RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LZTS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000107816

Ensembl transcript IDs: ENST00000370220.1, ENST00000370223.7, ENST00000426584.5, ENST00000429732.5, ENST00000454422.1, ENST00000481129.1, ENST00000489526.1

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTTCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTaGACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGAATGAAGTG +
Preference number: 1 (lower is better)
Translates to: FFFPAPLAGVGWKRL*TGLAVALAAVGNEV
Trigger: CACTTCATTCCCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 90 bp CCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTaGCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCC +
Preference number: 1 (lower is better)
Translates to: PWLEWAGSACEQGWQ*HWQRWGMKWVVTRA
Trigger: GGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 90 bp CTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTaGCAGTGGCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACA +
Preference number: 1 (lower is better)
Translates to: LLPWLEWAGSACEQG*QWHWQRWGMKWVVT
Trigger: TGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 90 bp CTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTaGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: LEWAGSACEQGWQWH*QRWGMKWVVTRASG
Trigger: CCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR TCA 90 bp CCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCTaGGTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAG +
Preference number: 1 (lower is better)
Translates to: PLSGLILLLQVIGPP*VLGRSPEAWILGDK
Trigger: CTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAACTCAGGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 90 bp CGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCTGAGTTCTTaGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTG +
Preference number: 1 (lower is better)
Translates to: RSDLAPPSHRATLSS*QKPRGLDPRRQVAL
Trigger: CAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAACTCAGGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTaGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCT +
Preference number: 1 (lower is better)
Translates to: ALAAVGNEVGSNKSL*VTVNTGTFERSDLA
Trigger: AGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR GCA 90 bp TATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTaGTTGGTCACAAACACAAATAAACAAGACATTTCTGAGTTCTTC +
Preference number: 1 (lower is better)
Translates to: YTSENEAINLGEGRG*LVTNTNKQDISEFF
Trigger: GAAGAACTCAGAAATGTCTTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR TCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTGGCTGGAAGCGCCTGTaGACAGGGTTGGCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: RAQARPCPPMWAGTSGAAGWKRL*TGLAVA
Trigger: TGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCC...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTCAGCTGCTGCCCCTCTaGCAGAGCTCCCTACAGAGC +
Preference number: 2 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSQLLPL*QSSLQS
Trigger: GCTCTGTAGGGAGCTCTGCCAGAGGGGCAGCAGCTG...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR GCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGGGGCCTAAGTGGATCTaGAGCTGCTGCCCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRGPKWI*SCCPSG
Trigger: GCCAGAGGGGCAGCAGCTGCAGATCCACTTAGGCCC...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCCCTGCTCCCCTGGCTaGAGTGGGCTGGAAGCGCCT +
Preference number: 2 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAPCSPG*SGLEAP
Trigger: AGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR GCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCGGGCCTAAGTGGATCTaGAGCTGCTGCCCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGGPKWI*SCCPSG
Trigger: GCCAGAGGGGCAGCAGCTGCAGATCCACTTAGGCCC...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGACCCTGCTCCCCTGGCTaGAGTGGGCTGGAAGCGCCT +
Preference number: 2 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRPCSPG*SGLEAP
Trigger: AGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCGCCATCCGTGGACCCTaGGGCCTAAGTGGATCTGCA +
Preference number: 2 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGAIRGP*GLSGSA
Trigger: TGCAGATCCACTTAGGCCCCAGGGTCCACGGATGGC...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCCTTTGGGGCCATCCGTaGACCCTGGGGCCTAAGTGG +
Preference number: 2 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSLWGHP*TLGPKW
Trigger: CCACTTAGGCCCCAGGGTCCACGGATGGCCCCAAAG...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGAGTAACAAGAGCCTCTaGGTAACAGTGAACACGGGG +
Preference number: 2 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQSNKSL*VTVNTG
Trigger: CCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACT...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTGCCTGTGAACAGGGTTaGCAGTGGCACTGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAACEQG*QWHWQR
Trigger: CCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGC...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAATCTTCCCTGCTCCCCTaGCTGGAGTGGGCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQSSLLP*LEWAGS
Trigger: GCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGACAGCTGCTGCCCCTCTaGCAGAGCTCCCTACAGAGC +
Preference number: 2 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRQLLPL*QSSLQS
Trigger: GCTCTGTAGGGAGCTCTGCCAGAGGGGCAGCAGCTG...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAGCCATCCGTGGACCCTaGGGCCTAAGTGGATCTGCA +
Preference number: 2 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQAIRGP*GLSGSA
Trigger: TGCAGATCCACTTAGGCCCCAGGGTCCACGGATGGC...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCGGAGACAAGTGGCTTTaGGGCCCTCAGCCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: VNTGTFERSDLAPPSHRAGDKWL*GPQPLG
Trigger: CCCCAAAGGCTGAGGGCCCCAAAGCCACTTGTCTCC...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCGCCACCCTGAGTTCTTaGCAGAAGCCCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSATLSS*QKPRGL
Trigger: CAGGCCTCTGGGCTTCTGCCAAGAACTCAGGGTGGC...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGAACAGGGTTGGCAGTaGCACTGGCAGCGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: SSSFGLTSAPSLQERGCREQGWQ*HWQRWG
Trigger: TCCCCACCGCTGCCAGTGCCACTGCCAACCCTGTTC...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR GCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCATCCGGAGCAGCTGGTaGCATCTGGCTTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSIRSSW*HLAFSG
Trigger: GCCAGAGAAAGCCAGATGGCACCAGCTGCTCCGGAT...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCCACATCCGGAGCAGCTaGTGCCATCTGGCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSHIRSS*CHLAFS
Trigger: AGAGAAAGCCAGATGGCACCAGCTGCTCCGGATGTG...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR GCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGATGGATCTGCAGCTGCTaGCCCTCTGGCAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGWICSC*PSGRAP
Trigger: GGGAGCTCTGCCAGAGGGGCAGCAGCTGCAGATCCA...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAATCCTAGGAGACAAGTaGCTTTGGGGCCCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRILGDK*LWGPQP
Trigger: AGGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGAT...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGATGGCACTGGCAGCGGTaGGGAATGAAGTGGGTAGTA +
Preference number: 2 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRWHWQR*GMKWVV
Trigger: TACTACCCACTTCATTCCCCACCGCTGCCAGTGCCA...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR TCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGGTCATAGGGCCACCCTaGGTTCTTGGCAGAAGCCCA +
Preference number: 2 (lower is better)
Translates to: DISEFFLWSDFSPLTPGEVIGPP*VLGRSP
Trigger: TGGGCTTCTGCCAAGAACTCAGGGTGGCCCTATGAC...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR GCA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGTGGATCTGCAGCTGCTaGCCCTCTGGCAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQWICSC*PSGRAP
Trigger: GGGAGCTCTGCCAGAGGGGCAGCAGCTGCAGATCCA...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGGAGACAAGTGGCTTTaGGGCCCTCAGCCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGGDKWL*GPQPLG
Trigger: CCCCAAAGGCTGAGGGCCCCAAAGCCACTTGTCTCC...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCAGTAACAAGAGCCTCTaGGTAACAGTGAACACGGGG +
Preference number: 2 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSSNKSL*VTVNTG
Trigger: CCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACT...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGCCCTGTCCCCCAATGTaGGCAGGCACATCCGGAGCA +
Preference number: 2 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQPCPPM*AGTSGA
Trigger: TGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGG...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGATCCTAGGAGACAAGTaGCTTTGGGGCCCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: DISEFFLWSDFSPLTPGEILGDK*LWGPQP
Trigger: AGGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGAT...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGAAGCCCAGAGGCCTaGATCCTAGGAGACAAGTGG +
Preference number: 2 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHRSPEA*ILGDKW
Trigger: CCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCT...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGCCACCCTGAGTTCTTaGCAGAAGCCCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQATLSS*QKPRGL
Trigger: CAGGCCTCTGGGCTTCTGCCAAGAACTCAGGGTGGC...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGCACATCCGGAGCAGCTaGTGCCATCTGGCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQHIRSS*CHLAFS
Trigger: AGAGAAAGCCAGATGGCACCAGCTGCTCCGGATGTG...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CCA 90 bp CAGTGTGAAAAATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGACGGTGGGGAATGAAGTaGGTAGTAACAAGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: QCEKYTSENEAINLGEGRRWGMK*VVTRAS
Trigger: AGAGGCTCTTGTTACTACCCACTTCATTCCCCACCG...TCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTTTTCACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CAA 90 bp ACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGGCTGCTaGGTCACAAACACAAATAAACAAGACATTTCTGAGTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: TSENEAINLGEGRGC*VTNTNKQDISEFFL
Trigger: AAGGAAGAACTCAGAAATGTCTTGTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR GCA 72 bp CCGTGGACCCTGGGGCCTAAGTGGATCTGCAGCTGCTaGCCCTCTGGCAGAGCTCCCTACAGAGCTGGTTGC +
Preference number: 3 (lower is better)
Translates to: PWTLGPKWICSC*PSGRAPYRAGC
Trigger: GCAACCAGCTCTGTAGGGAGCTCTGCCAGAGGGGCAGCAGCTGCAGATCCACTTAGGCCCCAGGGTCCACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR GCA 72 bp CATCCGTGGACCCTGGGGCCTAAGTGGATCTGCAGCTaGTGCCCCTCTGGCAGAGCTCCCTACAGAGCTGGT +
Preference number: 3 (lower is better)
Translates to: HPWTLGPKWICS*CPSGRAPYRAG
Trigger: ACCAGCTCTGTAGGGAGCTCTGCCAGAGGGGCAGCAGCTGCAGATCCACTTAGGCCCCAGGGTCCACGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 72 bp AGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTaGGGCCCTCAGCCTTTGGGGCCATCCGTGGACCCT +
Preference number: 3 (lower is better)
Translates to: SPEAWILGDKWL*GPQPLGPSVDP
Trigger: AGGGTCCACGGATGGCCCCAAAGGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 72 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTaGCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTA +
Preference number: 3 (lower is better)
Translates to: EWAGSACEQGWQ*HWQRWGMKWVV
Trigger: TACTACCCACTTCATTCCCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 72 bp GCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTaGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGG +
Preference number: 3 (lower is better)
Translates to: ACEQGWQWHWQR*GMKWVVTRASG
Trigger: CCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CAA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAAGGAGACAAGTGGCTTaGGGGCCCTCAGCCTTTGGG +
Preference number: 3 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRRRQVA*GPSAFG
Trigger: CCCAAAGGCTGAGGGCCCCAAAGCCACTTGTCTCCT...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CAA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTAGGAGACAAGTGGCTTaGGGGCCCTCAGCCTTTGGG +
Preference number: 3 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSRRQVA*GPSAFG
Trigger: CCCAAAGGCTGAGGGCCCCAAAGCCACTTGTCTCCT...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR TCA 72 bp GGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCTaGGTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTA +
Preference number: 3 (lower is better)
Translates to: GLILLLQVIGPP*VLGRSPEAWIL
Trigger: TAGGATCCAGGCCTCTGGGCTTCTGCCAAGAACTCAGGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 72 bp CTTGCTCCTCCAAGTCATAGGGCCACCCTGAGTTCTTaGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAA +
Preference number: 3 (lower is better)
Translates to: LAPPSHRATLSS*QKPRGLDPRRQ
Trigger: TTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAACTCAGGGTGGCCCTATGACTTGGAGGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR CCA 72 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTaGGTAACAGTGAACACGGGGACCTTTGAGCGGTCT +
Preference number: 3 (lower is better)
Translates to: AVGNEVGSNKSL*VTVNTGTFERS
Trigger: AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
3UTR-3UTR CAA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACATTGAGCGGTCTGATCTaGCTCCTCCAAGTCATAGGG +
Preference number: 3 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTLSGLI*LLQVIG
Trigger: CCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAA...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTTGTGCCCGCTGTGCCTaGGCCGCACAGTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RAQARPCPPMWAGTSGAACARCA*AAQSSR
Trigger: GCGAGAGGACTGTGCGGCCCAGGCACAGCGGGCACA...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTCGCAATCGCTCCACCTaGGCCCGCAAGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RAQARPCPPMWAGTSGAARNRST*ARKLPP
Trigger: TGGGGGCAGCTTGCGGGCCCAGGTGGAGCGATTGCG...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCACGCGGCGGCGGCGGTaGTCACCCTCAACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPTRRRR*SPSTPA
