RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for M1AP (Homo sapiens)

Ensembl gene IDs: ENSG00000159374

Ensembl transcript IDs: ENST00000290536.9, ENST00000409585.5, ENST00000421985.2, ENST00000422394.5, ENST00000438226.5, ENST00000464686.5, ENST00000478437.1, ENST00000536235.5

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTaGGACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTC +
Preference number: 1 (lower is better)
Translates to: WRKDRLGCVASRLEE*DSTETGQEGCCFPV
Trigger: GACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTCCCACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR CCA 90 bp CCCAGCACACACACTTTGCATGTAGGTACCAAGCACTTGTCTCTTTaGAGGCTGAAGCCTGGTGGTGTAGTGGGAAGGGCACAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: PSTHTLHVGTKHLSL*RLKPGGVVGRAQAL
Trigger: CAGAGCCTGTGCCCTTCCCACTACACCACCAGGCTTCAGCCTCCAAAGAGACAAGTGCTTGGTACCTACATGCAAAGTGTGTGTGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR CCA 90 bp GCATGTAGGTACCAAGCACTTGTCTCTTTGGAGGCTGAAGCCTGGTaGTGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTT +
Preference number: 1 (lower is better)
Translates to: ACRYQALVSLEAEAW*CSGKGTGSEMRLGF
Trigger: AAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACACCACCAGGCTTCAGCCTCCAAAGAGACAAGTGCTTGGTACCTACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR CCA 90 bp TTTGCATGTAGGTACCAAGCACTTGTCTCTTTGGAGGCTGAAGCCTaGTGGTGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGA +
Preference number: 1 (lower is better)
Translates to: FACRYQALVSLEAEA*WCSGKGTGSEMRLG
Trigger: TCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACACCACCAGGCTTCAGCCTCCAAAGAGACAAGTGCTTGGTACCTACATGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR TCA 90 bp AAAACCTCATCCTTGTTCCTGAGGTCCAGTTTACCAAAGGTGATCTaGCCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTG +
Preference number: 1 (lower is better)
Translates to: KTSSLFLRSSLPKVI*PHPPAYTELQEEIL
Trigger: CAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGGTCAGATCACCTTTGGTAAACTGGACCTCAGGAACAAGGATGAGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR TCA 90 bp TCTGACCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTaGGTTATGAATGCTCCTAACAATGGTAGAAGCTTACTGGGTGTT +
Preference number: 1 (lower is better)
Translates to: SDLIHLLTQSYKKKF*VMNAPNNGRSLLGV
Trigger: AACACCCAGTAAGCTTCTACCATTGTTAGGAGCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR TCA 90 bp TCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATaGATGCTCCTAACAATGGTAGAAGCTTACTGGGTGTTTAATCTT +
Preference number: 1 (lower is better)
Translates to: SSTCLHRATRRNSEL*MLLTMVEAYWVFNL
Trigger: AAGATTAAACACCCAGTAAGCTTCTACCATTGTTAGGAGCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR CAA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTaGAGGAGTGGGACAGCACTGAAACAGGACAGGAAGGCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: VLAGERTGSGVSLPD*RSGTALKQDRKAVV
Trigger: AACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTCCCACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR CAA 90 bp CCCCAGCACACACACTTTGCATGTAGGTACCAAGCACTTGTCTCTTaGGAGGCTGAAGCCTGGTGGTGTAGTGGGAAGGGCACAGGCTCT +
Preference number: 2 (lower is better)
Translates to: PQHTHFACRYQALVS*EAEAWWCSGKGTGS
Trigger: AGAGCCTGTGCCCTTCCCACTACACCACCAGGCTTCAGCCTCCAAAGAGACAAGTGCTTGGTACCTACATGCAAAGTGTGTGTGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGTGGATATGGTTAAGCTaGGCAGCTGGGCTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRWIWLS*AAGLWC
Trigger: GCACCAGAGCCCAGCTGCCCAGCTTAACCATATCCA...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR TCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGGGAGTGGGACAGCACTaGAACAGGACAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLGVGQH*NRTGRL
Trigger: CAGCCTTCCTGTCCTGTTTCAGTGCTGTCCCACTCC...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR TCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGATAGAGAGCAAGTCTaGCCACAGATAGCCATTATG +
Preference number: 2 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRDREQV*PQIAIM
Trigger: CATAATGGCTATCTGTGGTCAGACTTGCTCTCTATC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR TCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGCCTCATCCTTGTTCCTaGGGTCCAGTTTACCAAAGG +
Preference number: 2 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEPHPCS*GPVYQR
Trigger: CCTTTGGTAAACTGGACCTCAGGAACAAGGATGAGG...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CCA 90 bp TCCATTCTCAAGGAGCCGTCAGCTGTGCCAGCGAGTAGGGATGGGCAGAGCAGTAGATGGATTTGTTCTTaGTCTGTTCCACTGTTATGT +
Preference number: 2 (lower is better)
Translates to: SILKEPSAVPASRDGQSSRWICS*SVPLLC
Trigger: ACATAACAGTGGAACAGACCAAGAACAAATCCATCT...ACTGCTCTGCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCTTGAGAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
3UTR-3UTR TCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGGAGTGGGACAGCACTaGAACAGGACAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGGVGQH*NRTGRL
Trigger: CAGCCTTCCTGTCCTGTTTCAGTGCTGTCCCACTCC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCTGGATATGGTTAAGCTaGGCAGCTGGGCTCTGGTGC +
Preference number: 2 (lower is better)
Translates to: PHPPAYTELQEEILSYECWIWLS*AAGLWC
Trigger: GCACCAGAGCCCAGCTGCCCAGCTTAACCATATCCA...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGAGGCTGAAGCCTGGTaGTGTAGTGGGAAGGGCACA +
Preference number: 2 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGEAEAW*CSGKGT
Trigger: TGTGCCCTTCCCACTACACCACCAGGCTTCAGCCTC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR GCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGCTGACCTCATCCACCTaGTTACACAGAGCTACAAGA +
Preference number: 2 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLLTSST*LHRATR
Trigger: TCTTGTAGCTCTGTGTAAGCAGGTGGATGAGGTCAG...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CCA 90 bp CAGCTTGTAGGTCTGAGGATGAACGGGAGTCCATATGTCAATGACTCGCAGAGCACATTTCAGACACATTaGATTATCTCTGGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: QLVGLRMNGSPYVNDSQSTFQTH*IISGSG
Trigger: TCCAGACCCAGAGATAATCCAATGTGTCTGAAATGT...GCTCTGCGAGTCATTGACATATGGACTCCCGTTCATCCTCAGACCTACAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
3UTR-3UTR TCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGGATAGAGAGCAAGTCTaGCCACAGATAGCCATTATG +
Preference number: 2 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLDREQV*PQIAIM
Trigger: CATAATGGCTATCTGTGGTCAGACTTGCTCTCTATC...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCTCCAGACTTGAGGAGTaGGACAGCACTGAAACAGGA +
Preference number: 2 (lower is better)
Translates to: PHPPAYTELQEEILSYECSRLEE*DSTETG
Trigger: TCCTGTTTCAGTGCTGTCCCACTCCTCAAGTCTGGA...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR TCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGGAGTGGGACAGCACTaGAACAGGACAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLGVGQH*NRTGRL
Trigger: CAGCCTTCCTGTCCTGTTTCAGTGCTGTCCCACTCC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR TCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTCCTCATCCTTGTTCCTaGGGTCCAGTTTACCAAAGG +
Preference number: 2 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGPHPCS*GPVYQR
Trigger: CCTTTGGTAAACTGGACCTCAGGAACAAGGATGAGG...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTTCCAGACTTGAGGAGTaGGACAGCACTGAAACAGGA +
Preference number: 2 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGSRLEE*DSTETG
Trigger: TCCTGTTTCAGTGCTGTCCCACTCCTCAAGTCTGGA...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR GCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGAAAATGAAAGTCCTTaGTGGAGAAAGGACAGGCTC +
Preference number: 2 (lower is better)
Translates to: PHPPAYTELQEEILSYECENESP*WRKDRL
Trigger: GAGCCTGTCCTTTCTCCAGCAAGGACTTTCATTTTC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCATGGTAGAAGCTTACTaGGTGTTTAATCTTCACCTG +
Preference number: 2 (lower is better)
Translates to: PHPPAYTELQEEILSYECMVEAY*VFNLHL
Trigger: CAGGTGAAGATTAAACACCCAGTAAGCTTCTACCAT...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR CCA 72 bp TACCAAGCACTTGTCTCTTTGGAGGCTGAAGCCTGGTaGTGTAGTGGGAAGGGCACAGGCTCTGAAATGAGG +
Preference number: 3 (lower is better)
Translates to: YQALVSLEAEAW*CSGKGTGSEMR
Trigger: CCTCATTTCAGAGCCTGTGCCCTTCCCACTACACCACCAGGCTTCAGCCTCCAAAGAGACAAGTGCTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CAA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGGTGTCGCTTCCAGACTaGAGGAGTGGGACAGCACTG +
Preference number: 3 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEVSLPD*RSGTAL
Trigger: CAGTGCTGTCCCACTCCTCAAGTCTGGAAGCGACAC...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CAA 90 bp GTAGAGTGTGATGAAGTCTCCTTTAGGGTCATCCATTCTCAAGGAGCCGTCAGCGCAGAGCAGTCGCTCTaGGAGATCACATTTCAGACA +
Preference number: 3 (lower is better)
Translates to: VECDEVSFRVIHSQGAVSAEQSL*EITFQT
Trigger: TGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTGC...GCTGACGGCTCCTTGAGAATGGATGACCCTAAAGGAGACTTCATCACACTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
3UTR TCA 72 bp AGCCTTGATCACTTGGAGCTTGTAATGAGAGGCCGATaGCTGGGAAGCCATCTGGTAGAGTGTGATGAAGTC +
Preference number: 3 (lower is better)
Translates to: SLDHLELVMRGR*LGSHLVECDEV
Trigger: GACTTCATCACACTCTACCAGATGGCTTCCCAGTCATCGGCCTCTCATTACAAGCTCCAAGTGATCAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
3UTR-3UTR CAA 90 bp CAGCTTGTAGGTCTGAGGATGAACGGGAGTCCATATGTCAATGACTCGCAGAGCCACATTTCAGACACATaGGATTATCTCTGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: QLVGLRMNGSPYVNDSQSHISDT*DYLWVW
Trigger: CCAGACCCAGAGATAATCCAATGTGTCTGAAATGTG...GCTCTGCGAGTCATTGACATATGGACTCCCGTTCATCCTCAGACCTACAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
3UTR CCA 72 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTaGTACATGTGGGGAGAGGGTAACAGGAAAGGAGTA +
Preference number: 3 (lower is better)
Translates to: LLFCGWREQQEG*YMWGEGNRKGV
Trigger: TACTCCTTTCCTGTTACCCTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CAA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCAGGACAGGAAGGCTGTaGTTTCCCAGTCAGCCCTCA +
Preference number: 3 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSRTGRL*FPSQPS
Trigger: TGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCT...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CAA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTCCCAGCACACACACTTaGCATGTAGGTACCAAGCAC +
Preference number: 3 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGPSTHT*HVGTKH
Trigger: GTGCTTGGTACCTACATGCAAAGTGTGTGTGCTGGG...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CAA 90 bp GTAGAGTGTGATGAAGTCTCCTTTAGGGTCATCCATTCTCAAGGAGCCGTCAGCAAGATGGATTTGTTCTaGGTCTGTTCCACTGTTATG +
Preference number: 3 (lower is better)
Translates to: VECDEVSFRVIHSQGAVSKMDLF*VCSTVM
