RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LZTS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000088899

Ensembl transcript IDs: ENST00000329152.7, ENST00000337576.6, ENST00000337576.7, ENST00000360342.7, ENST00000645462.1

Found 637 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGGGGCTGGGCAGGTAGCCCTCTCAGCCAAAGGCAGGCCATCTaGTCCCACTTGTCCTGCCAATCTGCCCAGGGAGGGAGAGCACTG +
Preference number: 1 (lower is better)
Translates to: GRGWAGSPLSQRQAI*SHLSCQSAQGGRAL
Trigger: CAGTGCTCTCCCTCCCTGGGCAGATTGGCAGGACAAGTGGGAGCAGATGGCCTGCCTTTGGCTGAGAGGGCTACCTGCCCAGCCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 90 bp CAGGCTCTGAGGCCTGAGTCCAAGAGATCTTGTTGGGGGAGGGGCTaGGCAGGTAGCCCTCTCAGCCAAAGGCAGGCCATCTGCTCCCAC +
Preference number: 1 (lower is better)
Translates to: QALRPESKRSCWGRG*AGSPLSQRQAICSH
Trigger: GTGGGAGCAGATGGCCTGCCTTTGGCTGAGAGGGCTACCTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGACTCAGGCCTCAGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 90 bp TCACAACCAGGCCAGGCTCTGAGGCCTGAGTCCAAGAGATCTTGTTaGGGGAGGGGCTGGGCAGGTAGCCCTCTCAGCCAAAGGCAGGCC +
Preference number: 1 (lower is better)
Translates to: SQPGQALRPESKRSC*GRGWAGSPLSQRQA
Trigger: GGCCTGCCTTTGGCTGAGAGGGCTACCTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGACTCAGGCCTCAGAGCCTGGCCTGGTTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 90 bp CCCAGGCCTCCAGAAGGACTGGGGCACCTTATGGCACTGCACGTCTaGTGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATG +
Preference number: 1 (lower is better)
Translates to: PRPPEGLGHLMALHV*CLHLQQGGAEKGSM
Trigger: CATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 90 bp AGCCGTCAGGCAACGCTTCCCAAGAACAGGAGGACAGATCTTCCCTaGGTGCTGGACTTCCAGCCCCAGTCCTCCCCTCCCGCAACACAC +
Preference number: 1 (lower is better)
Translates to: SRQATLPKNRRTDLP*VLDFQPQSSPPATH
Trigger: GTGTGTTGCGGGAGGGGAGGACTGGGGCTGGAAGTCCAGCACCCAGGGAAGATCTGTCCTCCTGTTCTTGGGAAGCGTTGCCTGACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 90 bp TGTGGCCTAGGCCCAGGTTCTAGGGCAGGTACAGTGAGGGGTGAATaGAATGGGCAGTGGTCGCCAGGATGGCCTCCCACCCAGCTCAGA +
Preference number: 1 (lower is better)
Translates to: CGLGPGSRAGTVRGE*NGQWSPGWPPTQLR
Trigger: TCTGAGCTGGGTGGGAGGCCATCCTGGCGACCACTGCCCATTCCATTCACCCCTCACTGTACCTGCCCTAGAACCTGGGCCTAGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR TCA 90 bp CGCAACACACACACAGGGACACACACTCACAACCAGGCCAGGCTCTaGGGCCTGAGTCCAAGAGATCTTGTTGGGGGAGGGGCTGGGCAG +
Preference number: 1 (lower is better)
Translates to: RNTHTGTHTHNQARL*GLSPRDLVGGGAGQ
Trigger: CTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGACTCAGGCCTCAGAGCCTGGCCTGGTTGTGAGTGTGTGTCCCTGTGTGTGTGTTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 90 bp AGTAGCAGCCCAGGCCTCCAGAAGGACTGGGGCACCTTATGGCACTaGACGTCTGCTGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAG +
Preference number: 1 (lower is better)
Translates to: SSSPGLQKDWGTLWH*TSAASISNKGVPRK
Trigger: CTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCCTGGGCTGCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR TCA 90 bp CAGCAAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTaGGCACAGAGAGCATCACTAGACACAGGGTGGCCAACAGTAGCA +
Preference number: 1 (lower is better)
Translates to: QQTWCRPPQAPWPRR*AQRASLDTGWPTVA
Trigger: TGCTACTGTTGGCCACCCTGTGTCTAGTGATGCTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 90 bp AGGCCTCCAGAAGGACTGGGGCACCTTATGGCACTGCACGTCTGCTaGCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACT +
Preference number: 1 (lower is better)
Translates to: RPPEGLGHLMALHVC*LHLQQGGAEKGSMT
Trigger: AGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTaGAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTGTG +
Preference number: 1 (lower is better)
Translates to: SHPAQRPGEDHPEGL*RGLEATQRGTHVFV
Trigger: CACAAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 90 bp GGCCTCCGGCTCAGACTTGGGCCAGTGGAGCTGGGAAGTGGGCAGTaGACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAG +
Preference number: 1 (lower is better)
Translates to: GLRLRLGPVELGSGQ*TKGQAEFSIGRKGE
Trigger: CTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 90 bp AAACAAGGGCCTCCGGCTCAGACTTGGGCCAGTGGAGCTGGGAAGTaGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAA +
Preference number: 1 (lower is better)
Translates to: KQGPPAQTWASGAGK*AVHQRSSGIFYWKK
Trigger: TTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGGCCCTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTGCTCCCACTTGTCCTaGCAATCTGCCCAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGCSHLS*QSAQGG
Trigger: CCCTCCCTGGGCAGATTGGCAGGACAAGTGGGAGCA...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTCGCAGACACTCGTCTaGCCTCAGAAACTGGGCGAG +
Preference number: 2 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGSQTLV*PQKLGE
Trigger: CTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGA...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTGGGGAGATAGACTCTaGGAGGGCCCCAAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGWGDRL*EGPKRS
Trigger: GCTTCTCTTGGGGCCCTCTCAGAGTCTATCTCCCCA...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGGACTGGGGCACCTTATaGCACTGCACGTCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREDWGTL*HCTSAA
Trigger: GGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTC...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTGTTGGGGGAGGGGCTaGGCAGGTAGCCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: REDIADTRLTSETGRGECCWGRG*AGSPLS
Trigger: GCTGAGAGGGCTACCTGCCCAGCCCCTCCCCCAACA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGATCTTCCCTGGGTGCTaGACTTCCAGCCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGIFPGC*TSSPSP
Trigger: AGGACTGGGGCTGGAAGTCCAGCACCCAGGGAAGAT...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGGTCAGCCAAGCAGATaGGGCTGTTGCCCTGCGGGA +
Preference number: 2 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQGQPSR*GCCPAG
Trigger: TCCCGCAGGGCAACAGCCCCATCTGCTTGGCTGACC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCGCCGGACAGTGGTCCTaGGTGTGGGGTCAGCCAAGC +
Preference number: 2 (lower is better)
Translates to: REDIADTRLTSETGRGECAGQWS*VWGQPS
Trigger: GCTTGGCTGACCCCACACCCAGGACCACTGTCCGGC...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGCCGAGAAAGGGAGCATaGCTCCCCCACCACCTAGGA +
Preference number: 2 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQPRKGA*LPHHLG
Trigger: TCCTAGGTGGTGGGGGAGTCATGCTCCCTTTCTCGG...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGCCAGGCTCTGAGGCCTaGGTCCAAGAGATCTTGTTG +
Preference number: 2 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGPGSEA*VQEILL
Trigger: CAACAAGATCTCTTGGACTCAGGCCTCAGAGCCTGG...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGGGCACCTTATGGCACTaGACGTCTGCTGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREGTLWH*TSAASI
Trigger: GATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCC...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCAGCAGATGGGGCTGTTaGCCTGCGGGATCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: REDIADTRLTSETGRGECSRWGC*PAGSWP
Trigger: TGGCCAGGATCCCGCAGGGCAACAGCCCCATCTGCT...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGGGGGAGGGAGGAACCTaGTCACAGCTGCTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGGEGGT*SQLLRE
Trigger: TTCTCTAAGCAGCTGTGACCAGGTTCCTCCCTCCCC...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACGACTGGGGCACCTTATaGCACTGCACGTCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNDWGTL*HCTSAA
Trigger: GGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTC...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGGCCTCCAGAAGGACTaGGGCACCTTATGGCACTGC +
Preference number: 2 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQGLQKD*GTLWHC
Trigger: GCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAACCAGGCCAGGCTCTaGGGCCTGAGTCCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNNQARL*GLSPRD
Trigger: ATCTCTTGGACTCAGGCCTCAGAGCCTGGCCTGGTT...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACTTTCAGCAAACCTGGTaGAGGCCCCCTCAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNFQQTW*RPPQAP
Trigger: TGGAGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAA...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACCAGATCTTCCCTGGGTaGTGGACTTCCAGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNQIFPG*WTSSPS
Trigger: ACTGGGGCTGGAAGTCCAGCACCCAGGGAAGATCTG...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACAGCAGATGGGGCTGTTaGCCTGCGGGATCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHSRWGC*PAGSWP
Trigger: TGGCCAGGATCCCGCAGGGCAACAGCCCCATCTGCT...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGCTTGCTCACAGTAGTTaGCAGCTCTCTCCACCTTGC +
Preference number: 2 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGLAHSS*QLSPPC
Trigger: GCAAGGTGGAGAGAGCTGGCAACTACTGTGAGCAAG...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGACTGGGGCACCTTATaGCACTGCACGTCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRDWGTL*HCTSAA
Trigger: GGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACCAGTTTCAGCAAACCTaGTGCAGGCCCCCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNQFQQT*CRPPQA
Trigger: AGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAACTG...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTGTTGGGGGAGGGGCTaGGCAGGTAGCCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFCWGRG*AGSPLS
Trigger: GCTGAGAGGGCTACCTGCCCAGCCCCTCCCCCAACA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTGCCGGACAGTGGTCCTaGGTGTGGGGTCAGCCAAGC +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFAGQWS*VWGQPS
Trigger: GCTTGGCTGACCCCACACCCAGGACCACTGTCCGGC...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACCCGAGAAAGGGAGCATaGCTCCCCCACCACCTAGGA +
Preference number: 2 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHPRKGA*LPHHLG
Trigger: TCCTAGGTGGTGGGGGAGTCATGCTCCCTTTCTCGG...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGGACTGCCTAGGAAGATaGTGTGCTGAGCATGAAAGC +
Preference number: 2 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGDCLGR*CAEHES
Trigger: GCTTTCATGCTCAGCACATCATCTTCCTAGGCAGTC...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGGCACCTTATGGCACTaGACGTCTGCTGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRGTLWH*TSAASI
Trigger: GATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCGGCACCTTATGGCACTaGACGTCTGCTGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: REDIADTRLTSETGRGECGTLWH*TSAASI
Trigger: GATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCC...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCTTGTCCTGCCAATCTaGCCAGGGAGGGAGAGCACT +
Preference number: 2 (lower is better)
Translates to: REDIADTRLTSETGRGECLVLPI*PGREST
Trigger: AGTGCTCTCCCTCCCTGGGCAGATTGGCAGGACAAG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCAGATCTTCCCTGGGTaGTGGACTTCCAGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: REDIADTRLTSETGRGECQIFPG*WTSSPS
Trigger: ACTGGGGCTGGAAGTCCAGCACCCAGGGAAGATCTG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGCTGGGAAGTGGGCAGTaGACCAAAGGTCAAGCGGAA +
Preference number: 2 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQLGSGQ*TKGQAE
Trigger: TTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAG...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGGCCTCCAGAAGGACTaGGGCACCTTATGGCACTGC +
Preference number: 2 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRGLQKD*GTLWHC
Trigger: GCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCC...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCGCCGGACAGTGGTCCTaGGTGTGGGGTCAGCCAAGC +
Preference number: 2 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLAGQWS*VWGQPS
Trigger: GCTTGGCTGACCCCACACCCAGGACCACTGTCCGGC...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACGTTAGAGCCGGACAGTaGTCCTGGGTGTGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHVRAGQ*SWVWGQ
Trigger: CTGACCCCACACCCAGGACCACTGTCCGGCTCTAAC...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTCCTCCGGCTCAGACTTaGGCCAGTGGAGCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFPPAQT*ASGAGK
Trigger: CTTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGG...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCCATGGCCTAGGAGGTaGGCACAGAGAGCATCACTA +
Preference number: 2 (lower is better)
Translates to: REDIADTRLTSETGRGECPWPRR*AQRASL
Trigger: TAGTGATGCTCTCTGTGCTCACCTCCTAGGCCATGG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACAACCAGGCCAGGCTCTaGGGCCTGAGTCCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHNQARL*GLSPRD
Trigger: ATCTCTTGGACTCAGGCCTCAGAGCCTGGCCTGGTT...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTCGCAGACACTCGTCTaGCCTCAGAAACTGGGCGAG +
Preference number: 2 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHSQTLV*PQKLGE
Trigger: CTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGATGGCACTGCACGTCTaGTGCCTCCATCTCCAACAA +
Preference number: 2 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQMALHV*CLHLQQ
Trigger: TTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCAT...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACATGGCACTGCACGTCTaGTGCCTCCATCTCCAACAA +
Preference number: 2 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNMALHV*CLHLQQ
Trigger: TTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCAT...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTGCTCCCACTTGTCCTaGCAATCTGCCCAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFCSHLS*QSAQGG
Trigger: CCCTCCCTGGGCAGATTGGCAGGACAAGTGGGAGCA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCAAAGGCAGGCCATCTaGTCCCACTTGTCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: REDIADTRLTSETGRGECQRQAI*SHLSCQ
Trigger: TTGGCAGGACAAGTGGGAGCAGATGGCCTGCCTTTG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTATGGGGCTGTTGCCCTaGGGGATCCTGGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: WGNRVREDIADTRLTSETMGLLP*GILARR
Trigger: CCTTCTGGCCAGGATCCCGCAGGGCAACAGCCCCAT...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGCTTGCTCACAGTAGTTaGCAGCTCTCTCCACCTTGC +
Preference number: 2 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQLAHSS*QLSPPC
Trigger: GCAAGGTGGAGAGAGCTGGCAACTACTGTGAGCAAG...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACGGACACTGGGGACTCTaGCCTTTTGACAGGACATGT +
Preference number: 2 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNGHWGL*PFDRTC
Trigger: ACATGTCCTGTCAAAAGGCCAGAGTCCCCAGTGTCC...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGCTTAGAGAACCTCTTTaGTCTGGGGTTATGGGGTCT +
Preference number: 2 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGLREPL*SGVMGS
Trigger: AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAG...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGGGGAGGGAGGAACCTaGTCACAGCTGCTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRGEGGT*SQLLRE
Trigger: TTCTCTAAGCAGCTGTGACCAGGTTCCTCCCTCCCC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTGACTGGGGCACCTTATaGCACTGCACGTCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFDWGTL*HCTSAA
Trigger: GGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTC...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAATCTTCCCTGGGTGCTaGACTTCCAGCCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRIFPGC*TSSPSP
Trigger: AGGACTGGGGCTGGAAGTCCAGCACCCAGGGAAGAT...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCGGTCAGCCAAGCAGATaGGGCTGTTGCCCTGCGGGA +
Preference number: 2 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLGQPSR*GCCPAG
Trigger: TCCCGCAGGGCAACAGCCCCATCTGCTTGGCTGACC...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTGTTAGAGCCGGACAGTaGTCCTGGGTGTGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFVRAGQ*SWVWGQ
Trigger: CTGACCCCACACCCAGGACCACTGTCCGGCTCTAAC...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTTGGGCCAGTGGAGCTaGGAAGTGGGCAGTGCACCA +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFLGQWS*EVGSAP
Trigger: TGGTGCACTGCCCACTTCCCAGCTCCACTGGCCCAA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTCGCAGACACTCGTCTaGCCTCAGAAACTGGGCGAG +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFSQTLV*PQKLGE
Trigger: CTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTACCCTGGGCAGGTGCTaGGCCACCTCAGGGCGCCAG +
Preference number: 2 (lower is better)
Translates to: ESEKERDIRAEGQASSNFTLGRC*ATSGRQ
Trigger: CTGGCGCCCTGAGGTGGCTCAGCACCTGCCCAGGGT...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGCTTAGAGAACCTCTTTaGTCTGGGGTTATGGGGTCT +
Preference number: 2 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRELREPL*SGVMGS
Trigger: AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAG...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGGGGAGGGAGGAACCTaGTCACAGCTGCTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRGEGGT*SQLLRE
Trigger: TTCTCTAAGCAGCTGTGACCAGGTTCCTCCCTCCCC...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTCACTAGACACAGGGTaGCCAACAGTAGCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHSLDTG*PTVAAQ
Trigger: CTGGGCTGCTACTGTTGGCCACCCTGTGTCTAGTGA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCTTGGGCCAGTGGAGCTaGGAAGTGGGCAGTGCACCA +
Preference number: 2 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLLGQWS*EVGSAP
Trigger: TGGTGCACTGCCCACTTCCCAGCTCCACTGGCCCAA...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATGGCACTGCACGTCTaGTGCCTCCATCTCCAACAA +
Preference number: 2 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHMALHV*CLHLQQ
Trigger: TTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCAT...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAATGGGGCTGTTGCCCTaGGGGATCCTGGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEMGLLP*GILARR
Trigger: CCTTCTGGCCAGGATCCCGCAGGGCAACAGCCCCAT...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCAGTTTCAGCAAACCTaGTGCAGGCCCCCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLQFQQT*CRPPQA
Trigger: AGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAACTG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATGTTGGGGGAGGGGCTaGGCAGGTAGCCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGCWGRG*AGSPLS
Trigger: GCTGAGAGGGCTACCTGCCCAGCCCCTCCCCCAACA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCCAGGCTCTGAGGCCTaGGTCCAAGAGATCTTGTTG +
Preference number: 2 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLPGSEA*VQEILL
Trigger: CAACAAGATCTCTTGGACTCAGGCCTCAGAGCCTGG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACGACTGCCTAGGAAGATaGTGTGCTGAGCATGAAAGC +
