RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LZTR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000099949

Ensembl transcript IDs: ENST00000414985.5, ENST00000415354.6, ENST00000415817.2, ENST00000439171.5, ENST00000443265.5, ENST00000452988.5, ENST00000461510.1, ENST00000463909.1, ENST00000480895.1, ENST00000491432.5, ENST00000492480.1, ENST00000493460.2, ENST00000495142.6, ENST00000497716.5, ENST00000498649.1, ENST00000642151.1, ENST00000643578.1, ENST00000644435.1, ENST00000645935.1, ENST00000646124.2, ENST00000646506.1

Found 1101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCCCCCGAAGATGTACATGGCGTCCGAGATGACAGCAGCCGCGTaGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGC +
Preference number: 1 (lower is better)
Translates to: VPPKMYMASEMTAAA*KSLPLGSSEAGWVG
Trigger: GCCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTCATCTCGGACGCCATGTACATCTTCGGGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 90 bp GTCAAAGGCCACCATGGTATGCCCGTAGCGCCGCTGCGGGGGTGGTaGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCT +
Preference number: 1 (lower is better)
Translates to: VKGHHGMPVAPLRGW*GAPEQVFSWDACPP
Trigger: AGGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACCACCCCCGCAGCGGCGCTACGGGCATACCATGGTGGCCTTTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR CCA 90 bp GTCAAAGGCCACCATGGTATGCCCGTAGCGCCGCTGCGGGGGTGGTaGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGT +
Preference number: 1 (lower is better)
Translates to: VKGHHGMPVAPLRGW*GAPEQVFSWDACPR
Trigger: ACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACCACCCCCGCAGCGGCGCTACGGGCATACCATGGTGGCCTTTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR TCA 90 bp CTCCTCCCGCATGTTGGAGGAGCCTTGGTGACAGGCCCCAGTGCCTaGGTCCACAACACGCCCAGGCCACAGAAGCCAGGCCAAGCCCCA +
Preference number: 1 (lower is better)
Translates to: LLPHVGGALVTGPSA*VHNTPRPQKPGQAP
Trigger: TGGGGCTTGGCCTGGCTTCTGTGGCCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACCAAGGCTCCTCCAACATGCGGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 90 bp GTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATaGGCAGGCGCCACAGGGCCTCAGATGTCGGCGCCCAGCTCTGCG +
Preference number: 1 (lower is better)
Translates to: VFSVGRAGRHGDSSQ*AGATGPQMSAPSSA
Trigger: CGCAGAGCTGGGCGCCGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 90 bp GCAGGCGCCACAGGGCCTCAGATGTCGGCGCCCAGCTCTGCGCACTaGTTGTCTGAGATGTGGGAGGCCAGGGAGTCTATGATGTCCAGC +
Preference number: 1 (lower is better)
Translates to: AGATGPQMSAPSSAH*LSEMWEARESMMSS
Trigger: GCTGGACATCATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCGACATCTGAGGCCCTGTGGCGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR CCA 90 bp GGCCAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTaGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTA +
Preference number: 1 (lower is better)
Translates to: GQAPLGGRPKVSPHF*VVSPSLSRGLASTL
Trigger: TAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 90 bp GCACTCCACTTCCAGGTGCTGACATATCCTCCCCAGCCATGGTCCTaGGCCTGCTGTGTCCTCACCTCAAGGGCCTCCCGGCTCAGCCTC +
Preference number: 1 (lower is better)
Translates to: ALHFQVLTYPPQPWS*ACCVLTSRASRLSL
Trigger: GAGGCTGAGCCGGGAGGCCCTTGAGGTGAGGACACAGCAGGCCCAGGACCATGGCTGGGGAGGATATGTCAGCACCTGGAAGTGGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR CCA 90 bp AGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCTGCTTaGCTGAGGTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACT +
Preference number: 1 (lower is better)
Translates to: RASHWAAPRQAGWAA*LRWCQSPGQTHLGT
Trigger: AGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR TCA 90 bp CCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCTGCTTGGCTaGGGTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACTTCTT +
Preference number: 1 (lower is better)
Translates to: PPTGQLRGRLGGLLG*GGAKVQAKHISGLL
Trigger: AAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR TCA 90 bp TGTTGTTGTCCACCGTGCCCCCGAAGATGTACATGGCGTCCGAGATaGCAGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGG +
Preference number: 1 (lower is better)
Translates to: CCCPPCPRRCTWRPR*QQPRGRASHWAAPR
Trigger: CCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTCATCTCGGACGCCATGTACATCTTCGGGGGCACGGTGGACAACAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR GCA 90 bp GTGCCAATGTCCACTGGCTGGTCCAAGGGAGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATCTCCACTATCAGTGGAGAGGAGAGG +
Preference number: 1 (lower is better)
Translates to: VPMSTGWSKGVRGGG*CFRRTISTISGEER
Trigger: CCTCTCCTCTCCACTGATAGTGGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 90 bp AGACAGGTAAGGCCACTGACCTACATCTGGGGGTCTGCTAAGCCATaGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGC +
Preference number: 1 (lower is better)
Translates to: RQVRPLTYIWGSAKP*AAQGAEASSGGRAS
Trigger: GCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGGCCTTACCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 90 bp ATCTTCCTGCGAAGCCAGCGGCTCCGCGCTGTGACAATGGCTACGTaGCCCTGCACGCACTCCTCCTTCTCACCCAGCACGAACTCCACG +
Preference number: 1 (lower is better)
Translates to: IFLRSQRLRAVTMAT*PCTHSSFSPSTNST
Trigger: CGTGGAGTTCGTGCTGGGTGAGAAGGAGGAGTGCGTGCAGGGCCACGTAGCCATTGTCACAGCGCGGAGCCGCTGGCTTCGCAGGAAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR TCA 90 bp GGGGCCAGCCTGGAGGCCTTCACAGCCCTTCCCAATGTGACTGGGTaGCCCCAGGTGGAGGCAGGAGTTGACAGCATGGATAGAGACAGG +
Preference number: 1 (lower is better)
Translates to: GASLEAFTALPNVTG*PQVEAGVDSMDRDR
Trigger: CCTGTCTCTATCCATGCTGTCAACTCCTGCCTCCACCTGGGGTCACCCAGTCACATTGGGAAGGGCTGTGAAGGCCTCCAGGCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 90 bp AAAGTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCC +
Preference number: 1 (lower is better)
Translates to: KVAGAGGQDSLVGWP*VPVKQQSDVTEFRA
Trigger: GGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTACTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
3UTR CCA 90 bp AAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCAGCAAGATaGGGGGATCTCGCCACTCTGGGCCACCTCCTCCCAGCAGGTGAG +
Preference number: 1 (lower is better)
Translates to: KHLVPAHSHGEVAAR*GDLATLGHLLPAGE
Trigger: CTCACCTGCTGGGAGGAGGTGGCCCAGAGTGGCGAGATCCCCCCATCTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR TCA 90 bp GCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGGCCCCACTCTaGGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCA +
Preference number: 1 (lower is better)
Translates to: ATSCGNWVDGCVAPL*VNAPGPHGWALQPA
Trigger: TGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACACCCATCTACCCAGTTTCCACAAGATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR GCA 90 bp TCTGAGATGTGGGAGGCCAGGGAGTCTATGATGTCCAGCAGCAGCTaGTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTG +
Preference number: 1 (lower is better)
Translates to: SEMWEARESMMSSSS*WLSDRRVGNLETLV
Trigger: CACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCTCCCACATCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 90 bp ACTCTGAGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTaGACTCCACTTCCAGGTGCTGACATATCCTCCCCAGCCATGGTC +
Preference number: 1 (lower is better)
Translates to: TLSECTWPTWLGAAA*TPLPGADISSPAMV
Trigger: GACCATGGCTGGGGAGGATATGTCAGCACCTGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR GCA 90 bp AGGAGGCTTCTGGGTAGGCCCCTCCAGGAGGGATTTGGAGGAGGCTaGCCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTA +
Preference number: 1 (lower is better)
Translates to: RRLLGRPLQEGFGGG*PVGVAGATSCGNWV
Trigger: TACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGGGCAGCCTCCTCCAAATCCCTCCTGGAGGGGCCTACCCAGAAGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646124.2
3UTR CCA 90 bp CGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCTaGGCACCATCTCCCCGATGGAGATGTTCACCTGCCCATCTTCGG +
Preference number: 1 (lower is better)
Translates to: RRSRCSAAWTRRPAC*APSPRWRCSPAHLR
Trigger: CCGAAGATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR CCA 90 bp GAGATGTGGGAGGCCAGGGAGTCTATGATGTCCAGCAGCAGCTGCTaGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAAC +
Preference number: 1 (lower is better)
Translates to: EMWEARESMMSSSSC*LSDRRVGNLETLVN
Trigger: GTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCTCCCACATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR CCA 90 bp AGATGGGTGTGTGGCCCCACTCTGAGTGAATGCACCTGGCCCACATaGCTGGGCGCTGCAGCCTGCACTCCACTTCCAGGTGCTGACATA +
Preference number: 1 (lower is better)
Translates to: RWVCGPTLSECTWPT*LGAAACTPLPGADI
Trigger: TATGTCAGCACCTGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACACCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR CCA 90 bp AAACTGGGTAGATGGGTGTGTGGCCCCACTCTGAGTGAATGCACCTaGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCAGGT +
Preference number: 1 (lower is better)
Translates to: KLGRWVCGPTLSECT*PTWLGAAACTPLPG
Trigger: ACCTGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACACCCATCTACCCAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR CCA 90 bp TCGCCACTCTGGGCCACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTaGAGGCCAATTGTCCACATGTCATTCAACCTGGCGTTGCCGTCA +
Preference number: 1 (lower is better)
Translates to: SPLWATSSQQVSSRS*RPIVHMSFNLALPS
Trigger: TGACGGCAACGCCAGGTTGAATGACATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCCCAGAGTGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR CCA 90 bp AGGGTCAGCATAGAGCAGGGTTGCAGACTGGTTCAAGGAGGCTTCTaGGTAGGCCCCTCCAGGAGGGATTTGGAGGAGGCTGCCCTGTGG +
Preference number: 1 (lower is better)
Translates to: RVSIEQGCRLVQGGF*VGPSRRDLEEAALW
Trigger: CCACAGGGCAGCCTCCTCCAAATCCCTCCTGGAGGGGCCTACCCAGAAGCCTCCTTGAACCAGTCTGCAACCCTGCTCTATGCTGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646124.2
3UTR TCA 90 bp GCACCATCTCCCCGATGGAGATGTTCACCTGCCCATCTTCGGGCATaGAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCA +
Preference number: 1 (lower is better)
Translates to: APSPRWRCSPAHLRA*RTGTWLQSSWSGRP
Trigger: TGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR TCA 90 bp AGTAGGGGGCCGCAAACAAGTAGAGCGAGTCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCT +
Preference number: 1 (lower is better)
Translates to: SRGPQTSRASPRAAC*PRRSRCSAAWTRRP
Trigger: AGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTACTTGTTTGCGGCCCCCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 90 bp CCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGATGGAGATGTTCACCTGCCCATCTT +
Preference number: 1 (lower is better)
Translates to: PRRSRCSAAWTRRPA*WAPSPRWRCSPAHL
Trigger: AAGATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR GCA 90 bp TTGTGGAAACTGGGTAGATGGGTGTGTGGCCCCACTCTGAGTGAATaGACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTT +
Preference number: 1 (lower is better)
Translates to: LWKLGRWVCGPTLSE*TWPTWLGAAACTPL
Trigger: AAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACACCCATCTACCCAGTTTCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR CCA 90 bp GGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTaGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTC +
Preference number: 1 (lower is better)
Translates to: GFKVAGAGGQDSLVG*PWVPVKQQSDVTEF
Trigger: GAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTACTTTGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
3UTR CCA 90 bp CAAAGTCTCTCCCCACTTCTGGGTGGTGAGCCCATCACTGAGCCGTaGCCTCGCATCCACACTACACCAGGAGAGGGTGATGACAGGAGG +
Preference number: 1 (lower is better)
Translates to: QSLSPLLGGEPITEP*PRIHTTPGEGDDRR
Trigger: CCTCCTGTCATCACCCTCTCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAGAAGTGGGGAGAGACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 90 bp CCCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATaGGTGTGTGGCCCCACTCTGAGTGAATGCACCTGGCCCACATGG +