Trigger: CATAACAGTGGAACAGACCAAGAACAAATCCATCTT...GCTGACGGCTCCTTGAGAATGGATGACCCTAAAGGAGACTTCATCACACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
3UTR GCA 72 bp GTCCAGTTTACCAAAGGTGATCTGACCTCATCCACCTaGTTACACAGAGCTACAAGAAGAAATTCTGAGTTA +
Preference number: 3 (lower is better)
Translates to: VQFTKGDLTSST*LHRATRRNSEL
Trigger: TAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGGTCAGATCACCTTTGGTAAACTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR-3UTR CAA 90 bp CTTGGAGATCACATTTCAGACACATTGGATTATCTCTGGGTCTGGAAATGTTGCTTATGTAGCCAGGCTTaGAAGAAAATCTCCATGCTG +
Preference number: 3 (lower is better)
Translates to: LGDHISDTLDYLWVWKCCLCSQA*KKISML
Trigger: CAGCATGGAGATTTTCTTCAAAGCCTGGCTACATAA...GCAACATTTCCAGACCCAGAGATAATCCAATGTGTCTGAAATGTGATCTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438226.5
3UTR TCA 72 bp TGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATaGATGCTCCTAACAATGGTAGAAGCTTACTGGGTG +
Preference number: 3 (lower is better)
Translates to: CLHRATRRNSEL*MLLTMVEAYWV
Trigger: CACCCAGTAAGCTTCTACCATTGTTAGGAGCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TCCATTCTCAAGGAGCCGTCAGCTGTGCCAGCGAGTAGGGATGGGCAGAGCAGTTCCCGGCTCTCAGCGTaGGCCCGCGCGTTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SILKEPSAVPASRDGQSSSRLSA*ARAFGG
Trigger: GCCTCCGAACGCGCGGGCGCACGCTGAGAGCCGGGA...ACTGCTCTGCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCTTGAGAATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR GCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGTCCCGGCTCTCAGCGTaGGCCCGCGCGTTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGESRLSA*ARAFGG
Trigger: GCCTCCGAACGCGCGGGCGCACGCTGAGAGCCGGGA...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536235.5
CDS-3UTR CCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTACAGGGACATGCGGCTaGGGCCCATCAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSTGTCG*GPSSCR
Trigger: CCTGCAGCTTGATGGGCCCCAGCCGCATGTCCCTGT...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGTCGGCTCTCCCAGTGTaGGTGGAGCCGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQSALPV*VEPPLR
Trigger: CCTCAGGGGCGGCTCCACCCACACTGGGAGAGCCGA...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTCCGGTGGTTCCCCCTTaGCTAACAGCAGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSPVVPP*LTAAIP
Trigger: GGGAATGGCTGCTGTTAGCCAAGGGGGAACCACCGG...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTGGAGTGGGACAGCACTaGAACAGGACAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSGVGQH*NRTGRL
Trigger: CAGCCTTCCTGTCCTGTTTCAGTGCTGTCCCACTCC...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGAGCCGTCAGCTGTaGCAGCGAGTAGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQRSRQL*QRVGMG
Trigger: GCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCT...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGAGGAGCCGTCAGCTGTaGCAGCGAGTAGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRRSRQL*QRVGMG
Trigger: GCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCT...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTTTCGCCCAGGATGCATaGCAGCAAAACCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSFAQDA*QQNQRG
Trigger: CCCCCTCTGGTTTTGCTGCCATGCATCCTGGGCGAA...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTGAGCCTCACAGAGGTTaGTGCAGATGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSEPHRG*CRCQPR
Trigger: CCTGGGCTGACATCTGCACCAACCTCTGTGAGGCTC...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGTCTCTGGCTGTGTCCTaGGCCCGGTGGTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRSLAVS*ARWFPL
Trigger: AAGGGGGAACCACCGGGCCCAGGACACAGCCAGAGA...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGTCTCTGGCTGTGTCCTaGGCCCGGTGGTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQSLAVS*ARWFPL
Trigger: AAGGGGGAACCACCGGGCCCAGGACACAGCCAGAGA...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGTCGGCTCTCCCAGTGTaGGTGGAGCCGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGESALPV*VEPPLR
Trigger: CCTCAGGGGCGGCTCCACCCACACTGGGAGAGCCGA...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTCTTGGAGGCTCTGCCTaGGACAGGAGTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSLGGSA*DRSHRQ
Trigger: CTGCCTATGACTCCTGTCCCAGGCAGAGCCTCCAAG...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TCCATTCTCAAGGAGCCGTCAGCTGTGCCAGCGAGTAGGGATGGGCAGAGCAGTGAGCAATGTGCACAATaGGAAGCCGTGGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SILKEPSAVPASRDGQSSEQCAQ*EAVEVA
Trigger: AGCAACCTCCACGGCTTCTCATTGTGCACATTGCTC...ACTGCTCTGCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCTTGAGAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR TCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGGGGCTCTGGTGCTGGTaGCTTAGGGCCTTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQGLWCW*LRALRD
Trigger: ATCCCTCAAGGCCCTAAGTCACCAGCACCAGAGCCC...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGGGCTCTGGTGCTGGTaGCTTAGGGCCTTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRGLWCW*LRALRD
Trigger: ATCCCTCAAGGCCCTAAGTCACCAGCACCAGAGCCC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTCGGTTGGTCTGCAACTaGCCAGTCTTTCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSRLVCN*PVFLGA
Trigger: AGCTCCGAGAAAGACTGGGCAGTTGCAGACCAACCG...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGCCGGTGGTTCCCCCTTaGCTAACAGCAGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQPVVPP*LTAAIP
Trigger: GGGAATGGCTGCTGTTAGCCAAGGGGGAACCACCGG...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGGCAAGGGGTTGTAGGTaGGCTCCAGCTCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQARGCR*APAPGC
Trigger: ACAGCCTGGAGCTGGAGCCCACCTACAACCCCTTGC...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
3UTR CAA 72 bp GGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTaGAGGAGTGGGACAGCACTGAAACAGGACAGGAAG +
Preference number: 4 (lower is better)
Translates to: GERTGSGVSLPD*RSGTALKQDRK
Trigger: CTTCCTGTCCTGTTTCAGTGCTGTCCCACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTGAGCAATGTGCACAATaGGAAGCCGTGGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSEQCAQ*EAVEVA
Trigger: AGCAACCTCCACGGCTTCTCATTGTGCACATTGCTC...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTGTAATGAGAGGCCGATaGCTGGGAAGCCATCTGGTA +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSVMRGR*LGSHLV
Trigger: TACCAGATGGCTTCCCAGTCATCGGCCTCTCATTAC...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTGATGCTGCTCAGGTGTaGGTACAGGTGGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSDAAQV*VQVALN
Trigger: GTTCAAAGCCACCTGTACTCACACCTGAGCAGCATC...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTGTAGTTCGCCCAGGATaGATGGCAGCAAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSVVRPG*MAAKPE
Trigger: CTCTGGTTTTGCTGCCATGCATCCTGGGCGAACTAC...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACCTCACAGAGGTTGGTaGAGATGTCAGCCCAGGACG +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSPHRGW*RCQPRT
Trigger: CGTCCTGGGCTGACATCTGCACCAACCTCTGTGAGG...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TTCTCAAGGAGCCGTCAGCTGTGCCAGCGAGTAGGGATGGGCAGAGCAGTCGCTAGAGAGAAGAAGTTCTaGAGAGCCTCACAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FSRSRQLCQRVGMGRAVAREKKF*RASQRL
Trigger: CAACCTCTGTGAGGCTCTGCAGAACTTCTTCTCTCT...AGCGACTGCTCTGCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCTTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR GCA 90 bp GAGTGTGATGAAGTCTCCTTTAGGGTCATCCATTCTCAAGGAGCCGTCAGCTGTAGGAGCCGTCAGCTGTaGCAGCGAGTAGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: ECDEVSFRVIHSQGAVSCRSRQL*QRVGMG
Trigger: GCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCT...ACAGCTGACGGCTCCTTGAGAATGGATGACCCTAAAGGAGACTTCATCACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGTTCGCCCAGGATGCATaGCAGCAAAACCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRFAQDA*QQNQRG
Trigger: CCCCCTCTGGTTTTGCTGCCATGCATCCTGGGCGAA...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGTTCGCCCAGGATGCATaGCAGCAAAACCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQFAQDA*QQNQRG
Trigger: CCCCCTCTGGTTTTGCTGCCATGCATCCTGGGCGAA...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGAGCCTCACAGAGGTTaGTGCAGATGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQREPHRG*CRCQPR
Trigger: CCTGGGCTGACATCTGCACCAACCTCTGTGAGGCTC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGCTTGGAGGCTCTGCCTaGGACAGGAGTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRLGGSA*DRSHRQ
Trigger: CTGCCTATGACTCCTGTCCCAGGCAGAGCCTCCAAG...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGGAGGCTGAAGCCTGGTaGTGTAGTGGGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQEAEAW*CSGKGT
Trigger: TGTGCCCTTCCCACTACACCACCAGGCTTCAGCCTC...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGAGGCTGAAGCCTGGTaGTGTAGTGGGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQREAEAW*CSGKGT
Trigger: TGTGCCCTTCCCACTACACCACCAGGCTTCAGCCTC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCATTGGAGGCTGAAGCCTaGTGGTGTAGTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSLEAEA*WCSGKG
Trigger: GCCCTTCCCACTACACCACCAGGCTTCAGCCTCCAA...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGTGACCTCAACGACCTaGAACCTCCTGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRVTSTT*NLLTLA
Trigger: AGCCAGAGTCAGGAGGTTTCAGGTCGTTGAGGTCAC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGGGGAGTGTGACGGCATaGTCACATAGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQGSVTA*SHRRCW
Trigger: CCAGCACCTTCTATGTGATCATGCCGTCACACTCCC...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACGAGCTCGGTTGGTCTaGAACTGCCCAGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSRARLV*NCPVFL
Trigger: GAGAAAGACTGGGCAGTTGCAGACCAACCGAGCTCG...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GCGAGTAGGGATGGGCAGAGCAGTCGCTCTTGGAGATCACATTTCAGACACATTTTCGCCCAGGATGCATaGCAGCAAAACCAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ASRDGQSSRSWRSHFRHIFAQDA*QQNQRG
Trigger: CCCCCTCTGGTTTTGCTGCCATGCATCCTGGGCGAA...AATGTGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTGCCCATCCCTACTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CCA 90 bp ATGAACGGGAGTCCATATGTCAATGACTCGCAGAGCCCGCTAGATTTTAAAGCCACAGGGACATGCGGCTaGGGCCCATCAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MNGSPYVNDSQSPLDFKATGTCG*GPSSCR
Trigger: CCTGCAGCTTGATGGGCCCCAGCCGCATGTCCCTGT...GGCTTTAAAATCTAGCGGGCTCTGCGAGTCATTGACATATGGACTCCCGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGGCCGCCCCTGAGGCTTaGCATAGATGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEAAPEA*HRCCSG
Trigger: ACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGC...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGTGGATATGGTTAAGCTaGGCAGCTGGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQWIWLS*AAGLWC
