGGCTCTACTGATTGAGGAACCAGAGGCCACCCAGCCGGAGGATGGCCTTGAATTATGCCACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS CCA 72 bp ACACCCAGGTGGCATAATTCAAGGCCATCCTCCGGCTaGGTGGCCTCTGGTTCCTCAATCAGTAGAGCCTCG +
Preference number: 6 (lower is better)
Translates to: TPRWHNSRPSSG*VASGSSISRAS
Trigger: CGAGGCTCTACTGATTGAGGAACCAGAGGCCACCCAGCCGGAGGATGGCCTTGAATTATGCCACCTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388934.5
ENST00000414499.1
ENST00000454476.2
CDS TCA 72 bp GCTTGCAGTGTACGATGGCTGCTACCAGCAGGTCCTTaGGGACACACAGGACCTTGCTGGGCACAATGTGTC +
Preference number: 6 (lower is better)
Translates to: ACSVRWLLPAGP*GHTGPCWAQCV
Trigger: GACACATTGTGCCCAGCAAGGTCCTGTGTGTCCTCAAGGACCTGCTGGTAGCAGCCATCGTACACTGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS GCA 72 bp TCTCCTCGCCTCCCAGAGTCCTGGTCTTCTGGAAGATaGTCTGCATGGCAGAGATCCGGTCCTTATCCTGGA +
Preference number: 6 (lower is better)
Translates to: SPRLPESWSSGR*SAWQRSGPYPG
Trigger: TCCAGGATAAGGACCGGATCTCTGCCATGCAGAGCATCTTCCAGAAGACCAGGACTCTGGGAGGCGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS GCA 72 bp TCGCCTCCCAGAGTCCTGGTCTTCTGGAAGATGCTCTaGATGGCAGAGATCCGGTCCTTATCCTGGATGTTG +
Preference number: 6 (lower is better)
Translates to: SPPRVLVFWKML*MAEIRSLSWML
Trigger: CAACATCCAGGATAAGGACCGGATCTCTGCCATGCAGAGCATCTTCCAGAAGACCAGGACTCTGGGAGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS GCA 72 bp TGCGATGAGACTGTGGTGCTTGCAGTGTACGATGGCTaGTACCAGCAGGTCCTTGAGGACACACAGGACCTT +
Preference number: 6 (lower is better)
Translates to: CDETVVLAVYDG*YQQVLEDTQDL
Trigger: AAGGTCCTGTGTGTCCTCAAGGACCTGCTGGTAGCAGCCATCGTACACTGCAAGCACCACAGTCTCATCGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS CAA 72 bp TGCTTGCAGTGTACGATGGCTGCTACCAGCAGGTCCTaGAGGACACACAGGACCTTGCTGGGCACAATGTGT +
Preference number: 6 (lower is better)
Translates to: CLQCTMAATSRS*RTHRTLLGTMC
Trigger: ACACATTGTGCCCAGCAAGGTCCTGTGTGTCCTCAAGGACCTGCTGGTAGCAGCCATCGTACACTGCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388934.5
CDS CAA 72 bp CTCTGCATGGCAGAGATCCGGTCCTTATCCTGGATGTaGAAGACCTGGAACTTGTCCAGCAGGACGTCGAAG +
Preference number: 6 (lower is better)
Translates to: LCMAEIRSLSWM*KTWNLSSRTSK
Trigger: CTTCGACGTCCTGCTGGACAAGTTCCAGGTCTTCAACATCCAGGATAAGGACCGGATCTCTGCCATGCAGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS TCA 72 bp TCTGCATGGCAGAGATCCGGTCCTTATCCTGGATGTTaGAGACCTGGAACTTGTCCAGCAGGACGTCGAAGT +
Preference number: 6 (lower is better)
Translates to: SAWQRSGPYPGC*RPGTCPAGRRS
Trigger: ACTTCGACGTCCTGCTGGACAAGTTCCAGGTCTTCAACATCCAGGATAAGGACCGGATCTCTGCCATGCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6
CDS CCA 72 bp AAGATGCTCTGCATGGCAGAGATCCGGTCCTTATCCTaGATGTTGAAGACCTGGAACTTGTCCAGCAGGACG +
Preference number: 6 (lower is better)
Translates to: KMLCMAEIRSLS*MLKTWNLSSRT
Trigger: CGTCCTGCTGGACAAGTTCCAGGTCTTCAACATCCAGGATAAGGACCGGATCTCTGCCATGCAGAGCATCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307486.12
ENST00000388934.5
ENST00000402775.6