Trigger: GGCTGGGGTTGAGGGTGACCACCGCCGCCGCCGCGT...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTCTGTCCCGCAGCTGCTaGAGCTCTGCCTCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: RAQARPCPPMWAGTSGAALSRSC*SSASRS
Trigger: AGACCGGGAGGCAGAGCTTCAGCAGCTGCGGGACAG...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGCCTGGGCCCGCAAGCTaGCCCCAACCCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWPGPAS*PQPRLL
Trigger: CAGCAGCCGGGGTTGGGGGCAGCTTGCGGGCCCAGG...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGCGCACGTAGGGGCTaGTCGGCGGCAGTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWGARRG*SAAVGS
Trigger: GCTCCCGACTGCCGCCGAGCAGCCCCTACGTGCGCC...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCCCTCCGACGCCCTGTaGCTGCGTGTCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGPSDAL*LRVWGL
Trigger: GAGCCCCCAGACACGCAGTCACAGGGCGTCGGAGGG...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTCCAATCGGTGAGGCCTaGAGGCCTGAAGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RAQARPCPPMWAGTSGAAPIGEA*RPEGAS
Trigger: GGAGGCTCCTTCAGGCCTTCAGGCCTCACCGATTGG...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCCTCACGCTCTCGCTaGCAGTGCCGCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWASRSR*QCRCRS
Trigger: GGAGCGGCAGCGGCACTGGCAGCGAGAGCGTGAGGC...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCTGTTGGGCCCGCTGTaGCCGCTGTGCCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRLLGPL*PLCLGR
Trigger: GCGGCCCAGGCACAGCGGGCACAGCGGGCCCAACAG...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCCTGGGCCCGCAAGCTaGCCCCAACCCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWPGPAS*PQPRLL
Trigger: CAGCAGCCGGGGTTGGGGGCAGCTTGCGGGCCCAGG...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCCAGATGCAGGGGGCCTaGTCGGCCAGGCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPQMQGA*SARPRS
Trigger: TGACCTGGGCCTGGCCGAGCAGGCCCCCTGCATCTG...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGGGTGGGCCGCGGAGGTaGGCATTGTGTGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQGGPRR*ALCARC
Trigger: GCAGCGGGCACACAATGCCCACCTCCGCGGCCCACC...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTCGCCTGGGGAGCTGGTaGTTGGCTCGGCACCTCCGG +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSRLGSW*LARHLR
Trigger: CCGGAGGTGCCGAGCCAACCACCAGCTCCCCAGGCG...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGCTCCCGCTCCAAGGTaGCGCAGCGCCGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGAPAPR*RSAAPA
Trigger: AGCTGGAGCGGCGCTGCGCCACCTTGGAGCGGGAGC...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTCTTTGGGGCCATCCGTaGACCCTGGGGCCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: RAQARPCPPMWAGTSGAALWGHP*TLGPKW
Trigger: CCACTTAGGCCCCAGGGTCCACGGATGGCCCCAAAG...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGACCGGCCACTGTCTaGGTGGGAGGGCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSGPATV*VGGPSR
Trigger: CCTACTGGGCCCTCCCACTCAGACAGTGGCCGGTCC...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGAGGCGGGGGTGGTGGTaGGCGCTCCCCACAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWRRGWW*ALPTGA
Trigger: AGCTCCTGTGGGGAGCGCTCACCACCACCCCCGCCT...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGGCCCCCAACCCCGGCTaGTGCCCGCTGCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRAPNPG*CPLHFG
Trigger: GCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGGGGC...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCCTAGGGGGCACAGCTaGGCACAGCGGCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGPRGHS*AQRLLC
Trigger: GCACAGGAGCCGCTGTGCCCAGCTGTGCCCCCTAGG...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGAGGCAGGTGCCCGCCTaGGGAGCTGGTGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGRQVPA*GAGGWL
Trigger: GAGCCAACCACCAGCTCCCCAGGCGGGCACCTGCCT...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCCTCGCCCAGAGCCATaGGAAGGCAGGTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGPRPEP*EGRCPP
Trigger: AGGCGGGCACCTGCCTTCCCATGGCTCTGGGCGAGG...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTCCACCGCGCATAAGTTaGGGGCTCCCCAGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSPPRIS*GLPRPP
Trigger: AGGCGGCCTGGGGAGCCCCCAACTTATGCGCGGTGG...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCAAGAGGTGTCCACGCTaGGGCAGGAGCTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPKRCPR*GRSCGE
Trigger: CTCCCCGCAGCTCCTGCCCCAGCGTGGACACCTCTT...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCCTCCCCAGCACTCCCTaGGCAATCACTCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPLPSTP*AITLAQ
Trigger: CTGGGCCAGAGTGATTGCTCAGGGAGTGCTGGGGAG...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCGCTGCCAGTGCCGCTaGCGCTCCTCGTATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWRCQCR*RSSYAW
Trigger: CCAGGCATACGAGGAGCGGCAGCGGCACTGGCAGCG...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGCGCTCTCGCTGCCAGTaGCGCTGCCGCTCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWRSRCQ*RCRSSY
Trigger: ATACGAGGAGCGGCAGCGGCACTGGCAGCGAGAGCG...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCCCGGCTGCTGCCCGCTaGACTTTGGCCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPPAAAR*TLASSL
Trigger: GAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGG...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGTCACCTCCGCCGCGCTaGTCCATGCTCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWSPPPR*SMLSPR
Trigger: CCTGGGGCTGAGCATGGAGCAGCGCGGCGGAGGTGA...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGGCCAAGGCCAGGCAGTaGCCTGCCTCCCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWAKARQ*PASLCW
Trigger: CCAGCAGAGGGAGGCAGGGCACTGCCTGGCCTTGGC...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGAGCTGCAGCAGCTGTTaGGCCCGCTGTGCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWSCSSC*ARCARC
Trigger: ACAGCGGGCACAGCGGGCCCAACAGCTGCTGCAGCT...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGAGCTGCAGCAGCTGTTaGGCCCGCTGTGCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQSCSSC*ARCARC
Trigger: ACAGCGGGCACAGCGGGCCCAACAGCTGCTGCAGCT...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCTGCAGAGCTCAAACCTaGGAACCGAGCCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPCRAQT*EPSPGP
Trigger: CGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCA...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTCCCTGCCTTCACCTCTaGAGGCTGCTCCAAAACCTC +
Preference number: 4 (lower is better)
Translates to: RAQARPCPPMWAGTSGAAPCLHL*RLLQNL
Trigger: GAGGTTTTGGAGCAGCCTCCAGAGGTGAAGGCAGGG...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGGGACAGGGCCGGCCTaGGATAAGGCTGCTCACACT +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGGTGPA*DKAAHT
Trigger: AGTGTGAGCAGCCTTATCTCAGGCCGGCCCTGTCCC...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGGCAGGCTGGACAGTaGGTTTCGGCCAGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSGQAGQ*VSARVG
Trigger: TCCGACTCTGGCCGAAACTCACTGTCCAGCCTGCCC...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGGCTGGAAGCGCCTGTaGACAGGGTTGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGGWKRL*TGLAVA
Trigger: TGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCC...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGCTGGAAGCGCCTGTaGACAGGGTTGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWGWKRL*TGLAVA
Trigger: TGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCC...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCTTCCGGCCCCGCTCCTaGTCCAGCGCGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPFRPRS*SSAPTS
Trigger: GGAGGTGGGCGCGCTGGAGCAGGAGCGGGGCCGGAA...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370223.7
CDS-3UTR GCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCGCTCGGCACCTCCGGTaGTGTAGGTGGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSAARHLR*CRWAGW
Trigger: CCAGCCTGCCCACCTACAGCACCGGAGGTGCCGAGC...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGAGCCACCAGCTCGCTaGCCTTCTGCACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSEPPAR*PSAPAL
Trigger: CAGAGCTGGTGCAGAAGGGCAGCGAGCTGGTGGCTC...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCGCTGGCGGAAGAAGGTaGGCCCAGGAGGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSAAGGRR*AQEGRG
Trigger: ACCACGGCCCTCCTGGGCCCACCTTCTTCCGCCAGC...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCAGCCTGTGCTCTTGCTaGAGGAGGACCGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPSLCSC*RRTGHC
Trigger: ACAGTGGCCGGTCCTCCTCCAGCAAGAGCACAGGCT...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGGGCACACCTCCCACTTaGTCTCCTCAAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQGTPPT*SPQASA
Trigger: GGCCGAGGCTTGAGGAGACCAAGTGGGAGGTGTGCC...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTAGCTGCTCAGCTTCCTaGCGGTGTCGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSSCSAS*RCRCSS
Trigger: GGAGCTGCAGCGACACCGCCAGGAAGCTGAGCAGCT...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGGGAATGGGTCAGCGGTaGCAGGTGGCACAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRGMGQR*QVAQGA
Trigger: AGCCCCCTGTGCCACCTGCCACCGCTGACCCATTCC...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGAACAGGGTTGGCAGTaGCACTGGCAGCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSEQGWQ*HWQRWG
Trigger: TCCCCACCGCTGCCAGTGCCACTGCCAACCCTGTTC...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCCTGTGAACAGGGTTaGCAGTGGCACTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWACEQG*QWHWQR
Trigger: CCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGC...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGCTCCCCTGGCTGGAGTaGGCTGGAAGCGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQLPWLE*AGSACE
Trigger: TTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAG...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGTGCAGAGCTCAAACCTaGGAACCGAGCCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGCRAQT*EPSPGP
Trigger: CGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCA...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGGCAGCACTGGCTTaGAGGCTGTTGGGCGGATCA +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQWAALA*RLLGGS
Trigger: TGATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCA...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGTCCTGGCGGTGTCGCTaGAGCTCCTGGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWSWRCR*SSWEQA
Trigger: AGCCTGTTCCCAGGAGCTGCAGCGACACCGCCAGGA...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTAGCTCCAGGCTGAGCTaGTGCAGCTCCTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSSSRLS*CSSCSS
Trigger: GCTAGAGCAGGAGCTGCAGCAGCTCAGCCTGGAGCT...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCAGGCTCCAGTGGCACTaGCAGAGTCTGCACAATGGC +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPRLQWH*QSLHNG
Trigger: GCCATTGTGCAGACTCTGCCAGTGCCACTGGAGCCT...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCCACACTACCCATGACTaGAGCTTGTGGGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPHTTHD*SLWGSG
Trigger: GCCACTGCCCCACAAGCTCCAGTCATGGGTAGTGTG...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTCATCACTGCTTGGGCTaGGGGGTGACTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSHHCLG*GVTLSG
Trigger: TCCGGACAGAGTCACCCCCCAGCCCAAGCAGTGATG...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGATGAGCTTTGGTGGTaGGCCGCGGAGGTGGGCATT +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWDELWW*AAEVGI
Trigger: AATGCCCACCTCCGCGGCCCACCACCAAAGCTCATC...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCGCCCGCCTGGGGAGCTaGTGGTTGGCTCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGARLGS*WLARHL
Trigger: GAGGTGCCGAGCCAACCACCAGCTCCCCAGGCGGGC...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCGCTCCCGCTCCAAGGTaGCGCAGCGCCGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGAPAPR*RSAAPA
Trigger: AGCTGGAGCGGCGCTGCGCCACCTTGGAGCGGGAGC...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGGGCACACCTCCCACTTaGTCTCCTCAAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRGTPPT*SPQASA
Trigger: GGCCGAGGCTTGAGGAGACCAAGTGGGAGGTGTGCC...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCCATCCGTGGACCCTaGGGCCTAAGTGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWAIRGP*GLSGSA
Trigger: TGCAGATCCACTTAGGCCCCAGGGTCCACGGATGGC...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGGCCGGCTCCCGCTCTTaGAGCCCGAAAGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRAGSRS*SPKEKE
Trigger: CTCCTTCTCTTTCGGGCTCCAAGAGCGGGAGCCGGC...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGCTCACACTACCCATaGCTGGAGCTTGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQCSHYP*LELVGQ
Trigger: CTGCCCCACAAGCTCCAGTCATGGGTAGTGTGAGCA...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGTGGGCAGCACTGGCTTaGAGGCTGTTGGGCGGATCA +
Preference number: 4 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRWAALA*RLLGGS
Trigger: TGATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCA...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCGGACCGGCCACTGTCTaGGTGGGAGGGCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGGPATV*VGGPSR
Trigger: CCTACTGGGCCCTCCCACTCAGACAGTGGCCGGTCC...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGTCATAGGGCCACCCTaGGTTCTTGGCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSVIGPP*VLGRSP
Trigger: TGGGCTTCTGCCAAGAACTCAGGGTGGCCCTATGAC...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCGACCCAGCGCCACCTaGGCCTCGGCTCCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRARPSAT*ASAPVP
Trigger: CGGAACTGGAGCCGAGGCGCAGGTGGCGCTGGGTCG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370223.7
CDS-3UTR GCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGCCCAGCCACTAAATaGCAGGGGTTTGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWGPATK*QGFVSS
Trigger: GCTGCTGACAAACCCCTGGCATTTAGTGGCTGGGCC...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCATGGGAAGGCAGGTaGCCGCCTGGGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGPWEGR*PPGELV
Trigger: CACCAGCTCCCCAGGCGGGCACCTGCCTTCCCATGG...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTGCCTCACGCTCTCGCTaGCAGTGCCGCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAASRSR*QCRCRS
Trigger: GGAGCGGCAGCGGCACTGGCAGCGAGAGCGTGAGGC...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGACTGTTGGGCCCGCTGTaGCCGCTGTGCCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRLLGPL*PLCLGR