Trigger: GCACCAGAGCCCAGCTGCCCAGCTTAACCATATCCA...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTTCCAGACTTGAGGAGTaGGACAGCACTGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSSRLEE*DSTETG
Trigger: TCCTGTTTCAGTGCTGTCCCACTCCTCAAGTCTGGA...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGCGACCTGAAACCTCCTaGCTCTGGCTAGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQRPETS*LWLGLY
Trigger: ATACAGACCTAGCCAGAGTCAGGAGGTTTCAGGTCG...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAGTAATGAGAGGCCGATaGCTGGGAAGCCATCTGGTA +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSVMRGR*LGSHLV
Trigger: TACCAGATGGCTTCCCAGTCATCGGCCTCTCATTAC...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGGAGTCCATATGTCAATaGCTCGCAGAGCCCGCTAGA +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQESICQ*LAEPAR
Trigger: TCTAGCGGGCTCTGCGAGTCATTGACATATGGACTC...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGACGCTGAGTCCACGTaGTCTAGGATTCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRDAEST*SRIPFV
Trigger: CACAAAGGGAATCCTAGAGCACGTGGACTCAGCGTC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGTCATCCCAGTCCAGCTaGCAACAGCTTGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQSSQSS*QQLVGL
Trigger: CAGACCTACAAGCTGTTGGCAGCTGGACTGGGATGA...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGCCAGTCTTGCAGGGATaGTTTCTCGGAGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEPVLQG*FLGARL
Trigger: GAGCCGAGCTCCGAGAAAGCATCCCTGCAAGACTGG...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290536.9
CDS-3UTR GCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGCGGTTGGTCTGCAACTaGCCAGTCTTGCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGERLVCN*PVLQGC
Trigger: GCATCCCTGCAAGACTGGGCAGTTGCAGACCAACCG...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290536.9
CDS-3UTR CCA 90 bp TGCCAACAGCTTGTAGGTCTGAGGATGAACGGGAGTCCATATGTCAATGACTCGGAGCCTCACAGAGGTTaGTGCAGATGTCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CQQLVGLRMNGSPYVNDSEPHRG*CRCQPR
Trigger: CCTGGGCTGACATCTGCACCAACCTCTGTGAGGCTC...CGAGTCATTGACATATGGACTCCCGTTCATCCTCAGACCTACAAGCTGTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CCA 90 bp TTAGGGTCATCCATTCTCAAGGAGCCGTCAGCTGTGCCAGCGAGTAGGGATGGGCAGAGCAGTCGCTCTTaGAGATCACATTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: LGSSILKEPSAVPASRDGQSSRS*RSHFRH
Trigger: GTGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTG...CCCATCCCTACTCGCTGGCACAGCTGACGGCTCCTTGAGAATGGATGACCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGCTGAGGAAGATTTGCTaGCTGCTGGCATCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQLRKIC*LLASWR
Trigger: CCTCCAAGATGCCAGCAGCCAGCAAATCTTCCTCAG...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGTTGGAGGCTGAAGCCTaGTGGTGTAGTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGELEAEA*WCSGKG
Trigger: GCCCTTCCCACTACACCACCAGGCTTCAGCCTCCAA...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGTGTGAGGGAGTGTaGCGGCATGATCACATAGAA +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSQCEGV*RHDHIE
Trigger: TTCTATGTGATCATGCCGTCACACTCCCTCACACTG...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGAAGGGCACAGGCTCTaGAATGAGGCTTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQREGHRL*NEAWIS
Trigger: TGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGGTATAGGTCAGAGCTaGCCTTGTGGTCACATGTCT +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRGIGQS*PCGHMS
Trigger: AGACATGTGACCACAAGGGCAGCTCTGACCTATACC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAGAGGCTTGGCATAGATaGTGCTCAGGTGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSEAWHR*CSGVST
Trigger: TGTACTCACACCTGAGCAGCATCTATGCCAAGCCTC...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGCATCTGAGGAAGATTTaGTGGCTGCTGGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQHLRKI*WLLASW
Trigger: CCAAGATGCCAGCAGCCAGCAAATCTTCCTCAGATG...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTGAAAATGAAAGTCCTTaGTGGAGAAAGGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSENESP*WRKDRL
Trigger: GAGCCTGTCCTTTCTCCAGCAAGGACTTTCATTTTC...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGCGGTTGGTCTGCAACTaGCCAGTCTTTCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGERLVCN*PVFLGA
Trigger: AGCTCCGAGAAAGACTGGGCAGTTGCAGACCAACCG...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGCACAATGAGAAGCCGTaGAGGTTGCTGGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRHNEKP*RLLVNL
Trigger: CAGATTGACCAGCAACCTCCACGGCTTCTCATTGTG...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTTATTGTTTGAATTGCTaGAGCCCATCCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSYCLNC*SPSSTA
Trigger: GGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATA...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGGCATCAGTTCCCGCGTaGCCACCGCCTTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLASVPA*PPPLPA
Trigger: TGCTGGTAAAGGCGGTGGCCACGCGGGAACTGATGC...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGTGGATATGGTTAAGCTaGGCAGCTGGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEWIWLS*AAGLWC
Trigger: GCACCAGAGCCCAGCTGCCCAGCTTAACCATATCCA...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAAAGCACTTGTCTCTTTaGAGGCTGAAGCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSKHLSL*RLKPGG
Trigger: ACCACCAGGCTTCAGCCTCCAAAGAGACAAGTGCTT...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGAAGCACTTGTCTCTTTaGAGGCTGAAGCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRKHLSL*RLKPGG
Trigger: ACCACCAGGCTTCAGCCTCCAAAGAGACAAGTGCTT...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTTCATTGTCTATAGTCTaGAGGTCAATGTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSSLSIV*RSMSVP
Trigger: GGGAACTGACATTGACCTTCAGACTATAGACAATGA...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGGTAATGAGAGGCCGATaGCTGGGAAGCCATCTGGTA +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEVMRGR*LGSHLV
Trigger: TACCAGATGGCTTCCCAGTCATCGGCCTCTCATTAC...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TGCCAACAGCTTGTAGGTCTGAGGATGAACGGGAGTCCATATGTCAATGACTCGGTAATGAGAGGCCGATaGCTGGGAAGCCATCTGGTA +
Preference number: 4 (lower is better)
Translates to: CQQLVGLRMNGSPYVNDSVMRGR*LGSHLV
Trigger: TACCAGATGGCTTCCCAGTCATCGGCCTCTCATTAC...CGAGTCATTGACATATGGACTCCCGTTCATCCTCAGACCTACAAGCTGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR TCA 90 bp AGTGTGATGAAGTCTCCTTTAGGGTCATCCATTCTCAAGGAGCCGTCAGCTGTGGAGTCCATATGTCAATaGCTCGCAGAGCCCGCTAGA +
Preference number: 4 (lower is better)
Translates to: SVMKSPLGSSILKEPSAVESICQ*LAEPAR
Trigger: TCTAGCGGGCTCTGCGAGTCATTGACATATGGACTC...CACAGCTGACGGCTCCTTGAGAATGGATGACCCTAAAGGAGACTTCATCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR TCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGGCATGGAAATGTTGCTaGTTTGTCTCCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQAWKCC*FVSSSS
Trigger: GGATGAGCTGGAGACAAATCAGCAACATTTCCATGC...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TGCCAACAGCTTGTAGGTCTGAGGATGAACGGGAGTCCATATGTCAATGACTCGGTAGTTCGCCCAGGATaGATGGCAGCAAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: CQQLVGLRMNGSPYVNDSVVRPG*MAAKPE
Trigger: CTCTGGTTTTGCTGCCATGCATCCTGGGCGAACTAC...CGAGTCATTGACATATGGACTCCCGTTCATCCTCAGACCTACAAGCTGTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR GCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCATCTGAGATGCAGGTCTaGAACCTAGCAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSSEMQV*NLAKFP
Trigger: AGGGAACTTTGCTAGGTTGCAGACCTGCATCTCAGA...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTCTGTATTGTTTGAATTaGTGGAGCCCATCCTCTACT +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSLYCLN*WSPSST
Trigger: AGTAGAGGATGGGCTCCAGCAATTCAAACAATACAG...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCAGGAGCCGTCAGCTGTaGCAGCGAGTAGGGATGGGC +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECRSRQL*QRVGMG
Trigger: GCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCT...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGGGAAGATTTGCTGGCTaGTGGCATCTTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEGRFAG*WHLGGS
Trigger: AGAGCCTCCAAGATGCCAGCAGCCAGCAAATCTTCC...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACTGACCTCATCCACCTaGTTACACAGAGCTACAAGA +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSLTSST*LHRATR
Trigger: TCTTGTAGCTCTGTGTAAGCAGGTGGATGAGGTCAG...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAACTGTAGCCACCAGCTaGATATTCTTTACACCGTGC +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSTVATS*IFFTPC
Trigger: GCACGGTGTAAAGAATATCCAGCTGGTGGCTACAGT...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290536.9
CDS-3UTR CCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCACAGGGACATGCGGCTaGGGCCCATCAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSTGTCG*GPSSCR
Trigger: CCTGCAGCTTGATGGGCCCCAGCCGCATGTCCCTGT...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TTCTCAAGGAGCCGTCAGCTGTGCCAGCGAGTAGGGATGGGCAGAGCAGTCGCTAGATGGATTTGTTCTTaGTCTGTTCCACTGTTATGT +
Preference number: 4 (lower is better)
Translates to: FSRSRQLCQRVGMGRAVARWICS*SVPLLC
Trigger: ACATAACAGTGGAACAGACCAAGAACAAATCCATCT...AGCGACTGCTCTGCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCTTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGCAGTCGCTCTTaGAGATCACATTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSQSSRS*RSHFRH
Trigger: GTGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTG...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGCAGAGCAGTCGCTCTTaGAGATCACATTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRQSSRS*RSHFRH
Trigger: GTGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTG...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGCTGAGGAAGATTTGCTaGCTGCTGGCATCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGELRKIC*LLASWR
Trigger: CCTCCAAGATGCCAGCAGCCAGCAAATCTTCCTCAG...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGGAAGGTTGGTACATGTaGGGAGAGGGTAACAGGAAA +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQEGWYM*GEGNRK
Trigger: TTTCCTGTTACCCTCTCCCCACATGTACCAACCTTC...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTAGGATGCACTCATGCTaGTCTTGTACCATGTATAAA +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSRMHSC*SCTMYK
Trigger: TTTATACATGGTACAAGATCAGCATGAGTGCATCCT...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAAGCACCTTGTGATCTaGAACACCCTTCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQKHLVI*NTLLSV
Trigger: TACAGAGAGAAGGGTGTTTCAGATCACAAGGTGCTT...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGCTAGGATTCCCTTTGTaGCCTCAACGACCTGAAACC +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGELGFPL*PQRPET