Preference number: 2 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHDCLGR*CAEHES
Trigger: GCTTTCATGCTCAGCACATCATCTTCCTAGGCAGTC...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGAACCTGGTCACAGCTaGTTAGAGAACCTCTTTGGT +
Preference number: 2 (lower is better)
Translates to: RRVRVEPRSRQATLPKNREPGHS*LENLFG
Trigger: ACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAAGAACCTCTTTGGTCTaGGGTTATGGGGTCTATGGG +
Preference number: 2 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRRTSLV*GYGVYG
Trigger: CCCATAGACCCCATAACCCCAGACCAAAGAGGTTCT...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGGCCTCCAGAAGGACTaGGGCACCTTATGGCACTGC +
Preference number: 2 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEGLQKD*GTLWHC
Trigger: GCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCC...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTGACTGCCTAGGAAGATaGTGTGCTGAGCATGAAAGC +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFDCLGR*CAEHES
Trigger: GCTTTCATGCTCAGCACATCATCTTCCTAGGCAGTC...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGAACCTGGTCACAGCTaGTTAGAGAACCTCTTTGGT +
Preference number: 2 (lower is better)
Translates to: SAGRHRRHSSDLRNWARREPGHS*LENLFG
Trigger: ACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTC...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGCACTGCACGTCTGCTaGCTCCATCTCCAACAAGGG +
Preference number: 2 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEALHVC*LHLQQG
Trigger: CCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGC...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAATTTCAGCAAACCTGGTaGAGGCCCCCTCAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEFQQTW*RPPQAP
Trigger: TGGAGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAA...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATGCTCCCACTTGTCCTaGCAATCTGCCCAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGCSHLS*QSAQGG
Trigger: CCCTCCCTGGGCAGATTGGCAGGACAAGTGGGAGCA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTATGGGGCTGTTGCCCTaGGGGATCCTGGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: ESEKERDIRAEGQASSNFMGLLP*GILARR
Trigger: CCTTCTGGCCAGGATCCCGCAGGGCAACAGCCCCAT...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTGGACACTGGGGACTCTaGCCTTTTGACAGGACATGT +
Preference number: 2 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSGHWGL*PFDRTC
Trigger: ACATGTCCTGTCAAAAGGCCAGAGTCCCCAGTGTCC...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTAGAACCTCTTTGGTCTaGGGTTATGGGGTCTATGGG +
Preference number: 2 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFRTSLV*GYGVYG
Trigger: CCCATAGACCCCATAACCCCAGACCAAAGAGGTTCT...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAACAGTTTCAGCAAACCTaGTGCAGGCCCCCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEQFQQT*CRPPQA
Trigger: AGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAACTG...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAATCTTCCCTGGGTGCTaGACTTCCAGCCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEIFPGC*TSSPSP
Trigger: AGGACTGGGGCTGGAAGTCCAGCACCCAGGGAAGAT...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAACCATGGCCTAGGAGGTaGGCACAGAGAGCATCACTA +
Preference number: 2 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEPWPRR*AQRASL
Trigger: TAGTGATGCTCTCTGTGCTCACCTCCTAGGCCATGG...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATCGCAGACACTCGTCTaGCCTCAGAAACTGGGCGAG +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGSQTLV*PQKLGE
Trigger: CTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGCACTGCACGTCTGCTaGCTCCATCTCCAACAAGGG +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGALHVC*LHLQQG
Trigger: CCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGGCACCTTATGGCACTaGACGTCTGCTGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: EESEKERDIRAEGQASSNGTLWH*TSAASI
Trigger: GATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACTTGTCCTGCCAATCTaGCCAGGGAGGGAGAGCACT +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGLVLPI*PGREST
Trigger: AGTGCTCTCCCTCCCTGGGCAGATTGGCAGGACAAG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTTTTGGTCTGGGGTTATaGGGTCTATGGGGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: WGNRVREDIADTRLTSETFGLGL*GLWGRE
Trigger: CTCTCTTCCCCATAGACCCCATAACCCCAGACCAAA...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTAGAACCTCTTTGGTCTaGGGTTATGGGGTCTATGGG +
Preference number: 2 (lower is better)
Translates to: WGNRVREDIADTRLTSETRTSLV*GYGVYG
Trigger: CCCATAGACCCCATAACCCCAGACCAAAGAGGTTCT...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGGGTCAGCCAAGCAGATaGGGCTGTTGCCCTGCGGGA +
Preference number: 2 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGGQPSR*GCCPAG
Trigger: TCCCGCAGGGCAACAGCCCCATCTGCTTGGCTGACC...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAATCTGACCTCAGAAACTaGGCGAGGAGAGTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLESDLRN*ARRVPE
Trigger: CTCAGGCACTCTCCTCGCCCAGTTTCTGAGGTCAGA...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCCAGGCTCTGAGGCCTaGGTCCAAGAGATCTTGTTG +
Preference number: 2 (lower is better)
Translates to: EESEKERDIRAEGQASSNPGSEA*VQEILL
Trigger: CAACAAGATCTCTTGGACTCAGGCCTCAGAGCCTGG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTAACCAGGCCAGGCTCTaGGGCCTGAGTCCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: ESEKERDIRAEGQASSNFNQARL*GLSPRD
Trigger: ATCTCTTGGACTCAGGCCTCAGAGCCTGGCCTGGTT...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACAAAGGCAGGCCATCTaGTCCCACTTGTCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGQRQAI*SHLSCQ
Trigger: TTGGCAGGACAAGTGGGAGCAGATGGCCTGCCTTTG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCAGATCTTCCCTGGGTaGTGGACTTCCAGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: ESEKERDIRAEGQASSNFQIFPG*WTSSPS
Trigger: ACTGGGGCTGGAAGTCCAGCACCCAGGGAAGATCTG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTCTTAGAGAACCTCTTTaGTCTGGGGTTATGGGGTCT +
Preference number: 2 (lower is better)
Translates to: WGNRVREDIADTRLTSETLREPL*SGVMGS
Trigger: AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAG...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCTTAGAGAACCTCTTTaGTCTGGGGTTATGGGGTCT +
Preference number: 2 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLLREPL*SGVMGS
Trigger: AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGGGCCTCCAGAAGGACTaGGGCACCTTATGGCACTGC +
Preference number: 2 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGGLQKD*GTLWHC
Trigger: GCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCC...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATCACTAGACACAGGGTaGCCAACAGTAGCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGSLDTG*PTVAAQ
Trigger: CTGGGCTGCTACTGTTGGCCACCCTGTGTCTAGTGA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTCTGACCTCAGAAACTaGGCGAGGAGAGTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: EESEKERDIRAEGQASSNSDLRN*ARRVPE
Trigger: CTCAGGCACTCTCCTCGCCCAGTTTCTGAGGTCAGA...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGAACCAGGCCAGGCTCTaGGGCCTGAGTCCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGNQARL*GLSPRD
Trigger: ATCTCTTGGACTCAGGCCTCAGAGCCTGGCCTGGTT...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTCTCCAACAAGGGGGTaGCGAGAAAGGGAGCATGAC +
Preference number: 2 (lower is better)
Translates to: ESEKERDIRAEGQASSNFSPTRG*REREHD
Trigger: GTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGGCACTGCACGTCTGCTaGCTCCATCTCCAACAAGGG +
Preference number: 2 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGALHVC*LHLQQG
Trigger: CCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGC...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACTTGCTCACAGTAGTTaGCAGCTCTCTCCACCTTGC +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGLAHSS*QLSPPC
Trigger: GCAAGGTGGAGAGAGCTGGCAACTACTGTGAGCAAG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGGACACTGGGGACTCTaGCCTTTTGACAGGACATGT +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGGHWGL*PFDRTC
Trigger: ACATGTCCTGTCAAAAGGCCAGAGTCCCCAGTGTCC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTCTGACCTCAGAAACTaGGCGAGGAGAGTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: ESEKERDIRAEGQASSNFSDLRN*ARRVPE
Trigger: CTCAGGCACTCTCCTCGCCCAGTTTCTGAGGTCAGA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR TCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGCCATGGCCTAGGAGGTaGGCACAGAGAGCATCACTA +
Preference number: 2 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGPWPRR*AQRASL
Trigger: TAGTGATGCTCTCTGTGCTCACCTCCTAGGCCATGG...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATTTGGTCTGGGGTTATaGGGTCTATGGGGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGFGLGL*GLWGRE
Trigger: CTCTCTTCCCCATAGACCCCATAACCCCAGACCAAA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATAGAACCTCTTTGGTCTaGGGTTATGGGGTCTATGGG +
Preference number: 2 (lower is better)
Translates to: EESEKERDIRAEGQASSNRTSLV*GYGVYG
Trigger: CCCATAGACCCCATAACCCCAGACCAAAGAGGTTCT...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGGGGGAGGGAGGAACCTaGTCACAGCTGCTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGGEGGT*SQLLRE
Trigger: TTCTCTAAGCAGCTGTGACCAGGTTCCTCCCTCCCC...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
49% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGTCACTAGACACAGGGTaGCCAACAGTAGCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSLDTG*PTVAAQ
Trigger: CTGGGCTGCTACTGTTGGCCACCCTGTGTCTAGTGA...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGAACCTGGTCACAGCTaGTTAGAGAACCTCTTTGGT +
Preference number: 2 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGEPGHS*LENLFG
Trigger: ACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGAAAGCAGAAAGAGGCTaGGGGAATAGAGTGCGGGAA +
Preference number: 2 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGKAERG*GNRVRE
Trigger: TTCCCGCACTCTATTCCCCCAGCCTCTTTCTGCTTT...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGGAACCTGGTCACAGCTaGTTAGAGAACCTCTTTGGT +
Preference number: 2 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGEPGHS*LENLFG
Trigger: ACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTC...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 72 bp GGTCTGGAGCCCAGGCTCTGTCAGTTTCAGCAAACCTaGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGG +
Preference number: 3 (lower is better)
Translates to: GLEPRLCQFQQT*CRPPQAPWPRR
Trigger: CCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAACTGACAGAGCCTGGGCTCCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 72 bp GGCCCAGGTTCTAGGGCAGGTACAGTGAGGGGTGAATaGAATGGGCAGTGGTCGCCAGGATGGCCTCCCACC +
Preference number: 3 (lower is better)
Translates to: GPGSRAGTVRGE*NGQWSPGWPPT
Trigger: GGTGGGAGGCCATCCTGGCGACCACTGCCCATTCCATTCACCCCTCACTGTACCTGCCCTAGAACCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CAA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGCCTCCGGCTCAGACTaGGGCCAGTGGAGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQASGSD*GQWSWE
Trigger: TTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGGC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CAA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACGTCCAAGAGATCTTGTaGGGGGAGGGGCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNVQEIL*GEGLGR
Trigger: CCTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGAC...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR TCA 72 bp TGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTaGGCACAGAGAGCATCACTAGACACAGGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: WCRPPQAPWPRR*AQRASLDTGWP
Trigger: TGGCCACCCTGTGTCTAGTGATGCTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 72 bp CCAGGCCTCCAGAAGGACTGGGGCACCTTATGGCACTaGACGTCTGCTGCCTCCATCTCCAACAAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: PGLQKDWGTLWH*TSAASISNKGV
Trigger: CACCCCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 72 bp CGCTTCCCAAGAACAGGAGGACAGATCTTCCCTGGGTaGTGGACTTCCAGCCCCAGTCCTCCCCTCCCGCAA +
Preference number: 3 (lower is better)
Translates to: RFPRTGGQIFPG*WTSSPSPPLPQ
Trigger: TTGCGGGAGGGGAGGACTGGGGCTGGAAGTCCAGCACCCAGGGAAGATCTGTCCTCCTGTTCTTGGGAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 72 bp AGGCCTGAGTCCAAGAGATCTTGTTGGGGGAGGGGCTaGGCAGGTAGCCCTCTCAGCCAAAGGCAGGCCATC +
Preference number: 3 (lower is better)
Translates to: RPESKRSCWGRG*AGSPLSQRQAI
Trigger: GATGGCCTGCCTTTGGCTGAGAGGGCTACCTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGACTCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 72 bp GCAACGCTTCCCAAGAACAGGAGGACAGATCTTCCCTaGGTGCTGGACTTCCAGCCCCAGTCCTCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: ATLPKNRRTDLP*VLDFQPQSSPP
Trigger: GGGAGGGGAGGACTGGGGCTGGAAGTCCAGCACCCAGGGAAGATCTGTCCTCCTGTTCTTGGGAAGCGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CAA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCGTCCAAGAGATCTTGTaGGGGGAGGGGCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: REDIADTRLTSETGRGECVQEIL*GEGLGR
Trigger: CCTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGAC...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 72 bp GAAGGACTGGGGCACCTTATGGCACTGCACGTCTGCTaGCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: EGLGHLMALHVC*LHLQQGGAEKG
Trigger: CCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 72 bp GCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTaGAGAGGGTTAGAGGCCACACAGAGGGGCACTCAT +
Preference number: 3 (lower is better)
Translates to: AQRPGEDHPEGL*RGLEATQRGTH
Trigger: ATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 72 bp ACAAGGGCCTCCGGCTCAGACTTGGGCCAGTGGAGCTaGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAAT +
Preference number: 3 (lower is better)
Translates to: TRASGSDLGQWS*EVGSAPKVKRN
Trigger: ATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGGCCCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 72 bp CCCAAAACAAGGGCCTCCGGCTCAGACTTGGGCCAGTaGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAG +
Preference number: 3 (lower is better)
Translates to: PKTRASGSDLGQ*SWEVGSAPKVK
Trigger: CTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGGCCCTTGTTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 72 bp CCAGAAGGACTGGGGCACCTTATGGCACTGCACGTCTaGTGCCTCCATCTCCAACAAGGGGGTGCCGAGAAA +
Preference number: 3 (lower is better)
Translates to: PEGLGHLMALHV*CLHLQQGGAEK
Trigger: TTTCTCGGCACCCCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTCCTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CAA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTGTCCAAGAGATCTTGTaGGGGGAGGGGCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFVQEIL*GEGLGR
Trigger: CCTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGAC...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CAA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTCAGGGGCTAGGGGACTaGCTCACAGTAGTTGCCAGC +
Preference number: 3 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFQGLGD*LTVVAS
Trigger: GCTGGCAACTACTGTGAGCAAGTCCCCTAGCCCCTG...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR CCA 72 bp CAGCTCATTAAACAGTCACCAGTCATGGGAGGAGGCTaGTCAGGGGCTAGGGGACTTGCTCACAGTAGTTGC +
Preference number: 3 (lower is better)
Translates to: QLIKQSPVMGGG*SGARGLAHSSC
Trigger: GCAACTACTGTGAGCAAGTCCCCTAGCCCCTGACCAGCCTCCTCCCATGACTGGTGACTGTTTAATGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CAA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGTCCAAGAGATCTTGTaGGGGGAGGGGCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: EESEKERDIRAEGQASSNVQEIL*GEGLGR
Trigger: CCTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGAC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR GCA 72 bp CTCAGACTTGGGCCAGTGGAGCTGGGAAGTGGGCAGTaGACCAAAGGTCAAGCGGAATTTTCTATTGGAAGA +
Preference number: 3 (lower is better)
Translates to: LRLGPVELGSGQ*TKGQAEFSIGR
Trigger: TCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCACTGGCCCAAGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR TCA 72 bp AAGGTGAGACTTTGGGGAAGAGACTGCCTAGGAAGATaGTGTGCTGAGCATGAAAGCAGAAAGAGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: KVRLWGRDCLGR*CAEHESRKRLG
Trigger: CCCCAGCCTCTTTCTGCTTTCATGCTCAGCACATCATCTTCCTAGGCAGTCTCTTCCCCAAAGTCTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
3UTR-3UTR CAA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCCTCTCAGGTCAGCCTaGTTCTTCAAGGGCAATCAC +
Preference number: 3 (lower is better)
Translates to: EESEKERDIRAEGQASSNPLRSA*FFKGNH
Trigger: GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGGGGTCAGCGCCGGCTTaGGGCAGGCGGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGGSAPA*GRRQAA
Trigger: AGCTGCCTGCCGCCTGCCTCAAGCCGGCGCTGACCC...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGACCGGCCCCGCTTGCTaGCGCAGCCCGAAGCACGCC +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGTGPAC*RSPKHA
Trigger: GGCGTGCTTCGGGCTGCGCCAGCAAGCGGGGCCGGT...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGGCGGCCACCCCGGCCTaGCGGCGCATCTTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREAATPA*RRILAS
Trigger: CGAGGCTAAGATGCGCCGTCAGGCCGGGGTGGCCGC...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGCCCTGCTGGCCCCACTaGCACTGCCTCGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREPCWPH*HCLGGQ
Trigger: CTGGCCCCCGAGGCAGTGGCAGTGGGGCCAGCAGGG...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAGAGGCGGCGAGCGCCTaGGGAAACGGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPEAASA*GNGGLG
Trigger: CCCCAGACCCCCGTTTCCTCAGGCGCTCGCCGCCTC...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR TCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACGCGGCCACCCCGGCCTaGCGGCGCATCTTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNAATPA*RRILAS
Trigger: CGAGGCTAAGATGCGCCGTCAGGCCGGGGTGGCCGC...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCACCCCACTGCCCACGCTaGCCATGGCCAGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPPHCPR*PWPGGG
Trigger: ACCCCCGCCTGGCCATGGGCAGCGTGGGCAGTGGGG...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGGGGGCCAGGGAAACTaGCCTGGCTGCCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQGGQGN*PGCPHP
Trigger: GGGGTGGGGGCAGCCAGGGCAGTTTCCCTGGCCCCC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGCGCTCTGCTCCAGGCTaGGCCGCAGAGCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGRSAPG*AAELPP
Trigger: AGGTGGCAGCTCTGCGGCGCAGCCTGGAGCAGAGCG...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGGGCAGGAAGTCGGCCTaGTCCTTCTGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGGRKSA*SFWQAA