Preference number: 1 (lower is better)
Translates to: PCGCGRSHILWKLGR*VCGPTLSECTWPTW
Trigger: CCATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR CCA 90 bp GCGAGGGGGCGGCTGCTGCTTCCGCCGCACAATCTCCACTATCAGTaGAGAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCTGGTT +
Preference number: 1 (lower is better)
Translates to: ARGRLLLPPHNLHYQ*RGEALELLHHDHLV
Trigger: AACCAGGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 90 bp CAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCTaGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGG +
Preference number: 1 (lower is better)
Translates to: QQERGPGILFPVRER*LPALEWIHMGPSLG
Trigger: CCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCAGCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR GCA 90 bp TGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTaGGTTTTGTCAGCTGCCTCCAGGATCTGCAGCACGTTCTGCACC +
Preference number: 1 (lower is better)
Translates to: WCTMMCRQCRFMSSA*VLSAASRICSTFCT
Trigger: GGTGCAGAACGTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR CCA 90 bp CCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCCTaGAATCCTGTTCCCAGTAAGGGAGCGCTGGCTCCCAGCACTAGA +
Preference number: 1 (lower is better)
Translates to: PRSCGFMAATTRKGS*NPVPSKGALAPSTR
Trigger: TCTAGTGCTGGGAGCCAGCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR GCA 90 bp GAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTaGCTGCGTTTTGTCAGCTGCCTCCAGGATCTGCAGCACGTTCTG +
Preference number: 1 (lower is better)
Translates to: ELVHNDVQAVPLHVQ*LRFVSCLQDLQHVL
Trigger: CAGAACGTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 90 bp AGTCTAGATCAGGGTTCAGTGACAAGGGTCAGCATAGAGCAGGGTTaGAGACTGGTTCAAGGAGGCTTCTGGGTAGGCCCCTCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: SLDQGSVTRVSIEQG*RLVQGGFWVGPSRR
Trigger: CCTCCTGGAGGGGCCTACCCAGAAGCCTCCTTGAACCAGTCTGCAACCCTGCTCTATGCTGACCCTTGTCACTGAACCCTGATCTAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646124.2
3UTR GCA 90 bp GTACTGGCGGCACAGCTGCTCCAGGCGGCACAACTGGAAGCTCAGTaGCAGTTTGTACACATCCATGATGAGCAGCACATCCTCCACATG +
Preference number: 1 (lower is better)
Translates to: VLAAQLLQAAQLEAQ*QFVHIHDEQHILHM
Trigger: CATGTGGAGGATGTGCTGCTCATCATGGATGTGTACAAACTGGCACTGAGCTTCCAGTTGTGCCGCCTGGAGCAGCTGTGCCGCCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR TCA 90 bp CAGGTGCAAGAGGCGTTCTTCATATTCAGAAGGATTCGAGGGAACTaGCCGTCCTCCCTCCACCCCACTGGCCAGAGTACTCACGTCTTG +
Preference number: 1 (lower is better)
Translates to: QVQEAFFIFRRIRGN*PSSLHPTGQSTHVL
Trigger: CAAGACGTGAGTACTCTGGCCAGTGGGGTGGAGGGAGGACGGTCAGTTCCCTCGAATCCTTCTGAATATGAAGAACGCCTCTTGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR GCA 90 bp TCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGTTGTTGTAGAAGCCGTAGTAGTAGG +
Preference number: 1 (lower is better)
Translates to: SAARSAPSRSSPGSA*STPAAGCCRSRSSR
Trigger: CCTACTACTACGGCTTCTACAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 90 bp AACTTGGAGACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTaGCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGG +
Preference number: 1 (lower is better)
Translates to: NLETLVNWCTMMCRQ*RFMSSACVLSAASR
Trigger: CCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTCTCCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 90 bp AGGGTGGGCAACTTGGAGACCTTGGTGAACTGGTGCACAATGATGTaGAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCT +
Preference number: 1 (lower is better)
Translates to: RVGNLETLVNWCTMM*RQCRFMSSACVLSA
Trigger: AGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 90 bp CAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATaGCTTCATGTCCTGGATCAGAGATGTGCCAATGTCCACTGGCTG +
Preference number: 1 (lower is better)
Translates to: QQSDVTEFRARSLQV*LHVLDQRCANVHWL
Trigger: CAGCCAGTGGACATTGGCACATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 90 bp CACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATaGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTA +
Preference number: 1 (lower is better)
Translates to: HPKESRSLPQGAVAS*QPQQERGPGILFPV
Trigger: TACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR TCA 90 bp AGACCTCTCAGGACCTGCAGGCCCCTCTGGTCTTCTGCCATTATTTaGGATCTATGCAGGCCACGTCTGTTACTGGTGGCACTGACCAAG +
Preference number: 1 (lower is better)
Translates to: RPLRTCRPLWSSAII*DLCRPRLLLVALTK
Trigger: CTTGGTCAGTGCCACCAGTAACAGACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGGTCCTGAGAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR TCA 90 bp TGTGTGGTGGGTAGCACTGCTGTGGCTTTAATGGAGGCTTGTCTGTaGCAGAATACTCAGCAAGGGACACGGGGGACTTTGCTGGCTTCT +
Preference number: 1 (lower is better)
Translates to: CVVGSTAVALMEACL*QNTQQGTRGTLLAS
Trigger: AGAAGCCAGCAAAGTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCCACAGCAGTGCTACCCACCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 90 bp GAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCTGGTTGAAGTaGGACTCCTTTACCACGAAGTTCAGGCAGTGCTCCTTGAGTTGG +
Preference number: 1 (lower is better)
Translates to: EERRSNSFIMITWLK*DSFTTKFRQCSLSW
Trigger: CCAACTCAAGGAGCACTGCCTGAACTTCGTGGTAAAGGAGTCCCACTTCAACCAGGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 90 bp ATCAGTGGAGAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCTaGTTGAAGTGGGACTCCTTTACCACGAAGTTCAGGCAGTGCTCC +
Preference number: 1 (lower is better)
Translates to: ISGEERRSNSFIMIT*LKWDSFTTKFRQCS
Trigger: GGAGCACTGCCTGAACTTCGTGGTAAAGGAGTCCCACTTCAACCAGGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTCTCCACTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 90 bp ATTCAGAAGGATTCGAGGGAACTGACCGTCCTCCCTCCACCCCACTaGCCAGAGTACTCACGTCTTGTCCTTGAATTCAAACTGGAAGAG +
Preference number: 1 (lower is better)
Translates to: IQKDSRELTVLPPPH*PEYSRLVLEFKLEE
Trigger: CTCTTCCAGTTTGAATTCAAGGACAAGACGTGAGTACTCTGGCCAGTGGGGTGGAGGGAGGACGGTCAGTTCCCTCGAATCCTTCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR TCA 90 bp CCATTATTTGAGATCTATGCAGGCCACGTCTGTTACTGGTGGCACTaGCCAAGCTATTCACGAGGAAGGGGACGTCCTTCACGTTCAGAG +
Preference number: 1 (lower is better)
Translates to: PLFEIYAGHVCYWWH*PSYSRGRGRPSRSE
Trigger: CTCTGAACGTGAAGGACGTCCCCTTCCTCGTGAATAGCTTGGTCAGTGCCACCAGTAACAGACGTGGCCTGCATAGATCTCAAATAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR GCA 90 bp TTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTTaGCCAGAGAATACAAACATCTTGTCCCGGCACACAGCCACGGGG +
Preference number: 1 (lower is better)
Translates to: LNSNWKRLLVILAPL*PENTNILSRHTATG
Trigger: CCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CCACGCCGGGGGCCTCCCTGGGAACTGGGGCGGCCTCCTGCTCCAGCTTCTGGGAGCTCCGAGGCAGGCTaGGTGGGCTGCTTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: PRRGPPWELGRPPAPASGSSEAG*VGCLAE
Trigger: CTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGCT...CCCAGAAGCTGGAGCAGGAGGCCGCCCCAGTTCCCAGGGAGGCCCCCGGCGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp CAGGGTGGGCACCTCCTCGGAAGCACAGGCTCGCTCGGGCACTTCAGCCCCACCCGTGGCCCCATGGGCTaGCCTAGCGACTGGCAACCG +
Preference number: 2 (lower is better)
Translates to: QGGHLLGSTGSLGHFSPTRGPMG*PSDWQP
Trigger: CGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACG...GGTGGGGCTGAAGTGCCCGAGCGAGCCTGTGCTTCCGAGGAGGTGCCCACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp CAGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGAGGATTCGAGGGAACTaGCCGTCCTCCCTCCACCCC +
Preference number: 2 (lower is better)
Translates to: QQPRGRASHWAAPRQAGWRIRGN*PSSLHP
Trigger: GGGGTGGAGGGAGGACGGTCAGTTCCCTCGAATCCT...CCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CCA 90 bp TCACAATGGGCAGGCGCCACAGGGCCTCAGATGTCGGCGCCCAGCTCTGCGCACGCCAGGATAGCCTTGTaGGCTGGCCGTGGGTGCCCG +
Preference number: 2 (lower is better)
Translates to: SQWAGATGPQMSAPSSAHARIAL*AGRGCP
Trigger: CGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC...GTGCGCAGAGCTGGGCGCCGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp GACAGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTCTGTCGGAGCTGGGCTaGACGACCTCCCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: DSSRVEEPPTGQLRGRLGLSELG*TTSQVW
Trigger: CCAGACCTGGGAGGTCGTCCAGCCCAGCTCCGACAG...ACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CAGGCTCGCTCGGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGGCTGTAGCCATATCCTaGGGACCTGCCAGGGGCACC +
Preference number: 2 (lower is better)
Translates to: QARSGTSAPPTSLSELGWAVAIS*GPARGT
Trigger: GGTGCCCCTGGCAGGTCCCCAGGATATGGCTACAGC...CCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCCGAGCGAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CCA 90 bp AGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCTGCCTCATAGGTCAGGGTaGGCACCTCCTCGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: SRVEEPPTGQLRGRLGGLPHRSG*APPRKH
Trigger: GTGCTTCCGAGGAGGTGCCCACCCTGACCTATGAGG...CAGCCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR-3UTR TCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCAGGCTCTGGGCACCCTaGCCCTTGGCCTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSRLWAP*PLAWQV
Trigger: CACCTGCCAGGCCAAGGGTCAGGGTGCCCAGAGCCT...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp TCACAATGGGCAGGCGCCACAGGGCCTCAGATGTCGGCGCCCAGCTCTGCGCACCTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAG +
Preference number: 2 (lower is better)
Translates to: SQWAGATGPQMSAPSSAHLVGWP*VPVKQQ
Trigger: CTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAG...GTGCGCAGAGCTGGGCGCCGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCGGGCACCCTGACCCTTaGCCTGGCAGGTGCACCCAC +
Preference number: 2 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSGHPDP*PGRCTH
Trigger: GTGGGTGCACCTGCCAGGCCAAGGGTCAGGGTGCCC...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR GCA 90 bp AGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCTGCGTTTTGTCAGCTaGCTCCAGGATCTGCAGCAC +
Preference number: 2 (lower is better)
Translates to: SSRVEEPPTGQLRGRLGGLRFVS*LQDLQH
Trigger: GTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAG...CCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp CCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCTGGGCACCCCTCCAGGCCCACTaGATGGCCTCTGGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: PRRSRCSAAWTRRPACWAPLQAH*MASGAC
Trigger: GCAGGCACCAGAGGCCATGCAGTGGGCCTGGAGGGG...TGCCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415354.6
3UTR-3UTR CCA 90 bp CCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGCTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAG +
Preference number: 2 (lower is better)
Translates to: PAAAAGSATAGWATWRPWLVGWP*VPVKQQ
Trigger: CTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAG...CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CAGGGTGGGCACCTCCTCGGAAGCACAGGCTCGCTCGGGCACTTCAGCCCCACCCTCCCTCCACCCCACTaGCCAGAGTACTCACGTCTT +
Preference number: 2 (lower is better)
Translates to: QGGHLLGSTGSLGHFSPTLPPPH*PEYSRL
Trigger: AAGACGTGAGTACTCTGGCCAGTGGGGTGGAGGGAG...GGTGGGGCTGAAGTGCCCGAGCGAGCCTGTGCTTCCGAGGAGGTGCCCACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CCA 90 bp GAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGCTCACACTCGCAGGGATCAAGGGCTaGCCAGCAGCCAGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: EPRSRCSVGMRVHLQLTLAGIKG*PAARGS
Trigger: GCTGCCCCTGGCTGCTGGCCAGCCCTTGATCCCTGC...GAGTGTGAGCTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR CAA 90 bp AAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCTGCTaGGCTGAGGTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGAC +
Preference number: 2 (lower is better)
Translates to: KSLPLGSSEAGWVGC*AEVVPKSRPNTSRD
Trigger: GTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR-3UTR TCA 90 bp GGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGACAGGCCCCAGTGCCTaGGTCCACAACACGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GTLLASSRPSPDMHTGGLTGPSA*VHNTPR