Trigger: GCGGCCCAGGCACAGCGGGCACAGCGGGCCCAACAG...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCTGTGCGAAGTCGTCCTaGAATTGCCGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPCAKSS*NCRFSC
Trigger: GCAGGAGAAGCGGCAATTGCAGGACGACTTCGCACA...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGGCCCGAGCTCCCGCTaGTCCCGCTCCAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTGPSSR*SRSKVA
Trigger: CGCCACCTTGGAGCGGGAGCAGCGGGAGCTCGGGCC...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCGAGCCACCAGCTCGCTaGCCTTCTGCACCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSAEPPAR*PSAPAL
Trigger: CAGAGCTGGTGCAGAAGGGCAGCGAGCTGGTGGCTC...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGGGCCTCATCACTCTCTaGCAGGAGGAATGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQGLITL*QEEWVS
Trigger: GCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCC...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGCTCTAGCTGCCGGTTaGGCCGGTACATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGALAAG*AGTSGC
Trigger: ACATCCAGATGTACCGGCGCAACCGGCAGCTAGAGC...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGTCCAGGCTGAGCTGCTaGAGCTCCTGCTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRSRLSC*SSCSSC
Trigger: GCAGCTAGAGCAGGAGCTGCAGCAGCTCAGCCTGGA...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCTGGATCTGCAGCTGCTaGCCCTCTGGCAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSAWICSC*PSGRAP
Trigger: GGGAGCTCTGCCAGAGGGGCAGCAGCTGCAGATCCA...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGATCCGGAGCAGCTGGTaGCATCTGGCTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQIRSSW*HLAFSG
Trigger: GCCAGAGAAAGCCAGATGGCACCAGCTGCTCCGGAT...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCCACGAGTTCCCATTCTaGGGCGGGAAGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSAHEFPF*GGKPGA
Trigger: GGCTCCTGGCTTCCCGCCGCAGAATGGGAACTCGTG...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCGGCTGGCACCTCTGTTaGATTTCCCCACTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPGWHLC*ISPLQR
Trigger: TCGCTGAAGTGGGGAAATGCAACAGAGGTGCCAGCC...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGGGGAGGAAGGTAGATaGCCTGCCTTCACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGGEEGR*PAFTSG
Trigger: TCCAGAGGTGAAGGCAGGGCATCTACCTTCCTCCCC...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGGCCCAAGCCCAATCCTaGATCCTCCACAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWAQAQS*ILHRGQ
Trigger: CTGGCCTCTGTGGAGGATGCAGGATTGGGCTTGGGC...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGAGGCTCCAGTGGCACTaGCAGAGTCTGCACAATGGC +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGRLQWH*QSLHNG
Trigger: GCCATTGTGCAGACTCTGCCAGTGCCACTGGAGCCT...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCACACTACCCATGACTaGAGCTTGTGGGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGHTTHD*SLWGSG
Trigger: GCCACTGCCCCACAAGCTCCAGTCATGGGTAGTGTG...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAGGTGGGCCGCGGAGGTaGGCATTGTGTGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQGGPRR*ALCARC
Trigger: GCAGCGGGCACACAATGCCCACCTCCGCGGCCCACC...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGAGGTTTGGGCAGCACTaGCTTGAAGGCTGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQRFGQH*LEGCWA
Trigger: CGCCCAACAGCCTTCAAGCCAGTGCTGCCCAAACCT...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCCGCCTGGGGAGCTGGTaGTTGGCTCGGCACCTCCGG +
Preference number: 4 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSRLGSW*LARHLR
Trigger: CCGGAGGTGCCGAGCCAACCACCAGCTCCCCAGGCG...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCAGGCAGGTGCCCGCCTaGGGAGCTGGTGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGRQVPA*GAGGWL
Trigger: GAGCCAACCACCAGCTCCCCAGGCGGGCACCTGCCT...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCCTCTGCCAGGAGGAATaGGTCAGCGGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSALCQEE*VSGGRW
Trigger: CCACCTGCCACCGCTGACCCATTCCTCCTGGCAGAG...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCATCCTAGGAGACAAGTaGCTTTGGGGCCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPILGDK*LWGPQP
Trigger: AGGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGAT...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCTCTTCCCTGCTCCCCTaGCTGGAGTGGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSASSLLP*LEWAGS
Trigger: GCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGTTGAGGGCCCATTGGTaGGGGGAGCCTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWLRAHW*GEPVSF
Trigger: GAAGGAAACAGGCTCCCCCCACCAATGGGCCCTCAA...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCCTGTCCCGCAGCTGCTaGAGCTCTGCCTCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPLSRSC*SSASRS
Trigger: AGACCGGGAGGCAGAGCTTCAGCAGCTGCGGGACAG...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGATCAGTAACAAGCCCTaGTCCCCACCAAGACTCCCC +
Preference number: 4 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQISNKP*SPPRLP
Trigger: GGGGAGTCTTGGTGGGGATCAGGGCTTGTTACTGAT...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAGGGCCCCCAAACAGCTaGGTCAGGCTGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQGPPNS*VRLPWL
Trigger: GAGCCAGGGCAGCCTGACGCAGCTGTTTGGGGGCCC...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGGGCCCAGCCACTAAATaGCAGGGGTTTGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWGPATK*QGFVSS
Trigger: GCTGCTGACAAACCCCTGGCATTTAGTGGCTGGGCC...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTGCTCGGCACCTCCGGTaGTGTAGGTGGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAARHLR*CRWAGW
Trigger: CCAGCCTGCCCACCTACAGCACCGGAGGTGCCGAGC...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCCGCTCTCGCTGCCAGTaGCGCTGCCGCTCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPRSRCQ*RCRSSY
Trigger: ATACGAGGAGCGGCAGCGGCACTGGCAGCGAGAGCG...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGACCGCTGTGCCCGCTGTaGCTGGGCCGCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRPLCPL*LGRTVL
Trigger: GAGGACTGTGCGGCCCAGGCACAGCGGGCACAGCGG...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTTGTGCGAAGTCGTCCTaGAATTGCCGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSCAKSS*NCRFSC
Trigger: GCAGGAGAAGCGGCAATTGCAGGACGACTTCGCACA...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAACCCAACCCCGGCTGCTaGCCGCTGCACTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQPNPGC*PLHFGL
Trigger: GAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGG...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCCCCCAACCCCGGCTaGTGCCCGCTGCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRAPNPG*CPLHFG
Trigger: GCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGGGGC...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTCTCCAGGAGAGAGGCTaGAGAGCTCAAACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSLQERG*RAQTWE
Trigger: TTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAG...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCCTAGGGGGCACAGCTaGGCACAGCGGCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAPRGHS*AQRLLC
Trigger: GCACAGGAGCCGCTGTGCCCAGCTGTGCCCCCTAGG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCGATGAGCTTTGGTGGTaGGCCGCGGAGGTGGGCATT +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSADELWW*AAEVGI
Trigger: AATGCCCACCTCCGCGGCCCACCACCAAAGCTCATC...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCGGCCACTGTCTGAGTaGGAGGGCCCAGTAGGGACC +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGRPLSE*EGPVGT
Trigger: GGTCCCTACTGGGCCCTCCCACTCAGACAGTGGCCG...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTCAGCGGTGGCAGGTaGCACAGGGGGCTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTVSGGR*HRGLPE
Trigger: CTCCGGGAGCCCCCTGTGCCACCTGCCACCGCTGAC...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAACGCAATCGCTCCACCTaGGCCCGCAAGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQRNRST*ARKLPP
Trigger: TGGGGGCAGCTTGCGGGCCCAGGTGGAGCGATTGCG...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCGGAGACAAGTGGCTTTaGGGCCCTCAGCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSAGDKWL*GPQPLG
Trigger: CCCCAAAGGCTGAGGGCCCCAAAGCCACTTGTCTCC...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCCCCTGCTCCCCTGGCTaGAGTGGGCTGGAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRAPCSPG*SGLEAP
Trigger: AGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTAGCGGGGCCAAGAAGTaGACAGAGAATTGCACTGGG +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSSGAKK*TENCTG
Trigger: CCCAGTGCAATTCTCTGTCCACTTCTTGGCCCCGCT...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCTGCCTCCCAGAGGTaGATGCAGGCTCATACCAGT +
Preference number: 4 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRPASQR*MQAHTS
Trigger: ACTGGTATGAGCCTGCATCCACCTCTGGGAGGCAGG...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCGGGCAGGCTGGACAGTaGGTTTCGGCCAGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPGQAGQ*VSARVG
Trigger: TCCGACTCTGGCCGAAACTCACTGTCCAGCCTGCCC...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGAGGCGGGGGTGGTGGTaGGCGCTCCCCACAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AVGNEVGSNKSLWVTVNTRRGWW*ALPTGA
Trigger: AGCTCCTGTGGGGAGCGCTCACCACCACCCCCGCCT...CGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTTGTGGATCTAACAAGTaGATTTGTGGTGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RAQARPCPPMWAGTSGAACGSNK*ICGVWE
Trigger: CTCCCACACACCACAAATTCACTTGTTAGATCCACA...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCCTTCAAGTGCTGGAATaGATCTCAATTCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRREAAELKPGNRAQARPLQVLE*ISIPPG
Trigger: CCCAGGGGGAATTGAGATTCATTCCAGCACTTGAAG...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCGTAGCAGGCCATCCTaGTGGCGGAAGAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGRSRPS*WRKKVG
Trigger: GCCCACCTTCTTCCGCCAGCAGGATGGCCTGCTACG...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGGGCCCCCAAACAGCTaGGTCAGGCTGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTGPPNS*VRLPWL
Trigger: GAGCCAGGGCAGCCTGACGCAGCTGTTTGGGGGCCC...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGACCATGGGAAGGCAGGTaGCCGCCTGGGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRPWEGR*PPGELV
Trigger: CACCAGCTCCCCAGGCGGGCACCTGCCTTCCCATGG...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGACGCTGCCAGTGCCGCTaGCGCTCCTCGTATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRRCQCR*RSSYAW
Trigger: CCAGGCATACGAGGAGCGGCAGCGGCACTGGCAGCG...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGAATTGCCGCTTCTCCTaGTGCAGCTGGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRNCRFS*CSWNTC
Trigger: GCAGGTGTTCCAGCTGCAGCAGGAGAAGCGGCAATT...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTCTTCTGCACCAGCTCTaGCTGAGACTCTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSLLHQL*LRLFQL
Trigger: CAGCTGAAAGAGTCTCAGGCAGAGCTGGTGCAGAAG...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCCGACGCCCTGTGACTaGGTGTCTGGGGGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAPTPCD*VSGGSV
Trigger: AACCGAGCCCCCAGACACGCAGTCACAGGGCGTCGG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTGACTCCCCCTTCAAGTaGTGGAATGAATCTCAATTC +
Preference number: 4 (lower is better)
Translates to: RAQARPCPPMWAGTSGAADSPFK*WNESQF
Trigger: GAATTGAGATTCATTCCAGCACTTGAAGGGGGAGTC...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCGCACAATGGCCATGGTaGCAGAGGCTCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGAQWPW*QRLRPG
Trigger: GCCAGGCCTGAGCCTCTGCCACCATGGCCATTGTGC...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAAGGGATGAGCTTTGGTaGTGGGCCGCGGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQRDELW*WAAEVG
Trigger: GCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCT...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTTGGGGAGCTGGTGGTTaGCTCGGCACCTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAWGAGG*LGTSGA
Trigger: AGCACCGGAGGTGCCGAGCCAACCACCAGCTCCCCA...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTGGGGAGCTGGTGGTTaGCTCGGCACCTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSWGAGG*LGTSGA
Trigger: AGCACCGGAGGTGCCGAGCCAACCACCAGCTCCCCA...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGCCCGCCTGGGGAGCTaGTGGTTGGCTCGGCACCTC +
Preference number: 4 (lower is better)
Translates to: AVGNEVGSNKSLWVTVNTARLGS*WLARHL
Trigger: GAGGTGCCGAGCCAACCACCAGCTCCCCAGGCGGGC...CGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGACCTCGCCCAGAGCCATaGGAAGGCAGGTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRPRPEP*EGRCPP
Trigger: AGGCGGGCACCTGCCTTCCCATGGCTCTGGGCGAGG...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGATCTCGCCTGATTTCTaGCACACCTCCCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGISPDF*HTSHLV
Trigger: GACCAAGTGGGAGGTGTGCCAGAAATCAGGCGAGAT...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCAGCTGCTCAGCTTCCTaGCGGTGTCGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPSCSAS*RCRCSS
Trigger: GGAGCTGCAGCGACACCGCCAGGAAGCTGAGCAGCT...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGAGAAGCCCAGAGGCCTaGATCCTAGGAGACAAGTGG +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWRSPEA*ILGDKW
Trigger: CCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCT...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCGGGGCCAGCGGCAGCTaGTCATTGTTCCAGCACAAA +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSAGASGS*SLFQHK
Trigger: TTTGTGCTGGAACAATGACCAGCTGCCGCTGGCCCC...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGGGAGAGACGGTGCCTaGACAGACTTGTCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGGRDGA*TDLSVS
Trigger: ACTTACTGACAAGTCTGTCCAGGCACCGTCTCTCCC...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp TCTTCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGAATCTCAATTCCCCCTaGGCCCCAAACCACACTGCC +
Preference number: 4 (lower is better)
Translates to: SSLLPWLEWAGSACEQGWNLNSP*APNHTA
Trigger: GGCAGTGTGGTTTGGGGCCCAGGGGGAATTGAGATT...CCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAGGGACAGGGCCGGCCTaGGATAAGGCTGCTCACACT +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQGTGPA*DKAAHT