Trigger: GGCCGCCTGCCAGAAGGAGCAGGCCGACTTCCTGCC...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGCGGCCCTCCCGCAGCTaGGAGCGCAGTCCCACGATC +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRERPSRS*ERSPTI
Trigger: GATCGTGGGACTGCGCTCGCAGCTGCGGGAGGGCCG...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGGAGACCCTTGTCCTCTaGGGGGTAGCGGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREETLVL*GVAARP
Trigger: AGGCCGGGCCGCTACCCCTCAGAGGACAAGGGTCTC...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAACTGGGGGAGGGCGGTaGGCAGGCCGCGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPTGGGR*AGRERQ
Trigger: CTGCCTTTCGCGGCCTGCTCACCGCCCTCCCCCAGT...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCGGGGGCCAGGGAAACTaGCCTGGCTGCCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECGGQGN*PGCPHP
Trigger: GGGGTGGGGGCAGCCAGGGCAGTTTCCCTGGCCCCC...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCCCTGCTGGCCCCACTaGCACTGCCTCGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECPCWPH*HCLGGQ
Trigger: CTGGCCCCCGAGGCAGTGGCAGTGGGGCCAGCAGGG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGTCCAGCTCTTCCCGCTaGCGCATCAGCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQSSSSR*RISRAA
Trigger: GGCGGCCCGGCTGATGCGGCAGCGGGAAGAGCTGGA...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGCGCCATGCTGGGGAGTaGGCGTGCTTGCACCCCCTG +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRERHAGE*ACLHPL
Trigger: CAGGGGGTGCAAGCACGCCCACTCCCCAGCATGGCG...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGTGTCCAGTCCGCCTTTaGGGCCACCAGGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQCPVRL*GHQGPA
Trigger: GGCAGGGCCCTGGTGGCCTCAAAGGCGGACTGGACA...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGACGGGGGCCGCGGCTaGAGTAGGTGGCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRDGGRG*SRWQAC
Trigger: GCAGGCCTGCCACCTACTGCAGCCGCGGCCCCCGTC...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCACATGGGCCACCCCACTaGCCACGCTGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPHGPPH*PRCPWP
Trigger: TGGCCATGGGCAGCGTGGGCAGTGGGGTGGCCCATG...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCATGGCCCCACTGCCACTaGCTCGGGGGCCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPWPHCH*LGGQGN
Trigger: GTTTCCCTGGCCCCCGAGGCAGTGGCAGTGGGGCCA...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGCACCACTGCTGCTGCTaGCTCCGCTGCTGCCAACCA +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGHHCCC*LRCCQP
Trigger: TGGTTGGCAGCAGCGGAGGCAGCAGCAGCAGTGGTG...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAAGGCCACCAGGGCCCTaGCGTCCCTCAGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPRPPGP*RPSGVP
Trigger: TGGGACTCCTGAGGGACGGCAGGGCCCTGGTGGCCT...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTCCAGCTCTTCCCGCTaGCGCATCAGCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECSSSSR*RISRAA
Trigger: GGCGGCCCGGCTGATGCGGCAGCGGGAAGAGCTGGA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCGGCCCTCCCGCAGCTaGGAGCGCAGTCCCACGATC +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECRPSRS*ERSPTI
Trigger: GATCGTGGGACTGCGCTCGCAGCTGCGGGAGGGCCG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGCGGCCCTCCCGCAGCTaGGAGCGCAGTCCCACGATC +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRRPSRS*ERSPTI
Trigger: GATCGTGGGACTGCGCTCGCAGCTGCGGGAGGGCCG...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGACCTGTCCCTCCCGGATaGACGGGGGCCGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRPVPPG*TGAAAA
Trigger: TGCAGCCGCGGCCCCCGTCCATCCGGGAGGGACAGG...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGAAGCTCGGAGGGCCGTaGGGCAAAGGCCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREKLGGP*GKGQER
Trigger: CCTCTCCTGGCCTTTGCCCCACGGCCCTCCGAGCTT...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGAGGTGGCCAGGAGCTTaGGTGGGTGGCTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRERWPGA*VGGWAH
Trigger: GTGAGCCCAGCCACCCACCCAAGCTCCTGGCCACCT...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGCGCCATGCTGGGGAGTaGGCGTGCTTGCACCCCCTG +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQRHAGE*ACLHPL
Trigger: CAGGGGGTGCAAGCACGCCCACTCCCCAGCATGGCG...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGCCTTTCCAAGGGGTTaGGGGGCCGACGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQAFPRG*GADGSS
Trigger: TGAGGACCCGTCGGCCCCTCAACCCCTTGGAAAGGC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAGCCTTTCCAAGGGGTTaGGGGGCCGACGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPAFPRG*GADGSS
Trigger: TGAGGACCCGTCGGCCCCTCAACCCCTTGGAAAGGC...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCCTCCAGCTCCTGGATaGGTGCACTGGGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECPPAPG*VHWGRA
Trigger: CGCCCTCCCCCAGTGCACTCATCCAGGAGCTGGAGG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGCCTCCAGCTCCTGGATaGGTGCACTGGGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRPPAPG*VHWGRA
Trigger: CGCCCTCCCCCAGTGCACTCATCCAGGAGCTGGAGG...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCGGCCCCAAGGATCCTaGGCCTGCCGAACCCCGCAA +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECRPQGS*ACRTPQ
Trigger: TTGCGGGGTTCGGCAGGCGCAGGATCCTTGGGGCCG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTGGGGGCCAGGGAAACTaGCCTGGCTGCCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFGGQGN*PGCPHP
Trigger: GGGGTGGGGGCAGCCAGGGCAGTTTCCCTGGCCCCC...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTGCAGCTGTAGGCCCTaGTGGGCGCGCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECCSCRP*WARWAR
Trigger: ACGTGCCCAGCGCGCCCAGCAGGGCCTACAGCTGCA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGCGCAGGCTGAGCAGCTaGTCCTCCTTCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQRRLSS*SSFSRS
Trigger: GCTGCGGGAGAAGGAGGAGCAGCTGCTCAGCCTGCG...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGAGCCTGCGCTCCAGCTaGTGGTTGCGCTGGTACATC +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGSLRSS*WLRWYI
Trigger: GATGTACCAGCGCAACCAGCAGCTGGAGCGCAGGCT...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGAGAGGATCCCGCCCTaGGTCAGCGCGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRERIPP*VSAHRQ
Trigger: CTGCCTGTGCGCGCTGACCCAGGGCGGGATCCTCTC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGCGCTCCTCCAGCTCCTaGATGAGTGCACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRERSSSS*MSALGE
Trigger: CTCCCCCAGTGCACTCATCCAGGAGCTGGAGGAGCG...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGTCGGCCTGCTCCTTCTaGCAGGCGGCCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQSACSF*QAATLS
Trigger: GGACAAGGTGGCCGCCTGCCAGAAGGAGCAGGCCGA...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACGGCCAGAGCATCCTGTaGCTCGGCCGGGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHGQSIL*LGRVHG
Trigger: CCCGTGGACCCGGCCGAGCCACAGGATGCTCTGGCC...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGCGTCGCTCTCGCAGGTaGCCAGAGCATCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRERRSRR*PEHPVA
Trigger: AGCCACAGGATGCTCTGGCCACCTGCGAGAGCGACG...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCGCCATGCTGGGGAGTaGGCGTGCTTGCACCCCCTG +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECRHAGE*ACLHPL
Trigger: CAGGGGGTGCAAGCACGCCCACTCCCCAGCATGGCG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGGACTGGGGCACCTTATaGCACTGCACGTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGDWGTL*HCTSAA
Trigger: GGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTC...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACTGTTGGGGGAGGGGCTaGGCAGGTAGCCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNCWGRG*AGSPLS
Trigger: GCTGAGAGGGCTACCTGCCCAGCCCCTCCCCCAACA...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGCCGGACAGTGGTCCTaGGTGTGGGGTCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQAGQWS*VWGQPS
Trigger: GCTTGGCTGACCCCACACCCAGGACCACTGTCCGGC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGGTCATGGGAGGAGGCTaGTCAGGGGCTAGGGGACTT +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGVMGGG*SGARGL
Trigger: AAGTCCCCTAGCCCCTGACCAGCCTCCTCCCATGAC...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTACCGGCCCCGCTTGCTaGCGCAGCCCGAAGCACGCC +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFTGPAC*RSPKHA
Trigger: GGCGTGCTTCGGGCTGCGCCAGCAAGCGGGGCCGGT...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTGCGGCCACCCCGGCCTaGCGGCGCATCTTAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSAATPA*RRILAS
Trigger: CGAGGCTAAGATGCGCCGTCAGGCCGGGGTGGCCGC...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTACCCTGGGCAGGTGCTaGGCCACCTCAGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFTLGRC*ATSGRQ
Trigger: CTGGCGCCCTGAGGTGGCTCAGCACCTGCCCAGGGT...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGGCCGCTGCAGGGTaGGCGGCCCCAAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETGAAAG*AAPRIL
Trigger: CAGGATCCTTGGGGCCGCGCACCCTGCAGCGGCCCC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAGCCTCTCTCAGGGCCTaGGTTTCCCACAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPASLRA*VSHRWE
Trigger: CTCCCACCTGTGGGAAACGCAGGCCCTGAGAGAGGC...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACCATGGGCCACCCCACTaGCCACGCTGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHHGPPH*PRCPWP
Trigger: TGGCCATGGGCAGCGTGGGCAGTGGGGTGGCCCATG...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACCACCACTGCTGCTGCTaGCTCCGCTGCTGCCAACCA +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNHHCCC*LRCCQP
Trigger: TGGTTGGCAGCAGCGGAGGCAGCAGCAGCAGTGGTG...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGAGCACTGGTCTAGCTTaGCAGAGGTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGSTGLA*QRWPGA
Trigger: AGCTCCTGGCCACCTCTGGCAAGCTAGACCAGTGCT...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGCTGTAGCTTCCCGCTaGAGCCCTGCCGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRAVASR*SPAAAR
Trigger: CCGAGCTGCGGCAGGGCTGCAGCGGGAAGCTACAGC...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGGCAGGAAGTCGGCCTaGTCCTTCTGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRGRKSA*SFWQAA
Trigger: GGCCGCCTGCCAGAAGGAGCAGGCCGACTTCCTGCC...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGGCACTGCACGTCTGCTaGCTCCATCTCCAACAAGGG +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGALHVC*LHLQQG
Trigger: CCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGC...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGGGCACCTTATGGCACTaGACGTCTGCTGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGGTLWH*TSAASI
Trigger: GATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCC...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGCAGATCTTCCCTGGGTaGTGGACTTCCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGQIFPG*WTSSPS
Trigger: ACTGGGGCTGGAAGTCCAGCACCCAGGGAAGATCTG...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGATGGGGCTGTTGCCCTaGGGGATCCTGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQMGLLP*GILARR
Trigger: CCTTCTGGCCAGGATCCCGCAGGGCAACAGCCCCAT...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGCACCCAGAAGGGCTGTaGAGAGGGTTAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGHPEGL*RGLEAT
Trigger: TGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTG...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGGGTCTGGGGGAGGGTaGGTAGGCGACGCACATCTG +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRGSGGG*VGDAHL
Trigger: CAGATGTGCGTCGCCTACCCACCCTCCCCCAGACCC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACGAGAGGATCCCGCCCTaGGTCAGCGCGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHERIPP*VSAHRQ
Trigger: CTGCCTGTGCGCGCTGACCCAGGGCGGGATCCTCTC...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCGCAAACTCCTGGGCATaGGCCACCCCACTGCCCACG +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECANSWA*ATPLPT
Trigger: CGTGGGCAGTGGGGTGGCCCATGCCCAGGAGTTTGC...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGAGGAGCTTGGGTGGGTaGCTGGGCTCACGATACTGC +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRERSLGG*LGSRYC
Trigger: GCAGTATCGTGAGCCCAGCCACCCACCCAAGCTCCT...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAGGCCAGGAGCTTGGGTaGGTGGCTGGGCTCACGATA +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPGQELG*VAGLTI
Trigger: TATCGTGAGCCCAGCCACCCACCCAAGCTCCTGGCC...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGTCCCCAGAGCCCAGGTaGCCTGGCCGCCCCATAGAT +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRSPEPR*PGRPID
Trigger: ATCTATGGGGCGGCCAGGCCACCTGGGCTCTGGGGA...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCGCTCCTCGGCGAAGCTaGCACCCTGGCGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLAPRRS*HPGAPG
Trigger: CCCGGGAGCGCCAGGGTGCCAGCTTCGCCGAGGAGC...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCATGCTTCTTGTCCTGCTaGGCCACAGCCGCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPCFLSC*ATAASL
Trigger: GAGCGAGGCGGCTGTGGCCCAGCAGGACAAGAAGCA...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACCCCGCAGCTCACCATTaGGGTAGAGGGAGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNPAAHH*GRGSWR
Trigger: TCGCCAACTCCCTCTACCTCAATGGTGAGCTGCGGG...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACTGGGTACGACAGGCTTaGAGGCCGACGGCCGAACTA +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNWVRQA*RPTAEL
Trigger: TAGTTCGGCCGTCGGCCTTCAAGCCTGTCGTACCCA...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTACTGGGGGAGGGCGGTaGGCAGGCCGCGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSTGGGR*AGRERQ
Trigger: CTGCCTTTCGCGGCCTGCTCACCGCCCTCCCCCAGT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGAGGAGTCCCGCAGGCTaGGCAGCTGCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRRSPAG*AAAPPS
Trigger: AGAAGGAGGAGCAGCTGCTCAGCCTGCGGGACTCCT...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGCCATGGCCTAGGAGGTaGGCACAGAGAGCATCACTA +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGPWPRR*AQRASL
Trigger: TAGTGATGCTCTCTGTGCTCACCTCCTAGGCCATGG...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGAACCAGGCCAGGCTCTaGGGCCTGAGTCCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRENQARL*GLSPRD
Trigger: ATCTCTTGGACTCAGGCCTCAGAGCCTGGCCTGGTT...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGTCGCAGACACTCGTCTaGCCTCAGAAACTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRESQTLV*PQKLGE
Trigger: CTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGA...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTACCCTGGGCAGGTGCTaGGCCACCTCAGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSTLGRC*ATSGRQ
Trigger: CTGGCGCCCTGAGGTGGCTCAGCACCTGCCCAGGGT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGTGGGGAGATAGACTCTaGGAGGGCCCCAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREWGDRL*EGPKRS
Trigger: GCTTCTCTTGGGGCCCTCTCAGAGTCTATCTCCCCA...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTCTGCAGGGGCCATGTaGCTCACTCTCGCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECSAGAM*LTLAVG
Trigger: CCCGACTGCGAGAGTGAGGCACATGGCCCCTGCAGA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGGCAGGCTTCTCTCCTTaGCTTTCCAAGGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGAGFSP*LSKGLR
Trigger: CCTCAACCCCTTGGAAAGGCAAGGAGAGAAGCCTGC...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTCATGGGCCACCCCACTaGCCACGCTGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFHGPPH*PRCPWP
Trigger: TGGCCATGGGCAGCGTGGGCAGTGGGGTGGCCCATG...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTGGCCCCACTGCCACTaGCTCGGGGGCCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFWPHCH*LGGQGN
Trigger: GTTTCCCTGGCCCCCGAGGCAGTGGCAGTGGGGCCA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGTGCCACCACTGCTGCTaGTGCCTCCGCTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRCHHCC*CLRCCQ
Trigger: TTGGCAGCAGCGGAGGCAGCAGCAGCAGTGGTGGCA...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGTGGGGCTTTGTCACTaGCACCACTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQVGLCH*HHCCCC
Trigger: GCAGCAGCAGCAGTGGTGGCAGTGACAAAGCCCCAC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGACGACGACCCACTCTTaGTGGAGGCCCGTCCACTAT +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRETTTHS*WRPVHY
Trigger: ATAGTGGACGGGCCTCCAGCAAGAGTGGGTCGTCGT...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTCGCTCTGCTCCAGGCTaGGCCGCAGAGCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFRSAPG*AAELPP
Trigger: AGGTGGCAGCTCTGCGGCGCAGCCTGGAGCAGAGCG...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACCGGGCCGCCTCCTCCTaGAGCTGCTTCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHRAASS*SCFLSC
Trigger: GCAGGACAAGAAGCAGCTGCAGGAGGAGGCGGCCCG...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAAGCTCCAGGCTGGCCTaGTTGCTGCTGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPSSRLA*LLLKES
Trigger: GGACTCCTTCAGCAGCAAGCAGGCCAGCCTGGAGCT...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTCGCGCTCCCGCAGCCTaGGCTCCAGCTGCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSRAPAA*APAAGC
Trigger: GCAACCAGCAGCTGGAGCGCAGGCTGCGGGAGCGCG...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGTTTCAGCAAACCTGGTaGAGGCCCCCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREFQQTW*RPPQAP
Trigger: TGGAGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAA...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGCTTGTCCTGCCAATCTaGCCAGGGAGGGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRELVLPI*PGREST
Trigger: AGTGCTCTCCCTCCCTGGGCAGATTGGCAGGACAAG...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCATGCTCCCACTTGTCCTaGCAATCTGCCCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPCSHLS*QSAQGG
Trigger: CCCTCCCTGGGCAGATTGGCAGGACAAGTGGGAGCA...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGATGGGGCTGTTGCCCTaGGGGATCCTGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRMGLLP*GILARR
Trigger: CCTTCTGGCCAGGATCCCGCAGGGCAACAGCCCCAT...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGTTCATGGCAAACTCCTaGGCATGGGCCACCCCACTG +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREFMANS*AWATPL
Trigger: CAGTGGGGTGGCCCATGCCCAGGAGTTTGCCATGAA...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGGCCAGGAGCTTGGGTaGGTGGCTGGGCTCACGATA +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRGQELG*VAGLTI
Trigger: TATCGTGAGCCCAGCCACCCACCCAAGCTCCTGGCC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACAGGTGGCCAGGAGCTTaGGTGGGTGGCTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHRWPGA*VGGWAH