Trigger: GGTTTCAGGTCGTTGAGGTCACAAAGGGAATCCTAG...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACTTTTCAGCAGGCTGTaGCACAAAGCATGGAAATGT +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSLFSRL*HKAWKC
Trigger: ACATTTCCATGCTTTGTGTCACAGCCTGCTGAAAAG...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGCTTTTCAGCAGGCTGTaGCACAAAGCATGGAAATGT +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRLFSRL*HKAWKC
Trigger: ACATTTCCATGCTTTGTGTCACAGCCTGCTGAAAAG...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGGGCTCTGGTGCTGGTaGCTTAGGGCCTTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECGLWCW*LRALRD
Trigger: ATCCCTCAAGGCCCTAAGTCACCAGCACCAGAGCCC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGGATAGAGAGCAAGTCTaGCCACAGATAGCCATTATG +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQDREQV*PQIAIM
Trigger: CATAATGGCTATCTGTGGTCAGACTTGCTCTCTATC...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGGAAGGGCACAGGCTCTaGAATGAGGCTTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEEGHRL*NEAWIS
Trigger: TGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTC...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGAAAATGAAAGTCCTTaGTGGAGAAAGGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRENESP*WRKDRL
Trigger: GAGCCTGTCCTTTCTCCAGCAAGGACTTTCATTTTC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAGAAAATGAAAGTCCTTaGTGGAGAAAGGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSENESP*WRKDRL
Trigger: GAGCCTGTCCTTTCTCCAGCAAGGACTTTCATTTTC...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGCACAATGAGAAGCCGTaGAGGTTGCTGGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEHNEKP*RLLVNL
Trigger: CAGATTGACCAGCAACCTCCACGGCTTCTCATTGTG...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGTATTGTTTGAATTGCTaGAGCCCATCCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQYCLNC*SPSSTA
Trigger: GGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATA...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGAACTCTCATCATTGCTaGTATCCTCAACAGGAGACG +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRNSHHC*YPQQET
Trigger: CGTCTCCTGTTGAGGATACCAGCAATGATGAGAGTT...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAAACTCTCATCATTGCTaGTATCCTCAACAGGAGACG +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSNSHHC*YPQQET
Trigger: CGTCTCCTGTTGAGGATACCAGCAATGATGAGAGTT...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTACATTTCAGACACATTaGATTATCTCTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSTFQTH*IISGSG
Trigger: TCCAGACCCAGAGATAATCCAATGTGTCTGAAATGT...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGCATCAGTTCCCGCGTaGCCACCGCCTTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECASVPA*PPPLPA
Trigger: TGCTGGTAAAGGCGGTGGCCACGCGGGAACTGATGC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGCATCAGTTCCCGCGTaGCCACCGCCTTTACCAGCA +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSASVPA*PPPLPA
Trigger: TGCTGGTAAAGGCGGTGGCCACGCGGGAACTGATGC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGCAAGGGGTTGTAGGTaGGCTCCAGCTCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSARGCR*APAPGC
Trigger: ACAGCCTGGAGCTGGAGCCCACCTACAACCCCTTGC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGCCGCCCCTGAGGCTTaGCATAGATGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECAAPEA*HRCCSG
Trigger: ACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGCCGCCCCTGAGGCTTaGCATAGATGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSAAPEA*HRCCSG
Trigger: ACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTGGCTGCTGGCATCTTaGAGGCTCTGCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSWLLAS*RLCLGQ
Trigger: CTGTCCCAGGCAGAGCCTCCAAGATGCCAGCAGCCA...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCTGGCTGCTGGCATCTTaGAGGCTCTGCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECWLLAS*RLCLGQ
Trigger: CTGTCCCAGGCAGAGCCTCCAAGATGCCAGCAGCCA...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAGTAGCTATTATTCTGTaGATGGAGGGAGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSVAIIL*MEGATG
Trigger: TCCTGTTGCTCCCTCCATCCACAGAATAATAGCTAC...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGACTGTAGCCACCAGCTaGATATTCTTTACACCTGTC +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQTVATS*IFFTPV
Trigger: GACAGGTGTAAAGAATATCCAGCTGGTGGCTACAGT...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536235.5
CDS-3UTR TCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGCGACCTGAAACCTCCTaGCTCTGGCTAGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLRPETS*LWLGLY
Trigger: ATACAGACCTAGCCAGAGTCAGGAGGTTTCAGGTCG...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGTCATTGTCTATAGTCTaGAGGTCAATGTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQSLSIV*RSMSVP
Trigger: GGGAACTGACATTGACCTTCAGACTATAGACAATGA...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGGAGTGGGACAGCACTaGAACAGGACAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECGVGQH*NRTGRL
Trigger: CAGCCTTCCTGTCCTGTTTCAGTGCTGTCCCACTCC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGGAGTGGGACAGCACTaGAACAGGACAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSGVGQH*NRTGRL
Trigger: CAGCCTTCCTGTCCTGTTTCAGTGCTGTCCCACTCC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGTCTGAGATGCAGGTCTaGAACCTAGCAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGESEMQV*NLAKFP
Trigger: AGGGAACTTTGCTAGGTTGCAGACCTGCATCTCAGA...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGCTGTATTGTTTGAATTaGTGGAGCCCATCCTCTACT +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQLYCLN*WSPSST
Trigger: AGTAGAGGATGGGCTCCAGCAATTCAAACAATACAG...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGGACGCTGAGTCCACGTaGTCTAGGATTCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLDAEST*SRIPFV
Trigger: CACAAAGGGAATCCTAGAGCACGTGGACTCAGCGTC...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCCGAGCTCGGTTGGTCTaGAACTGCCCAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECRARLV*NCPVLQ
Trigger: CTGCAAGACTGGGCAGTTGCAGACCAACCGAGCTCG...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290536.9
CDS-3UTR GCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGCTGACCTCATCCACCTaGTTACACAGAGCTACAAGA +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGELTSST*LHRATR
Trigger: TCTTGTAGCTCTGTGTAAGCAGGTGGATGAGGTCAG...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GTCCTTGCTGGAGAAAGGACAGGCTCGGGTGTGTCGCTTCCAGACTTGAGGAGTAGATGGATTTGTTCTTaGTCTGTTCCACTGTTATGT +
Preference number: 4 (lower is better)
Translates to: VLAGERTGSGVSLPDLRSRWICS*SVPLLC
Trigger: ACATAACAGTGGAACAGACCAAGAACAAATCCATCT...ACTCCTCAAGTCTGGAAGCGACACACCCGAGCCTGTCCTTTCTCCAGCAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGCAAGGGGTTGTAGGTaGGCTCCAGCTCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGARGCR*APAPGC
Trigger: ACAGCCTGGAGCTGGAGCCCACCTACAACCCCTTGC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCTCGGCTCTCCCAGTGTaGGTGGAGCCGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLSALPV*VEPPLR
Trigger: CCTCAGGGGCGGCTCCACCCACACTGGGAGAGCCGA...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCCTTGGAGGCTCTGCCTaGGACAGGAGTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSLGGSA*DRSHRQ
Trigger: CTGCCTATGACTCCTGTCCCAGGCAGAGCCTCCAAG...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTTGGCTGCTGGCATCTTaGAGGCTCTGCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGWLLAS*RLCLGQ
Trigger: CTGTCCCAGGCAGAGCCTCCAAGATGCCAGCAGCCA...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGCTGAGGAAGATTTGCTaGCTGCTGGCATCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLLRKIC*LLASWR
Trigger: CCTCCAAGATGCCAGCAGCCAGCAAATCTTCCTCAG...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTGGAGGCTGAAGCCTaGTGGTGTAGTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSLEAEA*WCSGKG
Trigger: GCCCTTCCCACTACACCACCAGGCTTCAGCCTCCAA...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGGAGCAACAGGAAGGTTaGTACATGTGGGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLEQQEG*YMWGEG
Trigger: ACCCTCTCCCCACATGTACCAACCTTCCTGTTGCTC...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGAGGATGCACTCATGCTaGTCTTGTACCATGTATAAA +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRRMHSC*SCTMYK
Trigger: TTTATACATGGTACAAGATCAGCATGAGTGCATCCT...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAAGGATGCACTCATGCTaGTCTTGTACCATGTATAAA +
Preference number: 4 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSRMHSC*SCTMYK
Trigger: TTTATACATGGTACAAGATCAGCATGAGTGCATCCT...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGAAGCACCTTGTGATCTaGAACACCCTTCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEKHLVI*NTLLSV
Trigger: TACAGAGAGAAGGGTGTTTCAGATCACAAGGTGCTT...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGTGACCTCAACGACCTaGAACCTCCTGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSVTSTT*NLLTLA
Trigger: AGCCAGAGTCAGGAGGTTTCAGGTCGTTGAGGTCAC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGTGACCTCAACGACCTaGAACCTCCTGACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECVTSTT*NLLTLA
Trigger: AGCCAGAGTCAGGAGGTTTCAGGTCGTTGAGGTCAC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGCCTCATCCTTGTTCCTaGGGTCCAGTTTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLPHPCS*GPVYQR
Trigger: CCTTTGGTAAACTGGACCTCAGGAACAAGGATGAGG...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGGCACAAAAGGGAGGATaGACTCATGCTGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEAQKGG*THADLV
Trigger: TACAAGATCAGCATGAGTGCATCCTCCCTTTTGTGC...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCCGAGCTCGGTTGGTCTaGAACTGCCCAGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSRARLV*NCPVFL
Trigger: GAGAAAGACTGGGCAGTTGCAGACCAACCGAGCTCG...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGTATTGTTTGAATTGCTaGAGCCCATCCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEYCLNC*SPSSTA
Trigger: GGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATA...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTGGATATGGTTAAGCTaGGCAGCTGGGCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSWIWLS*AAGLWC
Trigger: GCACCAGAGCCCAGCTGCCCAGCTTAACCATATCCA...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGTGTGATGAAGTCTCCTTTAGGGTCATCCATTCTCAAGGAGCCGTCAGCTGTGACTGTAGCCACCAGCTaGATATTCTTTACACCTGTC +
Preference number: 4 (lower is better)
Translates to: SVMKSPLGSSILKEPSAVTVATS*IFFTPV
Trigger: GACAGGTGTAAAGAATATCCAGCTGGTGGCTACAGT...CACAGCTGACGGCTCCTTGAGAATGGATGACCCTAAAGGAGACTTCATCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR TCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGAGCAATGTGCACAATaGGAAGCCGTGGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECEQCAQ*EAVEVA