Trigger: AGTGTGAGCAGCCTTATCTCAGGCCGGCCCTGTCCC...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGTGGAGGCTCCATTTTaGGAAATGCGTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSVEAPF*EMRLWL
Trigger: CAGCCACAAACGCATTTCTCAAAATGGAGCCTCCAC...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTGAGGTGGGCATTGTGTaGCCGCTGCTCTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAEVGIV*PLLSGI
Trigger: GATGCCCGAGAGCAGCGGGCACACAATGCCCACCTC...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCCCCCTAGGGAGCCTGTaGTCTTGCTGGAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRAPLGSL*SCWRRT
Trigger: GGTCCTCCTCCAGCAAGAGCACAGGCTCCCTAGGGG...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCAGCTGCTGAAGCTCTaGCTCCCGGTCTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGQLLKL*LPVSEL
Trigger: AAGCTCCGAGACCGGGAGGCAGAGCTTCAGCAGCTG...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCTCCTGGCGGTGTCGCTaGAGCTCCTGGGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRASWRCR*SSWEQA
Trigger: AGCCTGTTCCCAGGAGCTGCAGCGACACCGCCAGGA...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGTCAAAGCTGTCCCGCTaGTCCTCACCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AVGNEVGSNKSLWVTVNTSKLSR*SSPRRR
Trigger: GCGGCGGCGGGGTGAGGAGCAGCGGGACAGCTTTGA...CGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTCAGATGCAGGGGGCCTaGTCGGCCAGGCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSQMQGA*SARPRS
Trigger: TGACCTGGGCCTGGCCGAGCAGGCCCCCTGCATCTG...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTTGGATCTGCAGCTGCTaGCCCTCTGGCAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAWICSC*PSGRAP
Trigger: GGGAGCTCTGCCAGAGGGGCAGCAGCTGCAGATCCA...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCGGGCCTAAGTGGATCTaGAGCTGCTGCCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSGPKWI*SCCPSG
Trigger: GCCAGAGGGGCAGCAGCTGCAGATCCACTTAGGCCC...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCCCTTCTTTCTCGCATaGCCTCCATTAAATCCACCG +
Preference number: 4 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGPFFLA*PPLNPP
Trigger: CGGTGGATTTAATGGAGGGCATGCGAGAAAGAAGGG...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCAGGAGCAGGCTCCAGTaGCACTGGCAGAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPRSRLQ*HWQSLH
Trigger: GTGCAGACTCTGCCAGTGCCACTGGAGCCTGCTCCT...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAAGGGATGAGCTTTGGTaGTGGGCCGCGGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTRDELW*WAAEVG
Trigger: GCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCT...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAACTCTGCCAGGAGGAATaGGTCAGCGGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQLCQEE*VSGGRW
Trigger: CCACCTGCCACCGCTGACCCATTCCTCCTGGCAGAG...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAGCTGCTGCCCCTCTaGCAGAGCTCCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAQLLPL*QSSLQS
Trigger: GCTCTGTAGGGAGCTCTGCCAGAGGGGCAGCAGCTG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCCAGCTGCTGCCCCTCTaGCAGAGCTCCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRAQLLPL*QSSLQS
Trigger: GCTCTGTAGGGAGCTCTGCCAGAGGGGCAGCAGCTG...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCGGAGACAAGTGGCTTTaGGGCCCTCAGCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPGDKWL*GPQPLG
Trigger: CCCCAAAGGCTGAGGGCCCCAAAGCCACTTGTCTCC...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCGGTTGGCAGTGGCACTaGCAGCGGTGGGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPGWQWH*QRWGMK
Trigger: CTTCATTCCCCACCGCTGCCAGTGCCACTGCCAACC...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCGAACAGGGTTGGCAGTaGCACTGGCAGCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSEQGWQ*HWQRWG
Trigger: TCCCCACCGCTGCCAGTGCCACTGCCAACCCTGTTC...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAACCCTGTCCCCCAATGTaGGCAGGCACATCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQPCPPM*AGTSGA
Trigger: TGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGG...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CGAGCCCAGGCCCGGCCCTGTCCCCCAATGTGGGCAGGCACATCCGGAGCAGCTAAGGGAGAGGCTGCTTaGTCACAAACACAAATAAAC +
Preference number: 4 (lower is better)
Translates to: RAQARPCPPMWAGTSGAAKGEAA*SQTQIN
Trigger: GTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTT...AGCTGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGGCCGGGCCTGGGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTGGGGGCCAAGGGGGCTaGCACCTCTGTTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAGGQGG*HLCCIS
Trigger: GGAAATGCAACAGAGGTGCCAGCCCCCTTGGCCCCC...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCGAGGCATGGGAGGCCTaGATGATTACCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGEAWEA*MITAGP
Trigger: TGGCCCTGCGGTAATCATCCAGGCCTCCCATGCCTC...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTTCCAGAGACAGGGATaGGCTTTGGTGGTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSFQRQG*ALVVGR
Trigger: GCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAA...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCCCTTCTCTACCAGCTTaGAGCACAGGTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPPSLPA*STGPWS
Trigger: GGACCAGGGACCTGTGCTTCAAGCTGGTAGAGAAGG...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAGCTGCTGAAGCTCTaGCTCCCGGTCTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAQLLKL*LPVSEL
Trigger: AAGCTCCGAGACCGGGAGGCAGAGCTTCAGCAGCTG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGATGGAACACCTGCAGCTaGAGCAGCTGTTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRWNTCS*SSCWAR
Trigger: GCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTTCCA...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGGCCCGAGCTCCCGCTaGTCCCGCTCCAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQGPSSR*SRSKVA
Trigger: CGCCACCTTGGAGCGGGAGCAGCGGGAGCTCGGGCC...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGCCCAACCCCGGCTGCTaGCCGCTGCACTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: DISEFFLWSDFSPLTPGEPNPGC*PLHFGL
Trigger: GAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGG...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATTCAAAGCTGTCCCGCTaGTCCTCACCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHSKLSR*SSPRRR
Trigger: GCGGCGGCGGGGTGAGGAGCAGCGGGACAGCTTTGA...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCGCTCTAGCTGCCGGTTaGGCCGGTACATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPALAAG*AGTSGC
Trigger: ACATCCAGATGTACCGGCGCAACCGGCAGCTAGAGC...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTTCCAGGCTGAGCTGCTaGAGCTCCTGCTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRASRLSC*SSCSSC
Trigger: GCAGCTAGAGCAGGAGCTGCAGCAGCTCAGCCTGGA...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCATCCGGAGCAGCTGGTaGCATCTGGCTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPIRSSW*HLAFSG
Trigger: GCCAGAGAAAGCCAGATGGCACCAGCTGCTCCGGAT...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAACTTCCTGGAAGCAGCTaGAAGCCTCCACCCGGAACC +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQLPGSS*KPPPGT
Trigger: GGTTCCGGGTGGAGGCTTGCAGCTGCTTCCAGGAAG...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGACTAGGTTCCGAACTCTaGGCTCCCGGCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRLGSEL*APGSQL
Trigger: GAGCTGGGAGCCGGGAGCCCAGAGTTCGGAACCTAG...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370223.7
CDS-3UTR CCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCATCACTGCTTGGGCTaGGGGGTGACTCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAHHCLG*GVTLSG
Trigger: TCCGGACAGAGTCACCCCCCAGCCCAAGCAGTGATG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCAGCCTGTGCTCTTGCTaGAGGAGGACCGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRASLCSC*RRTGHC
Trigger: ACAGTGGCCGGTCCTCCTCCAGCAAGAGCACAGGCT...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGTCAGCGGTGGCAGGTaGCACAGGGGGCTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGVSGGR*HRGLPE
Trigger: CTCCGGGAGCCCCCTGTGCCACCTGCCACCGCTGAC...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAGCCACCCTGAGTTCTTaGCAGAAGCCCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQATLSS*QKPRGL
Trigger: CAGGCCTCTGGGCTTCTGCCAAGAACTCAGGGTGGC...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCCTCAGCCGTGTGGAGTGAACAGTaGGGAAGGGACTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: QKPRGLDPRRQVALGPSAVWSEQ*GRDFLG
Trigger: CCCTAAGAAGTCCCTTCCCCACTGTTCACTCCACAC...GGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAGGCTCTGCTCCTTCCTaGAAGCAGCTGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQGSAPS*KQLQAS
Trigger: GGAGGCTTGCAGCTGCTTCCAGGAAGGAGCAGAGCC...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCGTTCTTCCTTTGGTCTaGCTTCAGCCCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGVLPLV*LQPPHS
Trigger: GGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAAC...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTTCTAACTCCTTTGCCTaGTCTGTTCCCCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSSNSFA*SVPLLS
Trigger: AGAAAGAAGGGGAACAGATCAGGCAAAGGAGTTAGA...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCTGCCCAATGCTGGTCTaGACAGGGCTGAGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGCPMLV*TGLRSE
Trigger: TTCACTCCTCAGCCCTGTTCAGACCAGCATTGGGCA...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGCGTAGCAGGCCATCCTaGTGGCGGAAGAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AVGNEVGSNKSLWVTVNTRSRPS*WRKKVG
Trigger: GCCCACCTTCTTCCGCCAGCAGGATGGCCTGCTACG...CGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTGAGGTGGGCATTGTGTaGCCGCTGCTCTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSEVGIV*PLLSGI
Trigger: GATGCCCGAGAGCAGCGGGCACACAATGCCCACCTC...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCCTTCCAGGACACAGTaGAGCAGGGCCTCATCCGAA +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAPSRTQ*SRASSE
Trigger: TTCGGATGAGGCCCTGCTGCACTGTGTCCTGGAAGG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAACCTTCCAGGACACAGTaGAGCAGGGCCTCATCCGAA +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQPSRTQ*SRASSE
Trigger: TTCGGATGAGGCCCTGCTGCACTGTGTCCTGGAAGG...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCGGCCTCATCACTCTCTaGCAGGAGGAATGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRAGLITL*QEEWVS
Trigger: GCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCC...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAAGCTCCAGGCTGAGCTaGTGCAGCTCCTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTSSRLS*CSSCSS
Trigger: GCTAGAGCAGGAGCTGCAGCAGCTCAGCCTGGAGCT...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCCTCCAGGAGAGAGGCTaGAGAGCTCAAACCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPLQERG*RAQTWE
Trigger: TTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAG...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCGTGTGGGAGAGACGGTaGCTGGACAGACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPVWERR*LDRLVS
Trigger: ACTGACAAGTCTGTCCAGGCACCGTCTCTCCCACAC...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTGCACAATGGCCATGGTaGCAGAGGCTCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSAQWPW*QRLRPG
Trigger: GCCAGGCCTGAGCCTCTGCCACCATGGCCATTGTGC...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAAGGAGCAGGCTCCAGTaGCACTGGCAGAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTRSRLQ*HWQSLH
Trigger: GTGCAGACTCTGCCAGTGCCACTGGAGCCTGCTCCT...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAAGGTTTGGGCAGCACTaGCTTGAAGGCTGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQRFGQH*LEGCWA
Trigger: CGCCCAACAGCCTTCAAGCCAGTGCTGCCCAAACCT...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGCGGCCACTGTCTGAGTaGGAGGGCCCAGTAGGGACC +
Preference number: 4 (lower is better)
Translates to: DISEFFLWSDFSPLTPGERPLSE*EGPVGT
Trigger: GGTCCCTACTGGGCCCTCCCACTCAGACAGTGGCCG...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATGGAATGGGTCAGCGGTaGCAGGTGGCACAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHGMGQR*QVAQGA
Trigger: AGCCCCCTGTGCCACCTGCCACCGCTGACCCATTCC...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCCTGCCCGCTGCACTTTaGCCTCATCACTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRALPAAL*PHHSLP
Trigger: TGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAG...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCAGCTCCCTACAGAGCTaGTTGCTGAGGGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPSSLQS*LLRALD
Trigger: ATCTAGGGCCCTCAGCAACCAGCTCTGTAGGGAGCT...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGGTTGGCAGTGGCACTaGCAGCGGTGGGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRGWQWH*QRWGMK
Trigger: CTTCATTCCCCACCGCTGCCAGTGCCACTGCCAACC...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTTCTTCCCTGCTCCCCTaGCTGGAGTGGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSSSLLP*LEWAGS
Trigger: GCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGAAGA...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCGTCCTCTCAGCCAGGTaGCCTCATTACAGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPVLSAR*PHYRAV
Trigger: AACTGCCCTGTAATGAGGCCACCTGGCTGAGAGGAC...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTCATAGGGCCACCCTaGGTTCTTGGCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTVIGPP*VLGRSP
Trigger: TGGGCTTCTGCCAAGAACTCAGGGTGGCCCTATGAC...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTGTTCTTCCTTTGGTCTaGCTTCAGCCCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAVLPLV*LQPPHS
Trigger: GGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAAC...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGAAGCCAGGAGCCCCTaGCCCATTCTCCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AVGNEVGSNKSLWVTVNTEARSP*PILQSP
Trigger: TGGACTCTGGAGAATGGGTCAGGGGCTCCTGGCTTC...CGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGGCCGGAGACGGATCTaGAGAGTTGGGGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRGRRRI*RVGESL
Trigger: GAGACTTTCCCCAACTCTTCAGATCCGTCTCCGGCC...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGTGGGCACGCAGGTATaGGAGTGGTGGGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGVGTQV*EWWEPG
Trigger: CCCAGGCTCCCACCACTCTCATACCTGCGTGCCCAC...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTAATTGCCGCTTCTCCTaGTGCAGCTGGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRANCRFS*CSWNTC