Trigger: GTGAGCCCAGCCACCCACCCAAGCTCCTGGCCACCT...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTCCCCAGAGCCCAGGTaGCCTGGCCGCCCCATAGAT +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHSPEPR*PGRPID
Trigger: ATCTATGGGGCGGCCAGGCCACCTGGGCTCTGGGGA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTAGCTGTAGGCCCTGCTaGGCGCGCTGGGCACGTCGG +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSSCRPC*ARWARR
Trigger: CCGACGTGCCCAGCGCGCCCAGCAGGGCCTACAGCT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTCGGCCTGCTCCTTCTaGCAGGCGGCCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHSACSF*QAATLS
Trigger: GGACAAGGTGGCCGCCTGCCAGAAGGAGCAGGCCGA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTGGCCAGAGCATCCTGTaGCTCGGCCGGGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSGQSIL*LGRVHG
Trigger: CCCGTGGACCCGGCCGAGCCACAGGATGCTCTGGCC...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGCGTCGCTCTCGCAGGTaGCCAGAGCATCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRRRSRR*PEHPVA
Trigger: AGCCACAGGATGCTCTGGCCACCTGCGAGAGCGACG...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACCTGCGCTCCAGCTGCTaGTTGCGCTGGTACATCTCC +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNLRSSC*LRWYIS
Trigger: GGAGATGTACCAGCGCAACCAGCAGCTGGAGCGCAG...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGACTGGGGCACCTTATaGCACTGCACGTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQDWGTL*HCTSAA
Trigger: GGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACGGCCTCCAGAAGGACTaGGGCACCTTATGGCACTGC +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNGLQKD*GTLWHC
Trigger: GCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCC...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTGTTGGGGGAGGGGCTaGGCAGGTAGCCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHCWGRG*AGSPLS
Trigger: GCTGAGAGGGCTACCTGCCCAGCCCCTCCCCCAACA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAGTTAGAGCCGGACAGTaGTCCTGGGTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPVRAGQ*SWVWGQ
Trigger: CTGACCCCACACCCAGGACCACTGTCCGGCTCTAAC...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCCTCCGGCTCAGACTTaGGCCAGTGGAGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECPPAQT*ASGAGK
Trigger: CTTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGAGACCCTTGTCCTCTaGGGGGTAGCGGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETETLVL*GVAARP
Trigger: AGGCCGGGCCGCTACCCCTCAGAGGACAAGGGTCTC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTGGGTACGACAGGCTTaGAGGCCGACGGCCGAACTA +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECWVRQA*RPTAEL
Trigger: TAGTTCGGCCGTCGGCCTTCAAGCCTGTCGTACCCA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCTGTCCAGTCCGCCTTTaGGGCCACCAGGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLCPVRL*GHQGPA
Trigger: GGCAGGGCCCTGGTGGCCTCAAAGGCGGACTGGACA...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTGGCCGCCCCATAGATaGCGACGACCCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECWPPHR*RRPTLA
Trigger: AGCAAGAGTGGGTCGTCGTCATCTATGGGGCGGCCA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGGGTCAGCGCCGGCTTaGGGCAGGCGGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEGSAPA*GRRQAA
Trigger: AGCTGCCTGCCGCCTGCCTCAAGCCGGCGCTGACCC...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCATCGCAGACACTCGTCTaGCCTCAGAAACTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPSQTLV*PQKLGE
Trigger: CTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGA...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGCTAGGGCAGGTACAGTaGGGGGTGAATGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQLGQVQ*GVNGMG
Trigger: GCCCATTCCATTCACCCCTCACTGTACCTGCCCTAG...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGATCTGCAGGGGCCATGTaGCTCACTCTCGCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRSAGAM*LTLAVG
Trigger: CCCGACTGCGAGAGTGAGGCACATGGCCCCTGCAGA...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTCTCCGAGGCCCGGTCTaGAGGGGCCATGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSLRGPV*RGHVPH
Trigger: GTGAGGCACATGGCCCCTGCAGACCGGGCCTCGGAG...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCTCCGAGGCCCGGTCTaGAGGGGCCATGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLLRGPV*RGHVPH
Trigger: GTGAGGCACATGGCCCCTGCAGACCGGGCCTCGGAG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTGCTGCTGCCTCCGCTaGTGCCAACCACGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHCCCLR*CQPRCH
Trigger: GTGGCAACGTGGTTGGCAGCAGCGGAGGCAGCAGCA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGTGGGGCTTTGTCACTaGCACCACTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRVGLCH*HHCCCC
Trigger: GCAGCAGCAGCAGTGGTGGCAGTGACAAAGCCCCAC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGCACTGGTCTAGCTTaGCAGAGGTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNSTGLA*QRWPGA
Trigger: AGCTCCTGGCCACCTCTGGCAAGCTAGACCAGTGCT...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTAGGCCACCAGGGCCCTaGCGTCCCTCAGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSRPPGP*RPSGVP
Trigger: TGGGACTCCTGAGGGACGGCAGGGCCCTGGTGGCCT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCGCTCTGCTCCAGGCTaGGCCGCAGAGCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLRSAPG*AAELPP
Trigger: AGGTGGCAGCTCTGCGGCGCAGCCTGGAGCAGAGCG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGATCTCACTCAACTTCTaGGACACATCCGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGISLNF*DTSACE
Trigger: CTCGCAGGCGGATGTGTCGCAGAAGTTGAGTGAGAT...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGAGCTCCAGGCTGGCCTaGTTGCTGCTGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRSSRLA*LLLKES
Trigger: GGACTCCTTCAGCAGCAAGCAGGCCAGCCTGGAGCT...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCAGCCTGCGCTCCAGCTaGTGGTTGCGCTGGTACATC +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECSLRSS*WLRWYI
Trigger: GATGTACCAGCGCAACCAGCAGCTGGAGCGCAGGCT...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACTTCTTCTCCTCGCCATaGTGGGGAGTGGGCGTGCTT +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNFFSSP*WGVGVL
Trigger: AAGCACGCCCACTCCCCAGCATGGCGAGGAGAAGAA...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAGGCACCTTATGGCACTaGACGTCTGCTGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPGTLWH*TSAASI
Trigger: GATGGAGGCAGCAGACGTGCAGTGCCATAAGGTGCC...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGCAAAGGCAGGCCATCTaGTCCCACTTGTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREQRQAI*SHLSCQ
Trigger: TTGGCAGGACAAGTGGGAGCAGATGGCCTGCCTTTG...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAAGCAGATGGGGCTGTTaGCCTGCGGGATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRSRWGC*PAGSWP
Trigger: TGGCCAGGATCCCGCAGGGCAACAGCCCCATCTGCT...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACAGTTTTCTCCTTCGCTaGCTCAGGGTCCGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHSFLLR*LRVRRG
Trigger: CCCGCGCCGGACCCTGAGGCAGCGAAGGAGAAAACT...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAAGTTTTCTCCTTCGCTaGCTCAGGGTCCGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRSFLLR*LRVRRG
Trigger: CCCGCGCCGGACCCTGAGGCAGCGAAGGAGAAAACT...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTACGGGTCCTCAAGCCTaGGACCCTCCGAGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSTGPQA*DPPRPG
Trigger: ACCGGGCCTCGGAGGGTCCCAGGCTTGAGGACCCGT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGCCCAACCTCATGGGCTaGGGAAATGGGGTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQPNLMG*GNGVGR
Trigger: CCTTCCAACCCCATTTCCCCAGCCCATGAGGTTGGG...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGCCAATGCGGTTAATGTaGCTGGTGGAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREPMRLM*LVEALR
Trigger: CCTCAGTGCCTCCACCAGCCACATTAACCGCATTGG...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGGCCTCCAGAAGGACTaGGGCACCTTATGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRGLQKD*GTLWHC
Trigger: GCAGTGCCATAAGGTGCCCCAGTCCTTCTGGAGGCC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCGTTAGAGCCGGACAGTaGTCCTGGGTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECVRAGQ*SWVWGQ
Trigger: CTGACCCCACACCCAGGACCACTGTCCGGCTCTAAC...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
3UTR CAA 72 bp GCCACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTaGTTCTTCAAGGGCAATCACATCCAACTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ATSGRQEPLRSA*FFKGNHIQLSP
Trigger: GGGGGAGAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.6
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGATACCGTGAAGCCCTCTaGGTCCTTCTGTGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRYREAL*VLLWVR
Trigger: GCGCACCCACAGAAGGACTCAGAGGGCTTCACGGTA...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR TCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGCTGCTCAGCTTACCGTaGAGCCCTCTGAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQLLSLP*SPLSPS
Trigger: AGAAGGACTCAGAGGGCTTCACGGTAAGCTGAGCAG...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR TCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACCCCGCAGCTCACCATTaGGGTAGAGGGAGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHPAAHH*GRGSWR
Trigger: TCGCCAACTCCCTCTACCTCAATGGTGAGCTGCGGG...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTGGCCGCCCCATAGATaGCGACGACCCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHWPPHR*RRPTLA
Trigger: AGCAAGAGTGGGTCGTCGTCATCTATGGGGCGGCCA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGGGTCAGCGCCGGCTTaGGGCAGGCGGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNGSAPA*GRRQAA
Trigger: AGCTGCCTGCCGCCTGCCTCAAGCCGGCGCTGACCC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGACCGAGAAAGGGAGCATaGCTCCCCCACCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRPRKGA*LPHHLG
Trigger: TCCTAGGTGGTGGGGGAGTCATGCTCCCTTTCTCGG...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCACAAGGATCCTGCGCCTaGCGAACCCCGCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPQGSCA*RTPQRI
Trigger: AATTCTTTGCGGGGTTCGGCAGGCGCAGGATCCTTG...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGCATAGCCCCCAGCGTTaGTCAGCTCAGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRHSPQR*SAQLSS
Trigger: TGAGCTGAGCTGAGCTGAGCAACGCTGGGGGCTATG...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACCCCACTGCCCACGCTaGCCATGGCCAGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGPHCPR*PWPGGG
Trigger: ACCCCCGCCTGGCCATGGGCAGCGTGGGCAGTGGGG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCCCCACTGCCCACGCTaGCCATGGCCAGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNPHCPR*PWPGGG
Trigger: ACCCCCGCCTGGCCATGGGCAGCGTGGGCAGTGGGG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACCCTGCTGGCCCCACTaGCACTGCCTCGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGPCWPH*HCLGGQ
Trigger: CTGGCCCCCGAGGCAGTGGCAGTGGGGCCAGCAGGG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCATGCTGCCAACCACGTTaGCACAGACATCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPCCQPR*HRHRCG
Trigger: ACCACACCGATGTCTGTGGCAACGTGGTTGGCAGCA...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGGGGCTTTGTCACTaGCACCACTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRVGLCH*HHCCCC
Trigger: GCAGCAGCAGCAGTGGTGGCAGTGACAAAGCCCCAC...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTCGGGCCGCCTCCTCCTaGAGCTGCTTCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSRAASS*SCFLSC
Trigger: GCAGGACAAGAAGCAGCTGCAGGAGGAGGCGGCCCG...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGATCTCACTCAACTTCTaGGACACATCCGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREISLNF*DTSACE
Trigger: CTCGCAGGCGGATGTGTCGCAGAAGTTGAGTGAGAT...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCGCAGGCTGAGCAGCTaGTCCTCCTTCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLRRLSS*SSFSRS
Trigger: GCTGCGGGAGAAGGAGGAGCAGCTGCTCAGCCTGCG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGCTGGGGAGTGGGCGTaGTTGCACCCCCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGAGEWA*LHPLRP
Trigger: GGGCCGCAGGGGGTGCAAGCACGCCCACTCCCCAGC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGGGACATGTGTCAAAATaGCGAGTGCCCAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREGHVSK*RVPRSI
Trigger: GATCGACCTGGGCACTCGGCATTTTGACACATGTCC...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGATGGCACTGCACGTCTaGTGCCTCCATCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREMALHV*CLHLQQ
Trigger: TTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCAT...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTTTCAGCAAACCTGGTaGAGGCCCCCTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECFQQTW*RPPQAP
Trigger: TGGAGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGCACCCAGAAGGGCTGTaGAGAGGGTTAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRHPEGL*RGLEAT
Trigger: TGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTG...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGCCACCGGCCCCGCTTaGTGGCGCAGCCCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNATGPA*WRSPKH
Trigger: GTGCTTCGGGCTGCGCCAGCAAGCGGGGCCGGTGGC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGCAAACTCCTGGGCATaGGCCACCCCACTGCCCACG +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETANSWA*ATPLPT
Trigger: CGTGGGCAGTGGGGTGGCCCATGCCCAGGAGTTTGC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTGCAAACTCCTGGGCATaGGCCACCCCACTGCCCACG +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSANSWA*ATPLPT
Trigger: CGTGGGCAGTGGGGTGGCCCATGCCCAGGAGTTTGC...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGTACCCACGCTCTTCATaGCAAACTCCTGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQYPRSS*QTPGHG
Trigger: CCCATGCCCAGGAGTTTGCCATGAAGAGCGTGGGTA...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCATACCCACGCTCTTCATaGCAAACTCCTGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPYPRSS*QTPGHG
Trigger: CCCATGCCCAGGAGTTTGCCATGAAGAGCGTGGGTA...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGCTCCTCGGCGAAGCTaGCACCCTGGCGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGAPRRS*HPGAPG
Trigger: CCCGGGAGCGCCAGGGTGCCAGCTTCGCCGAGGAGC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACCTGCGCTCCAGCTGCTaGTTGCGCTGGTACATCTCC +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHLRSSC*LRWYIS
Trigger: GGAGATGTACCAGCGCAACCAGCAGCTGGAGCGCAG...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTCGATCAGATTTCTGTaGACTCAATGCGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGSIRFL*TQCARG
Trigger: GCCTCGAGCGCATTGAGTCCACAGAAATCTGATCGA...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTTGGTCTGGGGTTATaGGGTCTATGGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGFGLGL*GLWGRE
Trigger: CTCTCTTCCCCATAGACCCCATAACCCCAGACCAAA...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACTCACTAGACACAGGGTaGCCAACAGTAGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNSLDTG*PTVAAQ
Trigger: CTGGGCTGCTACTGTTGGCCACCCTGTGTCTAGTGA...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGTCACTAGACACAGGGTaGCCAACAGTAGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQSLDTG*PTVAAQ
Trigger: CTGGGCTGCTACTGTTGGCCACCCTGTGTCTAGTGA...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCATCTTCCCTGGGTGCTaGACTTCCAGCCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECIFPGC*TSSPSP
Trigger: AGGACTGGGGCTGGAAGTCCAGCACCCAGGGAAGAT...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGCCGGACAGTGGTCCTaGGTGTGGGGTCAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETAGQWS*VWGQPS
Trigger: GCTTGGCTGACCCCACACCCAGGACCACTGTCCGGC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTTGGGCCAGTGGAGCTaGGAAGTGGGCAGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHLGQWS*EVGSAP
Trigger: TGGTGCACTGCCCACTTCCCAGCTCCACTGGCCCAA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACACAGTGAGGGGTGAATaGAATGGGCAGTGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNTVRGE*NGQWSP
Trigger: TGGCGACCACTGCCCATTCCATTCACCCCTCACTGT...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTGGCCGCCCCATAGATaGCGACGACCCACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFWPPHR*RRPTLA
Trigger: AGCAAGAGTGGGTCGTCGTCATCTATGGGGCGGCCA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATACTGGGGGAGGGCGGTaGGCAGGCCGCGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNTGGGR*AGRERQ
Trigger: CTGCCTTTCGCGGCCTGCTCACCGCCCTCCCCCAGT...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTAGGAGTCCCGCAGGCTaGGCAGCTGCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSRSPAG*AAAPPS
Trigger: AGAAGGAGGAGCAGCTGCTCAGCCTGCGGGACTCCT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTAGGAGTCCCGCAGGCTaGGCAGCTGCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETRSPAG*AAAPPS
Trigger: AGAAGGAGGAGCAGCTGCTCAGCCTGCGGGACTCCT...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAAACCAGGCCAGGCTCTaGGGCCTGAGTCCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRNQARL*GLSPRD
Trigger: ATCTCTTGGACTCAGGCCTCAGAGCCTGGCCTGGTT...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGATCGCAGACACTCGTCTaGCCTCAGAAACTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRSQTLV*PQKLGE
Trigger: CTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGA...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGGACTGCCTAGGAAGATaGTGTGCTGAGCATGAAAGC +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREDCLGR*CAEHES
Trigger: GCTTTCATGCTCAGCACATCATCTTCCTAGGCAGTC...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTGGGGAGATAGACTCTaGGAGGGCCCCAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHWGDRL*EGPKRS
Trigger: GCTTCTCTTGGGGCCCTCTCAGAGTCTATCTCCCCA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTAGCTCAGAGACCTGGTaGGGACCACCCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFSSETW*GPPRRA
Trigger: AGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCT...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTTGCTGCTGCCTCCGCTaGTGCCAACCACGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSCCCLR*CQPRCH
Trigger: GTGGCAACGTGGTTGGCAGCAGCGGAGGCAGCAGCA...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTTGCCACCACTGCTGCTaGTGCCTCCGCTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSCHHCC*CLRCCQ
Trigger: TTGGCAGCAGCGGAGGCAGCAGCAGCAGTGGTGGCA...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATCCAGCTCTTCCCGCTaGCGCATCAGCCGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGSSSSR*RISRAA