Trigger: AGCAACCTCCACGGCTTCTCATTGTGCACATTGCTC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GTAGAGTGTGATGAAGTCTCCTTTAGGGTCATCCATTCTCAAGGAGCCGTCAGCTCATTGTCTATAGTCTaGAGGTCAATGTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: VECDEVSFRVIHSQGAVSSLSIV*RSMSVP
Trigger: GGGAACTGACATTGACCTTCAGACTATAGACAATGA...GCTGACGGCTCCTTGAGAATGGATGACCCTAAAGGAGACTTCATCACACTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR TCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGAGTCCATATGTCAATaGCTCGCAGAGCCCGCTAGA +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECESICQ*LAEPAR
Trigger: TCTAGCGGGCTCTGCGAGTCATTGACATATGGACTC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGAGTCCATATGTCAATaGCTCGCAGAGCCCGCTAGA +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSESICQ*LAEPAR
Trigger: TCTAGCGGGCTCTGCGAGTCATTGACATATGGACTC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGGGAGTGTGACGGCATaGTCACATAGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGGSVTA*SHRRCW
Trigger: CCAGCACCTTCTATGTGATCATGCCGTCACACTCCC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGCTTACTTGTCTTTTATaGGCTTTCAAAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRLTCLL*AFKTSS
Trigger: GGATGAGGTTTTGAAAGCTCATAAAAGACAAGTAAG...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGCTTACTTGTCTTTTATaGGCTTTCAAAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQLTCLL*AFKTSS
Trigger: GGATGAGGTTTTGAAAGCTCATAAAAGACAAGTAAG...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGTAGTTCGCCCAGGATaGATGGCAGCAAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECVVRPG*MAAKPE
Trigger: CTCTGGTTTTGCTGCCATGCATCCTGGGCGAACTAC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGTAGTTCGCCCAGGATaGATGGCAGCAAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSVVRPG*MAAKPE
Trigger: CTCTGGTTTTGCTGCCATGCATCCTGGGCGAACTAC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGAGAGAGAAGAAGTTCTaGAGAGCCTCACAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLREKKF*RASQRL
Trigger: CAACCTCTGTGAGGCTCTGCAGAACTTCTTCTCTCT...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGGAAGATTTGCTGGCTaGTGGCATCTTGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSGRFAG*WHLGGS
Trigger: AGAGCCTCCAAGATGCCAGCAGCCAGCAAATCTTCC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp AGTGTGATGAAGTCTCCTTTAGGGTCATCCATTCTCAAGGAGCCGTCAGCTGTGTCACAAAAGGGAGGATaGACTCATGCTGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: SVMKSPLGSSILKEPSAVSQKGG*THADLV
Trigger: TACAAGATCAGCATGAGTGCATCCTCCCTTTTGTGA...CACAGCTGACGGCTCCTTGAGAATGGATGACCCTAAAGGAGACTTCATCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCACAGGGACATGCGGCTaGGGCCCATCAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLTGTCG*GPSSCR
Trigger: CCTGCAGCTTGATGGGCCCCAGCCGCATGTCCCTGT...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGATGGATTTGTTCTTaGTCTGTTCCACTGTTATGT +
Preference number: 4 (lower is better)
Translates to: STETGQEGCCFPVSPHSQRWICS*SVPLLC
Trigger: ACATAACAGTGGAACAGACCAAGAACAAATCCATCT...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCTCTCTGGCTGTGTCCTaGGCCCGGTGGTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLSLAVS*ARWFPL
Trigger: AAGGGGGAACCACCGGGCCCAGGACACAGCCAGAGA...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGGAAGGTTGGTACATGTaGGGAGAGGGTAACAGGAAA +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLEGWYM*GEGNRK
Trigger: TTTCCTGTTACCCTCTCCCCACATGTACCAACCTTC...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGAGCAACAGGAAGGTTaGTACATGTGGGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSEQQEG*YMWGEG
Trigger: ACCCTCTCCCCACATGTACCAACCTTCCTGTTGCTC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGTACCATGTATAAACTaGACAGGGACATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSVPCIN*TGTCGW
Trigger: CCAGCCGCATGTCCCTGTTCAGTTTATACATGGTAC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TGCCAACAGCTTGTAGGTCTGAGGATGAACGGGAGTCCATATGTCAATGACTCGAGGATGCACTCATGCTaGTCTTGTACCATGTATAAA +
Preference number: 4 (lower is better)
Translates to: CQQLVGLRMNGSPYVNDSRMHSC*SCTMYK
Trigger: TTTATACATGGTACAAGATCAGCATGAGTGCATCCT...CGAGTCATTGACATATGGACTCCCGTTCATCCTCAGACCTACAAGCTGTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR TCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTCGACCTGAAACCTCCTaGCTCTGGCTAGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGRPETS*LWLGLY
Trigger: ATACAGACCTAGCCAGAGTCAGGAGGTTTCAGGTCG...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCCTAGGATTCCCTTTGTaGCCTCAACGACCTGAAACC +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECLGFPL*PQRPET
Trigger: GGTTTCAGGTCGTTGAGGTCACAAAGGGAATCCTAG...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCCAGTGTGAGGGAGTGTaGCGGCATGATCACATAGAA +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSQCEGV*RHDHIE
Trigger: TTCTATGTGATCATGCCGTCACACTCCCTCACACTG...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGATGCTGCTCAGGTGTaGGTACAGGTGGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGDAAQV*VQVALN
Trigger: GTTCAAAGCCACCTGTACTCACACCTGAGCAGCATC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGGCACAAAAGGGAGGATaGACTCATGCTGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLAQKGG*THADLV
Trigger: TACAAGATCAGCATGAGTGCATCCTCCCTTTTGTGC...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGGTATAGGTCAGAGCTaGCCTTGTGGTCACATGTCT +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECGIGQS*PCGHMS
Trigger: AGACATGTGACCACAAGGGCAGCTCTGACCTATACC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGACGCTGAGTCCACGTaGTCTAGGATTCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGDAEST*SRIPFV
Trigger: CACAAAGGGAATCCTAGAGCACGTGGACTCAGCGTC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTTCATCCCAGTCCAGCTaGCAACAGCTTGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGSSQSS*QQLVGL
Trigger: CAGACCTACAAGCTGTTGGCAGCTGGACTGGGATGA...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGAGGCTTGGCATAGATaGTGCTCAGGTGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSEAWHR*CSGVST
Trigger: TGTACTCACACCTGAGCAGCATCTATGCCAAGCCTC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CTTGGAGATCACATTTCAGACACATTGGATTATCTCTGGGTCTGGAAATGTTGCCACAATGAGAAGCCGTaGAGGTTGCTGGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LGDHISDTLDYLWVWKCCHNEKP*RLLVNL
Trigger: CAGATTGACCAGCAACCTCCACGGCTTCTCATTGTG...GCAACATTTCCAGACCCAGAGATAATCCAATGTGTCTGAAATGTGATCTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGACATTTCAGACACATTaGATTATCTCTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGETFQTH*IISGSG
Trigger: TCCAGACCCAGAGATAATCCAATGTGTCTGAAATGT...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TGCCAACAGCTTGTAGGTCTGAGGATGAACGGGAGTCCATATGTCAATGACTCGACATTTCAGACACATTaGATTATCTCTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: CQQLVGLRMNGSPYVNDSTFQTH*IISGSG
Trigger: TCCAGACCCAGAGATAATCCAATGTGTCTGAAATGT...CGAGTCATTGACATATGGACTCCCGTTCATCCTCAGACCTACAAGCTGTTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGAGCAACAGGAAGGTTaGTACATGTGGGGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGEQQEG*YMWGEG
Trigger: ACCCTCTCCCCACATGTACCAACCTTCCTGTTGCTC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGTCTGCTGTATTGTTTaGATTGCTGGAGCCCATCCT +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSVCCIV*IAGAHP
Trigger: AGGATGGGCTCCAGCAATTCAAACAATACAGCAGAC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTCAGTGTGAGGGAGTGTaGCGGCATGATCACATAGAA +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGQCEGV*RHDHIE
Trigger: TTCTATGTGATCATGCCGTCACACTCCCTCACACTG...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGAAGGGCACAGGCTCTaGAATGAGGCTTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGEGHRL*NEAWIS
Trigger: TGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGCTGTATTGTTTGAATTaGTGGAGCCCATCCTCTACT +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLLYCLN*WSPSST
Trigger: AGTAGAGGATGGGCTCCAGCAATTCAAACAATACAG...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCCTGACCTCATCCACCTaGTTACACAGAGCTACAAGA +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSLTSST*LHRATR
Trigger: TCTTGTAGCTCTGTGTAAGCAGGTGGATGAGGTCAG...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTCACAATGAGAAGCCGTaGAGGTTGCTGGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGHNEKP*RLLVNL
Trigger: CAGATTGACCAGCAACCTCCACGGCTTCTCATTGTG...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGAGATGGATTTGTTCTTaGTCTGTTCCACTGTTATGT +
Preference number: 4 (lower is better)
Translates to: LLFCGWREQQEGWYMWGERWICS*SVPLLC
Trigger: ACATAACAGTGGAACAGACCAAGAACAAATCCATCT...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCCAGAGCAGTCGCTCTTaGAGATCACATTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECQSSRS*RSHFRH
Trigger: GTGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTG...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGAGGCTGAAGCCTGGTaGTGTAGTGGGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLEAEAW*CSGKGT
Trigger: TGTGCCCTTCCCACTACACCACCAGGCTTCAGCCTC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTAAGCACTTGTCTCTTTaGAGGCTGAAGCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGKHLSL*RLKPGG
Trigger: ACCACCAGGCTTCAGCCTCCAAAGAGACAAGTGCTT...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGCATGGAAATGTTGCTaGTTTGTCTCCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGAWKCC*FVSSSS
Trigger: GGATGAGCTGGAGACAAATCAGCAACATTTCCATGC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCCTTTTCAGCAGGCTGTaGCACAAAGCATGGAAATGT +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECLFSRL*HKAWKC
Trigger: ACATTTCCATGCTTTGTGTCACAGCCTGCTGAAAAG...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGGGAGTGTGACGGCATaGTCACATAGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLGSVTA*SHRRCW
Trigger: CCAGCACCTTCTATGTGATCATGCCGTCACACTCCC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGATAGAGAGCAAGTCTaGCCACAGATAGCCATTATG +
Preference number: 4 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSDREQV*PQIAIM
Trigger: CATAATGGCTATCTGTGGTCAGACTTGCTCTCTATC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGATAGAGAGCAAGTCTaGCCACAGATAGCCATTATG +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECDREQV*PQIAIM
Trigger: CATAATGGCTATCTGTGGTCAGACTTGCTCTCTATC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGCACAAAAGGGAGGATaGACTCATGCTGATCTTGTA +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECAQKGG*THADLV
Trigger: TACAAGATCAGCATGAGTGCATCCTCCCTTTTGTGC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCAAGTTCCCTTTCACTTaGACAAAAGGGAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECKFPFT*TKGRMH
Trigger: GTGCATCCTCCCTTTTGTGCAAGTGAAAGGGAACTT...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGATGGTAGAAGCTTACTaGGTGTTTAATCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLMVEAY*VFNLHL