Trigger: CCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGT...CAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR TCA 90 bp TGGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGCGGCTCCGCGCTGTaGCAATGGCTACGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: WLPALEWIHMGPSLGQEGSGSAL*QWLRGP
Trigger: AGGGCCACGTAGCCATTGTCACAGCGCGGAGCCGCT...GCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp CTTCACAATGGGCAGGCGCCACAGGGCCTCAGATGTCGGCGCCCAGCTCTGCGCTCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGT +
Preference number: 2 (lower is better)
Translates to: LHNGQAPQGLRCRRPALRSPGSA*STPAAG
Trigger: ACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGA...GCGCAGAGCTGGGCGCCGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp CAGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGTTCATGTCCAGTGCCTaGGTTTTGTCAGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: QQPRGRASHWAAPRQAGWFMSSA*VLSAAS
Trigger: GGAGGCAGCTGACAAAACGCAGGCACTGGACATGAA...CCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CCA 90 bp AAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGTGTGAAAACCAGGCCTaGCCCAGCACGACCGACCTG +
Preference number: 2 (lower is better)
Translates to: KPWAAQGAEASSGGRASKCENQA*PSTTDL
Trigger: CAGGTCGGTCGTGCTGGGCCAGGCCTGGTTTTCACA...CTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp GCCCAGGCAGATTCGCTGGTGCAGCGCAAGTCTGCTAAGCCTCCTCCCGCATGTCACGGGGGACTTTGCTaGCTTCTTCCCGGCCGAGCC +
Preference number: 2 (lower is better)
Translates to: AQADSLVQRKSAKPPPACHGGLC*LLPGRA
Trigger: GGCTCGGCCGGGAAGAAGCCAGCAAAGTCCCCCGTG...ACATGCGGGAGGAGGCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp GAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGCTCACACTCCAGCCAGGGGCAGCATaGGCCAGACCTCTCAGGACC +
Preference number: 2 (lower is better)
Translates to: EPRSRCSVGMRVHLQLTLQPGAA*ARPLRT
Trigger: GGTCCTGAGAGGTCTGGCCCATGCTGCCCCTGGCTG...GAGTGTGAGCTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR TCA 90 bp CTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGTGTGGGCCCATCTTCGGGCATaGAGGACCGGAACATGGCTT +
Preference number: 2 (lower is better)
Translates to: LLKGLKPAVVAGPARCVWAHLRA*RTGTWL
Trigger: AAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGC...CCACACACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR TCA 90 bp ATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGACCGACCTGGGAGCTaGCCTCAGGGCCCTTCACTC +
Preference number: 2 (lower is better)
Translates to: IWGSAKPWAAQGAEASSGDRPGS*PQGPSL
Trigger: GAGTGAAGGGCCCTGAGGTCAGCTCCCAGGTCGGTC...ACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR GCA 90 bp TGGAGGAGCCTTGGTGACAGGCCCCAGTGCCTGAGTCCACAACACGCCCAGGCCCCCAGCTCTGCGCACTaGTTGTCTGAGATGTGGGAG +
Preference number: 2 (lower is better)
Translates to: WRSLGDRPQCLSPQHAQAPSSAH*LSEMWE
Trigger: CTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGG...GGCCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACCAAGGCTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR GCA 90 bp CCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGCCCTGGTGACAGGCCCCAGTaGCTGAGTCCACAACACGCC +
Preference number: 2 (lower is better)
Translates to: PALEWIHMGPSLGQEGSPGDRPQ*LSPQHA
Trigger: GGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACC...AGGGCTGCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR GCA 90 bp TCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACACTGGGCGCTGCAGCCTaGACTCCACTTCCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: SVGRAGRHGDSSQWAGATLGAAA*TPLPGA
Trigger: AGCACCTGGAAGTGGAGTGCAGGCTGCAGCGCCCAG...TGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR-3UTR GCA 90 bp AGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGACCATGGCCACCAGGTaGAAGAGGCGTTCTTCATAT +
Preference number: 2 (lower is better)
Translates to: SSRVEEPPTGQLRGRLGGTMATR*KRRSSY
Trigger: ATATGAAGAACGCCTCTTGCACCTGGTGGCCATGGT...CCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CCA 90 bp CCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCCCATCACTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAG +
Preference number: 2 (lower is better)
Translates to: PLGGRPKVSPHFWVVSPSLVGWP*VPVKQQ
Trigger: CTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAG...TGATGGGCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR CCA 90 bp AGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAAGCCAGGATAGCCTTGTaGGCTGGCCGTGGGTGCCCG +
Preference number: 2 (lower is better)
Translates to: SLVGWPWVPVKQQSDVTEARIAL*AGRGCP
Trigger: CGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC...TTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp AGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGGAGACCTTGGTGAACTaGTGCACAATGATGTGCAGG +
Preference number: 2 (lower is better)
Translates to: SSRVEEPPTGQLRGRLGGETLVN*CTMMCR
Trigger: CCTGCACATCATTGTGCACCAGTTCACCAAGGTCTC...CCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp AAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTCGTGGCCCCATGGGCTaGCCTAGCGACTGGCAACCG +
Preference number: 2 (lower is better)
Translates to: KIHSLSLYTVAPWADLATRGPMG*PSDWQP
Trigger: CGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACG...AGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR-3UTR TCA 90 bp CACACACCTGCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCCTCCTCCCAGCAGGTaGGCTCTCGGTCCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: HTPAYTQRRAGHFPKELWPPPSR*ALGPGG
Trigger: GCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGG...CCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGCAGGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp CCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGTGGGCTGGCCGTGGGTaGCCGTCAAGCAACAGAGTG +
Preference number: 2 (lower is better)
Translates to: PTAIGMRIAGSLLSRQGRWAGRG*PSSNRV
Trigger: CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA...CCTGCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp TCGGCGCCCAGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTTCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGT +
Preference number: 2 (lower is better)
Translates to: SAPSSAHCLSEMWEARESSPGSA*STPAAG
Trigger: ACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGA...AGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp CCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGCTGCGTTTTGTCAGCTaGCTCCAGGATCTGCAGCAC +
Preference number: 2 (lower is better)
Translates to: PAAAAGSATAGWATWRPWLRFVS*LQDLQH
Trigger: GTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAG...CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp CCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGATGTCCAGCAGCAGCTaGTGGCTCAGCGACCGCAGG +
Preference number: 2 (lower is better)
Translates to: PTAIGMRIAGSLLSRQGRMSSSS*WLSDRR
Trigger: CCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACAT...CCTGCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp GGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGCCTTGGCCTGGCAGGTaGACCCACTGCCATAGGCAT +
Preference number: 2 (lower is better)
Translates to: GTLLASSRPSPDMHTGGLPWPGR*THCHRH
Trigger: ATGCCTATGGCAGTGGGTGCACCTGCCAGGCCAAGG...CAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR GCA 90 bp GCGGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGGCCTCTGGTGCCTaGAGACATCACCAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: AARIALWAGRGCPSSNRVMASGA*RHHQEP
Trigger: TGGCTCTTGGTGATGTCTGCAGGCACCAGAGGCCAT...CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415354.6
3UTR-3UTR GCA 90 bp GGGCTGGACGACCTCCCAGGTCTGGAAGTCCACGTCATAGCAGTGCAGCTCGTTCTCCTGCAGCCCCATTaGAGGGATCAAGGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: GLDDLPGLEVHVIAVQLVLLQPH*RDQGLA
Trigger: GGCCAGCCCTTGATCCCTGCAATGGGGCTGCAGGAG...AACGAGCTGCACTGCTATGACGTGGACTTCCAGACCTGGGAGGTCGTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CCA 90 bp CTGCCCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTCCAGCAGCAGCTGCTaGCTCAGCGACCGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: LPCGCGRSHILWKLGRWVSSSSC*LSDRRV
Trigger: CACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGA...CACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
3UTR-3UTR CCA 90 bp CCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGGGGCACCCTGACCCTTaGCCTGGCAGGTGCACCCAC +
Preference number: 2 (lower is better)
Translates to: PVGVAGATSCGNWVDGCVGHPDP*PGRCTH
Trigger: GTGGGTGCACCTGCCAGGCCAAGGGTCAGGGTGCCC...CACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR-3UTR CCA 90 bp TGGAGGAGCCTTGGTGACAGGCCCCAGTGCCTGAGTCCACAACACGCCCAGGCCAGCAGGGTTGCAGACTaGTTCAAGGAGGCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: WRSLGDRPQCLSPQHAQASRVAD*FKEASG
Trigger: CCCAGAAGCCTCCTTGAACCAGTCTGCAACCCTGCT...GGCCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACCAAGGCTCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646124.2
3UTR-3UTR GCA 90 bp AGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATGGGCTGGCCGTGGGTaGCCGTCAAGCAACAGAGTG +
Preference number: 2 (lower is better)
Translates to: SLVGWPWVPVKQQSDVTEWAGRG*PSSNRV
Trigger: CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA...TTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp ATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTATGGACTCGAAGGCCTaGCTGCTGGGCACCATCTCC +
Preference number: 2 (lower is better)
Translates to: IWGSAKPWAAQGAEASSGMDSKA*LLGTIS
Trigger: GGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCAT...ACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR GCA 90 bp CTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGTGTGGTTCATCTCCAGGTTCTaGTTGCAGTACGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: LLKGLKPAVVAGPARCVWFISRF*LQYACS
Trigger: GCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAA...CCACACACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR GCA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCACCTTGGTGAACTGGTaGACAATGATGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: RQGRQARRFFTMGRRHRATLVNW*TMMCRQ
Trigger: CTGCCTGCACATCATTGTGCACCAGTTCACCAAGGT...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp CAGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCCCCTCTGGTCTTCTaGCATTATTTGAGATCTATG +
Preference number: 2 (lower is better)
Translates to: QQPRGRASHWAAPRQAGWAPLVF*HYLRSM
Trigger: CATAGATCTCAAATAATGGCAGAAGACCAGAGGGGC...CCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CCA 90 bp GTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCGCCAGGATAGCCTTGTaGGCTGGCCGTGGGTGCCCG +
Preference number: 2 (lower is better)
Translates to: VHNDVQAVPLHVQCLRFVARIAL*AGRGCP
Trigger: CGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC...GACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp GACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGGGGCACCCTGACCCTTaGCCTGGCAGGTGCACCCAC +
Preference number: 2 (lower is better)
Translates to: DLGELVHNDVQAVPLHVQGHPDP*PGRCTH
Trigger: GTGGGTGCACCTGCCAGGCCAAGGGTCAGGGTGCCC...CTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGCCCTGTCTCTCCCCACTTCTaGGTGGTGAGCCCATCACTG +
Preference number: 2 (lower is better)
Translates to: PALEWIHMGPSLGQEGSPVSPHF*VVSPSL
Trigger: CAGTGATGGGCTCACCACCCAGAAGTGGGGAGAGAC...AGGGCTGCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp TGGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCGTCTCTCCCCACTTCTaGGTGGTGAGCCCATCACTG +
Preference number: 2 (lower is better)
Translates to: WLPALEWIHMGPSLGQEGVSPHF*VVSPSL