Trigger: GGCGGCCCGGCTGATGCGGCAGCGGGAAGAGCTGGA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACGCTCCAGCTGCTGGTTaGGCTGGTACATCTCCACGT +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHAPAAG*AGTSPR
Trigger: ACGTGGAGATGTACCAGCGCAACCAGCAGCTGGAGC...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCGCGCTCCCGCAGCCTaGGCTCCAGCTGCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNRAPAA*APAAGC
Trigger: GCAACCAGCAGCTGGAGCGCAGGCTGCGGGAGCGCG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTGCTGGGGAGTGGGCGTaGTTGCACCCCCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFAGEWA*LHPLRP
Trigger: GGGCCGCAGGGGGTGCAAGCACGCCCACTCCCCAGC...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TCCCACCCAGCTCAGAGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTGTCAAAATGCCGAGTaGCCAGGTCGATCAGATTTC +
Preference number: 4 (lower is better)
Translates to: SHPAQRPGEDHPEGLCRGCQNAE*PGRSDF
Trigger: GAAATCTGATCGACCTGGGCACTCGGCATTTTGACA...CCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCTGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTCTCCAACAAGGGGGTaGCGAGAAAGGGAGCATGAC +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECSPTRG*REREHD
Trigger: GTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCACAGCTCTCTCCACCTTaGCCCCCAAAACTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPQLSPP*PPKLSL
Trigger: AAGACTGAGTTTTGGGGGGCAAGGTGGAGAGAGCTG...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCACTTGCTCACAGTAGTTaGCAGCTCTCTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPLAHSS*QLSPPC
Trigger: GCAAGGTGGAGAGAGCTGGCAACTACTGTGAGCAAG...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTGCCACCGGCCCCGCTTaGTGGCGCAGCCCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFATGPA*WRSPKH
Trigger: GTGCTTCGGGCTGCGCCAGCAAGCGGGGCCGGTGGC...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCTCTCCCGCTCCCTGTaGACCTTGACCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLLSRSL*TLTLLS
Trigger: GCTGAGCAGGGTCAAGGTCCACAGGGAGCGGGAGAG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCATCTGGGTCGCGGGTaGGCGCCGCCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNHLGRG*APPRAQ
Trigger: CTGTGCCCTTGGCGGCGCCCACCCGCGACCCAGATG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTTCATGGCAAACTCCTaGGCATGGGCCACCCCACTG +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHFMANS*AWATPL
Trigger: CAGTGGGGTGGCCCATGCCCAGGAGTTTGCCATGAA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCGCTTGGGTGGGTGGCTaGGCTCACGATACTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLAWVGG*AHDTAV
Trigger: CACCGCAGTATCGTGAGCCCAGCCACCCACCCAAGC...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGCCAGGAGCTTGGGTaGGTGGCTGGGCTCACGATA +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETGQELG*VAGLTI
Trigger: TATCGTGAGCCCAGCCACCCACCCAAGCTCCTGGCC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAAGTGGTTCTGAGCACTaGTCTAGCTTGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPSGSEH*SSLPEV
Trigger: CACCTCTGGCAAGCTAGACCAGTGCTCAGAACCACT...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGACACCCGCTGGAGTCATaGTCCGAGACTTGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRHPLES*SETCPV
Trigger: GACTGGACAAGTCTCGGACCATGACTCCAGCGGGTG...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTCGCTCCTCCAGCTCCTaGATGAGTGCACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSRSSSS*MSALGE
Trigger: CTCCCCCAGTGCACTCATCCAGGAGCTGGAGGAGCG...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGGACACTGGGGACTCTaGCCTTTTGACAGGACATGT +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQGHWGL*PFDRTC
Trigger: ACATGTCCTGTCAAAAGGCCAGAGTCCCCAGTGTCC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCGGGGAGGGAGGAACCTaGTCACAGCTGCTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECGEGGT*SQLLRE
Trigger: TTCTCTAAGCAGCTGTGACCAGGTTCCTCCCTCCCC...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTGGTCAGCCAAGCAGATaGGGCTGTTGCCCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSGQPSR*GCCPAG
Trigger: TCCCGCAGGGCAACAGCCCCATCTGCTTGGCTGACC...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCCTCCGGCTCAGACTTaGGCCAGTGGAGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLPPAQT*ASGAGK
Trigger: CTTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTCCTCCGGCTCAGACTTaGGCCAGTGGAGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETPPAQT*ASGAGK
Trigger: CTTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGG...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGAGACCCTTGTCCTCTaGGGGGTAGCGGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGETLVL*GVAARP
Trigger: AGGCCGGGCCGCTACCCCTCAGAGGACAAGGGTCTC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTCCCGCAGCTCACCATTaGGGTAGAGGGAGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSPAAHH*GRGSWR
Trigger: TCGCCAACTCCCTCTACCTCAATGGTGAGCTGCGGG...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACCTCCAGCTCCTGGATaGGTGCACTGGGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGPPAPG*VHWGRA
Trigger: CGCCCTCCCCCAGTGCACTCATCCAGGAGCTGGAGG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCCGAGAAAGGGAGCATaGCTCCCCCACCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLPRKGA*LPHHLG
Trigger: TCCTAGGTGGTGGGGGAGTCATGCTCCCTTTCTCGG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACCCAGGCTCTGAGGCCTaGGTCCAAGAGATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHPGSEA*VQEILL
Trigger: CAACAAGATCTCTTGGACTCAGGCCTCAGAGCCTGG...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAGACTGCCTAGGAAGATaGTGTGCTGAGCATGAAAGC +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPDCLGR*CAEHES
Trigger: GCTTTCATGCTCAGCACATCATCTTCCTAGGCAGTC...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCAGCTCAGAGACCTGGTaGGGACCACCCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLSSETW*GPPRRA
Trigger: AGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCT...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACAGGTACAGTGAGGGGTaGATGGAATGGGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHRYSEG*MEWAVV
Trigger: GACCACTGCCCATTCCATTCACCCCTCACTGTACCT...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCTCCGAGGCCCGGTCTaGAGGGGCCATGTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNLRGPV*RGHVPH
Trigger: GTGAGGCACATGGCCCCTGCAGACCGGGCCTCGGAG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGCAGGCTTCTCTCCTTaGCTTTCCAAGGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRAGFSP*LSKGLR
Trigger: CCTCAACCCCTTGGAAAGGCAAGGAGAGAAGCCTGC...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGCACGTCGGGCCACCTaGTGTAGCTTCCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEARRAT*CSFPLQ
Trigger: CTGCAGCGGGAAGCTACAGCAGGTGGCCCGACGTGC...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTGCTTCTTGTCCTGCTaGAGCCGCAACACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFCFLSC*SRNTCS
Trigger: GCTGCAGGTGTTGCGGCTGCAGCAGGACAAGAAGCA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGGCAGGAAGTCGGCCTaGTCCTTCTGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNGRKSA*SFWQAA
Trigger: GGCCGCCTGCCAGAAGGAGCAGGCCGACTTCCTGCC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTTTTCTGTGGACTCAATaGGCTCGAGGCGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETFLWTQ*ARGGRG
Trigger: CCCCCTCCCGCCTCGAGCGCATTGAGTCCACAGAAA...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTCTTGTCCTGCCAATCTaGCCAGGGAGGGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFLVLPI*PGREST
Trigger: AGTGCTCTCCCTCCCTGGGCAGATTGGCAGGACAAG...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCTTGCTCACAGTAGTTaGCAGCTCTCTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECLAHSS*QLSPPC
Trigger: GCAAGGTGGAGAGAGCTGGCAACTACTGTGAGCAAG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTGAGAGAACTTGGGAATaGGGGCTGCCTGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFERTWE*GLPVAH
Trigger: GTGGGCAACAGGCAGCCCCCATTCCCAAGTTCTCTC...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAAAGCTCGGAGGGCCGTaGGGCAAAGGCCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEKLGGP*GKGQER
Trigger: CCTCTCCTGGCCTTTGCCCCACGGCCCTCCGAGCTT...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCCACAGACATCGGTGTaGTCACTGCCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLPQTSV*SLPRSS
Trigger: TGAGCTGCGGGGCAGTGACCACACCGATGTCTGTGG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTCTCACGATACTGCGGTaGGGCTTTGTCACTGCCACC +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFLTILR*GFVTAT
Trigger: GGTGGCAGTGACAAAGCCCCACCGCAGTATCGTGAG...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCAGGAGCTTGGGTGGGTaGCTGGGCTCACGATACTGC +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLRSLGG*LGSRYC
Trigger: GCAGTATCGTGAGCCCAGCCACCCACCCAAGCTCCT...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAAGGTGGCCAGGAGCTTaGGTGGGTGGCTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLERWPGA*VGGWAH
Trigger: GTGAGCCCAGCCACCCACCCAAGCTCCTGGCCACCT...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCACGACCCACTCTTGCTaGAGGCCCGTCCACTATCGG +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLTTHSC*RPVHYR
Trigger: CCGATAGTGGACGGGCCTCCAGCAAGAGTGGGTCGT...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTACGACCCACTCTTGCTaGAGGCCCGTCCACTATCGG +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSTTHSC*RPVHYR
Trigger: CCGATAGTGGACGGGCCTCCAGCAAGAGTGGGTCGT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCTGCGCTCCAGCTGCTaGTTGCGCTGGTACATCTCC +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLLRSSC*LRWYIS
Trigger: GGAGATGTACCAGCGCAACCAGCAGCTGGAGCGCAG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGGACACTGGGGACTCTaGCCTTTTGACAGGACATGT +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRGHWGL*PFDRTC
Trigger: ACATGTCCTGTCAAAAGGCCAGAGTCCCCAGTGTCC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAATGTTGGGGGAGGGGCTaGGCAGGTAGCCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLECWGRG*AGSPLS
Trigger: GCTGAGAGGGCTACCTGCCCAGCCCCTCCCCCAACA...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGTTAGAGCCGGACAGTaGTCCTGGGTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETVRAGQ*SWVWGQ
Trigger: CTGACCCCACACCCAGGACCACTGTCCGGCTCTAAC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTGTCATGGGAGGAGGCTaGTCAGGGGCTAGGGGACTT +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSVMGGG*SGARGL
Trigger: AAGTCCCCTAGCCCCTGACCAGCCTCCTCCCATGAC...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGTCATGGGAGGAGGCTaGTCAGGGGCTAGGGGACTT +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETVMGGG*SGARGL
Trigger: AAGTCCCCTAGCCCCTGACCAGCCTCCTCCCATGAC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACACAGTGAGGGGTGAATaGAATGGGCAGTGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHTVRGE*NGQWSP
Trigger: TGGCGACCACTGCCCATTCCATTCACCCCTCACTGT...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTGTCCAGTCCGCCTTTaGGGCCACCAGGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFCPVRL*GHQGPA
Trigger: GGCAGGGCCCTGGTGGCCTCAAAGGCGGACTGGACA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTCCATGGCCTAGGAGGTaGGCACAGAGAGCATCACTA +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFPWPRR*AQRASL
Trigger: TAGTGATGCTCTCTGTGCTCACCTCCTAGGCCATGG...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTAACCAGGCCAGGCTCTaGGGCCTGAGTCCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETNQARL*GLSPRD
Trigger: ATCTCTTGGACTCAGGCCTCAGAGCCTGGCCTGGTT...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTAGGCCACCAGGGCCCTaGCGTCCCTCAGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFRPPGP*RPSGVP
Trigger: TGGGACTCCTGAGGGACGGCAGGGCCCTGGTGGCCT...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCACGACGACCCACTCTTaGTGGAGGCCCGTCCACTAT +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLTTTHS*WRPVHY
Trigger: ATAGTGGACGGGCCTCCAGCAAGAGTGGGTCGTCGT...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAATCTCACTCAACTTCTaGGACACATCCGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRISLNF*DTSACE
Trigger: CTCGCAGGCGGATGTGTCGCAGAAGTTGAGTGAGAT...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCGCAGGCTGAGCAGCTaGTCCTCCTTCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNRRLSS*SSFSRS
Trigger: GCTGCGGGAGAAGGAGGAGCAGCTGCTCAGCCTGCG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCGCTCCAGCTGCTGGTTaGGCTGGTACATCTCCACGT +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLAPAAG*AGTSPR
Trigger: ACGTGGAGATGTACCAGCGCAACCAGCAGCTGGAGC...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCTTCTTCTCCTCGCCATaGTGGGGAGTGGGCGTGCTT +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLFFSSP*WGVGVL
Trigger: AAGCACGCCCACTCCCCAGCATGGCGAGGAGAAGAA...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTTTCTTCTCCTCGCCATaGTGGGGAGTGGGCGTGCTT +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETFFSSP*WGVGVL
Trigger: AAGCACGCCCACTCCCCAGCATGGCGAGGAGAAGAA...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACGGACATGTGTCAAAATaGCGAGTGCCCAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHGHVSK*RVPRSI
Trigger: GATCGACCTGGGCACTCGGCATTTTGACACATGTCC...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCGCACTGCACGTCTGCTaGCTCCATCTCCAACAAGGG +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLALHVC*LHLQQG
Trigger: CCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGC...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTCTTGTCCTGCCAATCTaGCCAGGGAGGGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETLVLPI*PGREST
Trigger: AGTGCTCTCCCTCCCTGGGCAGATTGGCAGGACAAG...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAAGCAGATGGGGCTGTTaGCCTGCGGGATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLESRWGC*PAGSWP
Trigger: TGGCCAGGATCCCGCAGGGCAACAGCCCCATCTGCT...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTCTGGGAAGTGGGCAGTaGACCAAAGGTCAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFLGSGQ*TKGQAE
Trigger: TTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAG...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACCAGCTCTCTCCACCTTaGCCCCCAAAACTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHQLSPP*PPKLSL
Trigger: AAGACTGAGTTTTGGGGGGCAAGGTGGAGAGAGCTG...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTCAGTCAGGGCAGAAGTaGAAGCTCACTACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFQSGQK*KLTTSA
Trigger: TGCGCTGGTAGTGAGCTTCCACTTCTGCCCTGACTG...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTACCCACGCTCTTCATaGCAAACTCCTGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFYPRSS*QTPGHG
Trigger: CCCATGCCCAGGAGTTTGCCATGAAGAGCGTGGGTA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATCCCCAGAGCCCAGGTaGCCTGGCCGCCCCATAGAT +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGSPEPR*PGRPID
Trigger: ATCTATGGGGCGGCCAGGCCACCTGGGCTCTGGGGA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAATCTCGCCAGCCTTCTaGCACACCTCCCACTTAGTT +
Preference number: 4 (lower is better)
Translates to: SAGRHRRHSSDLRNWARRISPAF*HTSHLV
Trigger: AACTAAGTGGGAGGTGTGCCAGAAGGCTGGCGAGAT...TCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGGGCCAGAGCATCCTGTaGCTCGGCCGGGTCCACGGG +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGGQSIL*LGRVHG
Trigger: CCCGTGGACCCGGCCGAGCCACAGGATGCTCTGGCC...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGTTTGGTCTGGGGTTATaGGGTCTATGGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRFGLGL*GLWGRE
Trigger: CTCTCTTCCCCATAGACCCCATAACCCCAGACCAAA...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCAGAACCTCTTTGGTCTaGGGTTATGGGGTCTATGGG +
Preference number: 4 (lower is better)
Translates to: REDIADTRLTSETGRGECRTSLV*GYGVYG
Trigger: CCCATAGACCCCATAACCCCAGACCAAAGAGGTTCT...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTCTGACCTCAGAAACTaGGCGAGGAGAGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFSDLRN*ARRVPE
Trigger: CTCAGGCACTCTCCTCGCCCAGTTTCTGAGGTCAGA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGGCACTCATGTTTTTGTaGGGGATGCACAGCTCATTA +
Preference number: 4 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREALMFL*GMHSSL
Trigger: TAATGAGCTGTGCATCCCCCACAAAAACATGAGTGC...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTAGGTACAGTGAGGGGTaGATGGAATGGGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETRYSEG*MEWAVV
Trigger: GACCACTGCCCATTCCATTCACCCCTCACTGTACCT...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATCTGCAGGGGCCATGTaGCTCACTCTCGCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGSAGAM*LTLAVG
Trigger: CCCGACTGCGAGAGTGAGGCACATGGCCCCTGCAGA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGCAGGCTTCTCTCCTTaGCTTTCCAAGGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETAGFSP*LSKGLR
Trigger: CCTCAACCCCTTGGAAAGGCAAGGAGAGAAGCCTGC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTAACCCGGCACCGCTCTaGCCCTCAGTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFNPAPL*PSVSPS
Trigger: GGAAGGGGACACTGAGGGGCAGAGCGGTGCCGGGTT...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGTGGCCCCACTGCCACTaGCTCGGGGGCCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGWPHCH*LGGQGN
Trigger: GTTTCCCTGGCCCCCGAGGCAGTGGCAGTGGGGCCA...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCTGCTGCCAACCACGTTaGCACAGACATCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLCCQPR*HRHRCG
Trigger: ACCACACCGATGTCTGTGGCAACGTGGTTGGCAGCA...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCGCTCCCACGCCTTCTaGCGCTCCTCCAGTACCTGG +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFRSHAF*RSSSTW
Trigger: CCAGGTACTGGAGGAGCGGCAGAAGGCGTGGGAGCG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTGCAGCCGCAACACCTaGAGCTGTAGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNCSRNT*SCRPCW
Trigger: CCAGCAGGGCCTACAGCTGCAGGTGTTGCGGCTGCA...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAAGCTCCAGGCTGGCCTaGTTGCTGCTGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLESSRLA*LLLKES
Trigger: GGACTCCTTCAGCAGCAAGCAGGCCAGCCTGGAGCT...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTCAAAGGCAGGCCATCTaGTCCCACTTGTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETQRQAI*SHLSCQ
Trigger: TTGGCAGGACAAGTGGGAGCAGATGGCCTGCCTTTG...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATATGGGGCTGTTGCCCTaGGGGATCCTGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNMGLLP*GILARR
Trigger: CCTTCTGGCCAGGATCCCGCAGGGCAACAGCCCCAT...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTCTGGGAAGTGGGCAGTaGACCAAAGGTCAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETLGSGQ*TKGQAE