Trigger: CAGGTGAAGATTAAACACCCAGTAAGCTTCTACCAT...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGAAGGTTGGTACATGTaGGGAGAGGGTAACAGGAAA +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGEGWYM*GEGNRK
Trigger: TTTCCTGTTACCCTCTCCCCACATGTACCAACCTTC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGAGCAATGTGCACAATaGGAAGCCGTGGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLEQCAQ*EAVEVA
Trigger: AGCAACCTCCACGGCTTCTCATTGTGCACATTGCTC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGATGCTGCTCAGGTGTaGGTACAGGTGGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLDAAQV*VQVALN
Trigger: GTTCAAAGCCACCTGTACTCACACCTGAGCAGCATC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTAAGTTCCCTTTCACTTaGACAAAAGGGAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGKFPFT*TKGRMH
Trigger: GTGCATCCTCCCTTTTGTGCAAGTGAAAGGGAACTT...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCTCATCCCAGTCCAGCTaGCAACAGCTTGTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLSSQSS*QQLVGL
Trigger: CAGACCTACAAGCTGTTGGCAGCTGGACTGGGATGA...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTGTAGCTATTATTCTGTaGATGGAGGGAGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGVAIIL*MEGATG
Trigger: TCCTGTTGCTCCCTCCATCCACAGAATAATAGCTAC...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGGTATAGGTCAGAGCTaGCCTTGTGGTCACATGTCT +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLGIGQS*PCGHMS
Trigger: AGACATGTGACCACAAGGGCAGCTCTGACCTATACC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGAGGCTTGGCATAGATaGTGCTCAGGTGTGAGTACA +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLEAWHR*CSGVST
Trigger: TGTACTCACACCTGAGCAGCATCTATGCCAAGCCTC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCACATTTCAGACACATTaGATTATCTCTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PHPPAYTELQEEILSYECTFQTH*IISGSG
Trigger: TCCAGACCCAGAGATAATCCAATGTGTCTGAAATGT...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCTCCAGACTTGAGGAGTaGGACAGCACTGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLSRLEE*DSTETG
Trigger: TCCTGTTTCAGTGCTGTCCCACTCCTCAAGTCTGGA...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGCATGGAAATGTTGCTaGTTTGTCTCCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLAWKCC*FVSSSS
Trigger: GGATGAGCTGGAGACAAATCAGCAACATTTCCATGC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCAGAGAGAAGAAGTTCTaGAGAGCCTCACAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLREKKF*RASQRL
Trigger: CAACCTCTGTGAGGCTCTGCAGAACTTCTTCTCTCT...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR GCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCTCTGAGATGCAGGTCTaGAACCTAGCAAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLSEMQV*NLAKFP
Trigger: AGGGAACTTTGCTAGGTTGCAGACCTGCATCTCAGA...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTATGGTAGAAGCTTACTaGGTGTTTAATCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGMVEAY*VFNLHL
Trigger: CAGGTGAAGATTAAACACCCAGTAAGCTTCTACCAT...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR TCA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTCTTACTTGTCTTTTATaGGCTTTCAAAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGLTCLL*AFKTSS
Trigger: GGATGAGGTTTTGAAAGCTCATAAAAGACAAGTAAG...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGTAGCTATTATTCTGTaGATGGAGGGAGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLVAIIL*MEGATG
Trigger: TCCTGTTGCTCCCTCCATCCACAGAATAATAGCTAC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CCA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCATGGTAGAAGCTTACTaGGTGTTTAATCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLMVEAY*VFNLHL
Trigger: CAGGTGAAGATTAAACACCCAGTAAGCTTCTACCAT...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS CCA 90 bp CCCAGTCTTGCAGGGATGCTTTCTCGGAGCTCGGCTCTCCCAGTGTaGGTGGAGCCGCCCCTGAGGCTTGGCATAGATGCTGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: PSLAGMLSRSSALPV*VEPPLRLGIDAAQV
Trigger: CACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCACACTGGGAGAGCCGAGCTCCGAGAAAGCATCCCTGCAAGACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290536.9
ENST00000421985.2
CDS CCA 90 bp GGTCTGCAACTGCCCAGTCTTTCTCGGAGCTCGGCTCTCCCAGTGTaGGTGGAGCCGCCCCTGAGGCTTGGCATAGATGCTGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: GLQLPSLSRSSALPV*VEPPLRLGIDAAQV
Trigger: CACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCACACTGGGAGAGCCGAGCTCCGAGAAAGACTGGGCAGTTGCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409585.5
ENST00000464686.5
ENST00000536235.5
CDS GCA 90 bp GGCTCTCCCAGTGTGGGTGGAGCCGCCCCTGAGGCTTGGCATAGATaGTGCTCAGGTGTGAGTACAGGTGGCTTTGAACATGCAAGGGGT +
Preference number: 5 (lower is better)
Translates to: GSPSVGGAAPEAWHR*CSGVSTGGFEHARG
Trigger: ACCCCTTGCATGTTCAAAGCCACCTGTACTCACACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCACACTGGGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS CCA 90 bp TCGGAGCTCGGCTCTCCCAGTGTGGGTGGAGCCGCCCCTGAGGCTTaGCATAGATGCTGCTCAGGTGTGAGTACAGGTGGCTTTGAACAT +
Preference number: 5 (lower is better)
Translates to: SELGSPSVGGAAPEA*HRCCSGVSTGGFEH
Trigger: ATGTTCAAAGCCACCTGTACTCACACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCACACTGGGAGAGCCGAGCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS TCA 90 bp TGGGTGGAGCCGCCCCTGAGGCTTGGCATAGATGCTGCTCAGGTGTaGGTACAGGTGGCTTTGAACATGCAAGGGGTTGTAGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: WVEPPLRLGIDAAQV*VQVALNMQGVVGGL
Trigger: GAGCCCACCTACAACCCCTTGCATGTTCAAAGCCACCTGTACTCACACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS GCA 90 bp ATGCGGCTGGGGCCCATCAAGCTGCAGGCTAGAGAGAAGAAGTTCTaGAGAGCCTCACAGAGGTTGGTGCAGATGTCAGCCCAGGACGGT +
Preference number: 5 (lower is better)
Translates to: MRLGPIKLQAREKKF*RASQRLVQMSAQDG
Trigger: ACCGTCCTGGGCTGACATCTGCACCAACCTCTGTGAGGCTCTGCAGAACTTCTTCTCTCTAGCCTGCAGCTTGATGGGCCCCAGCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000438226.5
ENST00000536235.5
CDS CCA 90 bp AGGATGCATGGCAGCAAAACCAGAGGGGGAACTGTAGCCACCAGCTaGATATTCTTTACACCGTGCCTGGCGGATCAGCAGCCCGGCCCT +
Preference number: 5 (lower is better)
Translates to: RMHGSKTRGGTVATS*IFFTPCLADQQPGP
Trigger: AGGGCCGGGCTGCTGATCCGCCAGGCACGGTGTAAAGAATATCCAGCTGGTGGCTACAGTTCCCCCTCTGGTTTTGCTGCCATGCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290536.9
CDS GCA 90 bp TCTCCCAGTGTGGGTGGAGCCGCCCCTGAGGCTTGGCATAGATGCTaGTCAGGTGTGAGTACAGGTGGCTTTGAACATGCAAGGGGTTGT +
Preference number: 5 (lower is better)
Translates to: SPSVGGAAPEAWHRC*SGVSTGGFEHARGC
Trigger: ACAACCCCTTGCATGTTCAAAGCCACCTGTACTCACACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCACACTGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS CCA 90 bp TGGCAGGAATTCTCTGGCTGTGTCCTGGGCCCGGTGGTTCCCCCTTaGCTAACAGCAGCCATTCCCTTTTCAGCAGGCTGTGACACAAAG +
Preference number: 5 (lower is better)
Translates to: WQEFSGCVLGPVVPP*LTAAIPFSAGCDTK
Trigger: CTTTGTGTCACAGCCTGCTGAAAAGGGAATGGCTGCTGTTAGCCAAGGGGGAACCACCGGGCCCAGGACACAGCCAGAGAATTCCTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS-3UTR CAA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGCCCGGTGGTTCCCCCTaGGCTAACAGCAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRPGGSP*ANSSHS
Trigger: GGAATGGCTGCTGTTAGCCAAGGGGGAACCACCGGG...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGCCCGGTGGTTCCCCCTaGGCTAACAGCAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEPGGSP*ANSSHS
Trigger: GGAATGGCTGCTGTTAGCCAAGGGGGAACCACCGGG...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAGTGTCGCTTCCAGACTaGAGGAGTGGGACAGCACTG +
Preference number: 5 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSVSLPD*RSGTAL
Trigger: CAGTGCTGTCCCACTCCTCAAGTCTGGAAGCGACAC...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS TCA 90 bp GGAGCCCATCCTCTACTGCCAGCCGCAGAGAAGCACCTTGTGATCTaGAACACCCTTCTCTCTGTAACATGCGGAGTTCTGAGATGCAGG +
Preference number: 5 (lower is better)
Translates to: GAHPLLPAAEKHLVI*NTLLSVTCGVLRCR
Trigger: CCTGCATCTCAGAACTCCGCATGTTACAGAGAGAAGGGTGTTTCAGATCACAAGGTGCTTCTCTGCGGCTGGCAGTAGAGGATGGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS-3UTR CAA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGAGGTCAGAGCTGCCCTaGTGGTCACATGTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRRSELP*WSHVCC
Trigger: ACAGCAGACATGTGACCACAAGGGCAGCTCTGACCT...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp AAGGAGCCGTCAGCTGTGCCAGCGAGTAGGGATGGGCAGAGCAGTCGCTCTTGGTTATGTAGCCAGGCTTaGAAGAAAATCTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: KEPSAVPASRDGQSSRSWLCSQA*KKISML
Trigger: CAGCATGGAGATTTTCTTCAAAGCCTGGCTACATAA...CCAAGAGCGACTGCTCTGCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CAA 90 bp GGGTCATCCATTCTCAAGGAGCCGTCAGCTGTGCCAGCGAGTAGGGATGGGCAGCACATTTCAGACACATaGGATTATCTCTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GSSILKEPSAVPASRDGQHISDT*DYLWVW
Trigger: CCAGACCCAGAGATAATCCAATGTGTCTGAAATGTG...CTGCCCATCCCTACTCGCTGGCACAGCTGACGGCTCCTTGAGAATGGATGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS GCA 90 bp GTCAGAGCTGCCCTTGTGGTCACATGTCTGCTGTATTGTTTGAATTaGTGGAGCCCATCCTCTACTGCCAGCCGCAGAGAAGCACCTTGT +
Preference number: 5 (lower is better)
Translates to: VRAALVVTCLLYCLN*WSPSSTASRREAPC
Trigger: ACAAGGTGCTTCTCTGCGGCTGGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGCAGCTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS-3UTR CAA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGCCCGGTGGTTCCCCCTaGGCTAACAGCAGCCATTCC +
Preference number: 5 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLPGGSP*ANSSHS
Trigger: GGAATGGCTGCTGTTAGCCAAGGGGGAACCACCGGG...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACCCAGCACACACACTTaGCATGTAGGTACCAAGCAC +
Preference number: 5 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSPSTHT*HVGTKH
Trigger: GTGCTTGGTACCTACATGCAAAGTGTGTGTGCTGGG...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS TCA 90 bp CAAAAGGGAGGATGCACTCATGCTGATCTTGTACCATGTATAAACTaGACAGGGACATGCGGCTGGGGCCCATCAAGCTGCAGGCTAGAG +
Preference number: 5 (lower is better)
Translates to: QKGGCTHADLVPCIN*TGTCGWGPSSCRLE
Trigger: CTCTAGCCTGCAGCTTGATGGGCCCCAGCCGCATGTCCCTGTTCAGTTTATACATGGTACAAGATCAGCATGAGTGCATCCTCCCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000438226.5
ENST00000536235.5
CDS TCA 90 bp TATAGGTCAGAGCTGCCCTTGTGGTCACATGTCTGCTGTATTGTTTaGATTGCTGGAGCCCATCCTCTACTGCCAGCCGCAGAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: YRSELPLWSHVCCIV*IAGAHPLLPAAEKH
Trigger: GTGCTTCTCTGCGGCTGGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGCAGCTCTGACCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS TCA 90 bp GCTGAGTCCACGTGCTCTAGGATTCCCTTTGTGACCTCAACGACCTaGAACCTCCTGACTCTGGCTAGGTCTGTATCTTTCAACCCTTCC +
Preference number: 5 (lower is better)
Translates to: AESTCSRIPFVTSTT*NLLTLARSVSFNPS