Trigger: CAGTGATGGGCTCACCACCCAGAAGTGGGGAGAGAC...GCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp CTGCCCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGCAGGCCAAGCCCCACTaGGTGGGAGGCCCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: LPCGCGRSHILWKLGRWVQAKPH*VGGPKS
Trigger: AGACTTTGGGCCTCCCACCCAGTGGGGCTTGGCCTG...CACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR-3UTR CCA 90 bp AGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCACCCAGGCAGATTCGCTaGTGCAGCGCAAGTCTGCTA +
Preference number: 2 (lower is better)
Translates to: SECTWPTWLGAAACTPLPPRQIR*CSASLL
Trigger: TAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGG...TGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR-3UTR CCA 90 bp TTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCCTCCCAGCACTAGAGTaGATCCACATGGGGCCCTCA +
Preference number: 2 (lower is better)
Translates to: LLASSRPSPDMHTGGLGSLPALE*IHMGPS
Trigger: TGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAG...GGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp GTGGTGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGCCAGAGCTCACAAGGATaGTTACCATGGCCACCAGGT +
Preference number: 2 (lower is better)
Translates to: VVGSPGAGVQLGCVSTCSQSSQG*LPWPPG
Trigger: ACCTGGTGGCCATGGTAACCATCCTTGTGAGCTCTG...GCTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR TCA 90 bp CTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATAGGCCAGGGAGTCTATaGTGTCCAGCAGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: LCWLLPGRALTCTQVDWDRPGSL*CPAAAA
Trigger: AGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCT...ATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR TCA 90 bp TCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTTTGGGGCCCCACGACCGACCTGGGAGCTaGCCTCAGGGCCCTTCACTC +
Preference number: 2 (lower is better)
Translates to: SAPCGTCVFSELMSLGPHDRPGS*PQGPSL
Trigger: GAGTGAAGGGCCCTGAGGTCAGCTCCCAGGTCGGTC...GTGGGGCCCCAAACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR TCA 90 bp GAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTACCGCAGGAGGTCATTaGGCATGGTCTTCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: EGDDRRGSASSSAPCGTCTAGGH*AWSSWS
Trigger: GGACCAGGAAGACCATGCTCAATGACCTCCTGCGGT...ACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp GTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACTTCTTGAAGCCAACCCGCCATATCCTGGGGACCTaGCAGGGGCACCGCACATCC +
Preference number: 2 (lower is better)
Translates to: VVPKSRPNTSRDFLKPTRHILGT*QGHRTS
Trigger: GGATGTGCGGTGCCCCTGGCAGGTCCCCAGGATATG...GCGGGTTGGCTTCAAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CCA 90 bp GCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGGAAGATGTAGCGCAGCATaGACTCGAAGGCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: AGSAASCPVPAFCQLPPGRCSAA*TRRPAC
Trigger: GCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCT...TCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp GATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCTCAGCGACCGCAGGGTaGGCAACTTGGAGACCTTGG +
Preference number: 2 (lower is better)
Translates to: DDRRGSASSSAPCGTCVFSATAG*ATWRPW
Trigger: CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGA...GAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR CCA 90 bp ACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTCTCTCCCCACTTCTaGGTGGTGAGCCCATCACTG +
Preference number: 2 (lower is better)
Translates to: TSGGLLSHGLLKGLKPAVVSPHF*VVSPSL
Trigger: CAGTGATGGGCTCACCACCCAGAAGTGGGGAGAGAC...CACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp AGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTATGATGTCCCAGGCCAAGCCCCACTaGGTGGGAGGCCCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: SSAHCLSEMWEARESMMSQAKPH*VGGPKS
Trigger: AGACTTTGGGCCTCCCACCCAGTGGGGCTTGGCCTG...GGACATCATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR CCA 90 bp TCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACACCACTGACCTACATCTaGGGGTCTGCTAAGCCATGG +
Preference number: 2 (lower is better)
Translates to: SVGRAGRHGDSSQWAGATPLTYI*GSAKPW
Trigger: CCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGG...TGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp CACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGTACACCGTGGCCCCATaGGCTGACCTAGCGACTGGC +
Preference number: 2 (lower is better)
Translates to: HFPKELWLHGSHNKKGVLYTVAP*ADLATG
Trigger: GCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTA...CAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp GGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGTCAAGCAACAGAGTaGTGTCACAGAATTCCGCGC +
Preference number: 2 (lower is better)
Translates to: GWPWVPVKQQSDVTEFRARQATE*CHRIPR
Trigger: GCGCGGAATTCTGTGACATCACTCTGTTGCTTGACG...GGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
3UTR-3UTR TCA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCTGTGTGGCCCCACTCTaGGTGAATGCACCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVCVAPL*VNAPGP
Trigger: TGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACA...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR-3UTR TCA 90 bp CCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTCGTGGCCCCATGGGCTaGCCTAGCGACTGGCAACCG +
Preference number: 2 (lower is better)
Translates to: PHVIQPGVAVIASKDPQLRGPMG*PSDWQP
Trigger: CGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACG...AAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp GTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACTTCTTGAAGCCAACCCGCCCTTGGCCTGGCAGGTaGACCCACTGCCATAGGCAT +
Preference number: 2 (lower is better)
Translates to: VVPKSRPNTSRDFLKPTRPWPGR*THCHRH
Trigger: ATGCCTATGGCAGTGGGTGCACCTGCCAGGCCAAGG...GCGGGTTGGCTTCAAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp GGTGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCCATTCAACCTGGCGTTaGCGTCATAGCCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: GGEPRSRCSVGMRVHVLSHSTWR*RHSQQR
Trigger: TCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATG...GGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp TCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGGATAGCCTTGTGGGCTaGCCGTGGGTGCCCGTCAAG +
Preference number: 2 (lower is better)
Translates to: SAARSAPSRSSPGSACSTDSLVG*PWVPVK
Trigger: CTTGACGGGCACCCACGGCCAGCCCACAAGGCTATC...CGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp GCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTTCAGCGACCGCAGGGTaGGCAACTTGGAGACCTTGG +
Preference number: 2 (lower is better)
Translates to: AARSAPSRSSPGSACSTPSATAG*ATWRPW
Trigger: CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGA...AGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCTGGCTCCCAGGCGATTCTTCACAATaGGCAGGCGCCACAGGGCCT +
Preference number: 2 (lower is better)
Translates to: QQERGPGILFPVRERWLPGDSSQ*AGATGP
Trigger: AGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCC...TGGGAGCCAGCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR CCA 90 bp ATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTCCACTGACCTACATCTaGGGGTCTGCTAAGCCATGG +
Preference number: 2 (lower is better)
Translates to: IWGSAKPWAAQGAEASSGPLTYI*GSAKPW
Trigger: CCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGG...ACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp GCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTCCAGTAAGGGAGCGCTaGCTCCCAGCACTAGAGTGG +
Preference number: 2 (lower is better)
Translates to: AARSAPSRSSPGSACSTPPVRER*LPALEW
Trigger: CCACTCTAGTGCTGGGAGCCAGCGCTCCCTTACTGG...AGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR CCA 90 bp GTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGTTGCAGCAAGATaGGGGGATCTCGCCACTCTG +
Preference number: 2 (lower is better)
Translates to: VLGRHVDLAVVDVAQHGLEVAAR*GDLATL
Trigger: CAGAGTGGCGAGATCCCCCCATCTTGCTGCAACTTC...GAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp TCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGT +
Preference number: 2 (lower is better)
Translates to: SAARSAPSRSSPGSACSTPRAAC*PRRSRC
Trigger: ACATCTACTACGGCGAGGTCAACATGCCGCCCGAGG...CGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR TCA 90 bp GTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACTTCTTGAAGCCAACCCGCAGGCCAGGGAGTCTATaGTGTCCAGCAGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: VVPKSRPNTSRDFLKPTRRPGSL*CPAAAA
Trigger: AGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCT...GCGGGTTGGCTTCAAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp CAGTGCCAGTTTGTACACATCCATGATGAGCAGCACATCCTCCACATGGCCTTTAGGCTCTGGGCACCCTaGCCCTTGGCCTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: QCQFVHIHDEQHILHMAFRLWAP*PLAWQV
Trigger: CACCTGCCAGGCCAAGGGTCAGGGTGCCCAGAGCCT...AAAGGCCATGTGGAGGATGTGCTGCTCATCATGGATGTGTACAAACTGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp AGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCATCACCTCAAGTCAGGTaGGACCCATACATCATGGGT +
Preference number: 2 (lower is better)
Translates to: SECTWPTWLGAAACTPLPSPQVR*DPYIMG
Trigger: ACCCATGATGTATGGGTCTCACCTGACTTGAGGTGA...TGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR-3UTR TCA 90 bp GCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGTTCCCGGCCGAGCCCTaGCATGCACACAGGTGGACT +
Preference number: 2 (lower is better)
Translates to: ASWQPQQERGPGILFPVRFPAEP*HAHRWT
Trigger: AGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAA...CCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR TCA 90 bp TTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCATGGAGGCTTGTCTGTaGCAGAATACTCAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: LLASSRPSPDMHTGGLGSMEACL*QNTQQG
Trigger: CCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCAT...GGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR TCA 90 bp GGTGGTGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGTCTTCTGCCATTATTTaGGATCTATGCAGGCCACGT +
Preference number: 2 (lower is better)
Translates to: GGGEPRSRCSVGMRVHLQSSAII*DLCRPR
Trigger: ACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGA...CTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR GCA 90 bp ATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGA +
Preference number: 2 (lower is better)
Translates to: ICSTFCTVTFISRFCLQYTRRPA*WAPSPR
Trigger: TCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGT...GTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp TGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGATGGACTCGAAGGCCTaGCTGCTGGGCACCATCTCC +
Preference number: 2 (lower is better)
Translates to: WCTMMCRQCRFMSSACVLMDSKA*LLGTIS
Trigger: GGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCAT...CAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp CCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGTGGTGCACAATGATGTaGAGGCAGTGCCGCTTCATG +
Preference number: 2 (lower is better)
Translates to: PTAIGMRIAGSLLSRQGRWCTMM*RQCRFM
Trigger: CATGAAGCGGCACTGCCTGCACATCATTGTGCACCA...CCTGCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp GGCCACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTGGAGGCCAATTGTCCACATCATTCAACCTGGCGTTaGCGTCATAGCCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: GHLLPAGELSVLEANCPHHSTWR*RHSQQR
Trigger: TCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATG...ATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp GAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGGATAGCCTTGTGGGCTaGCCGTGGGTGCCCGTCAAG +
Preference number: 2 (lower is better)
Translates to: EMFTCPSSGMKDRNMASKDSLVG*PWVPVK
Trigger: CTTGACGGGCACCCACGGCCAGCCCACAAGGCTATC...CTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp TGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCCCCATCACTGAGCCGTaGCCTCGCATCCACACTACA +
Preference number: 2 (lower is better)
Translates to: WQPQQERGPGILFPVRERPITEP*PRIHTT