Trigger: TTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAG...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTGGGGGCACTAAGTGTTaGAGTCAGGGCAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSGGTKC*SQGRSG
Trigger: TCCACTTCTGCCCTGACTGCAACACTTAGTGCCCCC...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCGGGGGCACTAAGTGTTaGAGTCAGGGCAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLGGTKC*SQGRSG
Trigger: TCCACTTCTGCCCTGACTGCAACACTTAGTGCCCCC...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCAGTCAGGGCAGAAGTaGAAGCTCACTACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLQSGQK*KLTTSA
Trigger: TGCGCTGGTAGTGAGCTTCCACTTCTGCCCTGACTG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAATAAAAGAGAGAACTTaGGAATGGGGGCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPIKERT*EWGLPV
Trigger: AACAGGCAGCCCCCATTCCCAAGTTCTCTCTTTTAT...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGGAGAGGATCCCGCCCTaGGTCAGCGCGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGERIPP*VSAHRQ
Trigger: CTGCCTGTGCGCGCTGACCCAGGGCGGGATCCTCTC...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGCTTGGGTGGGTGGCTaGGCTCACGATACTGCGGTG +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGAWVGG*AHDTAV
Trigger: CACCGCAGTATCGTGAGCCCAGCCACCCACCCAAGC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTCCAATGCGGTTAATGTaGCTGGTGGAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSPMRLM*LVEALR
Trigger: CCTCAGTGCCTCCACCAGCCACATTAACCGCATTGG...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACGCTCCTCCAGCTCCTaGATGAGTGCACTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGRSSSS*MSALGE
Trigger: CTCCCCCAGTGCACTCATCCAGGAGCTGGAGGAGCG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGACTGGGGCACCTTATaGCACTGCACGTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEDWGTL*HCTSAA
Trigger: GGCAGCAGACGTGCAGTGCCATAAGGTGCCCCAGTC...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGGTCAGCCAAGCAGATaGGGCTGTTGCCCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNGQPSR*GCCPAG
Trigger: TCCCGCAGGGCAACAGCCCCATCTGCTTGGCTGACC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTGCTTCTTGTCCTGCTaGGCCACAGCCGCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNCFLSC*ATAASL
Trigger: GAGCGAGGCGGCTGTGGCCCAGCAGGACAAGAAGCA...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGCTCCCTGTGGACCTTaGCCCTGCTCAGCTTACCGT +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNAPCGP*PCSAYR
Trigger: ACGGTAAGCTGAGCAGGGTCAAGGTCCACAGGGAGC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR TCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTTTGGAGGGGCCGACTaGGCCATCCCGGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFFGGAD*AIPDCS
Trigger: ACTGCAGTCCGGGATGGCTCAGTCGGCCCCTCCAAA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGGCCTTTCCAAGGGGTTaGGGGGCCGACGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGAFPRG*GADGSS
Trigger: TGAGGACCCGTCGGCCCCTCAACCCCTTGGAAAGGC...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATGGGTACGACAGGCTTaGAGGCCGACGGCCGAACTA +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGWVRQA*RPTAEL
Trigger: TAGTTCGGCCGTCGGCCTTCAAGCCTGTCGTACCCA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAATGGGGAGATAGACTCTaGGAGGGCCCCAAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEWGDRL*EGPKRS
Trigger: GCTTCTCTTGGGGCCCTCTCAGAGTCTATCTCCCCA...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATAGCTCAGAGACCTGGTaGGGACCACCCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNSSETW*GPPRRA
Trigger: AGCCCTTCTGGGTGGTCCTCACCAGGTCTCTGAGCT...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTGCCACCACTGCTGCTaGTGCCTCCGCTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFCHHCC*CLRCCQ
Trigger: TTGGCAGCAGCGGAGGCAGCAGCAGCAGTGGTGGCA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGCGGGCCGCCTCCTCCTaGAGCTGCTTCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGRAASS*SCFLSC
Trigger: GCAGGACAAGAAGCAGCTGCAGGAGGAGGCGGCCCG...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCTGTGGACTCAATaGGCTCGAGGCGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNFLWTQ*ARGGRG
Trigger: CCCCCTCCCGCCTCGAGCGCATTGAGTCCACAGAAA...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTATGGCACTGCACGTCTaGTGCCTCCATCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETMALHV*CLHLQQ
Trigger: TTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCAT...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTGCTCCCACTTGTCCTaGCAATCTGCCCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNCSHLS*QSAQGG
Trigger: CCCTCCCTGGGCAGATTGGCAGGACAAGTGGGAGCA...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAATTCATGGCAAACTCCTaGGCATGGGCCACCCCACTG +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEFMANS*AWATPL
Trigger: CAGTGGGGTGGCCCATGCCCAGGAGTTTGCCATGAA...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCCACAGACATCGGTGTaGTCACTGCCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNPQTSV*SLPRSS
Trigger: TGAGCTGCGGGGCAGTGACCACACCGATGTCTGTGG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACCACAGACATCGGTGTaGTCACTGCCCCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGPQTSV*SLPRSS
Trigger: TGAGCTGCGGGGCAGTGACCACACCGATGTCTGTGG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTGCTTGGGTGGGTGGCTaGGCTCACGATACTGCGGTG +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFAWVGG*AHDTAV
Trigger: CACCGCAGTATCGTGAGCCCAGCCACCCACCCAAGC...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGGGCACAAATTCTGCATaGAGTGGAAATTCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQGTNSA*SGNSWV
Trigger: TACCCAAGAATTTCCACTCCATGCAGAATTTGTGCC...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGTCGGCCTGCTCCTTCTaGCAGGCGGCCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSACSF*QAATLS
Trigger: GGACAAGGTGGCCGCCTGCCAGAAGGAGCAGGCCGA...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTATCTCGCCAGCCTTCTaGCACACCTCCCACTTAGTT +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSISPAF*HTSHLV
Trigger: AACTAAGTGGGAGGTGTGCCAGAAGGCTGGCGAGAT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCATCTCGCCAGCCTTCTaGCACACCTCCCACTTAGTT +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLISPAF*HTSHLV
Trigger: AACTAAGTGGGAGGTGTGCCAGAAGGCTGGCGAGAT...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTCTCCTCGCCATGCTaGGGAGTGGGCGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNFSSPC*GVGVLA
Trigger: TGCAAGCACGCCCACTCCCCAGCATGGCGAGGAGAA...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTTTTGGTCTGGGGTTATaGGGTCTATGGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFFGLGL*GLWGRE
Trigger: CTCTCTTCCCCATAGACCCCATAACCCCAGACCAAA...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
53% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCCGAGAAAGGGAGCATaGCTCCCCCACCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFPRKGA*LPHHLG
Trigger: TCCTAGGTGGTGGGGGAGTCATGCTCCCTTTCTCGG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAGAGATATAAGGGCTaGGGGCCAAGCCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEERYKG*GPSLLQ
Trigger: TTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTC...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACTAGGGCAGGTACAGTaGGGGGTGAATGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGLGQVQ*GVNGMG
Trigger: GCCCATTCCATTCACCCCTCACTGTACCTGCCCTAG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGAGTAGGTGGCAGGCCTaGCCTCCCCAAGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSRWQA*PPQGLP
Trigger: GGGAAGACCTTGGGGAGGGCAGGCCTGCCACCTACT...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACACCCTCTCAACTCTTTaGTGCAACCCCAGAATTTTG +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHTLSTL*CNPRIL
Trigger: CAAAATTCTGGGGTTGCAGCAAAGAGTTGAGAGGGT...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTTTCTGTGGACTCAATaGGCTCGAGGCGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFFLWTQ*ARGGRG
Trigger: CCCCCTCCCGCCTCGAGCGCATTGAGTCCACAGAAA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGAGGGGCACTCATGTTTTTGAACCTGGTCACAGCTaGTTAGAGAACCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PEGLCRGLEATQRGTHVFEPGHS*LENLFG
Trigger: ACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTC...AAAAACATGAGTGCCCCTCTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAATCTCCAACAAGGGGGTaGCGAGAAAGGGAGCATGAC +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLESPTRG*REREHD
Trigger: GTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGA...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGCACTGCACGTCTGCTaGCTCCATCTCCAACAAGGG +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNALHVC*LHLQQG
Trigger: CCCTTGTTGGAGATGGAGGCAGCAGACGTGCAGTGC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACAGATCTTCCCTGGGTaGTGGACTTCCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGQIFPG*WTSSPS
Trigger: ACTGGGGCTGGAAGTCCAGCACCCAGGGAAGATCTG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAACTGGGAAGTGGGCAGTaGACCAAAGGTCAAGCGGAA +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLELGSGQ*TKGQAE
Trigger: TTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAG...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCACCCAGAAGGGCTGTaGAGAGGGTTAGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNHPEGL*RGLEAT
Trigger: TGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTAGGAGCTTGGGTGGGTaGCTGGGCTCACGATACTGC +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFRSLGG*LGSRYC
Trigger: GCAGTATCGTGAGCCCAGCCACCCACCCAAGCTCCT...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTACGACCCACTCTTGCTaGAGGCCCGTCCACTATCGG +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFTTHSC*RPVHYR
Trigger: CCGATAGTGGACGGGCCTCCAGCAAGAGTGGGTCGT...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTTCTCCTCGCCATGCTaGGGAGTGGGCGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFFSSPC*GVGVLA
Trigger: TGCAAGCACGCCCACTCCCCAGCATGGCGAGGAGAA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCTCGATCAGATTTCTGTaGACTCAATGCGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLSIRFL*TQCARG
Trigger: GCCTCGAGCGCATTGAGTCCACAGAAATCTGATCGA...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATCAGTTTCAGCAAACCTaGTGCAGGCCCCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNQFQQT*CRPPQA
Trigger: AGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAACTG...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTAAAGCAGAAAGAGGCTaGGGGAATAGAGTGCGGGAA +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSKAERG*GNRVRE
Trigger: TTCCCGCACTCTATTCCCCCAGCCTCTTTCTGCTTT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGGGGAGAGCAGTACCTaGATCCAACAGGGAACCAAC +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGGESST*IQQGTN
Trigger: GTTGGTTCCCTGTTGGATTCAGGTACTGCTCTCCCC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR TCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAACCCAGGCATCCAAGGTaGAGGAATAAGGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEPRHPR*RNKAGI
Trigger: TATCCCAGCCTTATTCCTTCACCTTGGATGCCTGGG...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR TCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGAGAGATATAAGGGCTaGGGGCCAAGCCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNERYKG*GPSLLQ
Trigger: TTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATAGGTACAGTGAGGGGTaGATGGAATGGGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNRYSEG*MEWAVV
Trigger: GACCACTGCCCATTCCATTCACCCCTCACTGTACCT...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCTAGGGCAGGTACAGTaGGGGGTGAATGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFLGQVQ*GVNGMG
Trigger: GCCCATTCCATTCACCCCTCACTGTACCTGCCCTAG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGACCATTCCTAAACTTCTaGCTTAGCCCCACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGPFLNF*LSPTSA
Trigger: GGCGGAGGTGGGGCTAAGGCAGAAGTTTAGGAATGG...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGGCCTCCTCCTGCAGCTaGTTCTTGTCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGASSCS*FLSCCS
Trigger: GCTGCAGCAGGACAAGAAGCAGCTGCAGGAGGAGGC...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTGCTCCAGCTGCTGGTTaGGCTGGTACATCTCCACGT +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFAPAAG*AGTSPR
Trigger: ACGTGGAGATGTACCAGCGCAACCAGCAGCTGGAGC...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGAGCCTGCGCTCCAGCTaGTGGTTGCGCTGGTACATC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSLRSS*WLRWYI
Trigger: GATGTACCAGCGCAACCAGCAGCTGGAGCGCAGGCT...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTTGTCAAAATGCCGAGTaGCCAGGTCGATCAGATTTC +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSCQNAE*PGRSDF
Trigger: GAAATCTGATCGACCTGGGCACTCGGCATTTTGACA...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGAACCTGGTCACAGCTaGTTAGAGAACCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETEPGHS*LENLFG
Trigger: ACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAACTTGCTCACAGTAGTTaGCAGCTCTCTCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLELAHSS*QLSPPC
Trigger: GCAAGGTGGAGAGAGCTGGCAACTACTGTGAGCAAG...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCTCCCCTTCCCTACAATaGGTACAAAAAGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLSPSLQ*VQKVPR
Trigger: CCTGGGAACTTTTTGTACCCATTGTAGGGAAGGGGA...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCTCACGATACTGCGGTaGGGCTTTGTCACTGCCACC +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFLTILR*GFVTAT
Trigger: GGTGGCAGTGACAAAGCCCCACCGCAGTATCGTGAG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACGGCACAAATTCTGCATaGAGTGGAAATTCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHGTNSA*SGNSWV
Trigger: TACCCAAGAATTTCCACTCCATGCAGAATTTGTGCC...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCACCCGCTGGAGTCATaGTCCGAGACTTGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFHPLES*SETCPV
Trigger: GACTGGACAAGTCTCGGACCATGACTCCAGCGGGTG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGGGGAGGGAGGAACCTaGTCACAGCTGCTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNGEGGT*SQLLRE
Trigger: TTCTCTAAGCAGCTGTGACCAGGTTCCTCCCTCCCC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTCACTAGACACAGGGTaGCCAACAGTAGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNSLDTG*PTVAAQ
Trigger: CTGGGCTGCTACTGTTGGCCACCCTGTGTCTAGTGA...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCAGTTTCAGCAAACCTaGTGCAGGCCCCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFQFQQT*CRPPQA
Trigger: AGCCTGAGGGGGCCTGCACCAGGTTTGCTGAAACTG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATCTGACCTCAGAAACTaGGCGAGGAGAGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGSDLRN*ARRVPE
Trigger: CTCAGGCACTCTCCTCGCCCAGTTTCTGAGGTCAGA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGTTGGGCCAGTGGAGCTaGGAAGTGGGCAGTGCACCA +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGLGQWS*EVGSAP
Trigger: TGGTGCACTGCCCACTTCCCAGCTCCACTGGCCCAA...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCCATGGCCTAGGAGGTaGGCACAGAGAGCATCACTA +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFPWPRR*AQRASL
Trigger: TAGTGATGCTCTCTGTGCTCACCTCCTAGGCCATGG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCCAGGCTCTGAGGCCTaGGTCCAAGAGATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFPGSEA*VQEILL
Trigger: CAACAAGATCTCTTGGACTCAGGCCTCAGAGCCTGG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR TCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTGAGAGATATAAGGGCTaGGGGCCAAGCCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFERYKG*GPSLLQ
Trigger: TTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTC...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTGCTGCCAACCACGTTaGCACAGACATCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFCCQPR*HRHRCG
Trigger: ACCACACCGATGTCTGTGGCAACGTGGTTGGCAGCA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGAGCACTGGTCTAGCTTaGCAGAGGTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSTGLA*QRWPGA
Trigger: AGCTCCTGGCCACCTCTGGCAAGCTAGACCAGTGCT...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGAGCTGCTTCTTGTCCTaGTGCAGCCGCAACACCTGC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSCFLS*CSRNTC
Trigger: GCAGGTGTTGCGGCTGCAGCAGGACAAGAAGCAGCT...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAATGGCACTGCACGTCTaGTGCCTCCATCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGMALHV*CLHLQQ
Trigger: TTGTTGGAGATGGAGGCAGCAGACGTGCAGTGCCAT...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGCAGATCTTCCCTGGGTaGTGGACTTCCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGQIFPG*WTSSPS
Trigger: ACTGGGGCTGGAAGTCCAGCACCCAGGGAAGATCTG...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAAATATCCCAACCTCATaGGCTGGGGAAATGGGGTTG +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLENIPTS*AGEMGL
Trigger: CAACCCCATTTCCCCAGCCCATGAGGTTGGGATATT...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCGCAACCCCAGAATTTTaGGGTTCTTTATCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLATPEF*GSLSWV
Trigger: GACCCAAGATAAAGAACCCCAAAATTCTGGGGTTGC...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAAGTGGTTCTGAGCACTaGTCTAGCTTGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGSGSEH*SSLPEV
Trigger: CACCTCTGGCAAGCTAGACCAGTGCTCAGAACCACT...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTGCACTCATGTTTTTGTaGGGGATGCACAGCTCATTA +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSALMFL*GMHSSL
Trigger: TAATGAGCTGTGCATCCCCCACAAAAACATGAGTGC...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTGGACATGTGTCAAAATaGCGAGTGCCCAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFGHVSK*RVPRSI
Trigger: GATCGACCTGGGCACTCGGCATTTTGACACATGTCC...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGTCTCCAACAAGGGGGTaGCGAGAAAGGGAGCATGAC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSPTRG*REREHD
Trigger: GTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGA...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGCAGTCAGGGCAGAAGTaGAAGCTCACTACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGQSGQK*KLTTSA
Trigger: TGCGCTGGTAGTGAGCTTCCACTTCTGCCCTGACTG...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTAGTGGTTCTGAGCACTaGTCTAGCTTGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ESEKERDIRAEGQASSNFSGSEH*SSLPEV
Trigger: CACCTCTGGCAAGCTAGACCAGTGCTCAGAACCACT...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAACTTAGAGAACCTCTTTaGTCTGGGGTTATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLELREPL*SGVMGS