Trigger: GCAGGTGTTCCAGCTGCAGCAGGAGAAGCGGCAATT...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATGGGCCTAAGTGGATCTaGAGCTGCTGCCCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHGPKWI*SCCPSG
Trigger: GCCAGAGGGGCAGCAGCTGCAGATCCACTTAGGCCC...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAGAGGTACCTCAGGGGTaGAATCAGCACCTCAGATGG +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQEVPQG*NQHLRW
Trigger: CCATCTGAGGTGCTGATTGCACCCCTGAGGTACCTC...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGCTGGCGGAAGAAGGTaGGCCCAGGAGGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQAGGRR*AQEGRG
Trigger: ACCACGGCCCTCCTGGGCCCACCTTCTTCCGCCAGC...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGGACAGGGATGAGCTTTaGTGGTGGGCCGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: DISEFFLWSDFSPLTPGEDRDEL*WWAAEV
Trigger: CACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTC...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCCGCTCCTCGTATGCCTaGCACATGGTAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRARSSYA*HMVASF
Trigger: GAATGAGGCTACCATGTGCCAGGCATACGAGGAGCG...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGTGTGCCCGCTGTGCCTaGGCCGCACAGTCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQCARCA*AAQSSR
Trigger: GCGAGAGGACTGTGCGGCCCAGGCACAGCGGGCACA...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTAGCTCCCTACAGAGCTaGTTGCTGAGGGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRASSLQS*LLRALD
Trigger: ATCTAGGGCCCTCAGCAACCAGCTCTGTAGGGAGCT...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGCTTTGGGGCCATCCGTaGACCCTGGGGCCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: DISEFFLWSDFSPLTPGELWGHP*TLGPKW
Trigger: CCACTTAGGCCCCAGGGTCCACGGATGGCCCCAAAG...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCATCCTAGGAGACAAGTaGCTTTGGGGCCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSILGDK*LWGPQP
Trigger: AGGCTGAGGGCCCCAAAGCCACTTGTCTCCTAGGAT...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCTGGCACTGGCAGCGGTaGGGAATGAAGTGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRAWHWQR*GMKWVV
Trigger: TACTACCCACTTCATTCCCCACCGCTGCCAGTGCCA...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGCCCTGCTCCCCTGGCTaGAGTGGGCTGGAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQPCSPG*SGLEAP
Trigger: AGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCCATTACAGGGCAGTTTaGGCAGAGGTACCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRAHYRAV*AEVPQG
Trigger: CCCCTGAGGTACCTCTGCCCAAACTGCCCTGTAATG...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGACATGGGAGGCCTGGATaGTTACCGCAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGHGRPG*LPQGHL
Trigger: CAGGTGGCCCTGCGGTAATCATCCAGGCCTCCCATG...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGACCCCTAGGGAGCCTGTaGTCTTGCTGGAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGPLGSL*SCWRRT
Trigger: GGTCCTCCTCCAGCAAGAGCACAGGCTCCCTAGGGG...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGATGGAACACCTGCAGCTaGAGCAGCTGTTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGWNTCS*SSCWAR
Trigger: GCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTTCCA...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCTTCTGCACCAGCTCTaGCTGAGACTCTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRALLHQL*LRLFQL
Trigger: CAGCTGAAAGAGTCTCAGGCAGAGCTGGTGCAGAAG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGACCGGCTGCTGCCCGCTaGACTTTGGCCTCATCACTC +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGPAAAR*TLASSL
Trigger: GAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGG...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCTGCTGAAGTCATCATaGAGAGCGGGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRALLKSS*RAGPRS
Trigger: ACTTCTTGGCCCCGCTCTGCATGATGACTTCAGCAG...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGACAGGGATGAGCTTTaGTGGTGGGCCGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGDRDEL*WWAAEV
Trigger: CACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTC...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAATCTCGCCTGATTTCTaGCACACCTCCCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQISPDF*HTSHLV
Trigger: GACCAAGTGGGAGGTGTGCCAGAAATCAGGCGAGAT...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAAGAAGCCCAGAGGCCTaGATCCTAGGAGACAAGTGG +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTRSPEA*ILGDKW
Trigger: CCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCT...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATGCCACCCTGAGTTCTTaGCAGAAGCCCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHATLSS*QKPRGL
Trigger: CAGGCCTCTGGGCTTCTGCCAAGAACTCAGGGTGGC...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCGGTGGGGAATGAAGTaGGTAGTAACAAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGRWGMK*VVTRAS
Trigger: AGAGGCTCTTGTTACTACCCACTTCATTCCCCACCG...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGACTCCCCTGGCTGGAGTaGGCTGGAAGCGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGLPWLE*AGSACE
Trigger: TTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAG...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGACCCTGTCCCCCAATGTaGGCAGGCACATCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGPCPPM*AGTSGA
Trigger: TGCTCCGGATGTGCCTGCCCACATTGGGGGACAGGG...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCTCTGAGTTCTTCCTTTaGTCTGACTTCAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPSEFFL*SDFSPL
Trigger: GAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGA...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGTGTGGCTGTGGGAGATaGGAACCCCTCATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AVGNEVGSNKSLWVTVNTCGCGR*EPLILP
Trigger: GGGGAGAATGAGGGGTTCCCATCTCCCACAGCCACA...CGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGATGGTGGGAGCCTGGGTaGCTTGAGGGCCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGWWEPG*LEGPLV
Trigger: CACCAATGGGCCCTCAAGCCACCCAGGCTCCCACCA...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGTGCTCACACTACCCATaGCTGGAGCTTGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DISEFFLWSDFSPLTPGECSHYP*LELVGQ
Trigger: CTGCCCCACAAGCTCCAGTCATGGGTAGTGTGAGCA...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATGGCCATAAACCTGGGTaGAGGGAGAGGCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHGHKPG*RERLLG
Trigger: ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCC...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGTGCAGTGGAGCCTGTaGACGTGGGCACGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGVQWSL*TWARRY
Trigger: ATACCTGCGTGCCCACGTTCACAGGCTCCACTGCAC...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAACTCAGCAGAGATGCTaGGAGGCATGGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGTQQRC*EAWEAW
Trigger: CCAGGCCTCCCATGCCTCTCAGCATCTCTGCTGAGT...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATGCATTGTGTGCCCGCTaGTCTCGGGCATCCTCAACA +
Preference number: 4 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHALCAR*SRASST
Trigger: TGTTGAGGATGCCCGAGAGCAGCGGGCACACAATGC...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CAGTGTGAAAAATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGACCGCTGTGCCCGCTGTaGCTGGGCCGCACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QCEKYTSENEAINLGEGRPLCPL*LGRTVL
Trigger: GAGGACTGTGCGGCCCAGGCACAGCGGGCACAGCGG...TCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTTTTCACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGAAGTCGTCCTGCAATTaGCGCTTCTCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AVGNEVGSNKSLWVTVNTKSSCN*RFSCCS
Trigger: GCTGCAGCAGGAGAAGCGGCAATTGCAGGACGACTT...CGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCAAGTGGACAGAGAATTaGACTGGGAGTAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGKWTEN*TGSRSV
Trigger: CACACTCCTACTCCCAGTGCAATTCTCTGTCCACTT...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTTCACCTCTGGAGGCTaGTCCAAAACCTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSFTSGG*SKTSLP
Trigger: TGGAAGTGAGGTTTTGGAGCAGCCTCCAGAGGTGAA...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGAAAGGCGGCTAAACTaGCTCTCTGTCGATCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRERRLN*LSVDLA
Trigger: AGCCAGATCGACAGAGAGGCAGTTTAGCCGCCTTTC...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATCTGCCCGCTGCACTTTaGCCTCATCACTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHLPAAL*PHHSLP
Trigger: TGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAG...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCAGTAACAAGAGCCTCTaGGTAACAGTGAACACGGGG +
Preference number: 4 (lower is better)
Translates to: VNTGTFERSDLAPPSHRASNKSL*VTVNTG
Trigger: CCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACT...GGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTTCTGAGTTCTTCCTTTaGTCTGACTTCAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSFGLTSAPSLQERGCRASEFFL*SDFSPL
Trigger: GAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGA...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAGCCTCTCTGTCGATCTaGCTAAATAAGAAACCCGCG +
Preference number: 4 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQASLSI*LNKKPA
Trigger: CGCGGGTTTCTTATTTAGCCAGATCGACAGAGAGGC...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGGCCATAAACCTGGGTaGAGGGAGAGGCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGGHKPG*RERLLG
Trigger: ACCAAGCAGCCTCTCCCTTCACCCAGGTTTATGGCC...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR TCA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTGACTTAGGCATCTGCTaGAGTCATCATGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSDLGIC*SHHAER
Trigger: CCGCTCTGCATGATGACTTCAGCAGATGCCTAAGTC...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAAACAGGGCTGAGGAGTaGATTCACTCAGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTNRAEE*IHSAEM
Trigger: CATCTCTGCTGAGTGAATTCACTCCTCAGCCCTGTT...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAAGTCGTCCTGCAATTaGCGCTTCTCCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DISEFFLWSDFSPLTPGEKSSCN*RFSCCS
Trigger: GCTGCAGCAGGAGAAGCGGCAATTGCAGGACGACTT...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTAAGCGGGGTCAAGTCTaGGATCACGAGTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSKRGQV*DHEFPF
Trigger: GAATGGGAACTCGTGATCGCAGACTTGACCCCGCTT...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTATGCGTTTGTGGCTGTaGGAGATGGGAACCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSMRLWL*EMGTPH
Trigger: ATGAGGGGTTCCCATCTCCCACAGCCACAAACGCAT...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTTCTCTCTTCGGCGTGTaGGGAGAGGTGGGACATTAT +
Preference number: 4 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSSLFGV*GEVGHY
Trigger: ATAATGTCCCACCTCTCCCCACACGCCGAAGAGAGA...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACACGAGCACGGAGAAAGTaGAAATTGAAGGAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTRARRK*KLKEGD
Trigger: GTCTCCTTCCTTCAATTTTCACTTTCTCCGTGCTCG...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGTGGTCTGAACAGGGCTaGGGAGTGAATTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: DISEFFLWSDFSPLTPGEWSEQG*GVNSLS
Trigger: GCTGAGTGAATTCACTCCTCAGCCCTGTTCAGACCA...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGGTGAAGGGAGAGGCTaGTTGGTCACAAACACAAAT +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTGEGRG*LVTNTN
Trigger: ATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACC...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATTGGCTTGAAGGCTGTTaGGCGGATCAGGATCTTCTC +
Preference number: 4 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHWLEGC*ADQDLL
Trigger: GAGAAGATCCTGATCCGCCCAACAGCCTTCAAGCCA...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGACGCTCCTCGTATGCCTaGCACATGGTAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGRSSYA*HMVASF
Trigger: GAATGAGGCTACCATGTGCCAGGCATACGAGGAGCG...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGAGTAACAAGAGCCTCTaGGTAACAGTGAACACGGGG +
Preference number: 4 (lower is better)
Translates to: AVGNEVGSNKSLWVTVNTSNKSL*VTVNTG
Trigger: CCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACT...CGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGATGGCACTGGCAGCGGTaGGGAATGAAGTGGGTAGTA +
Preference number: 4 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGWHWQR*GMKWVV
Trigger: TACTACCCACTTCATTCCCCACCGCTGCCAGTGCCA...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp ACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATAGGGCCACCCAAGGGAGAGGCTGCTTaGTCACAAACACAAATAAAC +
Preference number: 4 (lower is better)
Translates to: TRGPLSGLILLLQVIGPPKGEAA*SQTQIN
Trigger: GTTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTT...GGGTGGCCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CCA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATACGGATCTGAAGAGTTaGGGAAAGTCTCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHTDLKS*GKSPSH
Trigger: GTGGGAGGGAGACTTTCCCCAACTCTTCAGATCCGT...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp AGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAAGAAGGAGGGGCAAGTaGAGGCTCCATTTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: SSSFGLTSAPSLQERGCRRRRGK*RLHFEK
Trigger: TTTCTCAAAATGGAGCCTCCACTTGCCCCTCCTTCT...TCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp GCACTGGCAGCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACATCCCCCTTCAAGTGCTaGAATGAATCTCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: ALAAVGNEVGSNKSLWVTSPFKC*NESQFP
Trigger: GGGGAATTGAGATTCATTCCAGCACTTGAAGGGGGA...TGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGCTGCCAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR TCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGCACTGCCAACCTCTCTaGAACCCTACAGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: DISEFFLWSDFSPLTPGEHCQPL*NPTASE
Trigger: TTCTGAAGCTGTAGGGTTTCAGAGAGGTTGGCAGTG...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp GACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGCGGTGGGGAATGAAGTaGGTAGTAACAAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DISEFFLWSDFSPLTPGERWGMK*VVTRAS
Trigger: AGAGGCTCTTGTTACTACCCACTTCATTCCCCACCG...CTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTCTCCATTTTGAGAAATaGGTTTGTGGCTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSLHFEK*VCGCGR