Trigger: TGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGG...GCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp GCCCAGGCAGATTCGCTGGTGCAGCGCAAGTCTGCTAAGCCTCCTCCCGCATGTGAGACCCATACATCATaGGTCCCCACTCACAAGTTC +
Preference number: 2 (lower is better)
Translates to: AQADSLVQRKSAKPPPACETHTS*VPTHKF
Trigger: GAACTTGTGAGTGGGGACCCATGATGTATGGGTCTC...ACATGCGGGAGGAGGCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp GACAATGGCTACGTGGCCCTGCACGCACTCCTCCTTCTCACCCAGCACGAACTCGAGCAGGTGTTCAGTTaGGATGCGTGTCCACGTCTT +
Preference number: 2 (lower is better)
Translates to: DNGYVALHALLLLTQHELEQVFS*DACPRL
Trigger: AAGACGTGGACACGCATCCCAACTGAACACCTGCTC...GAGTTCGTGCTGGGTGAGAAGGAGGAGTGCGTGCAGGGCCACGTAGCCATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CAA 90 bp CGGCACAGCTGCTCCAGGCGGCACAACTGGAAGCTCAGTGCCAGTTaGTACACATCCATGATGAGCAGCACATCCTCCACATGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: RHSCSRRHNWKLSAS*YTSMMSSTSSTWPF
Trigger: GAAAGGCCATGTGGAGGATGTGCTGCTCATCATGGATGTGTACAAACTGGCACTGAGCTTCCAGTTGTGCCGCCTGGAGCAGCTGTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp CCCAGGTCTGGAAGTCCACGTCATAGCAGTGCAGCTCGTTGGGCAGCGTGTTGTCGTCAAGCAACAGAGTaGTGTCACAGAATTCCGCGC +
Preference number: 2 (lower is better)
Translates to: PRSGSPRHSSAARWAACCRQATE*CHRIPR
Trigger: GCGCGGAATTCTGTGACATCACTCTGTTGCTTGACG...ACAACACGCTGCCCAACGAGCTGCACTGCTATGACGTGGACTTCCAGACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp CTCGTTGGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCCTCACGTCTTGTCCTTaGATTCAAACTGGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: LVGQRVVGRTPKHIEVAVLTSCP*IQTGRG
Trigger: ACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGAG...GACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCCAACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR GCA 90 bp CCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATCGCTCCCTCCAGGTATaGCTTCATGTCCTGGATCAG +
Preference number: 2 (lower is better)
Translates to: PSSNRVMSQNSAPAPSRYRSLQV*LHVLDQ
Trigger: CTGATCCAGGACATGAAGGCATACCTGGAGGGAGCG...ATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp TGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCCGCTCCCTCCAGGTATaGCTTCATGTCCTGGATCAG +
Preference number: 2 (lower is better)
Translates to: WQPQQERGPGILFPVRERRSLQV*LHVLDQ
Trigger: CTGATCCAGGACATGAAGGCATACCTGGAGGGAGCG...GCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR GCA 90 bp TGCCAGTTTGTACACATCCATGATGAGCAGCACATCCTCCACATGGCCTTTCCGACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGA +
Preference number: 2 (lower is better)
Translates to: CQFVHIHDEQHILHMAFPTRRPA*WAPSPR
Trigger: TCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGT...CGGAAAGGCCATGTGGAGGATGTGCTGCTCATCATGGATGTGTACAAACTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp GTGGGCAACTTGGAGACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCTCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGT +
Preference number: 2 (lower is better)
Translates to: VGNLETLVNWCTMMCRQCSPGSA*STPAAG
Trigger: ACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGA...GCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp CAGGTAAGGCCACTGACCTACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAACCGCTTCATGTCCAGTaGCTGCGTTTTGTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: QVRPLTYIWGSAKPWAAQPLHVQ*LRFVSC
Trigger: GCAGCTGACAAAACGCAGGCACTGGACATGAAGCGG...TTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGGCCTTACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR GCA 90 bp GTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACTTCTTGAAGCCAACCCGCATGATGTGCAGGCAGTaGCGCTTCATGTCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: VVPKSRPNTSRDFLKPTRMMCRQ*RFMSSA
Trigger: GGCACTGGACATGAAGCGGCACTGCCTGCACATCAT...GCGGGTTGGCTTCAAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp CTGACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATAATGTCCAGCAGCAGCTaGTGGCTCAGCGACCGCAGG +
Preference number: 2 (lower is better)
Translates to: LTSGPFTPKFTSSQVRPIMSSSS*WLSDRR
Trigger: CCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACAT...TATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR GCA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACGGCAGGTGCACCCACTaGCATAGGCATGCGCATAGC +
Preference number: 2 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDGRCTH*HRHAHS
Trigger: GCTATGCGCATGCCTATGGCAGTGGGTGCACCTGCC...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR GCA 90 bp CAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCTGGCTCCCAAGGCAGATTCGCTGGTaGAGCGCAAGTCTGCTAAGC +
Preference number: 2 (lower is better)
Translates to: QQERGPGILFPVRERWLPRQIRW*SASLLS
Trigger: GCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCT...TGGGAGCCAGCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR GCA 90 bp CCCAGCTCATCTTGCACTAGGCCACTTCCTAGCCTGCAGGCTGCCTATGGATCTAGGCAGATTCGCTGGTaGAGCGCAAGTCTGCTAAGC +
Preference number: 2 (lower is better)
Translates to: PSSSCTRPLPSLQAAYGSRQIRW*SASLLS
Trigger: GCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCT...AGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR GCA 90 bp GATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCTGCATGGCCTCTGGTaGCTGCAGACATCACCAAGA +
Preference number: 2 (lower is better)
Translates to: DVTEFRARSLQVCLHVLDLHGLW*LQTSPR
Trigger: TCTTGGTGATGTCTGCAGGCACCAGAGGCCATGCAG...ATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415354.6
3UTR-3UTR CCA 90 bp CATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCACCATCTCCCCGATaGAGATGTTCACCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: HVDLAVVDVAQHGLEGLPAPSPR*RCSPAH
Trigger: ATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGC...AGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp ATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCGCACCATCTCCCCGATaGAGATGTTCACCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: MMCRQCRFMSSACVLSAAAPSPR*RCSPAH
Trigger: ATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGC...GGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CCCAGCTCATCTTGCACTAGGCCACTTCCTAGCCTGCAGGCTGCCTATGGATCTGCAAGGTGTGTGTGGTaGGTAGCACTGCTGTGGCTT +
Preference number: 2 (lower is better)
Translates to: PSSSCTRPLPSLQAAYGSARCVW*VALLWL
Trigger: AAGCCACAGCAGTGCTACCCACCACACACACCTTGC...AGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp ACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGCAGGAGTTGACAGCATaGATAGAGACAGGTAAGGCC +
Preference number: 2 (lower is better)
Translates to: TSGGLLSHGLLKGLKPAVQELTA*IETGKA
Trigger: GGCCTTACCTGTCTCTATCCATGCTGTCAACTCCTG...CACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp CCCAGCTCATCTTGCACTAGGCCACTTCCTAGCCTGCAGGCTGCCTATGGATCTTTCCCCAAGGAGCTGTaGCTTCATGGCAGCCACAAC +
Preference number: 2 (lower is better)
Translates to: PSSSCTRPLPSLQAAYGSFPKEL*LHGSHN
Trigger: GTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAA...AGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp ACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGACGACCTCCCAGGTCACTGGAAGAGGTTGTTaGTTATTTTGGCTCCGCTTT +
Preference number: 2 (lower is better)
Translates to: TSAPPTSLSELGWTTSQVTGRGC*LFWLRF
Trigger: AAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGT...GACCTGGGAGGTCGTCCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp TGGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCTCCACGTCTTGTCCTTaGATTCAAACTGGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: WLPALEWIHMGPSLGQEGSTSCP*IQTGRG
Trigger: ACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGA...GCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp GCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGCCCAGCTCTGCGCACTaGTTGTCTGAGATGTGGGAG +
Preference number: 2 (lower is better)
Translates to: ASWQPQQERGPGILFPVRPSSAH*LSEMWE
Trigger: CTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGG...CCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR GCA 90 bp GCAAAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGCATTCAACCTGGCGTTaGCGTCATAGCCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: AKIHSLSLYTVAPWADLAHSTWR*RHSQQR
Trigger: TCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATG...CGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp ACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATACATAGCCTCTCCCGCGCCTaGGTGATCTTCCTGCGAAGC +
Preference number: 2 (lower is better)
Translates to: TSGPFTPKFTSSQVRPIHSLSRA*VIFLRS
Trigger: GCTTCGCAGGAAGATCACGCAGGCGCGGGAGAGGCT...ATGTATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp ATCTCCACTATCAGTGGAGAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCACAACCAGCACGTTCTaGAGGTCCACGGAGGCCTCG +
Preference number: 2 (lower is better)
Translates to: ISTISGEERRSNSFIMITTTSTF*RSTEAS
Trigger: CGAGGCCTCCGTGGACCTGCAGAACGTGCTGGTTGT...GGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CAA 90 bp CAGACCTCTCAGGACCTGCAGGCCCCTCTGGTCTTCTGCCATTATTaGAGATCTATGCAGGCCACGTCTGTTACTGGTGGCACTGACCAA +
Preference number: 2 (lower is better)
Translates to: QTSQDLQAPLVFCHY*RSMQATSVTGGTDQ
Trigger: TTGGTCAGTGCCACCAGTAACAGACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGGTCCTGAGAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR GCA 90 bp CCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGTATGGAGATGTTCACCTaGCCATCTTCGGGCATGAAG +
Preference number: 2 (lower is better)
Translates to: PSRSSPGSACSTPAAGCCMEMFT*PSSGMK
Trigger: CTTCATGCCCGAAGATGGGCAGGTGAACATCTCCAT...ACAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp GACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTTCATCTCCAGGTTCTaGTTGCAGTACGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: DLGELVHNDVQAVPLHVQFISRF*LQYACS
Trigger: GCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAA...CTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp TCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTTTGGGGCCCCACGTTCCCAGCTCATCTTaGACTAGGCCACTTCCTAGC +
Preference number: 2 (lower is better)
Translates to: SAPCGTCVFSELMSLGPHVPSSS*TRPLPS
Trigger: GCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGGAAC...GTGGGGCCCCAAACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp ACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATACATCCTCCTCCCGCATGTTaGAGGAGCCTTGGTGACAGG +
Preference number: 2 (lower is better)
Translates to: TSGPFTPKFTSSQVRPIHPPPAC*RSLGDR
Trigger: CCTGTCACCAAGGCTCCTCCAACATGCGGGAGGAGG...ATGTATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp GACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGCTCACAAGTTCCAGGTaGGAAGAGGAGCCCCTTACA +
Preference number: 2 (lower is better)
Translates to: DLGELVHNDVQAVPLHVQLTSSR*EEEPLT
Trigger: TGTAAGGGGCTCCTCTTCCCACCTGGAACTTGTGAG...CTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR CCA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCGAGACCCATACATCATaGGTCCCCACTCACAAGTTC +
Preference number: 2 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVETHTS*VPTHKF
Trigger: GAACTTGTGAGTGGGGACCCATGATGTATGGGTCTC...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CCA 90 bp AAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTACATGTCATTCAACCTaGCGTTGCCGTCATAGCCAG +
Preference number: 2 (lower is better)
Translates to: KIHSLSLYTVAPWADLATTCHST*RCRHSQ
Trigger: CTGGCTATGACGGCAACGCCAGGTTGAATGACATGT...AGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR CAA 90 bp AGTGGAGAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCTGGTaGAAGTGGGACTCCTTTACCACGAAGTTCAGGCAGTGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: SGEERRSNSFIMITW*KWDSFTTKFRQCSL
Trigger: CAAGGAGCACTGCCTGAACTTCGTGGTAAAGGAGTCCCACTTCAACCAGGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTCTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR TCA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACCGTCAAGCAACAGAGTaGTGTCACAGAATTCCGCGC +