Trigger: AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAG...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGTCTGACCTCAGAAACTaGGCGAGGAGAGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSDLRN*ARRVPE
Trigger: CTCAGGCACTCTCCTCGCCCAGTTTCTGAGGTCAGA...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGACAGTGAGGGGTGAATaGAATGGGCAGTGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGTVRGE*NGQWSP
Trigger: TGGCGACCACTGCCCATTCCATTCACCCCTCACTGT...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATGTCAAAATGCCGAGTaGCCAGGTCGATCAGATTTC +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGCQNAE*PGRSDF
Trigger: GAAATCTGATCGACCTGGGCACTCGGCATTTTGACA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR GCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGAACCTGGTCACAGCTaGTTAGAGAACCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNEPGHS*LENLFG
Trigger: ACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTAAATTCTGCATGGAGTaGAAATTCTTGGGTACGACA +
Preference number: 4 (lower is better)
Translates to: WGNRVREDIADTRLTSETKFCME*KFLGTT
Trigger: TGTCGTACCCAAGAATTTCCACTCCATGCAGAATTT...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GGAACCTGGTCACAGCTGCTTAGAGAACCTCTTTGGTCTGGGGTTATGGGGTCTAAATTCTGCATGGAGTaGAAATTCTTGGGTACGACA +
Preference number: 4 (lower is better)
Translates to: GTWSQLLREPLWSGVMGSKFCME*KFLGTT
Trigger: TGTCGTACCCAAGAATTTCCACTCCATGCAGAATTT...AGACCCCATAACCCCAGACCAAAGAGGTTCTCTAAGCAGCTGTGACCAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATGGGGTTCTTTATCTTaGGTCTGGGACCCTAATATC +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGWGSLS*VWDPNI
Trigger: GATATTAGGGTCCCAGACCCAAGATAAAGAACCCCA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGTCGATCAGATTTCTGTaGACTCAATGCGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSIRFL*TQCARG
Trigger: GCCTCGAGCGCATTGAGTCCACAGAAATCTGATCGA...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGCACTCATGTTTTTGTaGGGGATGCACAGCTCATTA +
Preference number: 4 (lower is better)
Translates to: EESEKERDIRAEGQASSNALMFL*GMHSSL
Trigger: TAATGAGCTGTGCATCCCCCACAAAAACATGAGTGC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGGCACAAATTCTGCATaGAGTGGAAATTCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGGTNSA*SGNSWV
Trigger: TACCCAAGAATTTCCACTCCATGCAGAATTTGTGCC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CCA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGTCTTTATCTTGGGTCTaGGACCCTAATATCCCAACC +
Preference number: 4 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGSLSWV*DPNIPT
Trigger: GGTTGGGATATTAGGGTCCCAGACCCAAGATAAAGA...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CCA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAAAATTCTGCATGGAGTaGAAATTCTTGGGTACGACA +
Preference number: 4 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGKFCME*KFLGTT
Trigger: TGTCGTACCCAAGAATTTCCACTCCATGCAGAATTT...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS CCA 90 bp GCCCATGGCCAGGCGGGGGTCCGGGGGTCCAAGCTCGGAGGGCCGTaGGGCAAAGGCCAGGAGAGGATCCCGCCCTGGGTCAGCGCGCAC +
Preference number: 5 (lower is better)
Translates to: AHGQAGVRGSKLGGP*GKGQERIPPWVSAH
Trigger: GTGCGCGCTGACCCAGGGCGGGATCCTCTCCTGGCCTTTGCCCCACGGCCCTCCGAGCTTGGACCCCCGGACCCCCGCCTGGCCATGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 90 bp GAGCATCCTGTGGCTCGGCCGGGTCCACGGGGGTCAGCGCCGGCTTaGGGCAGGCGGCAGGCAGCTCGCCTTCGCCCAGCTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: EHPVARPGPRGSAPA*GRRQAARLRPAPGW
Trigger: CCAGCCTGGAGCTGGGCGAAGGCGAGCTGCCTGCCGCCTGCCTCAAGCCGGCGCTGACCCCCGTGGACCCGGCCGAGCCACAGGATGCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 90 bp CGCTGGGCACGTCGGGCCACCTGCTGTAGCTTCCCGCTGCAGCCCTaGCGCAGCTCGGCCAGCTCCCGCTCCCACGCCTTCTGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RWARRATCCSFPLQP*RSSASSRSHAFCRS
Trigger: GGAGCGGCAGAAGGCGTGGGAGCGGGAGCTGGCCGAGCTGCGGCAGGGCTGCAGCGGGAAGCTACAGCAGGTGGCCCGACGTGCCCAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329152.7
ENST00000337576.7
CDS GCA 90 bp GCTGGGCGCGCTGGGCACGTCGGGCCACCTGCTGTAGCTTCCCGCTaGAGCCCTGCCGCAGCTCGGCCAGCTCCCGCTCCCACGCCTTCT +
Preference number: 5 (lower is better)
Translates to: AGRAGHVGPPAVASR*SPAAARPAPAPTPS
Trigger: AGAAGGCGTGGGAGCGGGAGCTGGCCGAGCTGCGGCAGGGCTGCAGCGGGAAGCTACAGCAGGTGGCCCGACGTGCCCAGCGCGCCCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329152.7
ENST00000337576.7
CDS CCA 90 bp GGGTCTGGGGGAGGGTGGGTAGGCGACGCACATCTGGGTCGCGGGTaGGCGCCGCCAAGGGCACAGCCTGTCCCTCCCGGATGGACGGGG +
Preference number: 5 (lower is better)
Translates to: GSGGGWVGDAHLGRG*APPRAQPVPPGWTG
Trigger: CCCCGTCCATCCGGGAGGGACAGGCTGTGCCCTTGGCGGCGCCCACCCGCGACCCAGATGTGCGTCGCCTACCCACCCTCCCCCAGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 90 bp TGCAGCTGTAGGCCCTGCTGGGCGCGCTGGGCACGTCGGGCCACCTaGTGTAGCTTCCCGCTGCAGCCCTGCCGCAGCTCGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CSCRPCWARWARRAT*CSFPLQPCRSSASS
Trigger: GGAGCTGGCCGAGCTGCGGCAGGGCTGCAGCGGGAAGCTACAGCAGGTGGCCCGACGTGCCCAGCGCGCCCAGCAGGGCCTACAGCTGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329152.7
ENST00000337576.7
CDS CCA 90 bp ACAGCCTGTCCCTCCCGGATGGACGGGGGCCGCGGCTGCAGTAGGTaGCAGGCCTGCCCTCCCCAAGGTCTTCCCAGCTCGGCCGCACCG +
Preference number: 5 (lower is better)
Translates to: TACPSRMDGGRGCSR*QACPPQGLPSSAAP
Trigger: CGGTGCGGCCGAGCTGGGAAGACCTTGGGGAGGGCAGGCCTGCCACCTACTGCAGCCGCGGCCCCCGTCCATCCGGGAGGGACAGGCTGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 90 bp GCCAAGGGCACAGCCTGTCCCTCCCGGATGGACGGGGGCCGCGGCTaGAGTAGGTGGCAGGCCTGCCCTCCCCAAGGTCTTCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: AKGTACPSRMDGGRG*SRWQACPPQGLPSS
Trigger: CGAGCTGGGAAGACCTTGGGGAGGGCAGGCCTGCCACCTACTGCAGCCGCGGCCCCCGTCCATCCGGGAGGGACAGGCTGTGCCCTTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS TCA 90 bp CAGCCGCTCCTCCAGCTCCTGGATGAGTGCACTGGGGGAGGGCGGTaGGCAGGCCGCGAAAGGCAGGCCTCCACCTCCGCCCTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: QPLLQLLDECTGGGR*AGRERQASTSALPR
Trigger: TCTGGGGAGGGCGGAGGTGGAGGCCTGCCTTTCGCGGCCTGCTCACCGCCCTCCCCCAGTGCACTCATCCAGGAGCTGGAGGAGCGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 90 bp TCCTCAAGCCTGGGACCCTCCGAGGCCCGGTCTGCAGGGGCCATGTaGCTCACTCTCGCAGTCGGGGCTCGGCCCGAACCAGCTGCGCGA +
Preference number: 5 (lower is better)
Translates to: SSSLGPSEARSAGAM*LTLAVGARPEPAAR
Trigger: TCGCGCAGCTGGTTCGGGCCGAGCCCCGACTGCGAGAGTGAGGCACATGGCCCCTGCAGACCGGGCCTCGGAGGGTCCCAGGCTTGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CCA 90 bp GCGCATCTTAGCCTCGTCGCTCTCGCAGGTGGCCAGAGCATCCTGTaGCTCGGCCGGGTCCACGGGGGTCAGCGCCGGCTTGAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: AHLSLVALAGGQSIL*LGRVHGGQRRLEAG
Trigger: GCCTGCCTCAAGCCGGCGCTGACCCCCGTGGACCCGGCCGAGCCACAGGATGCTCTGGCCACCTGCGAGAGCGACGAGGCTAAGATGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 90 bp TCCCCGTCCACGGAAACCAAGGAGGCGGCAGCGGCCACCCCGGCCTaGCGGCGCATCTTAGCCTCGTCGCTCTCGCAGGTGGCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SPSTETKEAAAATPA*RRILASSLSQVARA
Trigger: TGCTCTGGCCACCTGCGAGAGCGACGAGGCTAAGATGCGCCGTCAGGCCGGGGTGGCCGCTGCCGCCTCCTTGGTTTCCGTGGACGGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 90 bp ACCTCCGCCCTCCCCAGAGCCCAGGTGGCCTGGCCGCCCCATAGATaGCGACGACCCACTCTTGCTGGAGGCCCGTCCACTATCGGAGGT +
Preference number: 5 (lower is better)
Translates to: TSALPRAQVAWPPHR*RRPTLAGGPSTIGG
Trigger: ACCTCCGATAGTGGACGGGCCTCCAGCAAGAGTGGGTCGTCGTCATCTATGGGGCGGCCAGGCCACCTGGGCTCTGGGGAGGGCGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 90 bp GGCCATGTGCCTCACTCTCGCAGTCGGGGCTCGGCCCGAACCAGCTaGGCGACTTTGGAGGGGCCGACTGAGCCATCCCGGACTGCAGTT +
Preference number: 5 (lower is better)
Translates to: GHVPHSRSRGSARTS*ATLEGPTEPSRTAV
Trigger: AACTGCAGTCCGGGATGGCTCAGTCGGCCCCTCCAAAGTCGCGCAGCTGGTTCGGGCCGAGCCCCGACTGCGAGAGTGAGGCACATGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 90 bp ACCCTCTCCCGCTCCCTGTGGACCTTGACCCTGCTCAGCTTACCGTaGAGCCCTCTGAGTCCTTCTGTGGGTGCGCGTCCCCCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: TLSRSLWTLTLLSLP*SPLSPSVGARPPPP
Trigger: TGGGGGAGGGGGACGCGCACCCACAGAAGGACTCAGAGGGCTTCACGGTAAGCTGAGCAGGGTCAAGGTCCACAGGGAGCGGGAGAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS TCA 90 bp CAGCTCACCATTGAGGTAGAGGGAGTTGGCGAGACCCTTGTCCTCTaGGGGGTAGCGGCCCGGCCTCTCCCTGCTGGCCCCACTGCCACT +
Preference number: 5 (lower is better)
Translates to: QLTIEVEGVGETLVL*GVAARPLPAGPTAT
Trigger: AGTGGCAGTGGGGCCAGCAGGGAGAGGCCGGGCCGCTACCCCTCAGAGGACAAGGGTCTCGCCAACTCCCTCTACCTCAATGGTGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 90 bp CACACCTCCCACTTAGTTTCCTCTATCCGGGGCAGGAAGTCGGCCTaGTCCTTCTGGCAGGCGGCCACCTTGTCCTCCAGCTCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: HTSHLVSSIRGRKSA*SFWQAATLSSSSSR
Trigger: GCGGGAAGAGCTGGAGGACAAGGTGGCCGCCTGCCAGAAGGAGCAGGCCGACTTCCTGCCCCGGATAGAGGAAACTAAGTGGGAGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CCA 90 bp CACTTAGTTTCCTCTATCCGGGGCAGGAAGTCGGCCTGCTCCTTCTaGCAGGCGGCCACCTTGTCCTCCAGCTCTTCCCGCTGCCGCATC +
Preference number: 5 (lower is better)
Translates to: HLVSSIRGRKSACSF*QAATLSSSSSRCRI
Trigger: GATGCGGCAGCGGGAAGAGCTGGAGGACAAGGTGGCCGCCTGCCAGAAGGAGCAGGCCGACTTCCTGCCCCGGATAGAGGAAACTAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAACCAGCTGCGCGACTTaGGAGGGGCCGACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPTSCAT*EGPTEP
Trigger: TGGCTCAGTCGGCCCCTCCAAAGTCGCGCAGCTGGT...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGGACGACGACCCACTCTaGCTGGAGGCCCGTCCACTA +
Preference number: 5 (lower is better)
Translates to: KPGAGPLRLHGLGGEHREDDDPL*LEARPL
Trigger: TAGTGGACGGGCCTCCAGCAAGAGTGGGTCGTCGTC...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTGGCAGGCGGCCACCTaGTCCTCCAGCTCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: REDIADTRLTSETGRGECWQAAT*SSSSSR
Trigger: GCGGGAAGAGCTGGAGGACAAGGTGGCCGCCTGCCA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp AGACCTGGTGAGGACCACCCAGAAGGGCTGTGCAGAGGGTTAGAGGCCACACAGTCCAGGCTGGCCTGCTaGCTGCTGAAGGAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: RPGEDHPEGLCRGLEATQSRLAC*LLKESR
Trigger: GCGGGACTCCTTCAGCAGCAAGCAGGCCAGCCTGGA...CTGTGTGGCCTCTAACCCTCTGCACAGCCCTTCTGGGTGGTCCTCACCAGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCCGCCACCGGCCCCGCTaGCTGGCGCAGCCCGAAGCA +
Preference number: 5 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLRHRPR*LAQPEA
Trigger: TGCTTCGGGCTGCGCCAGCAAGCGGGGCCGGTGGCG...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCACCAGCTGCGCGACTTaGGAGGGGCCGACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: REDIADTRLTSETGRGECTSCAT*EGPTEP
Trigger: TGGCTCAGTCGGCCCCTCCAAAGTCGCGCAGCTGGT...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCAGTCCAAGAGATCTTGTaGGGGGAGGGGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPVQEIL*GEGLGR
Trigger: CCTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGAC...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 90 bp CGTTGCCACAGACATCGGTGTGGTCACTGCCCCGCAGCTCACCATTaGGGTAGAGGGAGTTGGCGAGACCCTTGTCCTCTGAGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: RCHRHRCGHCPAAHH*GRGSWRDPCPLRGS
Trigger: GCTACCCCTCAGAGGACAAGGGTCTCGCCAACTCCCTCTACCTCAATGGTGAGCTGCGGGGCAGTGACCACACCGATGTCTGTGGCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTGCCTTTCCAAGGGGTaGAGGGGCCGACGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHCLSKG*RGRRVL
Trigger: GAGGACCCGTCGGCCCCTCAACCCCTTGGAAAGGCA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACCTGCTGCCAACCACGTaGCCACAGACATCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNLLPTT*PQTSVW
Trigger: CCACACCGATGTCTGTGGCAACGTGGTTGGCAGCAG...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp GCCAGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACTACTGCGGTGGGGCTTaGTCACTGCCACCACTGCTG +
Preference number: 5 (lower is better)
Translates to: ARRVRVEPRSRQATLPKNYCGGA*SLPPLL
Trigger: CAGCAGTGGTGGCAGTGACAAAGCCCCACCGCAGTA...GTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCATTGGGTACGACAGGCTaGAAGGCCGACGGCCGAACT +
Preference number: 5 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPLGTTG*KADGRT
Trigger: AGTTCGGCCGTCGGCCTTCAAGCCTGTCGTACCCAA...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACTCCAGGCTGGCCTGCTaGCTGCTGAAGGAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHSRLAC*LLKESR
Trigger: GCGGGACTCCTTCAGCAGCAAGCAGGCCAGCCTGGA...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACGCCTCCGGCTCAGACTaGGGCCAGTGGAGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHASGSD*GQWSWE
Trigger: TTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGGC...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp TGCCTCCATCTCCAACAAGGGGGTGCCGAGAAAGGGAGCATGACTCCCCCACCACAGGGGCTAGGGGACTaGCTCACAGTAGTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: CLHLQQGGAEKGSMTPPPQGLGD*LTVVAS
Trigger: GCTGGCAACTACTGTGAGCAAGTCCCCTAGCCCCTG...TGGTGGGGGAGTCATGCTCCCTTTCTCGGCACCCCCTTGTTGGAGATGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGCTGCTGCCAACCACGTaGCCACAGACATCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRLLPTT*PQTSVW
Trigger: CCACACCGATGTCTGTGGCAACGTGGTTGGCAGCAG...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCTACTGCGGTGGGGCTTaGTCACTGCCACCACTGCTG +
Preference number: 5 (lower is better)
Translates to: REDIADTRLTSETGRGECYCGGA*SLPPLL
Trigger: CAGCAGTGGTGGCAGTGACAAAGCCCCACCGCAGTA...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGTTGGGTACGACAGGCTaGAAGGCCGACGGCCGAACT +
Preference number: 5 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRLGTTG*KADGRT
Trigger: AGTTCGGCCGTCGGCCTTCAAGCCTGTCGTACCCAA...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCCAGGGGCTAGGGGACTaGCTCACAGTAGTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: REDIADTRLTSETGRGECQGLGD*LTVVAS
Trigger: GCTGGCAACTACTGTGAGCAAGTCCCCTAGCCCCTG...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 90 bp GCTCAGCTCAGCTCAGCTCAGCTCAGCGTTCCATTCCTAAACTTCTaGCTTAGCCCCACCTCCGCCATGAGCTTCCCAGGCTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: AQLSSAQLSVPFLNF*LSPTSAMSFPGSVT
Trigger: GGTCACTGAGCCTGGGAAGCTCATGGCGGAGGTGGGGCTAAGGCAGAAGTTTAGGAATGGAACGCTGAGCTGAGCTGAGCTGAGCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CAA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGCGCAGGCTTCTCTCCTaGCCTTTCCAAGGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRRRLLS*PFQGVE
Trigger: CTCAACCCCTTGGAAAGGCAAGGAGAGAAGCCTGCG...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACCTGCTGCCAACCACGTaGCCACAGACATCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHLLPTT*PQTSVW
Trigger: CCACACCGATGTCTGTGGCAACGTGGTTGGCAGCAG...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGGGCGAGGAGAGTGCGTCATGGTCCGAGACTaGTCCAGTCCGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: REDIADTRLTSETGRGECVMVRD*SSPPLR
Trigger: CCTCAAAGGCGGACTGGACAAGTCTCGGACCATGAC...GCACTCTCCTCGCCCAGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGCCTCCGGCTCAGACTaGGGCCAGTGGAGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: WGNRVREDIADTRLTSETASGSD*GQWSWE
Trigger: TTCCCAGCTCCACTGGCCCAAGTCTGAGCCGGAGGC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCGCCACCGGCCCCGCTaGCTGGCGCAGCCCGAAGCA +
Preference number: 5 (lower is better)
Translates to: ESEKERDIRAEGQASSNFRHRPR*LAQPEA
Trigger: TGCTTCGGGCTGCGCCAGCAAGCGGGGCCGGTGGCG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS CCA 90 bp GGACATGTGTCAAAATGCCGAGTGCCCAGGTCGATCAGATTTCTGTaGACTCAATGCGCTCGAGGCGGGAGGGGGTCCAGGCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GHVSKCRVPRSIRFL*TQCARGGRGSRPSS
Trigger: AGAAGAAGGCCTGGACCCCCTCCCGCCTCGAGCGCATTGAGTCCACAGAAATCTGATCGACCTGGGCACTCGGCATTTTGACACATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACCGCAGGCTTCTCTCCTaGCCTTTCCAAGGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHRRLLS*PFQGVE
Trigger: CTCAACCCCTTGGAAAGGCAAGGAGAGAAGCCTGCG...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACGTCATGGTCCGAGACTaGTCCAGTCCGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHVMVRD*SSPPLR
Trigger: CCTCAAAGGCGGACTGGACAAGTCTCGGACCATGAC...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCGACGACGACCCACTCTaGCTGGAGGCCCGTCCACTA +
Preference number: 5 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLDDDPL*LEARPL
Trigger: TAGTGGACGGGCCTCCAGCAAGAGTGGGTCGTCGTC...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAACCAGCTGCGCGACTTaGGAGGGGCCGACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLETSCAT*EGPTEP
Trigger: TGGCTCAGTCGGCCCCTCCAAAGTCGCGCAGCTGGT...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGATGGCAGGCGGCCACCTaGTCCTCCAGCTCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGWQAAT*SSSSSR
Trigger: GCGGGAAGAGCTGGAGGACAAGGTGGCCGCCTGCCA...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGCCTCTCAGGTCAGCCTaGTTCTTCAAGGGCAATCAC +
Preference number: 5 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRPLRSA*FFKGNH
Trigger: GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGG...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS CCA 90 bp CTTGGGTCTGGGACCCTAATATCCCAACCTCATGGGCTGGGGAAATaGGGTTGGAAGGGGAGAGCAGTACCTGAATCCAACAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: LGSGTLISQPHGLGK*GWKGRAVPESNREP
Trigger: TGGTTCCCTGTTGGATTCAGGTACTGCTCTCCCCTTCCAACCCCATTTCCCCAGCCCATGAGGTTGGGATATTAGGGTCCCAGACCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CAA 90 bp AAACCTGGTGCAGGCCCCCTCAGGCTCCATGGCCTAGGAGGTGAGCACAGAGAGTGCAACCCCAGAATTTaGGGGTTCTTTATCTTGGGT +
Preference number: 5 (lower is better)
Translates to: KPGAGPLRLHGLGGEHRECNPRI*GFFILG
Trigger: ACCCAAGATAAAGAACCCCAAAATTCTGGGGTTGCA...CTCTCTGTGCTCACCTCCTAGGCCATGGAGCCTGAGGGGGCCTGCACCAGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CAA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTGGCAGGCGGCCACCTaGTCCTCCAGCTCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: ESEKERDIRAEGQASSNFWQAAT*SSSSSR
Trigger: GCGGGAAGAGCTGGAGGACAAGGTGGCCGCCTGCCA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTCCAGGCTGGCCTGCTaGCTGCTGAAGGAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: EESEKERDIRAEGQASSNSRLAC*LLKESR
Trigger: GCGGGACTCCTTCAGCAGCAAGCAGGCCAGCCTGGA...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTGCCTTTCCAAGGGGTaGAGGGGCCGACGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: ESEKERDIRAEGQASSNFCLSKG*RGRRVL
Trigger: GAGGACCCGTCGGCCCCTCAACCCCTTGGAAAGGCA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp AGAAGGGTGAGGGTAGAGCCGAGAAGCCGTCAGGCAACGCTTCCCAAGAACAGGGACCCTCTCAACTCTTaGCTGCAACCCCAGAATTTT +
Preference number: 5 (lower is better)
Translates to: RRVRVEPRSRQATLPKNRDPLNS*LQPQNF