Trigger: TCTCCCACAGCCACAAACGCATTTCTCAAAATGGAG...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR GCA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGGTGAAGGGAGAGGCTaGTTGGTCACAAACACAAAT +
Preference number: 4 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQGEGRG*LVTNTN
Trigger: ATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTCACC...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CAGTGTGAAAAATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGACCTCCCAGAGGTGGATaGAGGCTCATACCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: QCEKYTSENEAINLGEGRPPRGG*RLIPVS
Trigger: GGAAACTGGTATGAGCCTGCATCCACCTCTGGGAGG...TCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTTTTCACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CCA 90 bp CAGTGTGAAAAATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGATGGCTTGAAGGCTGTTaGGCGGATCAGGATCTTCTC +
Preference number: 4 (lower is better)
Translates to: QCEKYTSENEAINLGEGRWLEGC*ADQDLL
Trigger: GAGAAGATCCTGATCCGCCCAACAGCCTTCAAGCCA...TCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTTTTCACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR GCA 90 bp CAGTGTGAAAAATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGACAAGTCAAAAGACACTaGGAACCAGGAAGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: QCEKYTSENEAINLGEGRQVKRH*EPGRGV
Trigger: GACACCTCTTCCTGGTTCGCAGTGTCTTTTGACTTG...TCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTTTTCACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS TCA 90 bp AGGGGCTGCTCGGCGGCAGTCGGGAGCCCTCCCTCCGACGCCCTGTaGCTGCGTGTCTGGGGGCTCGGTTCGGCTCGACGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: RGCSAAVGSPPSDAL*LRVWGLGSARRGGG
Trigger: GCCGCCGCCGCGTCGAGCCGAACCGAGCCCCCAGACACGCAGTCACAGGGCGTCGGAGGGAGGGCTCCCGACTGCCGCCGAGCAGCCCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 90 bp GCTGCTCGGCGGCAGTCGGGAGCCCTCCCTCCGACGCCCTGTGACTaGGTGTCTGGGGGCTCGGTTCGGCTCGACGCGGCGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: AARRQSGALPPTPCD*VSGGSVRLDAAAAV
Trigger: CACCGCCGCCGCCGCGTCGAGCCGAACCGAGCCCCCAGACACGCAGTCACAGGGCGTCGGAGGGAGGGCTCCCGACTGCCGCCGAGCAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 90 bp CACACCTCCCACTTGGTCTCCTCAAGCCTCGGCCCGAGCTCCCGCTaGTCCCGCTCCAAGGTGGCGCAGCGCCGCTCCAGCTGTTCGCGC +
Preference number: 5 (lower is better)
Translates to: HTSHLVSSSLGPSSR*SRSKVAQRRSSCSR
Trigger: GCGCGAACAGCTGGAGCGGCGCTGCGCCACCTTGGAGCGGGAGCAGCGGGAGCTCGGGCCGAGGCTTGAGGAGACCAAGTGGGAGGTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 90 bp CCCGCTGCAGCTCCACCCGCAATCGCTCCACCTGGGCCCGCAAGCTaGCCCCAACCCCGGCTGCTGCCCGCTGCACTTTGGCCTCATCAC +
Preference number: 5 (lower is better)
Translates to: PAAAPPAIAPPGPAS*PQPRLLPAALWPHH
Trigger: GTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGGGGCAGCTTGCGGGCCCAGGTGGAGCGATTGCGGGTGGAGCTGCAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 90 bp AGGCAGTGCCCCTCGCCCAGAGCCATGGGAAGGCAGGTGCCCGCCTaGGGAGCTGGTGGTTGGCTCGGCACCTCCGGTGCTGTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: RQCPSPRAMGRQVPA*GAGGWLGTSGAVGG
Trigger: CCCACCTACAGCACCGGAGGTGCCGAGCCAACCACCAGCTCCCCAGGCGGGCACCTGCCTTCCCATGGCTCTGGGCGAGGGGCACTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 90 bp ACCTGCAGCTGCAGCAGCTGTTGGGCCCGCTGTGCCCGCTGTGCCTaGGCCGCACAGTCCTCTCGCAGGGCCTCACGCTCTCGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: TCSCSSCWARCARCA*AAQSSRRASRSRCQ
Trigger: CTGGCAGCGAGAGCGTGAGGCCCTGCGAGAGGACTGTGCGGCCCAGGCACAGCGGGCACAGCGGGCCCAACAGCTGCTGCAGCTGCAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 90 bp TCTCCTCAAGCCTCGGCCCGAGCTCCCGCTGCTCCCGCTCCAAGGTaGCGCAGCGCCGCTCCAGCTGTTCGCGCTCCTGCAGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SPQASARAPAAPAPR*RSAAPAVRAPAAAV
Trigger: CACAGCTGCTGCAGGAGCGCGAACAGCTGGAGCGGCGCTGCGCCACCTTGGAGCGGGAGCAGCGGGAGCTCGGGCCGAGGCTTGAGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 90 bp GAGGAGGAGGAGGCAGGGCCCCCAAACAGCTGCGTCAGGCTGCCCTaGCTCCCAGACAGCCCGGTGGCCCGAGGACCCATGAAGCTAGGC +
Preference number: 5 (lower is better)
Translates to: EEEEAGPPNSCVRLP*LPDSPVARGPMKLG
Trigger: GCCTAGCTTCATGGGTCCTCGGGCCACCGGGCTGTCTGGGAGCCAGGGCAGCCTGACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS CCA 90 bp GGGCCCGCAAGCTGCCCCCAACCCCGGCTGCTGCCCGCTGCACTTTaGCCTCATCACTCTCTGCCAGGAGGAATGGGTCAGCGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: GPASCPQPRLLPAAL*PHHSLPGGMGQRWQ
Trigger: CTGCCACCGCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGGGGCAGCTTGCGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCCGCGGAGGTGGGCATaGTGTGCCCGCTGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGPRRWA*CARCSR
Trigger: CCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGG...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGTCCACCGCGCATAAGTaGGGGGCTCCCCAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGSTAHK*GAPQAA
Trigger: GGCGGCCTGGGGAGCCCCCAACTTATGCGCGGTGGA...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 90 bp CCCAACCCCGGCTGCTGCCCGCTGCACTTTGGCCTCATCACTCTCTaGCAGGAGGAATGGGTCAGCGGTGGCAGGTGGCACAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PNPGCCPLHFGLITL*QEEWVSGGRWHRGL
Trigger: GAGCCCCCTGTGCCACCTGCCACCGCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 90 bp TCCACCTGGGCCCGCAAGCTGCCCCCAACCCCGGCTGCTGCCCGCTaGACTTTGGCCTCATCACTCTCTGCCAGGAGGAATGGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: STWARKLPPTPAAAR*TLASSLSARRNGSA
Trigger: CGCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGGGGCAGCTTGCGGGCCCAGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 90 bp GGCCTCATCACTCTCTGCCAGGAGGAATGGGTCAGCGGTGGCAGGTaGCACAGGGGGCTCCCGGAGTCCGGCCGCCTCAGCATCCAACTG +
Preference number: 5 (lower is better)
Translates to: GLITLCQEEWVSGGR*HRGLPESGRLSIQL
Trigger: CAGTTGGATGCTGAGGCGGCCGGACTCCGGGAGCCCCCTGTGCCACCTGCCACCGCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 90 bp GCAGTGGCAGCTTCAGGAGCAGGCTCCAGTGGCACTGGCAGAGTCTaGACAATGGCCATGGTGGCAGAGGCTCAGGCCTGGCCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: AVAASGAGSSGTGRV*TMAMVAEAQAWPAA
Trigger: GGCCGCTGGCCAGGCCTGAGCCTCTGCCACCATGGCCATTGTGCAGACTCTGCCAGTGCCACTGGAGCCTGCTCCTGAAGCTGCCACTGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
ENST00000481129.1
ENST00000489526.1
CDS GCA 90 bp TGGGCCGCACAGTCCTCTCGCAGGGCCTCACGCTCTCGCTGCCAGTaGCGCTGCCGCTCCTCGTATGCCTGGCACATGGTAGCCTCATTC +
Preference number: 5 (lower is better)
Translates to: WAAQSSRRASRSRCQ*RCRSSYAWHMVASF
Trigger: GAATGAGGCTACCATGTGCCAGGCATACGAGGAGCGGCAGCGGCACTGGCAGCGAGAGCGTGAGGCCCTGCGAGAGGACTGTGCGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 90 bp CAATCGCTCCACCTGGGCCCGCAAGCTGCCCCCAACCCCGGCTGCTaGCCGCTGCACTTTGGCCTCATCACTCTCTGCCAGGAGGAATGG +
Preference number: 5 (lower is better)
Translates to: QSLHLGPQAAPNPGC*PLHFGLITLCQEEW
Trigger: CCATTCCTCCTGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGGGGCAGCTTGCGGGCCCAGGTGGAGCGATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 90 bp CCGCAGGGCCACCTGGCAGCAAAGACCCAGGCCCAAGCCCAATCCTaGATCCTCCACAGAGGCCAGGACTCAGGTGAGGGAGGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PQGHLAAKTQAQAQS*ILHRGQDSGEGGAF
Trigger: GAAGGCCCCTCCCTCACCTGAGTCCTGGCCTCTGTGGAGGATGCAGGATTGGGCTTGGGCCTGGGTCTTTGCTGCCAGGTGGCCCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 90 bp GCACTTTGGCCTCATCACTCTCTGCCAGGAGGAATGGGTCAGCGGTaGCAGGTGGCACAGGGGGCTCCCGGAGTCCGGCCGCCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: ALWPHHSLPGGMGQR*QVAQGAPGVRPPQH
Trigger: ATGCTGAGGCGGCCGGACTCCGGGAGCCCCCTGTGCCACCTGCCACCGCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCCAAAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGGGCCGGCTCCCGCTCTaGGAGCCCGAAAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQGRLPL*EPEREG
Trigger: TCCTTCTCTTTCGGGCTCCAAGAGCGGGAGCCGGCC...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp TCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGCCCGGCCCCAGAGTCCCTCCACCTaGAGACCCCTCCTGACCCAC +
Preference number: 5 (lower is better)
Translates to: SRREAAELKPGNRAQARPQSPST*RPLLTH
Trigger: GTGGGTCAGGAGGGGTCTCAAGGTGGAGGGACTCTG...GGGCCGGGCCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGAGCCCCTCGAGGTTaGGGCAGCACTGGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWGAPRG*GSTGLK
Trigger: CTTCAAGCCAGTGCTGCCCAAACCTCGAGGGGCTCC...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGGGAGCCCCTCGAGGTTaGGGCAGCACTGGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQGAPRG*GSTGLK
Trigger: CTTCAAGCCAGTGCTGCCCAAACCTCGAGGGGCTCC...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 90 bp GGTCCTCACCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTGGTaGTGGGCCGCGGAGGTGGGCATTGTGTGCCCGCTGCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: GPHLLQLSRDRDELW*WAAEVGIVCPLLSG
Trigger: GCCCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGTGAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489526.1
CDS CCA 90 bp GCCGGTCCTCACCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTaGTGGTGGGCCGCGGAGGTGGGCATTGTGTGCCCGCTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: AGPHLLQLSRDRDEL*WWAAEVGIVCPLLS
Trigger: CGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGTGAGGACCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489526.1
CDS-3UTR CAA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGACCCATGACTGGAGCTaGTGGGGCAGTGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWTHDWS*WGSGSF
Trigger: GAAGCTGCCACTGCCCCACAAGCTCCAGTCATGGGT...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCCTGGGGAGCTGGTGGTaGGCTCGGCACCTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGLGSWW*ARHLRC
Trigger: GCACCGGAGGTGCCGAGCCAACCACCAGCTCCCCAG...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGAGGAGACAAGTGGCTTaGGGGCCCTCAGCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQRRQVA*GPSAFG
Trigger: CCCAAAGGCTGAGGGCCCCAAAGCCACTTGTCTCCT...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS TCA 90 bp AAGGTGAGTGGTGCAGTGGAGCCTGTGAACGTGGGCACGCAGGTATaGGAGTGGTGGGAGCCTGGGTGGCTTGAGGGCCCATTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: KVSGAVEPVNVGTQV*EWWEPGWLEGPLVG
Trigger: CCCCACCAATGGGCCCTCAAGCCACCCAGGCTCCCACCACTCTCATACCTGCGTGCCCACGTTCACAGGCTCCACTGCACCACTCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 90 bp CCTCACCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTGGTGGTaGGCCGCGGAGGTGGGCATTGTGTGCCCGCTGCTCTCGGGCATC +
Preference number: 5 (lower is better)
Translates to: PHLLQLSRDRDELWW*AAEVGIVCPLLSGI
Trigger: GATGCCCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489526.1
CDS-3UTR CAA 90 bp AGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGGAAGTCGTCCTGCAATaGCCGCTTCTCCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SGLEAPVNRVGSGTGSGGEVVLQ*PLLLLQ
Trigger: CTGCAGCAGGAGAAGCGGCAATTGCAGGACGACTTC...CCCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp GAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGGCACTGGCAGCGGTGGGCCTTCTCTACCAGCTaGAAGCACAGGTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: EWAGSACEQGWQWHWQRWAFSTS*KHRSLV
Trigger: GACCAGGGACCTGTGCTTCAAGCTGGTAGAGAAGGC...CCACCGCTGCCAGTGCCACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS TCA 90 bp GGCCCAAGCCCAATCCTGCATCCTCCACAGAGGCCAGGACTCAGGTaGGGGAGGGGCCTTCTCTACCAGCTTGAAGCACAGGTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: GPSPILHPPQRPGLR*GRGLLYQLEAQVPG
Trigger: ACCAGGGACCTGTGCTTCAAGCTGGTAGAGAAGGCCCCTCCCTCACCTGAGTCCTGGCCTCTGTGGAGGATGCAGGATTGGGCTTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS TCA 90 bp AGGAAGAGCCGGTCCTCACCTTCTCCAGCTTTCCAGAGACAGGGATaGGCTTTGGTGGTGGGCCGCGGAGGTGGGCATTGTGTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: RKSRSSPSPAFQRQG*ALVVGRGGGHCVPA
Trigger: AGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGTGAGGACCGGCTCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489526.1
CDS GCA 90 bp TCCCTCCCACCCAAACTCCAAGGACCAGTCAAGCGGGGTCAAGTCTaGGATCACGAGTTCCCATTCTGCGGCGGGAAGCCAGGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: SLPPKLQGPVKRGQV*DHEFPFCGGKPGAP
Trigger: AGGGGCTCCTGGCTTCCCGCCGCAGAATGGGAACTCGTGATCGCAGACTTGACCCCGCTTGACTGGTCCTTGGAGTTTGGGTGGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 90 bp AGGTATGAGAGTGGTGGGAGCCTGGGTGGCTTGAGGGCCCATTGGTaGGGGGAGCCTGTTTCCTTCTCTCTTCGGCGTGTGGGGAGAGGT +
Preference number: 5 (lower is better)
Translates to: RYESGGSLGGLRAHW*GEPVSFSLRRVGRG
Trigger: ACCTCTCCCCACACGCCGAAGAGAGAAGGAAACAGGCTCCCCCCACCAATGGGCCCTCAAGCCACCCAGGCTCCCACCACTCTCATACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp CCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAACCTGGGAACCGAGCCCAGGTCCCTACAGAGCTGGTaGCTGAGGGCCCTAGATCTC +
Preference number: 5 (lower is better)
Translates to: PLTPGERLQSSNLGTEPRSLQSW*LRALDL
Trigger: GAGATCTAGGGCCCTCAGCAACCAGCTCTGTAGGGA...CCTGGGCTCGGTTCCCAGGTTTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 90 bp AGCTTTCCAGAGACAGGGATGAGCTTTGGTGGTGGGCCGCGGAGGTaGGCATTGTGTGCCCGCTGCTCTCGGGCATCCTCAACATCACTG +
Preference number: 5 (lower is better)
Translates to: SFPETGMSFGGGPRR*ALCARCSRASSTSL
Trigger: CAGTGATGTTGAGGATGCCCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
ENST00000481129.1
ENST00000489526.1
CDS CCA 90 bp ATGCTGAGAGGCATGGGAGGCCTGGATGATTACCGCAGGGCCACCTaGCAGCAAAGACCCAGGCCCAAGCCCAATCCTGCATCCTCCACA +
Preference number: 5 (lower is better)
Translates to: MLRGMGGLDDYRRAT*QQRPRPKPNPASST
Trigger: TGTGGAGGATGCAGGATTGGGCTTGGGCCTGGGTCTTTGCTGCCAGGTGGCCCTGCGGTAATCATCCAGGCCTCCCATGCCTCTCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS TCA 90 bp TGGCACATGGTAGCCTCATTCTCGTCCAGACTGTCCCGCAGCTGCTaGAGCTCTGCCTCCCGGTCTCGGAGCTTTCCTTCCAGGACACAG +
Preference number: 5 (lower is better)
Translates to: WHMVASFSSRLSRSC*SSASRSRSFPSRTQ
Trigger: CTGTGTCCTGGAAGGAAAGCTCCGAGACCGGGAGGCAGAGCTTCAGCAGCTGCGGGACAGTCTGGACGAGAATGAGGCTACCATGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATCCGCGGAGGTGGGCATaGTGTGCCCGCTGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHPRRWA*CARCSR
Trigger: CCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGG...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAATGGCACACCTCCCACTaGGTCTCCTCAAGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQWHTSH*VSSSLG