Trigger: GGAAGGGTTGAAAGATACAGACCTAGCCAGAGTCAGGAGGTTTCAGGTCGTTGAGGTCACAAAGGGAATCCTAGAGCACGTGGACTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000536235.5
CDS CCA 90 bp AGAGCTGCCCTTGTGGTCACATGTCTGCTGTATTGTTTGAATTGCTaGAGCCCATCCTCTACTGCCAGCCGCAGAGAAGCACCTTGTGAT +
Preference number: 5 (lower is better)
Translates to: RAALVVTCLLYCLNC*SPSSTASRREAPCD
Trigger: ATCACAAGGTGCTTCTCTGCGGCTGGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS-3UTR CAA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGAGGTCAGAGCTGCCCTaGTGGTCACATGTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: LLFCGWREQQEGWYMWGERSELP*WSHVCC
Trigger: ACAGCAGACATGTGACCACAAGGGCAGCTCTGACCT...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAGCAGAGCAGTCGCTCTaGGAGATCACATTTCAGACA +
Preference number: 5 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSAEQSL*EITFQT
Trigger: TGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTGC...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGAGGACAGGAAGGCTGTaGTTTCCCAGTCAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: LLFCGWREQQEGWYMWGERTGRL*FPSQPS
Trigger: TGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCT...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGGCTGTATTGTTTGAATaGCTGGAGCCCATCCTCTAC +
Preference number: 5 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRAVLFE*LEPILY
Trigger: GTAGAGGATGGGCTCCAGCAATTCAAACAATACAGC...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGTGTCTGCTGTATTGTTaGAATTGCTGGAGCCCATCC +
Preference number: 5 (lower is better)
Translates to: STETGQEGCCFPVSPHSQCLLYC*NCWSPS
Trigger: GGATGGGCTCCAGCAATTCAAACAATACAGCAGACA...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGCACATGTCTGCTGTATaGTTTGAATTGCTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: STETGQEGCCFPVSPHSQHMSAV*FELLEP
Trigger: GGGCTCCAGCAATTCAAACAATACAGCAGACATGTG...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGCACATGTCTGCTGTATaGTTTGAATTGCTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRHMSAV*FELLEP
Trigger: GGGCTCCAGCAATTCAAACAATACAGCAGACATGTG...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp AGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGGGAAATGTTGCTGATTaGTCTCCAGCTCATCCCAGT +
Preference number: 5 (lower is better)
Translates to: STETGQEGCCFPVSPHSQGNVAD*SPAHPS
Trigger: ACTGGGATGAGCTGGAGACAAATCAGCAACATTTCC...CTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGCACATTTCAGACACATaGGATTATCTCTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRHISDT*DYLWVW
Trigger: CCAGACCCAGAGATAATCCAATGTGTCTGAAATGTG...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGTAGCTCGAGCTCGGTaGGTCTGCAACTGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSVARAR*VCNCPV
Trigger: GACTGGGCAGTTGCAGACCAACCGAGCTCGAGCTAC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS TCA 90 bp GCAAAGTTCCCTTTCACTTGCACAAAAGGGAGGATGCACTCATGCTaGTCTTGTACCATGTATAAACTGAACAGGGACATGCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AKFPFTCTKGRMHSC*SCTMYKLNRDMRLG
Trigger: CCCCAGCCGCATGTCCCTGTTCAGTTTATACATGGTACAAGATCAGCATGAGTGCATCCTCCCTTTTGTGCAAGTGAAAGGGAACTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000536235.5
CDS-3UTR CAA 90 bp ACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCACAGAGGATAGAACTCTCATCATaGCTGGTATCCTCAACAGGA +
Preference number: 5 (lower is better)
Translates to: TETGQEGCCFPVSPHSQRIELSS*LVSSTG
Trigger: TCCTGTTGAGGATACCAGCAATGATGAGAGTTCTAT...CCTCTGTGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp CTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTACATGTGGGGAGAGGGAAATGTTGCTGATTaGTCTCCAGCTCATCCCAGT +
Preference number: 5 (lower is better)
Translates to: LLFCGWREQQEGWYMWGEGNVAD*SPAHPS
Trigger: ACTGGGATGAGCTGGAGACAAATCAGCAACATTTCC...CTCTCCCCACATGTACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGTGTCGCTTCCAGACTaGAGGAGTGGGACAGCACTG +
Preference number: 5 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSVSLPD*RSGTAL
Trigger: CAGTGCTGTCCCACTCCTCAAGTCTGGAAGCGACAC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGTGTCGCTTCCAGACTaGAGGAGTGGGACAGCACTG +
Preference number: 5 (lower is better)
Translates to: PHPPAYTELQEEILSYECVSLPD*RSGTAL
Trigger: CAGTGCTGTCCCACTCCTCAAGTCTGGAAGCGACAC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCATTCAAAACCTCATCCTaGTTCCTGAGGTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSFKTSS*FLRSSL
Trigger: TAAACTGGACCTCAGGAACAAGGATGAGGTTTTGAA...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS GCA 90 bp AAACACCCTTCTCTCTGTAACATGCGGAGTTCTGAGATGCAGGTCTaGAACCTAGCAAAGTTCCCTTTCACTTGCACAAAAGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: KHPSLCNMRSSEMQV*NLAKFPFTCTKGRM
Trigger: CATCCTCCCTTTTGTGCAAGTGAAAGGGAACTTTGCTAGGTTGCAGACCTGCATCTCAGAACTCCGCATGTTACAGAGAGAAGGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GACAGCACTGAAACAGGACAGGAAGGCTGTTGTTTCCCAGTCAGCCCTCACTCAAAGATGGATTTGTTCTaGGTCTGTTCCACTGTTATG +
Preference number: 5 (lower is better)
Translates to: DSTETGQEGCCFPVSPHSKMDLF*VCSTVM
Trigger: CATAACAGTGGAACAGACCAAGAACAAATCCATCTT...TGAGTGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCTGTTTCAGTGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GATGGGCAGAGCAGTCGCTCTTGGAGATCACATTTCAGACACATTGGATTATCTGCAGAGCAGTCGCTCTaGGAGATCACATTTCAGACA +
Preference number: 5 (lower is better)
Translates to: DGQSSRSWRSHFRHIGLSAEQSL*EITFQT
Trigger: TGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTGC...AGATAATCCAATGTGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTGCCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS GCA 90 bp CTGAGAAGTCAGAATAGTAATCTCCAGGGAGGTATAGGTCAGAGCTaGCCTTGTGGTCACATGTCTGCTGTATTGTTTGAATTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LRSQNSNLQGGIGQS*PCGHMSAVLFELLE
Trigger: CTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGCAGCTCTGACCTATACCTCCCTGGAGATTACTATTCTGACTTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000478437.1
ENST00000536235.5
CDS-3UTR CAA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGGCTGTATTGTTTGAATaGCTGGAGCCCATCCTCTAC +
Preference number: 5 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLAVLFE*LEPILY
Trigger: GTAGAGGATGGGCTCCAGCAATTCAAACAATACAGC...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTGTCTGCTGTATTGTTaGAATTGCTGGAGCCCATCC +
Preference number: 5 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLCLLYC*NCWSPS
Trigger: GGATGGGCTCCAGCAATTCAAACAATACAGCAGACA...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTAGGTCAGAGCTGCCCTaGTGGTCACATGTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGRSELP*WSHVCC
Trigger: ACAGCAGACATGTGACCACAAGGGCAGCTCTGACCT...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTTGCAACTGCCCAGTCTaGCAGGGATGCTTTCTCGGA +
Preference number: 5 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGCNCPV*QGCFLG
Trigger: TCCGAGAAAGCATCCCTGCAAGACTGGGCAGTTGCA...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290536.9
CDS-3UTR CAA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTAGGACAGGAAGGCTGTaGTTTCCCAGTCAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGRTGRL*FPSQPS
Trigger: TGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCT...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS GCA 90 bp AAACACCCTTCTCTCTGTAACATGCGGAGTTCTGAGATGCAGGTCTaGAACCTAGCAAAGTTCCCTTTCACTTGCTTAGACATCATCTTC +
Preference number: 5 (lower is better)
Translates to: KHPSLCNMRSSEMQV*NLAKFPFTCLDIIF
Trigger: GAAGATGATGTCTAAGCAAGTGAAAGGGAACTTTGCTAGGTTGCAGACCTGCATCTCAGAACTCCGCATGTTACAGAGAGAAGGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478437.1
CDS-3UTR CAA 90 bp AGTGTGATGAAGTCTCCTTTAGGGTCATCCATTCTCAAGGAGCCGTCAGCTGTGAAGATGGATTTGTTCTaGGTCTGTTCCACTGTTATG +
Preference number: 5 (lower is better)
Translates to: SVMKSPLGSSILKEPSAVKMDLF*VCSTVM
Trigger: CATAACAGTGGAACAGACCAAGAACAAATCCATCTT...CACAGCTGACGGCTCCTTGAGAATGGATGACCCTAAAGGAGACTTCATCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CAA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCGCAGAGCAGTCGCTCTaGGAGATCACATTTCAGACA +
Preference number: 5 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSAEQSL*EITFQT
Trigger: TGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTGC...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCGTAGCTCGAGCTCGGTaGGTCTGCAACTGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLVARAR*VCNCPV
Trigger: GACTGGGCAGTTGCAGACCAACCGAGCTCGAGCTAC...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGATAGAACTCTCATCATaGCTGGTATCCTCAACAGGA +
Preference number: 5 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLIELSS*LVSSTG
Trigger: TCCTGTTGAGGATACCAGCAATGATGAGAGTTCTAT...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCGGAAATGTTGCTGATTaGTCTCCAGCTCATCCCAGT +
Preference number: 5 (lower is better)
Translates to: PHPPAYTELQEEILSYECGNVAD*SPAHPS
Trigger: ACTGGGATGAGCTGGAGACAAATCAGCAACATTTCC...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp TGTAGTGGGAAGGGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTTCAAAACCTCATCCTaGTTCCTGAGGTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: CSGKGTGSEMRLGFQSYLFKTSS*FLRSSL
Trigger: TAAACTGGACCTCAGGAACAAGGATGAGGTTTTGAA...CAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCCCTTCCCACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCAAAGTTCCCTTTCACTaGCACAAAAGGGAGGATGCA +
Preference number: 5 (lower is better)
Translates to: PHPPAYTELQEEILSYECKVPFH*HKREDA
Trigger: TGCATCCTCCCTTTTGTGCAAGTGAAAGGGAACTTT...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCAAAGTTCCCTTTCACTaGCACAAAAGGGAGGATGCA +
Preference number: 5 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSKVPFH*HKREDA
Trigger: TGCATCCTCCCTTTTGTGCAAGTGAAAGGGAACTTT...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp CCTCATCCACCTGCTTACACAGAGCTACAAGAAGAAATTCTGAGTTATGAATGCCACATTTCAGACACATaGGATTATCTCTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: PHPPAYTELQEEILSYECHISDT*DYLWVW
Trigger: CCAGACCCAGAGATAATCCAATGTGTCTGAAATGTG...GCATTCATAACTCAGAATTTCTTCTTGTAGCTCTGTGTAAGCAGGTGGATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCAGGACAGGAAGGCTGTaGTTTCCCAGTCAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLRTGRL*FPSQPS
Trigger: TGAGGGCTGACTGGGAAACAACAGCCTTCCTGTCCT...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp TTTATAAATGGTAGCTATTATTCTGTGGATGGAGGGAGCAACAGGAAGGTTGGTAAAGTTCCCTTTCACTaGCACAAAAGGGAGGATGCA +
Preference number: 5 (lower is better)
Translates to: FINGSYYSVDGGSNRKVGKVPFH*HKREDA
Trigger: TGCATCCTCCCTTTTGTGCAAGTGAAAGGGAACTTT...ACCAACCTTCCTGTTGCTCCCTCCATCCACAGAATAATAGCTACCATTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCATAGAACTCTCATCATaGCTGGTATCCTCAACAGGA +