Trigger: AAAATTCTGGGGTTGCAGCAAAGAGTTGAGAGGGTC...CCTGTTCTTGGGAAGCGTTGCCTGACGGCTTCTCGGCTCTACCCTCACCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CAA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGACGACGACCCACTCTaGCTGGAGGCCCGTCCACTA +
Preference number: 5 (lower is better)
Translates to: EESEKERDIRAEGQASSNDDDPL*LEARPL
Trigger: TAGTGGACGGGCCTCCAGCAAGAGTGGGTCGTCGTC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CATGTTTTTGTGGGGGATGCACAGCTCATTAAACAGTCACCAGTCATGGGAGGAGTCCAAGAGATCTTGTaGGGGGAGGGGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: HVFVGDAQLIKQSPVMGGVQEIL*GEGLGR
Trigger: CCTGCCCAGCCCCTCCCCCAACAAGATCTCTTGGAC...TCCTCCCATGACTGGTGACTGTTTAATGAGCTGTGCATCCCCCACAAAAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp TGGAGCTGGGAAGTGGGCAGTGCACCAAAGGTCAAGCGGAATTTTCTATTGGAACAGGGGCTAGGGGACTaGCTCACAGTAGTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: WSWEVGSAPKVKRNFLLEQGLGD*LTVVAS
Trigger: GCTGGCAACTACTGTGAGCAAGTCCCCTAGCCCCTG...TTCCAATAGAAAATTCCGCTTGACCTTTGGTGCACTGCCCACTTCCCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTCCTGCAGCTGCTTCTaGTCCTGCTGGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: EESEKERDIRAEGQASSNSCSCF*SCWATA
Trigger: GGCTGTGGCCCAGCAGGACAAGAAGCAGCTGCAGGA...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS TCA 90 bp GGCACAAATTCTGCATGGAGTGGAAATTCTTGGGTACGACAGGCTTaGAGGCCGACGGCCGAACTAGTGGTTCTGAGCACTGGTCTAGCT +
Preference number: 5 (lower is better)
Translates to: GTNSAWSGNSWVRQA*RPTAELVVLSTGLA
Trigger: AGCTAGACCAGTGCTCAGAACCACTAGTTCGGCCGTCGGCCTTCAAGCCTGTCGTACCCAAGAATTTCCACTCCATGCAGAATTTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp ACCTCAGGGCGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATGGAGTGGAAATTCTaGGGTACGACAGGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: TSGRQEPLRSALFFKGNHMEWKF*GTTGLK
Trigger: CTTCAAGCCTGTCGTACCCAAGAATTTCCACTCCAT...GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCGCCCTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTCCTGCAGCTGCTTCTaGTCCTGCTGGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: ESEKERDIRAEGQASSNFSCSCF*SCWATA
Trigger: GGCTGTGGCCCAGCAGGACAAGAAGCAGCTGCAGGA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp TGGGGGAATAGAGTGCGGGAAGACATCGCAGACACTCGTCTGACCTCAGAAACTGATAAAAGAGAGAACTaGGGAATGGGGGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: WGNRVREDIADTRLTSETDKREN*GMGAAC
Trigger: ACAGGCAGCCCCCATTCCCAAGTTCTCTCTTTTATC...AGTTTCTGAGGTCAGACGAGTGTCTGCGATGTCTTCCCGCACTCTATTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS-3UTR CAA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTTACTGCGGTGGGGCTTaGTCACTGCCACCACTGCTG +
Preference number: 5 (lower is better)
Translates to: ESEKERDIRAEGQASSNFYCGGA*SLPPLL
Trigger: CAGCAGTGGTGGCAGTGACAAAGCCCCACCGCAGTA...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp GAAGAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATGTCATGGTCCGAGACTaGTCCAGTCCGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: EESEKERDIRAEGQASSNVMVRD*SSPPLR
Trigger: CCTCAAAGGCGGACTGGACAAGTCTCGGACCATGAC...ATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp CGCCAGGAACCTCTCAGGTCAGCCTTGTTCTTCAAGGGCAATCACATCCAACTCATGGAGTGGAAATTCTaGGGTACGACAGGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: RQEPLRSALFFKGNHIQLMEWKF*GTTGLK
Trigger: CTTCAAGCCTGTCGTACCCAAGAATTTCCACTCCAT...GAGTTGGATGTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGGTTCCTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp TGCACCAAAGGTCAAGCGGAATTTTCTATTGGAAGAAAAGGTGAGACTTTGGGGCGCAGGCTTCTCTCCTaGCCTTTCCAAGGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: CTKGQAEFSIGRKGETLGRRLLS*PFQGVE
Trigger: CTCAACCCCTTGGAAAGGCAAGGAGAGAAGCCTGCG...CCCCAAAGTCTCACCTTTTCTTCCAATAGAAAATTCCGCTTGACCTTTGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS-3UTR CAA 90 bp GAGAGTGAAAAAGAGAGAGATATAAGGGCTGAGGGCCAAGCCTCCTCCAATTTTCCTCTCAGGTCAGCCTaGTTCTTCAAGGGCAATCAC +
Preference number: 5 (lower is better)
Translates to: ESEKERDIRAEGQASSNFPLRSA*FFKGNH
Trigger: GTGATTGCCCTTGAAGAACAAGGCTGACCTGAGAGG...AAAATTGGAGGAGGCTTGGCCCTCAGCCCTTATATCTCTCTCTTTTTCACTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329152.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp GTGGCTCGGCCGGGTCCACGGGGGTCAGCGCCGGCTTaGGGCAGGCGGCAGGCAGCTCGCCTTCGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: VARPGPRGSAPA*GRRQAARLRPA
Trigger: AGCTGGGCGAAGGCGAGCTGCCTGCCGCCTGCCTCAAGCCGGCGCTGACCCCCGTGGACCCGGCCGAGCCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp CCGGGATCAGTCCTCCGCAGAGGTCCCAGGGCTGGCTaGGGCCGGGGCAGGGGACGCAGTGGCGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: PGSVLRRGPRAG*GRGRGRSGASC
Trigger: GCAGCTGGCGCCACTGCGTCCCCTGCCCCGGCCTCAGCCAGCCCTGGGACCTCTGCGGAGGACTGATCCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp GCTGGGCACGTCGGGCCACCTGCTGTAGCTTCCCGCTaGAGCCCTGCCGCAGCTCGGCCAGCTCCCGCTCCC +
Preference number: 6 (lower is better)
Translates to: AGHVGPPAVASR*SPAAARPAPAP
Trigger: GGGAGCGGGAGCTGGCCGAGCTGCGGCAGGGCTGCAGCGGGAAGCTACAGCAGGTGGCCCGACGTGCCCAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329152.7
ENST00000337576.7
CDS GCA 72 bp AGGCCCTGCTGGGCGCGCTGGGCACGTCGGGCCACCTaGTGTAGCTTCCCGCTGCAGCCCTGCCGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: RPCWARWARRAT*CSFPLQPCRSS
Trigger: CGAGCTGCGGCAGGGCTGCAGCGGGAAGCTACAGCAGGTGGCCCGACGTGCCCAGCGCGCCCAGCAGGGCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329152.7
ENST00000337576.7
CDS CCA 72 bp TGGGCGCCGCCAAGGGCACAGCCTGTCCCTCCCGGATaGACGGGGGCCGCGGCTGCAGTAGGTGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: WAPPRAQPVPPG*TGAAAAVGGRP
Trigger: AGGCCTGCCACCTACTGCAGCCGCGGCCCCCGTCCATCCGGGAGGGACAGGCTGTGCCCTTGGCGGCGCCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp ATGGACGGGGGCCGCGGCTGCAGTAGGTGGCAGGCCTaGCCTCCCCAAGGTCTTCCCAGCTCGGCCGCACCG +
Preference number: 6 (lower is better)
Translates to: MDGGRGCSRWQA*PPQGLPSSAAP
Trigger: CGGTGCGGCCGAGCTGGGAAGACCTTGGGGAGGGCAGGCCTGCCACCTACTGCAGCCGCGGCCCCCGTCCAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS CCA 72 bp CCCTCCCGGATGGACGGGGGCCGCGGCTGCAGTAGGTaGCAGGCCTGCCCTCCCCAAGGTCTTCCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: PSRMDGGRGCSR*QACPPQGLPSS
Trigger: CGAGCTGGGAAGACCTTGGGGAGGGCAGGCCTGCCACCTACTGCAGCCGCGGCCCCCGTCCATCCGGGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS CCA 72 bp GGAGGGTGGGTAGGCGACGCACATCTGGGTCGCGGGTaGGCGCCGCCAAGGGCACAGCCTGTCCCTCCCGGA +
Preference number: 6 (lower is better)
Translates to: GGWVGDAHLGRG*APPRAQPVPPG
Trigger: TCCGGGAGGGACAGGCTGTGCCCTTGGCGGCGCCCACCCGCGACCCAGATGTGCGTCGCCTACCCACCCTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS CCA 72 bp GGCGAGCGCCTGAGGAAACGGGGGTCTGGGGGAGGGTaGGTAGGCGACGCACATCTGGGTCGCGGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: GERLRKRGSGGG*VGDAHLGRGWA
Trigger: CGCCCACCCGCGACCCAGATGTGCGTCGCCTACCCACCCTCCCCCAGACCCCCGTTTCCTCAGGCGCTCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp CTGGGACCCTCCGAGGCCCGGTCTGCAGGGGCCATGTaGCTCACTCTCGCAGTCGGGGCTCGGCCCGAACCA +
Preference number: 6 (lower is better)
Translates to: LGPSEARSAGAM*LTLAVGARPEP
Trigger: TGGTTCGGGCCGAGCCCCGACTGCGAGAGTGAGGCACATGGCCCCTGCAGACCGGGCCTCGGAGGGTCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 72 bp CGGGTCCTCAAGCCTGGGACCCTCCGAGGCCCGGTCTaGAGGGGCCATGTGCCTCACTCTCGCAGTCGGGGC +
Preference number: 6 (lower is better)
Translates to: RVLKPGTLRGPV*RGHVPHSRSRG
Trigger: GCCCCGACTGCGAGAGTGAGGCACATGGCCCCTGCAGACCGGGCCTCGGAGGGTCCCAGGCTTGAGGACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 72 bp CGCTCCTCCAGTACCTGGGCCACAGCCGCCTCGCTCTaGTCCAGGCTGCGCCGCAGAGCTGCCACCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RSSSTWATAASL*SRLRRRAATSC
Trigger: GCAGGAGGTGGCAGCTCTGCGGCGCAGCCTGGAGCAGAGCGAGGCGGCTGTGGCCCAGGTACTGGAGGAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329152.7
ENST00000337576.7
CDS CCA 72 bp GGGCCGTGGGGCAAAGGCCAGGAGAGGATCCCGCCCTaGGTCAGCGCGCACAGGCAGCGTCTCCAGCTTCGC +
Preference number: 6 (lower is better)
Translates to: GPWGKGQERIPP*VSAHRQRLQLR
Trigger: GCGAAGCTGGAGACGCTGCCTGTGCGCGCTGACCCAGGGCGGGATCCTCTCCTGGCCTTTGCCCCACGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CCA 72 bp AGCCTCGTCGCTCTCGCAGGTGGCCAGAGCATCCTGTaGCTCGGCCGGGTCCACGGGGGTCAGCGCCGGCTT +
Preference number: 6 (lower is better)
Translates to: SLVALAGGQSIL*LGRVHGGQRRL
Trigger: AAGCCGGCGCTGACCCCCGTGGACCCGGCCGAGCCACAGGATGCTCTGGCCACCTGCGAGAGCGACGAGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CAA 90 bp ATCCGGGGCAGGAAGTCGGCCTGCTCCTTCTGGCAGGCGGCCACCTaGTCCTCCAGCTCTTCCCGCTGCCGCATCAGCCGGGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: IRGRKSACSFWQAAT*SSSSSRCRISRAAS
Trigger: GGAGGCGGCCCGGCTGATGCGGCAGCGGGAAGAGCTGGAGGACAAGGTGGCCGCCTGCCAGAAGGAGCAGGCCGACTTCCTGCCCCGGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp CGGGGCAGGGGACGCAGTGGCGCCAGCTGCTGGCACTaGCGGAGCCTCTCTCAGGGCCTGCGTTTCCCACAG +
Preference number: 6 (lower is better)
Translates to: RGRGRSGASCWH*RSLSQGLRFPQ
Trigger: CTGTGGGAAACGCAGGCCCTGAGAGAGGCTCCGTCAGTGCCAGCAGCTGGCGCCACTGCGTCCCCTGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp GGAGGAATGAAGGACCTACCTTGCGGGGCTGCCGCGTaGCAGGCGCCCCGAGGCGGCGAGCGCCTGAGGAAA +
Preference number: 6 (lower is better)
Translates to: GGMKDLPCGAAA*QAPRGGERLRK
Trigger: TTTCCTCAGGCGCTCGCCGCCTCGGGGCGCCTGGCACGCGGCAGCCCCGCAAGGTAGGTCCTTCATTCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp TCTTCCCGCTGCCGCATCAGCCGGGCCGCCTCCTCCTaGAGCTGCTTCTTGTCCTGCTGGGCCACAGCCGCC +
Preference number: 6 (lower is better)
Translates to: SSRCRISRAASS*SCFLSCWATAA
Trigger: GGCGGCTGTGGCCCAGCAGGACAAGAAGCAGCTGCAGGAGGAGGCGGCCCGGCTGATGCGGCAGCGGGAAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp ACGGAAACCAAGGAGGCGGCAGCGGCCACCCCGGCCTaGCGGCGCATCTTAGCCTCGTCGCTCTCGCAGGTG +
Preference number: 6 (lower is better)
Translates to: TETKEAAAATPA*RRILASSLSQV
Trigger: CACCTGCGAGAGCGACGAGGCTAAGATGCGCCGTCAGGCCGGGGTGGCCGCTGCCGCCTCCTTGGTTTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 72 bp CTCCTCTGCGAAATGGGAGGAATGAAGGACCTACCTTaGGGGGCTGCCGCGTGCCAGGCGCCCCGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: LLCEMGGMKDLP*GAAACQAPRGG
Trigger: GCCGCCTCGGGGCGCCTGGCACGCGGCAGCCCCGCAAGGTAGGTCCTTCATTCCTCCCATTTCGCAGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp TGCTTCTTGTCCTGCTGGGCCACAGCCGCCTCGCTCTaGTCCAGGCTGCGCCGCAGAGCTGCCACCTCCTGC +
Preference number: 6 (lower is better)
Translates to: CFLSCWATAASL*SRLRRRAATSC
Trigger: GCAGGAGGTGGCAGCTCTGCGGCGCAGCCTGGAGCAGAGCGAGGCGGCTGTGGCCCAGCAGGACAAGAAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp CTCCCCAGAGCCCAGGTGGCCTGGCCGCCCCATAGATaGCGACGACCCACTCTTGCTGGAGGCCCGTCCACT +
Preference number: 6 (lower is better)
Translates to: LPRAQVAWPPHR*RRPTLAGGPST
Trigger: AGTGGACGGGCCTCCAGCAAGAGTGGGTCGTCGTCATCTATGGGGCGGCCAGGCCACCTGGGCTCTGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CAA 72 bp TCTCCTCTGCGAAATGGGAGGAATGAAGGACCTACCTaGCGGGGCTGCCGCGTGCCAGGCGCCCCGAGGCGG +
Preference number: 6 (lower is better)
Translates to: SPLRNGRNEGPT*RGCRVPGAPRR
Trigger: CCGCCTCGGGGCGCCTGGCACGCGGCAGCCCCGCAAGGTAGGTCCTTCATTCCTCCCATTTCGCAGAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS TCA 72 bp ATTGAGGTAGAGGGAGTTGGCGAGACCCTTGTCCTCTaGGGGGTAGCGGCCCGGCCTCTCCCTGCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: IEVEGVGETLVL*GVAARPLPAGP
Trigger: GGGGCCAGCAGGGAGAGGCCGGGCCGCTACCCCTCAGAGGACAAGGGTCTCGCCAACTCCCTCTACCTCAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CCA 72 bp TCCTCTATCCGGGGCAGGAAGTCGGCCTGCTCCTTCTaGCAGGCGGCCACCTTGTCCTCCAGCTCTTCCCGC +
Preference number: 6 (lower is better)
Translates to: SSIRGRKSACSF*QAATLSSSSSR
Trigger: GCGGGAAGAGCTGGAGGACAAGGTGGCCGCCTGCCAGAAGGAGCAGGCCGACTTCCTGCCCCGGATAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CAA 72 bp TGGCCTGGCCGCCCCATAGATGACGACGACCCACTCTaGCTGGAGGCCCGTCCACTATCGGAGGTCCCCAGG +
Preference number: 6 (lower is better)
Translates to: WPGRPIDDDDPL*LEARPLSEVPR
Trigger: CCTGGGGACCTCCGATAGTGGACGGGCCTCCAGCAAGAGTGGGTCGTCGTCATCTATGGGGCGGCCAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp CTGGAGTCATGGTCCGAGACTTGTCCAGTCCGCCTTTaGGGCCACCAGGGCCCTGCCGTCCCTCAGGAGTCC +
Preference number: 6 (lower is better)
Translates to: LESWSETCPVRL*GHQGPAVPQES
Trigger: GGACTCCTGAGGGACGGCAGGGCCCTGGTGGCCTCAAAGGCGGACTGGACAAGTCTCGGACCATGACTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp GGCCCGAACCAGCTGCGCGACTTTGGAGGGGCCGACTaGGCCATCCCGGACTGCAGTTTTCTCCTTCGCTGC +
Preference number: 6 (lower is better)
Translates to: GPNQLRDFGGAD*AIPDCSFLLRC
Trigger: GCAGCGAAGGAGAAAACTGCAGTCCGGGATGGCTCAGTCGGCCCCTCCAAAGTCGCGCAGCTGGTTCGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 72 bp GCCAGGAGCTTGGGTGGGTGGCTGGGCTCACGATACTaGGGTGGGGCTTTGTCACTGCCACCACTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ARSLGGWLGSRY*GGALSLPPLLL
Trigger: CAGCAGCAGTGGTGGCAGTGACAAAGCCCCACCGCAGTATCGTGAGCCCAGCCACCCACCCAAGCTCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CCA 72 bp GAGCTTGGGTGGGTGGCTGGGCTCACGATACTGCGGTaGGGCTTTGTCACTGCCACCACTGCTGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: ELGWVAGLTILR*GFVTATTAAAA
Trigger: GGCAGCAGCAGCAGTGGTGGCAGTGACAAAGCCCCACCGCAGTATCGTGAGCCCAGCCACCCACCCAAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CAA 72 bp ACCAGCGCAGGCTTCTCTCCTTGCCTTTCCAAGGGGTaGAGGGGCCGACGGGTCCTCAAGCCTGGGACCCTC +
Preference number: 6 (lower is better)
Translates to: TSAGFSPCLSKG*RGRRVLKPGTL
Trigger: GAGGGTCCCAGGCTTGAGGACCCGTCGGCCCCTCAACCCCTTGGAAAGGCAAGGAGAGAAGCCTGCGCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp CGCTCCCTGTGGACCTTGACCCTGCTCAGCTTACCGTaGAGCCCTCTGAGTCCTTCTGTGGGTGCGCGTCCC +
Preference number: 6 (lower is better)
Translates to: RSLWTLTLLSLP*SPLSPSVGARP
Trigger: GGGACGCGCACCCACAGAAGGACTCAGAGGGCTTCACGGTAAGCTGAGCAGGGTCAAGGTCCACAGGGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS TCA 72 bp GGCCCGAACCAGCTGCGCGACTTTGGAGGGGCCGACTaGGCCATCCCGGACTGCAGTTTTCTCCTCTGCGAA +
Preference number: 6 (lower is better)
Translates to: GPNQLRDFGGAD*AIPDCSFLLCE
Trigger: TTCGCAGAGGAGAAAACTGCAGTCCGGGATGGCTCAGTCGGCCCCTCCAAAGTCGCGCAGCTGGTTCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp CAACCCCCAGGGCTCCATGCACATAGCCCCCAGCGTTaGTCAGCTCAGCTCAGCTCAGCTCAGCTCAGCGTT +
Preference number: 6 (lower is better)
Translates to: QPPGLHAHSPQR*SAQLSSAQLSV
Trigger: AACGCTGAGCTGAGCTGAGCTGAGCTGAGCTGAGCAACGCTGGGGGCTATGTGCATGGAGCCCTGGGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp TCCCACCACCCCAGCCAAGTCAACCCGGCACCGCTCTaGCCCTCAGTGTCCCCTTCCCTACAATGGGTACAA +
Preference number: 6 (lower is better)
Translates to: SHHPSQVNPAPL*PSVSPSLQWVQ
Trigger: TTGTACCCATTGTAGGGAAGGGGACACTGAGGGGCAGAGCGGTGCCGGGTTGACTTGGCTGGGGTGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp CACTTAGTTTCCTCTATCCGGGGCAGGAAGTCGGCCTaGTCCTTCTGGCAGGCGGCCACCTTGTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: HLVSSIRGRKSA*SFWQAATLSSS
Trigger: GCTGGAGGACAAGGTGGCCGCCTGCCAGAAGGAGCAGGCCGACTTCCTGCCCCGGATAGAGGAAACTAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp CGGACTGCAGTTTTCTCCTCTGCGAAATGGGAGGAATaGAGGACCTACCTTGCGGGGCTGCCGCGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RTAVFSSAKWEE*RTYLAGLPRAR
Trigger: CCTGGCACGCGGCAGCCCCGCAAGGTAGGTCCTTCATTCCTCCCATTTCGCAGAGGAGAAAACTGCAGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS GCA 72 bp AAGTGGAAGCTCACTACCAGCGCAGGCTTCTCTCCTTaGCTTTCCAAGGGGTTGAGGGGCCGACGGGTCCTC +
Preference number: 6 (lower is better)
Translates to: KWKLTTSAGFSP*LSKGLRGRRVL
Trigger: GAGGACCCGTCGGCCCCTCAACCCCTTGGAAAGGCAAGGAGAGAAGCCTGCGCTGGTAGTGAGCTTCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CCA 72 bp CTAGTGGTTCTGAGCACTGGTCTAGCTTGCCAGAGGTaGCCAGGAGCTTGGGTGGGTGGCTGGGCTCACGAT +
Preference number: 6 (lower is better)
Translates to: LVVLSTGLACQR*PGAWVGGWAHD
Trigger: ATCGTGAGCCCAGCCACCCACCCAAGCTCCTGGCCACCTCTGGCAAGCTAGACCAGTGCTCAGAACCACTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CAA 72 bp GAAGTGGAAGCTCACTACCAGCGCAGGCTTCTCTCCTaGCCTTTCCAAGGGGTTGAGGGGCCGACGGGTCCT +
Preference number: 6 (lower is better)
Translates to: EVEAHYQRRLLS*PFQGVEGPTGP
Trigger: AGGACCCGTCGGCCCCTCAACCCCTTGGAAAGGCAAGGAGAGAAGCCTGCGCTGGTAGTGAGCTTCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp AGACATCGGTGTGGTCACTGCCCCGCAGCTCACCATTaGGGTAGAGGGAGTTGGCGAGACCCTTGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: RHRCGHCPAAHH*GRGSWRDPCPL
Trigger: CAGAGGACAAGGGTCTCGCCAACTCCCTCTACCTCAATGGTGAGCTGCGGGGCAGTGACCACACCGATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CCA 72 bp TCAAAATGCCGAGTGCCCAGGTCGATCAGATTTCTGTaGACTCAATGCGCTCGAGGCGGGAGGGGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SKCRVPRSIRFL*TQCARGGRGSR
Trigger: CCTGGACCCCCTCCCGCCTCGAGCGCATTGAGTCCACAGAAATCTGATCGACCTGGGCACTCGGCATTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS GCA 72 bp AGCTCAGCTCAGCTCAGCGTTCCATTCCTAAACTTCTaGCTTAGCCCCACCTCCGCCATGAGCTTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: SSAQLSVPFLNF*LSPTSAMSFPG
Trigger: GCCTGGGAAGCTCATGGCGGAGGTGGGGCTAAGGCAGAAGTTTAGGAATGGAACGCTGAGCTGAGCTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329152.7
CDS CAA 90 bp GGGCACAAATTCTGCATGGAGTGGAAATTCTTGGGTACGACAGGCTaGAAGGCCGACGGCCGAACTAGTGGTTCTGAGCACTGGTCTAGC +
Preference number: 6 (lower is better)
Translates to: GHKFCMEWKFLGTTG*KADGRTSGSEHWSS
Trigger: GCTAGACCAGTGCTCAGAACCACTAGTTCGGCCGTCGGCCTTCAAGCCTGTCGTACCCAAGAATTTCCACTCCATGCAGAATTTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp TCTGCATGGAGTGGAAATTCTTGGGTACGACAGGCTTaGAGGCCGACGGCCGAACTAGTGGTTCTGAGCACT +
Preference number: 6 (lower is better)
Translates to: SAWSGNSWVRQA*RPTAELVVLST
Trigger: AGTGCTCAGAACCACTAGTTCGGCCGTCGGCCTTCAAGCCTGTCGTACCCAAGAATTTCCACTCCATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS CAA 72 bp TTCTGCATGGAGTGGAAATTCTTGGGTACGACAGGCTaGAAGGCCGACGGCCGAACTAGTGGTTCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: FCMEWKFLGTTG*KADGRTSGSEH
Trigger: GTGCTCAGAACCACTAGTTCGGCCGTCGGCCTTCAAGCCTGTCGTACCCAAGAATTTCCACTCCATGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329152.7
ENST00000337576.7
ENST00000360342.7
ENST00000645462.1
CDS TCA 72 bp CTACAATGGGTACAAAAAGTTCCCAGGCATCCAAGGTaGAGGAATAAGGCTGGGATAAAAGAGAGAACTTGG +
Preference number: 6 (lower is better)
Translates to: LQWVQKVPRHPR*RNKAGIKERTW
Trigger: CCAAGTTCTCTCTTTTATCCCAGCCTTATTCCTTCACCTTGGATGCCTGGGAACTTTTTGTACCCATTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329152.7