Trigger: GCCGAGGCTTGAGGAGACCAAGTGGGAGGTGTGCCA...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp TTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTGGCACACCTCCCACTaGGTCTCCTCAAGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: FFLWSDFSPLTPGERLQSWHTSH*VSSSLG
Trigger: GCCGAGGCTTGAGGAGACCAAGTGGGAGGTGTGCCA...GCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp TCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTCAAGCTGCCCGCTGCACTTaGGCCTCATCACTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SFGLTSAPSLQERGCRAQAARCT*ASSLSA
Trigger: GGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGC...TTGAGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp GTTCTTGGCAGAAGCCCAGAGGCCTGGATCCTAGGAGACAAGTGGCTTTGGGGCTGCTCTAGCTGCCGGTaGCGCCGGTACATCTGGATG +
Preference number: 5 (lower is better)
Translates to: VLGRSPEAWILGDKWLWGCSSCR*RRYIWM
Trigger: CATCCAGATGTACCGGCGCAACCGGCAGCTAGAGCA...GCCCCAAAGCCACTTGTCTCCTAGGATCCAGGCCTCTGGGCTTCTGCCAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 90 bp AGGCCGGCTCCCGCTCTTGGAGCCCGAAAGAGAAGGAGGGGCAAGTaGAGGCTCCATTTTGAGAAATGCGTTTGTGGCTGTGGGAGATGG +
Preference number: 5 (lower is better)
Translates to: RPAPALGARKRRRGK*RLHFEKCVCGCGRW
Trigger: CCATCTCCCACAGCCACAAACGCATTTCTCAAAATGGAGCCTCCACTTGCCCCTCCTTCTCTTTCGGGCTCCAAGAGCGGGAGCCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 90 bp TTCTCTACCAGCTTGAAGCACAGGTCCCTGGTCCTCTCAGCCAGGTaGCCTCATTACAGGGCAGTTTGGGCAGAGGTACCTCAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: FSTSLKHRSLVLSAR*PHYRAVWAEVPQGC
Trigger: GCACCCCTGAGGTACCTCTGCCCAAACTGCCCTGTAATGAGGCCACCTGGCTGAGAGGACCAGGGACCTGTGCTTCAAGCTGGTAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp TCCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGAGTGGAGGCTCCATTTaGAGAAATGCGTTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: SLLPWLEWAGSACEQGWQSGGSI*RNAFVA
Trigger: AGCCACAAACGCATTTCTCAAAATGGAGCCTCCACT...CTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTGGGCTGGCACCTCTGTaGCATTTCCCCACTTCAGCG +
Preference number: 5 (lower is better)
Translates to: SSFGLTSAPSLQERGCRAGLAPL*HFPTSA
Trigger: CGCTGAAGTGGGGAAATGCAACAGAGGTGCCAGCCC...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGGGAGCCTGGGTGGCTaGAGGGCCCATTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGGSLGG*RAHWWG
Trigger: CCCCCACCAATGGGCCCTCAAGCCACCCAGGCTCCC...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 90 bp GGACGGAGCCCCTCGAGGTTTGGGCAGCACTGGCTTGAAGGCTGTTaGGCGGATCAGGATCTTCTCCATGTTCTTCTCCAGCTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: GRSPSRFGQHWLEGC*ADQDLLHVLLQLSR
Trigger: TCTGGAAAGCTGGAGAAGAACATGGAGAAGATCCTGATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCAAACCTCGAGGGGCTCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS CCA 90 bp CATGAAGCTAGGCAGGGACGGAGCCCCTCGAGGTTTGGGCAGCACTaGCTTGAAGGCTGTTGGGCGGATCAGGATCTTCTCCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: HEARQGRSPSRFGQH*LEGCWADQDLLHVL
Trigger: AAGAACATGGAGAAGATCCTGATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCAAACCTCGAGGGGCTCCGTCCCTGCCTAGCTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS CCA 90 bp ATCTTCCAGTCCACCTCACACACAGACACGGTGTCACAGGCCTGTTaGGCACAGGCTTCCACAACAATCCGCAGTCCTTCGCACCCAGTC +
Preference number: 5 (lower is better)
Translates to: IFQSTSHTDTVSQAC*AQASTTIRSPSHPV
Trigger: GACTGGGTGCGAAGGACTGCGGATTGTTGTGGAAGCCTGTGCCCAACAGGCCTGTGACACCGTGTCTGTGTGTGAGGTGGACTGGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481129.1
CDS-3UTR CAA 90 bp CCCTGCTCCCCTGGCTGGAGTGGGCTGGAAGCGCCTGTGAACAGGGTTGGCAGTGAAGGGAGAGGCTGCTaGGTCACAAACACAAATAAA +
Preference number: 5 (lower is better)
Translates to: PCSPGWSGLEAPVNRVGSEGRGC*VTNTNK
Trigger: TTTATTTGTGTTTGTGACCAAGCAGCCTCTCCCTTC...ACTGCCAACCCTGTTCACAGGCGCTTCCAGCCCACTCCAGCCAGGGGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS TCA 90 bp AGTCCCAGTCCCGAGGCCGCTGATGACCAGGACTTAGGCATCTGCTaGAGTCATCATGCAGAGCGGGGCCAAGAAGTGGACAGAGAATTG +
Preference number: 5 (lower is better)
Translates to: SPSPEAADDQDLGIC*SHHAERGQEVDREL
Trigger: CAATTCTCTGTCCACTTCTTGGCCCCGCTCTGCATGATGACTTCAGCAGATGCCTAAGTCCTGGTCATCAGCGGCCTCGGGACTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 90 bp CGCACACAATACAGTCTCCCTAACACCCACAAGACCTTTCCCACATaGAGCCGCAGTCTCAGCCGTCACGTGGGTCCGCGTTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RTQYSLPNTHKTFPT*SRSLSRHVGPRSFF
Trigger: AAAGAAGGAACGCGGACCCACGTGACGGCTGAGACTGCGGCTGCATGTGGGAAAGGTCTTGTGGGTGTTAGGGAGACTGTATTGTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481129.1
CDS CCA 90 bp CCCACAAGACCTTTCCCACATGCAGCCGCAGTCTCAGCCGTCACGTaGGTCCGCGTTCCTTCTTTCCATAATCTTCCAGTCCACCTCACA +
Preference number: 5 (lower is better)
Translates to: PTRPFPHAAAVSAVT*VRVPSFHNLPVHLT
Trigger: TGTGAGGTGGACTGGAAGATTATGGAAAGAAGGAACGCGGACCCACGTGACGGCTGAGACTGCGGCTGCATGTGGGAAAGGTCTTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481129.1
CDS-3UTR CAA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTTTGGGCAGCACTGGCTaGAAGGCTGTTGGGCGGATC +
Preference number: 5 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSLGSTG*KAVGRI
Trigger: GATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCAA...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp GCGGTGGGGAATGAAGTGGGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGTGCTCTAGCTGCCGGTaGCGCCGGTACATCTGGATG +
Preference number: 5 (lower is better)
Translates to: AVGNEVGSNKSLWVTVNTCSSCR*RRYIWM
Trigger: CATCCAGATGTACCGGCGCAACCGGCAGCTAGAGCA...CGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACCCACTTCATTCCCCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGCTGCCCGCTGCACTTaGGCCTCATCACTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGAARCT*ASSLSA
Trigger: GGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGC...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp GTAACAGTGAACACGGGGACCTTTGAGCGGTCTGATCTTGCTCCTCCAAGTCATTCCCTACAGAGCTGGTaGCTGAGGGCCCTAGATCTC +
Preference number: 5 (lower is better)
Translates to: VTVNTGTFERSDLAPPSHSLQSW*LRALDL
Trigger: GAGATCTAGGGCCCTCAGCAACCAGCTCTGTAGGGA...ATGACTTGGAGGAGCAAGATCAGACCGCTCAAAGGTCCCCGTGTTCACTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp TCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAGAGGCTGCAGAGCTTGTGAGCTCCTGTGTTaGTGTGTGACTAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SSFGLTSAPSLQERGCRACELLC*CVTRKV
Trigger: CACCTTCCTAGTCACACACAAACACAGGAGCTCACA...AGCTCTGCAGCCTCTCTCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGACCCATGACTGGAGCTaGTGGGGCAGTGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQTHDWS*WGSGSF
Trigger: GAAGCTGCCACTGCCCCACAAGCTCCAGTCATGGGT...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp CAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGGAGAAGTCGTCCTGCAATaGCCGCTTCTCCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QDISEFFLWSDFSPLTPGEVVLQ*PLLLLQ
Trigger: CTGCAGCAGGAGAAGCGGCAATTGCAGGACGACTTC...TCCTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS-3UTR CAA 90 bp GGTAGTAACAAGAGCCTCTGGGTAACAGTGAACACGGGGACCTTTGAGCGGTCTTTGAGCGGTCTGATCTaGCTCCTCCAAGTCATAGGG +
Preference number: 5 (lower is better)
Translates to: GSNKSLWVTVNTGTFERSLSGLI*LLQVIG
Trigger: CCCTATGACTTGGAGGAGCAAGATCAGACCGCTCAA...AGACCGCTCAAAGGTCCCCGTGTTCACTGTTACCCAGAGGCTCTTGTTACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS TCA 90 bp CTTCGGCGTGTGGGGAGAGGTGGGACATTATCTAACTCCTTTGCCTaGTCTGTTCCCCTTCTTTCTCGCATGCCCTCCATTAAATCCACC +
Preference number: 5 (lower is better)
Translates to: LRRVGRGGTLSNSFA*SVPLLSRMPSIKST
Trigger: GGTGGATTTAATGGAGGGCATGCGAGAAAGAAGGGGAACAGATCAGGCAAAGGAGTTAGATAATGTCCCACCTCTCCCCACACGCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGAGCGGCAGCTGGTCATaGTTCCAGCACAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQSGSWS*FQHKGP
Trigger: TGGCCCTTTGTGCTGGAACAATGACCAGCTGCCGCT...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp AACAAGACATTTCTGAGTTCTTCCTTTGGTCTGACTTCAGCCCCCTCACTCCAGTCATTACAGGGCAGTTaGGGCAGAGGTACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: NKTFLSSSFGLTSAPSLQSLQGS*GRGTSG
Trigger: CCCTGAGGTACCTCTGCCCAAACTGCCCTGTAATGA...CTGGAGTGAGGGGGCTGAAGTCAGACCAAAGGAAGAACTCAGAAATGTCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS-3UTR CAA 90 bp CAGTGTGAAAAATATACAAGTGAAAACGAGGCCATAAACCTGGGTGAAGGGAGAGACGGATCTGAAGAGTaGGGGAAAGTCTCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: QCEKYTSENEAINLGEGRDGSEE*GKVSLP
Trigger: TGGGAGGGAGACTTTCCCCAACTCTTCAGATCCGTC...TCTCCCTTCACCCAGGTTTATGGCCTCGTTTTCACTTGTATATTTTTCACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 72 bp CGCGTCACGCGAATCCGCCGGGGCGCACGTAGGGGCTaGTCGGCGGCAGTCGGGAGCCCTCCCTCCGACGCC +
Preference number: 6 (lower is better)
Translates to: RVTRIRRGARRG*SAAVGSPPSDA
Trigger: GGCGTCGGAGGGAGGGCTCCCGACTGCCGCCGAGCAGCCCCTACGTGCGCCCCGGCGGATTCGCGTGACGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 72 bp CGGCAGTCGGGAGCCCTCCCTCCGACGCCCTGTGACTaGGTGTCTGGGGGCTCGGTTCGGCTCGACGCGGCG +
Preference number: 6 (lower is better)
Translates to: RQSGALPPTPCD*VSGGSVRLDAA
Trigger: CGCCGCGTCGAGCCGAACCGAGCCCCCAGACACGCAGTCACAGGGCGTCGGAGGGAGGGCTCCCGACTGCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 72 bp GCCTCGGCCCGAGCTCCCGCTGCTCCCGCTCCAAGGTaGCGCAGCGCCGCTCCAGCTGTTCGCGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: ASARAPAAPAPR*RSAAPAVRAPA
Trigger: TGCAGGAGCGCGAACAGCTGGAGCGGCGCTGCGCCACCTTGGAGCGGGAGCAGCGGGAGCTCGGGCCGAGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp CGCTCCCGCTGCAGCTCCACCCGCAATCGCTCCACCTaGGCCCGCAAGCTGCCCCCAACCCCGGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: RSRCSSTRNRST*ARKLPPTPAAA
Trigger: GGCAGCAGCCGGGGTTGGGGGCAGCTTGCGGGCCCAGGTGGAGCGATTGCGGGTGGAGCTGCAGCGGGAGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS TCA 72 bp TCGGCGGCAGTCGGGAGCCCTCCCTCCGACGCCCTGTaGCTGCGTGTCTGGGGGCTCGGTTCGGCTCGACGC +
Preference number: 6 (lower is better)
Translates to: SAAVGSPPSDAL*LRVWGLGSARR
Trigger: GCGTCGAGCCGAACCGAGCCCCCAGACACGCAGTCACAGGGCGTCGGAGGGAGGGCTCCCGACTGCCGCCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 72 bp AGGAGGAGGCAGGGCCCCCAAACAGCTGCGTCAGGCTaGCCTGGCTCCCAGACAGCCCGGTGGCCCGAGGAC +
Preference number: 6 (lower is better)
Translates to: RRRQGPQTAASG*PGSQTARWPED
Trigger: GTCCTCGGGCCACCGGGCTGTCTGGGAGCCAGGGCAGCCTGACGCAGCTGTTTGGGGGCCCTGCCTCCTCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS GCA 72 bp CACTTGGTCTCCTCAAGCCTCGGCCCGAGCTCCCGCTaGTCCCGCTCCAAGGTGGCGCAGCGCCGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: HLVSSSLGPSSR*SRSKVAQRRSS
Trigger: GCTGGAGCGGCGCTGCGCCACCTTGGAGCGGGAGCAGCGGGAGCTCGGGCCGAGGCTTGAGGAGACCAAGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp GAGGCAGGGCCCCCAAACAGCTGCGTCAGGCTGCCCTaGCTCCCAGACAGCCCGGTGGCCCGAGGACCCATG +
Preference number: 6 (lower is better)
Translates to: EAGPPNSCVRLP*LPDSPVARGPM
Trigger: CATGGGTCCTCGGGCCACCGGGCTGTCTGGGAGCCAGGGCAGCCTGACGCAGCTGTTTGGGGGCCCTGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS CCA 72 bp CCCTCGCCCAGAGCCATGGGAAGGCAGGTGCCCGCCTaGGGAGCTGGTGGTTGGCTCGGCACCTCCGGTGCT +
Preference number: 6 (lower is better)
Translates to: PSPRAMGRQVPA*GAGGWLGTSGA
Trigger: AGCACCGGAGGTGCCGAGCCAACCACCAGCTCCCCAGGCGGGCACCTGCCTTCCCATGGCTCTGGGCGAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp GTCTGCACAATGGCCATGGTGGCAGAGGCTCAGGCCTaGCCAGCGGCCTCGCAGGCGACCTCCGCCGCGCTG +
Preference number: 6 (lower is better)
Translates to: VCTMAMVAEAQA*PAASQATSAAL
Trigger: CAGCGCGGCGGAGGTCGCCTGCGAGGCCGCTGGCCAGGCCTGAGCCTCTGCCACCATGGCCATTGTGCAGAC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454422.1
CDS CCA 72 bp GTCTGCACAATGGCCATGGTGGCAGAGGCTCAGGCCTaGCCAGCGGCCTCGCAGGCGACCCAGCGCCACCTG +
Preference number: 6 (lower is better)
Translates to: VCTMAMVAEAQA*PAASQATQRHL
Trigger: CAGGTGGCGCTGGGTCGCCTGCGAGGCCGCTGGCCAGGCCTGAGCCTCTGCCACCATGGCCATTGTGCAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370223.7
ENST00000489526.1
CDS CCA 72 bp TGCAGCAGCTGTTGGGCCCGCTGTGCCCGCTGTGCCTaGGCCGCACAGTCCTCTCGCAGGGCCTCACGCTCT +
Preference number: 6 (lower is better)
Translates to: CSSCWARCARCA*AAQSSRRASRS
Trigger: AGAGCGTGAGGCCCTGCGAGAGGACTGTGCGGCCCAGGCACAGCGGGCACAGCGGGCCCAACAGCTGCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp GTCTGCACAATGGCCATGGTGGCAGAGGCTCAGGCCTaGCCAGCGGCCTCGCAGGCGACCTCAGCGTGGGGC +
Preference number: 6 (lower is better)
Translates to: VCTMAMVAEAQA*PAASQATSAWG
Trigger: GCCCCACGCTGAGGTCGCCTGCGAGGCCGCTGGCCAGGCCTGAGCCTCTGCCACCATGGCCATTGTGCAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426584.5
CDS TCA 72 bp GCCTGTGCTCTTGCTGGAGGAGGACCGGCCACTGTCTaGGTGGGAGGGCCCAGTAGGGACCCCTCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: ACALAGGGPATV*VGGPSRDPSGW
Trigger: CCAGCCCGAGGGGTCCCTACTGGGCCCTCCCACTCAGACAGTGGCCGGTCCTCCTCCAGCAAGAGCACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 72 bp CACCTGGGCCCGCAAGCTGCCCCCAACCCCGGCTGCTaGCCGCTGCACTTTGGCCTCATCACTCTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: HLGPQAAPNPGC*PLHFGLITLCQ
Trigger: CTGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGGGGCAGCTTGCGGGCCCAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp ATGGGAAGGCAGGTGCCCGCCTGGGGAGCTGGTGGTTaGCTCGGCACCTCCGGTGCTGTAGGTGGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: MGRQVPAWGAGG*LGTSGAVGGQA
Trigger: AGCCTGCCCACCTACAGCACCGGAGGTGCCGAGCCAACCACCAGCTCCCCAGGCGGGCACCTGCCTTCCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp GTCTGCACAATGGCCATGGTGGCAGAGGCTCAGGCCTaGCCAGCGGCCTCGCAGGCGACCCCAGACCCTCAG +
Preference number: 6 (lower is better)
Translates to: VCTMAMVAEAQA*PAASQATPDPQ
Trigger: CTGAGGGTCTGGGGTCGCCTGCGAGGCCGCTGGCCAGGCCTGAGCCTCTGCCACCATGGCCATTGTGCAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429732.5
CDS CAA 90 bp TGGGCCCGCAAGCTGCCCCCAACCCCGGCTGCTGCCCGCTGCACTTaGGCCTCATCACTCTCTGCCAGGAGGAATGGGTCAGCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: WARKLPPTPAAARCT*ASSLSARRNGSAVA
Trigger: TGCCACCGCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGGGGCAGCTTGCGGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp GTCTGCACAATGGCCATGGTGGCAGAGGCTCAGGCCTaGCCAGCGGCCTCGCAGGCGACCTGTAAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: VCTMAMVAEAQA*PAASQATCKQG