Preference number: 5 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSIELSS*LVSSTG
Trigger: TCCTGTTGAGGATACCAGCAATGATGAGAGTTCTAT...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTCAAAACCTCATCCTaGTTCCTGAGGTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSFKTSS*FLRSSL
Trigger: TAAACTGGACCTCAGGAACAAGGATGAGGTTTTGAA...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCCCCAGCACACACACTTaGCATGTAGGTACCAAGCAC +
Preference number: 5 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLPSTHT*HVGTKH
Trigger: GTGCTTGGTACCTACATGCAAAGTGTGTGTGCTGGG...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GGCACAGGCTCTGAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCAAGATGGATTTGTTCTaGGTCTGTTCCACTGTTATG +
Preference number: 5 (lower is better)
Translates to: GTGSEMRLGFQSYLSFMSKMDLF*VCSTVM
Trigger: CATAACAGTGGAACAGACCAAGAACAAATCCATCTT...GCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTCAGAGCCTGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS TCA 90 bp GCTTTGAAGAAAATCTCCATGCTGACGATATCATTGTCTATAGTCTaGAGGTCAATGTCAGTTCCCAGAATAGAACTCTCATCATTGCTG +
Preference number: 5 (lower is better)
Translates to: ALKKISMLTISLSIV*RSMSVPRIELSSLL
Trigger: CAGCAATGATGAGAGTTCTATTCTGGGAACTGACATTGACCTTCAGACTATAGACAATGATATCGTCAGCATGGAGATTTTCTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000536235.5
CDS TCA 90 bp GCTTTGAAGAAAATCTCCATGCTGACGATATCATTGTCTATAGTCTaGAGGTCAATGTCAGTTCCCAGAATAGAACTCTCACAAAAGGGA +
Preference number: 5 (lower is better)
Translates to: ALKKISMLTISLSIV*RSMSVPRIELSQKG
Trigger: TCCCTTTTGTGAGAGTTCTATTCTGGGAACTGACATTGACCTTCAGACTATAGACAATGATATCGTCAGCATGGAGATTTTCTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438226.5
CDS-3UTR CAA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCCACATGTCTGCTGTATaGTTTGAATTGCTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLHMSAV*FELLEP
Trigger: GGGCTCCAGCAATTCAAACAATACAGCAGACATGTG...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS-3UTR CAA 90 bp GAAATGAGGCTTGGATTTCAATCTTACTTGTCTTTTATGAGCTTTCAAAACCTCTTATGTAGCCAGGCTTaGAAGAAAATCTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: EMRLGFQSYLSFMSFQNLLCSQA*KKISML
Trigger: CAGCATGGAGATTTTCTTCAAAGCCTGGCTACATAA...GAGGTTTTGAAAGCTCATAAAAGACAAGTAAGATTGAAATCCAAGCCTCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000536235.5
CDS CCA 72 bp CTGCCCAGTCTTTCTCGGAGCTCGGCTCTCCCAGTGTaGGTGGAGCCGCCCCTGAGGCTTGGCATAGATGCT +
Preference number: 6 (lower is better)
Translates to: LPSLSRSSALPV*VEPPLRLGIDA
Trigger: AGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCACACTGGGAGAGCCGAGCTCCGAGAAAGACTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409585.5
ENST00000464686.5
ENST00000536235.5
CDS CCA 72 bp TTCTCTGGCTGTGTCCTGGGCCCGGTGGTTCCCCCTTaGCTAACAGCAGCCATTCCCTTTTCAGCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: FSGCVLGPVVPP*LTAAIPFSAGC
Trigger: ACAGCCTGCTGAAAAGGGAATGGCTGCTGTTAGCCAAGGGGGAACCACCGGGCCCAGGACACAGCCAGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS CAA 72 bp ATTCTCTGGCTGTGTCCTGGGCCCGGTGGTTCCCCCTaGGCTAACAGCAGCCATTCCCTTTTCAGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ILWLCPGPGGSP*ANSSHSLFSRL
Trigger: CAGCCTGCTGAAAAGGGAATGGCTGCTGTTAGCCAAGGGGGAACCACCGGGCCCAGGACACAGCCAGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS GCA 72 bp GTGGGTGGAGCCGCCCCTGAGGCTTGGCATAGATGCTaGTCAGGTGTGAGTACAGGTGGCTTTGAACATGCA +
Preference number: 6 (lower is better)
Translates to: VGGAAPEAWHRC*SGVSTGGFEHA
Trigger: TGCATGTTCAAAGCCACCTGTACTCACACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS TCA 72 bp CGTGGCCACCGCCTTTACCAGCAGTGTGAGGGAGTGTaGCGGCATGATCACATAGAAGGTGCTGGCAGGAAT +
Preference number: 6 (lower is better)
Translates to: RGHRLYQQCEGV*RHDHIEGAGRN
Trigger: ATTCCTGCCAGCACCTTCTATGTGATCATGCCGTCACACTCCCTCACACTGCTGGTAAAGGCGGTGGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS GCA 72 bp AGTGTGGGTGGAGCCGCCCCTGAGGCTTGGCATAGATaGTGCTCAGGTGTGAGTACAGGTGGCTTTGAACAT +
Preference number: 6 (lower is better)
Translates to: SVGGAAPEAWHR*CSGVSTGGFEH
Trigger: ATGTTCAAAGCCACCTGTACTCACACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS CCA 72 bp GGCAGCAAAACCAGAGGGGGAACTGTAGCCACCAGCTaGATATTCTTTACACCGTGCCTGGCGGATCAGCAG +
Preference number: 6 (lower is better)
Translates to: GSKTRGGTVATS*IFFTPCLADQQ
Trigger: CTGCTGATCCGCCAGGCACGGTGTAAAGAATATCCAGCTGGTGGCTACAGTTCCCCCTCTGGTTTTGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290536.9
CDS CCA 72 bp AGTACAGGTGGCTTTGAACATGCAAGGGGTTGTAGGTaGGCTCCAGCTCCAGGCTGTCCAGCATGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: STGGFEHARGCR*APAPGCPACSP
Trigger: TGGAGAGCATGCTGGACAGCCTGGAGCTGGAGCCCACCTACAACCCCTTGCATGTTCAAAGCCACCTGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS TCA 72 bp CCGCCCCTGAGGCTTGGCATAGATGCTGCTCAGGTGTaGGTACAGGTGGCTTTGAACATGCAAGGGGTTGTA +
Preference number: 6 (lower is better)
Translates to: PPLRLGIDAAQV*VQVALNMQGVV
Trigger: TACAACCCCTTGCATGTTCAAAGCCACCTGTACTCACACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS CAA 90 bp GGTCAGAGCTGCCCTTGTGGTCACATGTCTGCTGTATTGTTTGAATaGCTGGAGCCCATCCTCTACTGCCAGCCGCAGAGAAGCACCTTG +
Preference number: 6 (lower is better)
Translates to: GQSCPCGHMSAVLFE*LEPILYCQPQRSTL
Trigger: CAAGGTGCTTCTCTGCGGCTGGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGCAGCTCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS TCA 72 bp GAGCTGCCCTTGTGGTCACATGTCTGCTGTATTGTTTaGATTGCTGGAGCCCATCCTCTACTGCCAGCCGCA +
Preference number: 6 (lower is better)
Translates to: ELPLWSHVCCIV*IAGAHPLLPAA
Trigger: TGCGGCTGGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS CCA 72 bp GGCAGCAAAACCAGAGGGGGAACTGTAGCCACCAGCTaGATATTCTTTACACCTGTCTTCGGAAGACGGAGG +
Preference number: 6 (lower is better)
Translates to: GSKTRGGTVATS*IFFTPVFGRRR
Trigger: CCTCCGTCTTCCGAAGACAGGTGTAAAGAATATCCAGCTGGTGGCTACAGTTCCCCCTCTGGTTTTGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421985.2
ENST00000422394.5
ENST00000438226.5
ENST00000536235.5
CDS CAA 90 bp GGAGGTATAGGTCAGAGCTGCCCTTGTGGTCACATGTCTGCTGTATaGTTTGAATTGCTGGAGCCCATCCTCTACTGCCAGCCGCAGAGA +
Preference number: 6 (lower is better)
Translates to: GGIGQSCPCGHMSAV*FELLEPILYCQPQR
Trigger: TCTCTGCGGCTGGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGCAGCTCTGACCTATACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS TCA 72 bp GGATGCACTCATGCTGATCTTGTACCATGTATAAACTaGACAGGGACATGCGGCTGGGGCCCATCAAGCTGC +
Preference number: 6 (lower is better)
Translates to: GCTHADLVPCIN*TGTCGWGPSSC
Trigger: GCAGCTTGATGGGCCCCAGCCGCATGTCCCTGTTCAGTTTATACATGGTACAAGATCAGCATGAGTGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000438226.5
ENST00000536235.5
CDS TCA 72 bp CCTCTACTGCCAGCCGCAGAGAAGCACCTTGTGATCTaGAACACCCTTCTCTCTGTAACATGCGGAGTTCTG +
Preference number: 6 (lower is better)
Translates to: PLLPAAEKHLVI*NTLLSVTCGVL
Trigger: CAGAACTCCGCATGTTACAGAGAGAAGGGTGTTTCAGATCACAAGGTGCTTCTCTGCGGCTGGCAGTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS GCA 72 bp GCCCTTGTGGTCACATGTCTGCTGTATTGTTTGAATTaGTGGAGCCCATCCTCTACTGCCAGCCGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: ALVVTCLLYCLN*WSPSSTASRRE
Trigger: TTCTCTGCGGCTGGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS CCA 72 bp CTAGAGAGAAGAAGTTCTGCAGAGCCTCACAGAGGTTaGTGCAGATGTCAGCCCAGGACGGTAGAGCAATGT +
Preference number: 6 (lower is better)
Translates to: LERRSSAEPHRG*CRCQPRTVEQC
Trigger: ACATTGCTCTACCGTCCTGGGCTGACATCTGCACCAACCTCTGTGAGGCTCTGCAGAACTTCTTCTCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000438226.5
ENST00000536235.5
CDS CAA 72 bp TGCCCTTGTGGTCACATGTCTGCTGTATTGTTTGAATaGCTGGAGCCCATCCTCTACTGCCAGCCGCAGAGA +
Preference number: 6 (lower is better)
Translates to: CPCGHMSAVLFE*LEPILYCQPQR
Trigger: TCTCTGCGGCTGGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS CAA 72 bp GCAGGCTGTGACACAAAGCATGGAAATGTTGCTGATTaGTCTCCAGCTCATCCCAGTCCAGCTGCCAACAGC +
Preference number: 6 (lower is better)
Translates to: AGCDTKHGNVAD*SPAHPSPAANS
Trigger: GCTGTTGGCAGCTGGACTGGGATGAGCTGGAGACAAATCAGCAACATTTCCATGCTTTGTGTCACAGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS CAA 90 bp CAGCCATTCCCTTTTCAGCAGGCTGTGACACAAAGCATGGAAATGTaGCTGATTTGTCTCCAGCTCATCCCAGTCCAGCTGCCAACAGCT +
Preference number: 6 (lower is better)
Translates to: QPFPFQQAVTQSMEM*LICLQLIPVQLPTA
Trigger: AGCTGTTGGCAGCTGGACTGGGATGAGCTGGAGACAAATCAGCAACATTTCCATGCTTTGTGTCACAGCCTGCTGAAAAGGGAATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000464686.5
ENST00000536235.5
CDS CCA 72 bp CTTGTGGTCACATGTCTGCTGTATTGTTTGAATTGCTaGAGCCCATCCTCTACTGCCAGCCGCAGAGAAGCA +
Preference number: 6 (lower is better)
Translates to: LVVTCLLYCLNC*SPSSTASRREA
Trigger: TGCTTCTCTGCGGCTGGCAGTAGAGGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000478437.1
ENST00000536235.5
CDS TCA 72 bp ACGTGCTCTAGGATTCCCTTTGTGACCTCAACGACCTaGAACCTCCTGACTCTGGCTAGGTCTGTATCTTTC +
Preference number: 6 (lower is better)
Translates to: TCSRIPFVTSTT*NLLTLARSVSF
Trigger: GAAAGATACAGACCTAGCCAGAGTCAGGAGGTTTCAGGTCGTTGAGGTCACAAAGGGAATCCTAGAGCACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000536235.5
CDS GCA 72 bp TCTCTCTGTAACATGCGGAGTTCTGAGATGCAGGTCTaGAACCTAGCAAAGTTCCCTTTCACTTGCTTAGAC +
Preference number: 6 (lower is better)
Translates to: SLCNMRSSEMQV*NLAKFPFTCLD
Trigger: GTCTAAGCAAGTGAAAGGGAACTTTGCTAGGTTGCAGACCTGCATCTCAGAACTCCGCATGTTACAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478437.1
CDS GCA 72 bp TCTCTCTGTAACATGCGGAGTTCTGAGATGCAGGTCTaGAACCTAGCAAAGTTCCCTTTCACTTGCACAAAA +
Preference number: 6 (lower is better)
Translates to: SLCNMRSSEMQV*NLAKFPFTCTK
Trigger: TTTTGTGCAAGTGAAAGGGAACTTTGCTAGGTTGCAGACCTGCATCTCAGAACTCCGCATGTTACAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000536235.5
CDS GCA 72 bp CAGAATAGTAATCTCCAGGGAGGTATAGGTCAGAGCTaGCCTTGTGGTCACATGTCTGCTGTATTGTTTGAA +
Preference number: 6 (lower is better)
Translates to: QNSNLQGGIGQS*PCGHMSAVLFE
Trigger: TTCAAACAATACAGCAGACATGTGACCACAAGGGCAGCTCTGACCTATACCTCCCTGGAGATTACTATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000478437.1
ENST00000536235.5
CDS TCA 72 bp CCTTTCACTTGCACAAAAGGGAGGATGCACTCATGCTaGTCTTGTACCATGTATAAACTGAACAGGGACATG +
Preference number: 6 (lower is better)
Translates to: PFTCTKGRMHSC*SCTMYKLNRDM
Trigger: CATGTCCCTGTTCAGTTTATACATGGTACAAGATCAGCATGAGTGCATCCTCCCTTTTGTGCAAGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290536.9
ENST00000409585.5
ENST00000421985.2
ENST00000422394.5
ENST00000536235.5
CDS TCA 72 bp AATAGAACTCTCACAAAAGGGAGGATGCACTCATGCTaGTCTTGTACCATGTATAAACTGAACAGGGACATG +
Preference number: 6 (lower is better)
Translates to: NRTLTKGRMHSC*SCTMYKLNRDM
Trigger: CATGTCCCTGTTCAGTTTATACATGGTACAAGATCAGCATGAGTGCATCCTCCCTTTTGTGAGAGTTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438226.5