Preference number: 2 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDRQATE*CHRIPR
Trigger: GCGCGGAATTCTGTGACATCACTCTGTTGCTTGACG...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR GCA 90 bp TCCAGGATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGATGGAGATGTTCACCTaGCCATCTTCGGGCATGAAG +
Preference number: 2 (lower is better)
Translates to: SRICSTFCTVTFISRFCLMEMFT*PSSGMK
Trigger: CTTCATGCCCGAAGATGGGCAGGTGAACATCTCCAT...CAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGATCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp ATCTCCACTATCAGTGGAGAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCAGGCAGATTCGCTGGTaGAGCGCAAGTCTGCTAAGC +
Preference number: 2 (lower is better)
Translates to: ISTISGEERRSNSFIMITRQIRW*SASLLS
Trigger: GCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCT...GGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CCA 90 bp CCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAAGTGAGCTCTCGGTCCTaGAGGCCAATTGTCCACATG +
Preference number: 2 (lower is better)
Translates to: PEQVFSWDACPRLVLEFKVSSRS*RPIVHM
Trigger: CATGTGGACAATTGGCCTCCAGGACCGAGAGCTCAC...TTTGAATTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CTCTCAGGACCTGCAGGCCCCTCTGGTCTTCTGCCATTATTTGAGATCTATGCACAAGGATGGTTACCATaGCCACCAGGTGCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: LSGPAGPSGLLPLFEIYAQGWLP*PPGARG
Trigger: GCCTCTTGCACCTGGTGGCCATGGTAACCATCCTTG...TGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGGTCCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR TCA 90 bp GATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTACGTCAAGCAACAGAGTaGTGTCACAGAATTCCGCGC +
Preference number: 2 (lower is better)
Translates to: DVHLPIFGHEGPEHGFKVRQATE*CHRIPR
Trigger: GCGCGGAATTCTGTGACATCACTCTGTTGCTTGACG...TACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp CTCTCAGGACCTGCAGGCCCCTCTGGTCTTCTGCCATTATTTGAGATCTATGCACGGGCTGTAACCTCCTaGTGTTTGCAGAGCTCACAA +
Preference number: 2 (lower is better)
Translates to: LSGPAGPSGLLPLFEIYARAVTS*CLQSSQ
Trigger: TTGTGAGCTCTGCAAACAGCAGGAGGTTACAGCCCG...TGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGGTCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CCA 90 bp TTCAATTTTCCACTCCGTCCACTGGCCAGTTGCAAACTTGTATTCAAAGAGGTCTACACCGTGGCCCCATaGGCTGACCTAGCGACTGGC +
Preference number: 2 (lower is better)
Translates to: FNFPLRPLASCKLVFKEVYTVAP*ADLATG
Trigger: GCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTA...GACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp TCCAGGATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCGTCCACTGGCCAGTTaGAAACTTGTATTCAAAGAG +
Preference number: 2 (lower is better)
Translates to: SRICSTFCTVTFISRFCLRPLAS*KLVFKE
Trigger: CTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACG...CAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGATCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR GCA 90 bp CAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCTGGCTCCCAATTTTGGCTCCGCTTTaGCCAGAGAATACAAACATC +
Preference number: 2 (lower is better)
Translates to: QQERGPGILFPVRERWLPILAPL*PENTNI
Trigger: GATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAAT...TGGGAGCCAGCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CCA 90 bp CAGCACATCCTCCACATGGCCTTTCCGTGGGTATTTGATCTTGTCGGTGTAGAGGAGACCCATACATCATaGGTCCCCACTCACAAGTTC +
Preference number: 2 (lower is better)
Translates to: QHILHMAFPWVFDLVGVEETHTS*VPTHKF
Trigger: GAACTTGTGAGTGGGGACCCATGATGTATGGGTCTC...CTCTACACCGACAAGATCAAATACCCACGGAAAGGCCATGTGGAGGATGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CCA 90 bp GCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTTACACCGTGGCCCCATaGGCTGACCTAGCGACTGGC +
Preference number: 2 (lower is better)
Translates to: ACPRLVLEFKLEEVVGYFYTVAP*ADLATG
Trigger: GCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTA...AAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAAACATGTCATTCAACCTaGCGTTGCCGTCATAGCCAG +
Preference number: 2 (lower is better)
Translates to: PEQVFSWDACPRLVLEFKTCHST*RCRHSQ
Trigger: CTGGCTATGACGGCAACGCCAGGTTGAATGACATGT...TTTGAATTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR TCA 90 bp ACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATACATTCACCTCAAGTCAGGTaGGACCCATACATCATGGGT +
Preference number: 2 (lower is better)
Translates to: TSGPFTPKFTSSQVRPIHSPQVR*DPYIMG
Trigger: ACCCATGATGTATGGGTCTCACCTGACTTGAGGTGA...ATGTATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR GCA 90 bp GAATACAAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCAGCAAGATGGCGTCCACTGGCCAGTTaGAAACTTGTATTCAAAGAG +
Preference number: 2 (lower is better)
Translates to: EYKHLVPAHSHGEVAARWRPLAS*KLVFKE
Trigger: CTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACG...CCATCTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTTTCCACTCCGTCCACTaGCCAGTTGCAAACTTGTAT +
Preference number: 2 (lower is better)
Translates to: PHVIQPGVAVIASKDPQLFHSVH*PVANLY
Trigger: ATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAA...AAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp CCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAAGGTTGTTGGTTATTTTaGCTCCGCTTTGCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: PEQVFSWDACPRLVLEFKGCWLF*LRFAQR
Trigger: TCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACC...TTTGAATTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR CAA 90 bp CTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTaGCCCAGAGAATACAAACATCTTGTCCCGGCACACAGCCACGGG +
Preference number: 2 (lower is better)
Translates to: LEFKLEEVVGYFGSA*PREYKHLVPAHSHG
Trigger: CCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR GCA 90 bp GTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCGCTCCCTCCAGGTATaGCTTCATGTCCTGGATCAG +
Preference number: 2 (lower is better)
Translates to: VHVLSLNSNWKRLLVILARSLQV*LHVLDQ
Trigger: CTGATCCAGGACATGAAGGCATACCTGGAGGGAGCG...AGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CAA 90 bp CACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTaGGCTCCGCTTTGCCCAGAGAATACAAACATCTTGTCCCGGCAC +
Preference number: 2 (lower is better)
Translates to: HVLSLNSNWKRLLVI*APLCPENTNILSRH
Trigger: GTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR CAA 90 bp GGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTaGTTGGTTATTTTGGCTCCGCTTTGCCCAGAGAATACAAACATC +
Preference number: 2 (lower is better)
Translates to: GMRVHVLSLNSNWKR*LVILAPLCPENTNI
Trigger: GATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CCA 90 bp GTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTTTCCACTCCGTCCACTaGCCAGTTGCAAACTTGTAT +
Preference number: 2 (lower is better)
Translates to: VLSLNSNWKRLLVILAPLFHSVH*PVANLY
Trigger: ATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAA...AAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp CACGCCGGGGGCCTCCCTGGGAACTGGGGCGGCCTCCTGCTCCAGCTTCTGGGCCCGCTGCGGATGTTGTaGTCCACCGTGCCCCCGAAG +
Preference number: 3 (lower is better)
Translates to: HAGGLPGNWGGLLLQLLGPLRML*STVPPK
Trigger: CTTCGGGGGCACGGTGGACAACAACATCCGCAGCGG...GCCCAGAAGCTGGAGCAGGAGGCCGCCCCAGTTCCCAGGGAGGCCCCCGGCGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 72 bp CACCATGGTATGCCCGTAGCGCCGCTGCGGGGGTGGTaGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCG +
Preference number: 3 (lower is better)
Translates to: HHGMPVAPLRGW*GAPEQVFSWDA
Trigger: CGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACCACCCCCGCAGCGGCGCTACGGGCATACCATGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp AAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGGGACACGGGGGACTTaGCTGGCTTCTTCCCGGCCG +
Preference number: 3 (lower is better)
Translates to: KPWAAQGAEASSGGRASKGTRGT*LASSRP
Trigger: CGGCCGGGAAGAAGCCAGCAAAGTCCCCCGTGTCCC...CTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 72 bp GTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATaGGCAGGCGCCACAGGGCCTCAGATGTCGGCGCCC +
Preference number: 3 (lower is better)
Translates to: VGRAGRHGDSSQ*AGATGPQMSAP
Trigger: GGGCGCCGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp ACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGACGACCTCCCAGGTCTCGTTGGGCAGCGTGTaGTCGGCCGCACCCCCAAAC +
Preference number: 3 (lower is better)
Translates to: TSAPPTSLSELGWTTSQVSLGSV*SAAPPN
Trigger: GTTTGGGGGTGCGGCCGACAACACGCTGCCCAACGA...GACCTGGGAGGTCGTCCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR GCA 72 bp CTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCTaGTTGGCTGAGGTGGTGCCAAAGTCCAGGCCAAAC +
Preference number: 3 (lower is better)
Translates to: LPLGSSEAGWVG*LAEVVPKSRPN
Trigger: GTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR CCA 72 bp GTCCCGGCACACAGCCACGGGGAAGTTGCAGCAAGATaGGGGGATCTCGCCACTCTGGGCCACCTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: VPAHSHGEVAAR*GDLATLGHLLP
Trigger: TGGGAGGAGGTGGCCCAGAGTGGCGAGATCCCCCCATCTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR CCA 72 bp CCCCAAACACATAGAGGTGGCGGTCAAAGGCCACCATaGTATGCCCGTAGCGCCGCTGCGGGGGTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: PQTHRGGGQRPP*YARSAAAGVVG
Trigger: CCCCACCACCCCCGCAGCGGCGCTACGGGCATACCATGGTGGCCTTTGACCGCCACCTCTATGTGTTTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR CCA 72 bp CGGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTaGGCTGGACGACCTCCCAGGTCTGGAAGTCCACGT +
Preference number: 3 (lower is better)
Translates to: RALQPHQPRCRS*AGRPPRSGSPR
Trigger: ACGTGGACTTCCAGACCTGGGAGGTCGTCCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR CCA 72 bp CGAAGCCAGCGGCTCCGCGCTGTGACAATGGCTACGTaGCCCTGCACGCACTCCTCCTTCTCACCCAGCACG +
Preference number: 3 (lower is better)
Translates to: RSQRLRAVTMAT*PCTHSSFSPST
Trigger: CGTGCTGGGTGAGAAGGAGGAGTGCGTGCAGGGCCACGTAGCCATTGTCACAGCGCGGAGCCGCTGGCTTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR TCA 72 bp CCACCGTGCCCCCGAAGATGTACATGGCGTCCGAGATaGCAGCAGCCGCGTGGAAGAGCCTCCCACTGGGCA +
Preference number: 3 (lower is better)
Translates to: PPCPRRCTWRPR*QQPRGRASHWA
Trigger: TGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTCATCTCGGACGCCATGTACATCTTCGGGGGCACGGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR GCA 72 bp CTGGGTAGATGGGTGTGTGGCCCCACTCTGAGTGAATaGACCTGGCCCACATGGCTGGGCGCTGCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: LGRWVCGPTLSE*TWPTWLGAAAC
Trigger: GCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACACCCATCTACCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR GCA 72 bp CAGCGGCTCCGCGCTGTGACAATGGCTACGTGGCCCTaGACGCACTCCTCCTTCTCACCCAGCACGAACTCC +
Preference number: 3 (lower is better)
Translates to: QRLRAVTMATWP*THSSFSPSTNS
Trigger: GGAGTTCGTGCTGGGTGAGAAGGAGGAGTGCGTGCAGGGCCACGTAGCCATTGTCACAGCGCGGAGCCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 72 bp GTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTaGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTC +
Preference number: 3 (lower is better)
Translates to: VAGAGGQDSLVG*PWVPVKQQSDV
Trigger: GACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
3UTR CCA 72 bp CCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTaGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCA +
Preference number: 3 (lower is better)
Translates to: PLGGRPKVSPHF*VVSPSLSRGLA
Trigger: TGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 72 bp GGGTGGGTGGGACAGGAGCAGCCCAGGCAGATTCGCTaGTGCAGCGCAAGTCTGCTAAGCCTCCTCCCGCAT +
Preference number: 3 (lower is better)
Translates to: GWVGQEQPRQIR*CSASLLSLLPH
Trigger: ATGCGGGAGGAGGCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGGCTGCTCCTGTCCCACCCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 72 bp GGACTGGGATCCTTCAGCCCCTGTGAAAACCAGGCCTaGCCCAGCACGACCGACCTGGGAGCTGACCTCAGG +