Trigger: GCCCTGCTTACAGGTCGCCTGCGAGGCCGCTGGCCAGGCCTGAGCCTCTGCCACCATGGCCATTGTGCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 72 bp GGTGGTGGGCCGCGGAGGTGGGCATTGTGTGCCCGCTaGTCTCGGGCATCCTCAACATCACTGCTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: GGGPRRWALCAR*SRASSTSLLGL
Trigger: CAGCCCAAGCAGTGATGTTGAGGATGCCCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
ENST00000481129.1
ENST00000489526.1
CDS GCA 72 bp GCCTCCCGGTCTCGGAGCTTTCCTTCCAGGACACAGTaGAGCAGGGCCTCATCCGAAGGAGGTGGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: ASRSRSFPSRTQ*SRASSEGGGGG
Trigger: CCCGCCTCCACCTCCTTCGGATGAGGCCCTGCTGCACTGTGTCCTGGAAGGAAAGCTCCGAGACCGGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 72 bp TCTCGCAGGGCCTCACGCTCTCGCTGCCAGTGCCGCTaGCGCTCCTCGTATGCCTGGCACATGGTAGCCTCA +
Preference number: 6 (lower is better)
Translates to: SRRASRSRCQCR*RSSYAWHMVAS
Trigger: TGAGGCTACCATGTGCCAGGCATACGAGGAGCGGCAGCGGCACTGGCAGCGAGAGCGTGAGGCCCTGCGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 72 bp CAGTCCTCTCGCAGGGCCTCACGCTCTCGCTGCCAGTaGCGCTGCCGCTCCTCGTATGCCTGGCACATGGTA +
Preference number: 6 (lower is better)
Translates to: QSSRRASRSRCQ*RCRSSYAWHMV
Trigger: TACCATGTGCCAGGCATACGAGGAGCGGCAGCGGCACTGGCAGCGAGAGCGTGAGGCCCTGCGAGAGGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 72 bp GCCCGCAAGCTGCCCCCAACCCCGGCTGCTGCCCGCTaGACTTTGGCCTCATCACTCTCTGCCAGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: ARKLPPTPAAAR*TLASSLSARRN
Trigger: ATTCCTCCTGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTGGGGGCAGCTTGCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp GTCTGCACAATGGCCATGGTGGCAGAGGCTCAGGCCTaGCCAGCGGCCTCGCAGGCGACCTTCTCGCACACA +
Preference number: 6 (lower is better)
Translates to: VCTMAMVAEAQA*PAASQATFSHT
Trigger: TGTGTGCGAGAAGGTCGCCTGCGAGGCCGCTGGCCAGGCCTGAGCCTCTGCCACCATGGCCATTGTGCAGAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481129.1
CDS GCA 72 bp GGCTGCTGCCCGCTGCACTTTGGCCTCATCACTCTCTaGCAGGAGGAATGGGTCAGCGGTGGCAGGTGGCAC +
Preference number: 6 (lower is better)
Translates to: GCCPLHFGLITL*QEEWVSGGRWH
Trigger: GTGCCACCTGCCACCGCTGACCCATTCCTCCTGGCAGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp GAGACAGGGATGAGCTTTGGTGGTGGGCCGCGGAGGTaGGCATTGTGTGCCCGCTGCTCTCGGGCATCCTCA +
Preference number: 6 (lower is better)
Translates to: ETGMSFGGGPRR*ALCARCSRASS
Trigger: TGAGGATGCCCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
ENST00000481129.1
ENST00000489526.1
CDS CCA 72 bp CTCCAGCTTTCCAGAGACAGGGATGAGCTTTGGTGGTaGGCCGCGGAGGTGGGCATTGTGTGCCCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LQLSRDRDELWW*AAEVGIVCPLL
Trigger: GAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
ENST00000481129.1
ENST00000489526.1
CDS CCA 72 bp AGTGGTGGGAGCCTGGGTGGCTTGAGGGCCCATTGGTaGGGGGAGCCTGTTTCCTTCTCTCTTCGGCGTGTG +
Preference number: 6 (lower is better)
Translates to: SGGSLGGLRAHW*GEPVSFSLRRV
Trigger: CACACGCCGAAGAGAGAAGGAAACAGGCTCCCCCCACCAATGGGCCCTCAAGCCACCCAGGCTCCCACCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CAA 72 bp GGGATGAGCTTTGGTGGTGGGCCGCGGAGGTGGGCATaGTGTGCCCGCTGCTCTCGGGCATCCTCAACATCA +
Preference number: 6 (lower is better)
Translates to: GMSFGGGPRRWA*CARCSRASSTS
Trigger: TGATGTTGAGGATGCCCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
ENST00000481129.1
ENST00000489526.1
CDS CAA 90 bp CCAGAGACAGGGATGAGCTTTGGTGGTGGGCCGCGGAGGTGGGCATaGTGTGCCCGCTGCTCTCGGGCATCCTCAACATCACTGCTTGGG +
Preference number: 6 (lower is better)
Translates to: PETGMSFGGGPRRWA*CARCSRASSTSLLG
Trigger: CCCAAGCAGTGATGTTGAGGATGCCCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
ENST00000481129.1
ENST00000489526.1
CDS CCA 72 bp CTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTGGTaGTGGGCCGCGGAGGTGGGCATTGTGTGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: LLQLSRDRDELW*WAAEVGIVCPL
Trigger: CAGCGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
ENST00000481129.1
ENST00000489526.1
CDS CCA 72 bp AGGCAGGGACGGAGCCCCTCGAGGTTTGGGCAGCACTaGCTTGAAGGCTGTTGGGCGGATCAGGATCTTCTC +
Preference number: 6 (lower is better)
Translates to: RQGRSPSRFGQH*LEGCWADQDLL
Trigger: GAGAAGATCCTGATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCAAACCTCGAGGGGCTCCGTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS CCA 72 bp CACCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTaGTGGTGGGCCGCGGAGGTGGGCATTGTGTGCCCG +
Preference number: 6 (lower is better)
Translates to: HLLQLSRDRDEL*WWAAEVGIVCP
Trigger: CGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489526.1
CDS TCA 72 bp GGGACGGAGCCCCTCGAGGTTTGGGCAGCACTGGCTTaGAGGCTGTTGGGCGGATCAGGATCTTCTCCATGT +
Preference number: 6 (lower is better)
Translates to: GTEPLEVWAALA*RLLGGSGSSPC
Trigger: ACATGGAGAAGATCCTGATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCAAACCTCGAGGGGCTCCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS TCA 72 bp GGCCCAGCCACTAAATGCCAGGGGTTTGTCAGCAGCTaGAGAGGAGGAGGAAGAGGAGGAGGAGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: GPATKCQGFVSS*RGGGRGGGGGR
Trigger: CCTGCCTCCTCCTCCTCCTCTTCCTCCTCCTCTTCAGCTGCTGACAAACCCCTGGCATTTAGTGGCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000454422.1
CDS TCA 72 bp GTAGCCTCATTCTCGTCCAGACTGTCCCGCAGCTGCTaGAGCTCTGCCTCCCGGTCTCGGAGCTTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: VASFSSRLSRSC*SSASRSRSFPS
Trigger: GGAAGGAAAGCTCCGAGACCGGGAGGCAGAGCTTCAGCAGCTGCGGGACAGTCTGGACGAGAATGAGGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 72 bp TCCACCGCCCTCCTTCCCACCCAAGTCAAAAGACACTaGGAACCAGGAAGAGGTGTCCACGCTGGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: STALLPTQVKRH*EPGRGVHAGAG
Trigger: TCCTGCCCCAGCGTGGACACCTCTTCCTGGTTCGCAGTGTCTTTTGACTTGGGTGGGAAGGAGGGCGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 72 bp GTTCTTCTCCAGCTTTCCAGAGACAGGGATGAGCTTTaGTGGTGGGCCGCGGAGGTGGGCATTGTGTGCCCG +
Preference number: 6 (lower is better)
Translates to: VLLQLSRDRDEL*WWAAEVGIVCP
Trigger: CGGGCACACAATGCCCACCTCCGCGGCCCACCACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS CAA 72 bp AGGGACGGAGCCCCTCGAGGTTTGGGCAGCACTGGCTaGAAGGCTGTTGGGCGGATCAGGATCTTCTCCATG +
Preference number: 6 (lower is better)
Translates to: RDGAPRGLGSTG*KAVGRIRIFSM
Trigger: CATGGAGAAGATCCTGATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCAAACCTCGAGGGGCTCCGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS TCA 72 bp AGAGGGCTGGAGCTGGTTCAGGGCCGGAGACGGATCTaGAGAGTTGGGGAAAGTCTCCCTCCCACCCAAACT +
Preference number: 6 (lower is better)
Translates to: RGLELVQGRRRI*RVGESLPPTQT
Trigger: AGTTTGGGTGGGAGGGAGACTTTCCCCAACTCTTCAGATCCGTCTCCGGCCCTGAACCAGCTCCAGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 72 bp ATTCTCGTCCAGACTGTCCCGCAGCTGCTGAAGCTCTaGCTCCCGGTCTCGGAGCTTTCCTTCCAGGACACA +
Preference number: 6 (lower is better)
Translates to: ILVQTVPQLLKL*LPVSELSFQDT
Trigger: TGTGTCCTGGAAGGAAAGCTCCGAGACCGGGAGGCAGAGCTTCAGCAGCTGCGGGACAGTCTGGACGAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS GCA 72 bp CCCAAACTCCAAGGACCAGTCAAGCGGGGTCAAGTCTaGGATCACGAGTTCCCATTCTGCGGCGGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: PKLQGPVKRGQV*DHEFPFCGGKP
Trigger: TGGCTTCCCGCCGCAGAATGGGAACTCGTGATCGCAGACTTGACCCCGCTTGACTGGTCCTTGGAGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS GCA 72 bp TACAGTCTCCCTAACACCCACAAGACCTTTCCCACATaGAGCCGCAGTCTCAGCCGTCACGTGGGTCCGCGT +
Preference number: 6 (lower is better)
Translates to: YSLPNTHKTFPT*SRSLSRHVGPR
Trigger: ACGCGGACCCACGTGACGGCTGAGACTGCGGCTGCATGTGGGAAAGGTCTTGTGGGTGTTAGGGAGACTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481129.1
CDS CCA 72 bp CAGCTGCTGCCCCTCTGGCAGAGCTCCCTACAGAGCTaGTTGCTGAGGGCCCTAGATCTCAGTAGCAGTGAT +
Preference number: 6 (lower is better)
Translates to: QLLPLWQSSLQS*LLRALDLSSSD
Trigger: ATCACTGCTACTGAGATCTAGGGCCCTCAGCAACCAGCTCTGTAGGGAGCTCTGCCAGAGGGGCAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370220.1
ENST00000370223.7
CDS CCA 72 bp GTCCTCTCAGCCAGGTGGCCTCATTACAGGGCAGTTTaGGCAGAGGTACCTCAGGGGTGCAATCAGCACCTC +
Preference number: 6 (lower is better)
Translates to: VLSARWPHYRAV*AEVPQGCNQHL
Trigger: GAGGTGCTGATTGCACCCCTGAGGTACCTCTGCCCAAACTGCCCTGTAATGAGGCCACCTGGCTGAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CAA 72 bp GGTCCTCTCAGCCAGGTGGCCTCATTACAGGGCAGTTaGGGCAGAGGTACCTCAGGGGTGCAATCAGCACCT +
Preference number: 6 (lower is better)
Translates to: GPLSQVASLQGS*GRGTSGVQSAP
Trigger: AGGTGCTGATTGCACCCCTGAGGTACCTCTGCCCAAACTGCCCTGTAATGAGGCCACCTGGCTGAGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CAA 90 bp AAGCTAGGCAGGGACGGAGCCCCTCGAGGTTTGGGCAGCACTGGCTaGAAGGCTGTTGGGCGGATCAGGATCTTCTCCATGTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: KLGRDGAPRGLGSTG*KAVGRIRIFSMFFS
Trigger: GGAGAAGAACATGGAGAAGATCCTGATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCAAACCTCGAGGGGCTCCGTCCCTGCCTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS TCA 72 bp CCCCTGGGCCCCAAACCACACTGCCCAATGCTGGTCTaGACAGGGCTGAGGAGTGAATTCACTCAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: PLGPKPHCPMLV*TGLRSEFTQQR
Trigger: TCTCTGCTGAGTGAATTCACTCCTCAGCCCTGTTCAGACCAGCATTGGGCAGTGTGGTTTGGGGCCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 72 bp TCCACCTCACACACAGACACGGTGTCACAGGCCTGTTaGGCACAGGCTTCCACAACAATCCGCAGTCCTTCG +
Preference number: 6 (lower is better)
Translates to: STSHTDTVSQAC*AQASTTIRSPS
Trigger: CGAAGGACTGCGGATTGTTGTGGAAGCCTGTGCCCAACAGGCCTGTGACACCGTGTCTGTGTGTGAGGTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481129.1
CDS CAA 72 bp GTCCACCTCACACACAGACACGGTGTCACAGGCCTGTaGGGCACAGGCTTCCACAACAATCCGCAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: VHLTHRHGVTGL*GTGFHNNPQSF
Trigger: GAAGGACTGCGGATTGTTGTGGAAGCCTGTGCCCAACAGGCCTGTGACACCGTGTCTGTGTGTGAGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481129.1
CDS CAA 90 bp AATCTTCCAGTCCACCTCACACACAGACACGGTGTCACAGGCCTGTaGGGCACAGGCTTCCACAACAATCCGCAGTCCTTCGCACCCAGT +
Preference number: 6 (lower is better)
Translates to: NLPVHLTHRHGVTGL*GTGFHNNPQSFAPS
Trigger: ACTGGGTGCGAAGGACTGCGGATTGTTGTGGAAGCCTGTGCCCAACAGGCCTGTGACACCGTGTCTGTGTGTGAGGTGGACTGGAAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481129.1
CDS TCA 72 bp ACAGGGCTGAGGAGTGAATTCACTCAGCAGAGATGCTaGGAGGCATGGGAGGCCTGGATGATTACCGCAGGG +
Preference number: 6 (lower is better)
Translates to: TGLRSEFTQQRC*EAWEAWMITAG
Trigger: CCCTGCGGTAATCATCCAGGCCTCCCATGCCTCTCAGCATCTCTGCTGAGTGAATTCACTCCTCAGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 72 bp CCCTCGAGGTTTGGGCAGCACTGGCTTGAAGGCTGTTaGGCGGATCAGGATCTTCTCCATGTTCTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: PSRFGQHWLEGC*ADQDLLHVLLQ
Trigger: CTGGAGAAGAACATGGAGAAGATCCTGATCCGCCCAACAGCCTTCAAGCCAGTGCTGCCCAAACCTCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370220.1
ENST00000370223.7
ENST00000426584.5
ENST00000429732.5
ENST00000454422.1
CDS CCA 72 bp CACAGGTGTCCTTTGGGGTCTCCTGCCTCCCAGAGGTaGATGCAGGCTCATACCAGTTTCCATGACAACTCC +
Preference number: 6 (lower is better)
Translates to: HRCPLGSPASQR*MQAHTSFHDNS
Trigger: GGAGTTGTCATGGAAACTGGTATGAGCCTGCATCCACCTCTGGGAGGCAGGAGACCCCAAAGGACACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 72 bp CCTTTCCCACATGCAGCCGCAGTCTCAGCCGTCACGTaGGTCCGCGTTCCTTCTTTCCATAATCTTCCAGTC +
Preference number: 6 (lower is better)
Translates to: PFPHAAAVSAVT*VRVPSFHNLPV
Trigger: GACTGGAAGATTATGGAAAGAAGGAACGCGGACCCACGTGACGGCTGAGACTGCGGCTGCATGTGGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481129.1
CDS TCA 72 bp CTCCCAGAGGTGGATGCAGGCTCATACCAGTTTCCATaGCAACTCCTAGCCTCTGCACACCCAATCGGTGAG +
Preference number: 6 (lower is better)
Translates to: LPEVDAGSYQFP*QLLASAHPIGE
Trigger: CTCACCGATTGGGTGTGCAGAGGCTAGGAGTTGTCATGGAAACTGGTATGAGCCTGCATCCACCTCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 72 bp CCCGCTCTTGGAGCCCGAAAGAGAAGGAGGGGCAAGTaGAGGCTCCATTTTGAGAAATGCGTTTGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: PALGARKRRRGK*RLHFEKCVCGC
Trigger: ACAGCCACAAACGCATTTCTCAAAATGGAGCCTCCACTTGCCCCTCCTTCTCTTTCGGGCTCCAAGAGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS TCA 72 bp ACACTGCCCAATGCTGGTCTGAACAGGGCTGAGGAGTaGATTCACTCAGCAGAGATGCTGAGAGGCATGGGA +
Preference number: 6 (lower is better)
Translates to: TLPNAGLNRAEE*IHSAEMLRGMG
Trigger: TCCCATGCCTCTCAGCATCTCTGCTGAGTGAATTCACTCCTCAGCCCTGTTCAGACCAGCATTGGGCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CCA 72 bp TCTGCTGAAGTCATCATGCAGAGCGGGGCCAAGAAGTaGACAGAGAATTGCACTGGGAGTAGGAGTGTGTGC +
Preference number: 6 (lower is better)
Translates to: SAEVIMQSGAKK*TENCTGSRSVC
Trigger: GCACACACTCCTACTCCCAGTGCAATTCTCTGTCCACTTCTTGGCCCCGCTCTGCATGATGACTTCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS TCA 72 bp CTGACCAAACACCTCCTTGACATCAGTAACAAGCCCTaGTCCCCACCAAGACTCCCCCTTCAAGTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: LTKHLLDISNKP*SPPRLPLQVLE
Trigger: TTCCAGCACTTGAAGGGGGAGTCTTGGTGGGGATCAGGGCTTGTTACTGATGTCAAGGAGGTGTTTGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS TCA 72 bp GTGGGGAGAGGTGGGACATTATCTAACTCCTTTGCCTaGTCTGTTCCCCTTCTTTCTCGCATGCCCTCCATT +
Preference number: 6 (lower is better)
Translates to: VGRGGTLSNSFA*SVPLLSRMPSI
Trigger: AATGGAGGGCATGCGAGAAAGAAGGGGAACAGATCAGGCAAAGGAGTTAGATAATGTCCCACCTCTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS TCA 72 bp AAAGCCTGTGAAAGTTATAAATGTGGATCTAACAAGTaGATTTGTGGTGTGTGGGAGAGACGGTGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: KACESYKCGSNK*ICGVWERRCLD
Trigger: GTCCAGGCACCGTCTCTCCCACACACCACAAATTCACTTGTTAGATCCACATTTATAACTTTCACAGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CAA 90 bp GGACAGAGAATTGCACTGGGAGTAGGAGTGTGTGCATTTAGTTATTaGTTGTGTGACTACATGCACAGGAGCATGAAAATGAACACGTGT +
Preference number: 6 (lower is better)
Translates to: GQRIALGVGVCAFSY*LCDYMHRSMKMNTC
Trigger: ACACGTGTTCATTTTCATGCTCCTGTGCATGTAGTCACACAACAAATAACTAAATGCACACACTCCTACTCCCAGTGCAATTCTCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1
CDS CAA 72 bp ATTGCACTGGGAGTAGGAGTGTGTGCATTTAGTTATTaGTTGTGTGACTACATGCACAGGAGCATGAAAATG +
Preference number: 6 (lower is better)
Translates to: IALGVGVCAFSY*LCDYMHRSMKM
Trigger: CATTTTCATGCTCCTGTGCATGTAGTCACACAACAAATAACTAAATGCACACACTCCTACTCCCAGTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370220.1