Preference number: 3 (lower is better)
Translates to: GLGSFSPCENQA*PSTTDLGADLR
Trigger: CCTGAGGTCAGCTCCCAGGTCGGTCGTGCTGGGCCAGGCCTGGTTTTCACAGGGGCTGAAGGATCCCAGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR TCA 72 bp TGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTaGTGTCACAGAATTCCGCGCCCGCTCCCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: CGLAVGARQATE*CHRIPRPLPPG
Trigger: ACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
3UTR TCA 72 bp CATGTTGGAGGAGCCTTGGTGACAGGCCCCAGTGCCTaGGTCCACAACACGCCCAGGCCACAGAAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: HVGGALVTGPSA*VHNTPRPQKPG
Trigger: GCCTGGCTTCTGTGGCCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACCAAGGCTCCTCCAACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR TCA 72 bp ACGGGGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTaGCATGCACACAGGTGGACTGGGATCCTTCAGCCC +
Preference number: 3 (lower is better)
Translates to: TGDFAGFFPAEP*HAHRWTGILQP
Trigger: GGGCTGAAGGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR GCA 72 bp TGGGAGGCCAGGGAGTCTATGATGTCCAGCAGCAGCTaGTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAG +
Preference number: 3 (lower is better)
Translates to: WEARESMMSSSS*WLSDRRVGNLE
Trigger: CTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 72 bp TCCACTGGCTGGTCCAAGGGAGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATCTCCACTATCAGTGGA +
Preference number: 3 (lower is better)
Translates to: STGWSKGVRGGG*CFRRTISTISG
Trigger: TCCACTGATAGTGGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCACTCCCTTGGACCAGCCAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 72 bp GAGGCCAGGGAGTCTATGATGTCCAGCAGCAGCTGCTaGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACC +
Preference number: 3 (lower is better)
Translates to: EARESMMSSSSC*LSDRRVGNLET
Trigger: GGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR CCA 72 bp AGATGGGTGTGTGGCCCCACTCTGAGTGAATGCACCTaGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCA +
Preference number: 3 (lower is better)
Translates to: RWVCGPTLSECT*PTWLGAAACTP
Trigger: TGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACACCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR CCA 72 bp AAGATGTACATGGCGTCCGAGATGACAGCAGCCGCGTaGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGC +
Preference number: 3 (lower is better)
Translates to: KMYMASEMTAAA*KSLPLGSSEAG
Trigger: GCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTCATCTCGGACGCCATGTACATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CAA 90 bp CATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCGGCCAGGATAGCCTaGTGGGCTGGCCGTGGGTGC +
Preference number: 3 (lower is better)
Translates to: HVDLAVVDVAQHGLEGLPAARIA*WAGRGC
Trigger: GCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC...AGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp ACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGGCGGCCAGGATAGCCTaGTGGGCTGGCCGTGGGTGC +
Preference number: 3 (lower is better)
Translates to: TVTFISRFCLQYACSRLLAARIA*WAGRGC
Trigger: GCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC...CAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp CTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGTGTGGGGAGCAGGTGTTCAGTaGGGATGCGTGTCCACGTCT +
Preference number: 3 (lower is better)
Translates to: LLKGLKPAVVAGPARCVWGAGVQ*GCVSTS
Trigger: AGACGTGGACACGCATCCCAACTGAACACCTGCTCC...CCACACACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CAA 90 bp TGGAGGAGCCTTGGTGACAGGCCCCAGTGCCTGAGTCCACAACACGCCCAGGCCGCAAAGATCCACAGCTaGTCACTGTACACCGTGGCC +
Preference number: 3 (lower is better)
Translates to: WRSLGDRPQCLSPQHAQAAKIHS*SLYTVA
Trigger: GGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGC...GGCCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACCAAGGCTCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR GCA 72 bp ACAGGGCCTCAGATGTCGGCGCCCAGCTCTGCGCACTaGTTGTCTGAGATGTGGGAGGCCAGGGAGTCTATG +
Preference number: 3 (lower is better)
Translates to: TGPQMSAPSSAH*LSEMWEARESM
Trigger: CATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCGACATCTGAGGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 72 bp GGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATaGACACAGGTGGACTGGGATCCTTCAGCCCCTGTG +
Preference number: 3 (lower is better)
Translates to: GLCWLLPGRALT*TQVDWDPSAPV
Trigger: CACAGGGGCTGAAGGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR GCA 72 bp ACGAAGTTCAGGCAGTGCTCCTTGAGTTGGCTCAGCTaGAGCCGGGCGGCACTCTCGCACACAACCAGCACG +
Preference number: 3 (lower is better)
Translates to: TKFRQCSLSWLS*SRAALSHTTST
Trigger: CGTGCTGGTTGTGTGCGAGAGTGCCGCCCGGCTGCAGCTGAGCCAACTCAAGGAGCACTGCCTGAACTTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 72 bp TCGGCGCCCAGCTCTGCGCACTGCTTGTCTGAGATGTaGGAGGCCAGGGAGTCTATGATGTCCAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: SAPSSAHCLSEM*EARESMMSSSS
Trigger: GCTGCTGCTGGACATCATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR CCA 72 bp AGGCCACTGACCTACATCTGGGGGTCTGCTAAGCCATaGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: RPLTYIWGSAKP*AAQGAEASSGG
Trigger: GCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 72 bp AGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCTaGCTCCCAGCACTAGAGTGGATCCACATGGGGCCC +
Preference number: 3 (lower is better)
Translates to: RGPGILFPVRER*LPALEWIHMGP
Trigger: GGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCAGCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 72 bp ATGATCAAGCCCCCTCCAGGCCCACTGCATGGCCTCTaGTGCCTGCAGACATCACCAAGAGCCAGCAACCGG +
Preference number: 3 (lower is better)
Translates to: MIKPPPGPLHGL*CLQTSPRASNR
Trigger: CCGGTTGCTGGCTCTTGGTGATGTCTGCAGGCACCAGAGGCCATGCAGTGGGCCTGGAGGGGGCTTGATCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415354.6
3UTR-3UTR CAA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACGCGGCCAGGATAGCCTaGTGGGCTGGCCGTGGGTGC +
Preference number: 3 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDAARIA*WAGRGC
Trigger: GCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR TCA 72 bp TGTGGAAACTGGGTAGATGGGTGTGTGGCCCCACTCTaGGTGAATGCACCTGGCCCACATGGCTGGGCGCTG +
Preference number: 3 (lower is better)
Translates to: CGNWVDGCVAPL*VNAPGPHGWAL
Trigger: CAGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACACCCATCTACCCAGTTTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR GCA 72 bp TTGGGATGCGTGTCCACCTGCAGCTCACACTCCTTGTaGCCTCTCCTGCAGCCCCATTGCAGGGATCAAGGG +
Preference number: 3 (lower is better)
Translates to: LGCVSTCSSHSL*PLLQPHCRDQG
Trigger: CCCTTGATCCCTGCAATGGGGCTGCAGGAGAGGGCACAAGGAGTGTGAGCTGCAGGTGGACACGCATCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR CCA 72 bp AGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCTaGGCACCATCTCCCCGATGGAGATGTTCACCTGCC +
Preference number: 3 (lower is better)
Translates to: RCSAAWTRRPAC*APSPRWRCSPA
Trigger: GGCAGGTGAACATCTCCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR CCA 72 bp TCCCCACTTCTGGGTGGTGAGCCCATCACTGAGCCGTaGCCTCGCATCCACACTACACCAGGAGAGGGTGAT +
Preference number: 3 (lower is better)
Translates to: SPLLGGEPITEP*PRIHTTPGEGD
Trigger: ATCACCCTCTCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAGAAGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 72 bp CCTGTGAAAACCAGGCCTGGCCCAGCACGACCGACCTaGGAGCTGACCTCAGGGCCCTTCACTCCAAAATTC +
Preference number: 3 (lower is better)
Translates to: PVKTRPGPARPT*ELTSGPFTPKF
Trigger: GAATTTTGGAGTGAAGGGCCCTGAGGTCAGCTCCCAGGTCGGTCGTGCTGGGCCAGGCCTGGTTTTCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 72 bp TGGGCCACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTaGAGGCCAATTGTCCACATGTCATTCAACCTGGCG +
Preference number: 3 (lower is better)
Translates to: WATSSQQVSSRS*RPIVHMSFNLA
Trigger: CGCCAGGTTGAATGACATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR CCA 72 bp TCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTaGATCAGAGATGTGCCTCATGATCAAGCCCCCTCC +
Preference number: 3 (lower is better)
Translates to: SAPAPSRYAFMS*IRDVPHDQAPS
Trigger: GGAGGGGGCTTGATCATGAGGCACATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415354.6
3UTR CCA 72 bp TCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTaGATCAGAGATGTGCCAATGTCCACTGGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: SAPAPSRYAFMS*IRDVPMSTGWS
Trigger: GGACCAGCCAGTGGACATTGGCACATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CAA 90 bp CCCAGGTCTGGAAGTCCACGTCATAGCAGTGCAGCTCGTTGGGCAGCGTGTTGTCGCAGGGTGGGCAACTaGGAGACCTTGGTGAACTGG +
Preference number: 3 (lower is better)
Translates to: PRSGSPRHSSAARWAACCRRVGN*ETLVNW
Trigger: CCAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCG...ACAACACGCTGCCCAACGAGCTGCACTGCTATGACGTGGACTTCCAGACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR TCA 72 bp TCAGATGTCGGCGCCCAGCTCTGCGCACTGCTTGTCTaGGATGTGGGAGGCCAGGGAGTCTATGATGTCCAG +
Preference number: 3 (lower is better)
Translates to: SDVGAQLCALLV*DVGGQGVYDVQ
Trigger: CTGGACATCATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCGACATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR TCA 72 bp AAACCAGGCCTGGCCCAGCACGACCGACCTGGGAGCTaGCCTCAGGGCCCTTCACTCCAAAATTCACCTCAA +
Preference number: 3 (lower is better)
Translates to: KPGLAQHDRPGS*PQGPSLQNSPQ
Trigger: TTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGTCAGCTCCCAGGTCGGTCGTGCTGGGCCAGGCCTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR TCA 72 bp CTGGAGGCCTTCACAGCCCTTCCCAATGTGACTGGGTaGCCCCAGGTGGAGGCAGGAGTTGACAGCATGGAT +
Preference number: 3 (lower is better)
Translates to: LEAFTALPNVTG*PQVEAGVDSMD
Trigger: ATCCATGCTGTCAACTCCTGCCTCCACCTGGGGTCACCCAGTCACATTGGGAAGGGCTGTGAAGGCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR GCA 72 bp GTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTaGCTCCAGGATCTGCAGCACGTTCTGCACCGTCAC +
Preference number: 3 (lower is better)
Translates to: VPLHVQCLRFVS*LQDLQHVLHRH
Trigger: GTGACGGTGCAGAACGTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 72 bp CTTATCTTGCTAAGCTGTAGCCATATCCTGGGGACCTaGCAGGGGCACCGCACATCCCTGCTCCGGGCTGTA +
Preference number: 3 (lower is better)
Translates to: LILLSCSHILGT*QGHRTSLLRAV
Trigger: TACAGCCCGGAGCAGGGATGTGCGGTGCCCCTGGCAGGTCCCCAGGATATGGCTACAGCTTAGCAAGATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CAA 90 bp GGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGCTCGCCAGGCCTTATCTaGCTAAGCTGTAGCCATATC +
Preference number: 3 (lower is better)
Translates to: GQRVVGRTPKHIEVAVKGSPGLI*LSCSHI
Trigger: GATATGGCTACAGCTTAGCAAGATAAGGCCTGGCGA...GCCTTTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CAA 90 bp CCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGGGCAACTTGGAGACCTaGGTGAACTGGTGCACAATG +
Preference number: 3 (lower is better)
Translates to: PTAIGMRIAGSLLSRQGRGNLET*VNWCTM
Trigger: CATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCC...CCTGCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp GGTGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCCCGTCCACTGGCCAGTaGCAAACTTGTATTCAAAGA +
Preference number: 3 (lower is better)
Translates to: GGEPRSRCSVGMRVHVLSPSTGQ*QTCIQR
Trigger: TCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGG...GGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR TCA 72 bp CCGCAAACAAGTAGAGCGAGTCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGTAGCGCAGCATGGACT +
Preference number: 3 (lower is better)
Translates to: PQTSRASPRAAC*PRRSRCSAAWT
Trigger: AGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTACTTGTTTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR GCA 72 bp AGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGATGGAGATGTTCACCT +
Preference number: 3 (lower is better)
Translates to: SRCSAAWTRRPA*WAPSPRWRCSP
Trigger: AGGTGAACATCTCCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR GCA 72 bp ATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTaGGTTTTGTCAGCTGCCTCCAGGATCTGCAGCACG +
Preference number: 3 (lower is better)
Translates to: MMCRQCRFMSSA*VLSAASRICST
Trigger: CGTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR CCA 72 bp TGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCCTaGAATCCTGTTCCCAGTAAGGGAGCGCTGGCTCCC +
Preference number: 3 (lower is better)
Translates to: CGFMAATTRKGS*NPVPSKGALAP
Trigger: GGGAGCCAGCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CAA 90 bp ATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCAACCGCAGGAGGTCATaGAGCATGGTCTTCCTGGTC +
Preference number: 3 (lower is better)
Translates to: MMCRQCRFMSSACVLSAANRRRS*SMVFLV
Trigger: GACCAGGAAGACCATGCTCAATGACCTCCTGCGGTT...GGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR TCA 72 bp CCCCGATGGAGATGTTCACCTGCCCATCTTCGGGCATaGAGGACCGGAACATGGCTTCAAAGTAGCTGGAGC +
Preference number: 3 (lower is better)
Translates to: PRWRCSPAHLRA*RTGTWLQSSWS
Trigger: GCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTCCATCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
3UTR TCA 72 bp CCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTaGCCTAGCGACTGGCAACCGTCCTTCAATTTTCCA +
Preference number: 3 (lower is better)
Translates to: PQLVTVHRGPMG*PSDWQPSFNFP
Trigger: TGGAAAATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR TCA 72 bp TGCCAAAGTCCAGGCCAAACACATCTCGGGACTTCTTaGAGCCAACCCGCTCCTCATAGGTCAGGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: CQSPGQTHLGTS*SQPAPHRSGWA
Trigger: TGCCCACCCTGACCTATGAGGAGCGGGTTGGCTTCAAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
3UTR GCA 72 bp CGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGTTGTTGTAGAAGCCGT +
Preference number: 3 (lower is better)
Translates to: RSAPSRSSPGSA*STPAAGCCRSR
Trigger: ACGGCTTCTACAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 72 bp CACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTaGCTGCGTTTTGTCAGCTGCCTCCAGGATCTGCAG +
Preference number: 3 (lower is better)
Translates to: HNDVQAVPLHVQ*LRFVSCLQDLQ
Trigger: CTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 72 bp GGTAACAGGAGAACTGGAACCTGTACATCTCCCCGCTaGGGATGTTGTTGTCCACCGTGCCCCCGAAGATGT +
Preference number: 3 (lower is better)
Translates to: GNRRTGTCTSPR*GCCCPPCPRRC
Trigger: ACATCTTCGGGGGCACGGTGGACAACAACATCCGCAGCGGGGAGATGTACAGGTTCCAGTTCTCCTGTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 72 bp GAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATaGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTG +
Preference number: 3 (lower is better)
Translates to: ESRSLPQGAVAS*QPQQERGPGIL
Trigger: CAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 72 bp TGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATaGGTGTGTGGCCCCACTCTGAGTGAATGCACCTGG +
Preference number: 3 (lower is better)
Translates to: CGRSHILWKLGR*VCGPTLSECTW
Trigger: CCAGGTGCATTCACTCAGAGTGGGGCCACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
3UTR CCA 72 bp CGGCTGCTGCTTCCGCCGCACAATCTCCACTATCAGTaGAGAGGAGAGGCGCTCGAACTCCTTCATCATGAT +
Preference number: 3 (lower is better)
Translates to: RLLLPPHNLHYQ*RGEALELLHHD
Trigger: ATCATGATGAAGGAGTTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGATTGTGCGGCGGAAGCAGCAGCCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CAA 90 bp GCTGACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATTCCAGTGCCTGCGTTTaGTCAGCTGCCTCCAGGATC +
Preference number: 3 (lower is better)
Translates to: ADLRALHSKIHLKSGETHSSACV*SAASRI
Trigger: GATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGA...ATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
3UTR-3UTR CAA 90 bp ACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATACATCATGTTGGAGGAGCCTaGGTGACAGGCCCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: TSGPFTPKFTSSQVRPIHHVGGA*VTGPSA
Trigger: GGCACTGGGGCCTGTCACCAAGGCTCCTCCAACATG...ATGTATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR TCA 72 bp GAGGCGTTCTTCATATTCAGAAGGATTCGAGGGAACTaGCCGTCCTCCCTCCACCCCACTGGCCAGAGTACT +
Preference number: 3 (lower is better)
Translates to: EAFFIFRRIRGN*PSSLHPTGQST
Trigger: AGTACTCTGGCCAGTGGGGTGGAGGGAGGACGGTCAGTTCCCTCGAATCCTTCTGAATATGAAGAACGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR GCA 72 bp GCACAGCTGCTCCAGGCGGCACAACTGGAAGCTCAGTaGCAGTTTGTACACATCCATGATGAGCAGCACATC +
Preference number: 3 (lower is better)
Translates to: AQLLQAAQLEAQ*QFVHIHDEQHI
Trigger: GATGTGCTGCTCATCATGGATGTGTACAAACTGGCACTGAGCTTCCAGTTGTGCCGCCTGGAGCAGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 72 bp AAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATaGGCTGACCTAGCGACTGGCAACCGTCCTTCAATT +
Preference number: 3 (lower is better)
Translates to: KIHSLSLYTVAP*ADLATGNRPSI
Trigger: AATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR TCA 72 bp GAGATCTATGCAGGCCACGTCTGTTACTGGTGGCACTaGCCAAGCTATTCACGAGGAAGGGGACGTCCTTCA +
Preference number: 3 (lower is better)
Translates to: EIYAGHVCYWWH*PSYSRGRGRPS
Trigger: TGAAGGACGTCCCCTTCCTCGTGAATAGCTTGGTCAGTGCCACCAGTAACAGACGTGGCCTGCATAGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR GCA 72 bp ACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTaGCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCT +
Preference number: 3 (lower is better)
Translates to: TLVNWCTMMCRQ*RFMSSACVLSA
Trigger: AGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 72 bp AACTTGGAGACCTTGGTGAACTGGTGCACAATGATGTaGAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTT +
Preference number: 3 (lower is better)
Translates to: NLETLVNWCTMM*RQCRFMSSACV
Trigger: AACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTCTCCAAGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
3UTR GCA 72 bp CAGACCTCTCAGGACCTGCAGGCCCCTCTGGTCTTCTaGCATTATTTGAGATCTATGCAGGCCACGTCTGTT +
Preference number: 3 (lower is better)
Translates to: QTSQDLQAPLVF*HYLRSMQATSV
Trigger: AACAGACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGGTCCTGAGAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CAA 90 bp GGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAATCAAACTGGAAGAGGTaGTTGGTTATTTTGGCTCCG +
Preference number: 3 (lower is better)
Translates to: GAPEQVFSWDACPRLVLESNWKR*LVILAP
Trigger: CGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGA...TTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp CACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGATGCGTGTCCACGTCTaGTCCTTGAATTCAAACTGG +
Preference number: 3 (lower is better)
Translates to: HFPKELWLHGSHNKKGVLMRVHV*SLNSNW
Trigger: CCAGTTTGAATTCAAGGACAAGACGTGGACACGCAT...CAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR GCA 72 bp TTCCCAGCTCATCTTGCACTAGGCCACTTCCTAGCCTaGAGGCTGCCTATGGATCTCCTGTTAGCTAAGCAA +
Preference number: 3 (lower is better)
Translates to: FPAHLALGHFLA*RLPMDLLLAKQ
Trigger: TTGCTTAGCTAACAGGAGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR CCA 72 bp CGCTCGAACTCCTTCATCATGATCACCTGGTTGAAGTaGGACTCCTTTACCACGAAGTTCAGGCAGTGCTCC +
Preference number: 3 (lower is better)
Translates to: RSNSFIMITWLK*DSFTTKFRQCS
Trigger: GGAGCACTGCCTGAACTTCGTGGTAAAGGAGTCCCACTTCAACCAGGTGATCATGATGAAGGAGTTCGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 72 bp GAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCTaGTTGAAGTGGGACTCCTTTACCACGAAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: EERRSNSFIMIT*LKWDSFTTKFR
Trigger: CCTGAACTTCGTGGTAAAGGAGTCCCACTTCAACCAGGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CAA 90 bp CCCAGCTCATCTTGCACTAGGCCACTTCCTAGCCTGCAGGCTGCCTATGGATCTGGCTTTAATGGAGGCTaGTCTGTGACAGAATACTCA +
Preference number: 3 (lower is better)
Translates to: PSSSCTRPLPSLQAAYGSGFNGG*SVTEYS
Trigger: TGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC...AGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CAA 90 bp TGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGCCGTCCACTGGCCAGTaGCAAACTTGTATTCAAAGA +
Preference number: 3 (lower is better)
Translates to: WCTMMCRQCRFMSSACVLPSTGQ*QTCIQR
Trigger: TCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGG...CAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR-3UTR CAA 90 bp GATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATTGGCCAGTTGCAAACTaGTATTCAAAGAGGTCGTTT +
Preference number: 3 (lower is better)
Translates to: DVTEFRARSLQVCLHVLDWPVAN*YSKRSF
Trigger: AAACGACCTCTTTGAATACAAGTTTGCAACTGGCCA...ATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 72 bp TCCTGCTGTTTGCAGAGCTCACAAGGATGGTTACCATaGCCACCAGGTGCAAGAGGCGTTCTTCATATTCAG +
Preference number: 3 (lower is better)
Translates to: SCCLQSSQGWLP*PPGARGVLHIQ
Trigger: CTGAATATGAAGAACGCCTCTTGCACCTGGTGGCCATGGTAACCATCCTTGTGAGCTCTGCAAACAGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR-3UTR CAA 90 bp TCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTTTGGGGCCCCACTATTTTGGCTCCGCTTaGCCCAGAGAATACAAACAT +
Preference number: 3 (lower is better)
Translates to: SAPCGTCVFSELMSLGPHYFGSA*PREYKH
Trigger: ATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATA...GTGGGGCCCCAAACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CCA 72 bp AAAATTCACCTCAAGTCAGGTGAGACCCATACATCATaGGTCCCCACTCACAAGTTCCAGGTGGGAAGAGGA +
Preference number: 3 (lower is better)
Translates to: KIHLKSGETHTS*VPTHKFQVGRG
Trigger: TCCTCTTCCCACCTGGAACTTGTGAGTGGGGACCCATGATGTATGGGTCTCACCTGACTTGAGGTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CAA 90 bp ACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATACATGGCTTTAATGGAGGCTaGTCTGTGACAGAATACTCA +
Preference number: 3 (lower is better)
Translates to: TSGPFTPKFTSSQVRPIHGFNGG*SVTEYS
Trigger: TGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC...ATGTATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
3UTR-3UTR CAA 90 bp AGGATGGTTACCATGGCCACCAGGTGCAAGAGGCGTTCTTCATATTCAGAAGGACAGAGTACTCACGTCTaGTCCTTGAATTCAAACTGG +
Preference number: 3 (lower is better)
Translates to: RMVTMATRCKRRSSYSEGQSTHV*SLNSNW
Trigger: CCAGTTTGAATTCAAGGACAAGACGTGAGTACTCTG...TCCTTCTGAATATGAAGAACGCCTCTTGCACCTGGTGGCCATGGTAACCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR GCA 72 bp AACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTTaGCCAGAGAATACAAACATCTTGTCCCGGCACACA +
Preference number: 3 (lower is better)
Translates to: NWKRLLVILAPL*PENTNILSRHT
Trigger: TGTGTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR CCA 72 bp ACTGGCAACCGTCCTTCAATTTTCCACTCCGTCCACTaGCCAGTTGCAAACTTGTATTCAAAGAGGTCGTTT +
Preference number: 3 (lower is better)
Translates to: TGNRPSIFHSVH*PVANLYSKRSF
Trigger: AAACGACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATTGAAGGACGGTTGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp TTCAATTTTCCACTCCGTCCACTGGCCAGTTGCAAACTTGTATTCAAAGAGGTCCCGTCCACTGGCCAGTaGCAAACTTGTATTCAAAGA +
Preference number: 3 (lower is better)
Translates to: FNFPLRPLASCKLVFKEVPSTGQ*QTCIQR
Trigger: TCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGG...GACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp CTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTTGCCCAGATGGCCAGTTGCAAACTaGTATTCAAAGAGGTCGTTT +
Preference number: 3 (lower is better)
Translates to: LEFKLEEVVGYFGSALPRWPVAN*YSKRSF
Trigger: AAACGACCTCTTTGAATACAAGTTTGCAACTGGCCA...TCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR-3UTR CAA 90 bp TTCAATTTTCCACTCCGTCCACTGGCCAGTTGCAAACTTGTATTCAAAGAGGTCTGGCCAGTTGCAAACTaGTATTCAAAGAGGTCGTTT +
Preference number: 3 (lower is better)
Translates to: FNFPLRPLASCKLVFKEVWPVAN*YSKRSF
Trigger: AAACGACCTCTTTGAATACAAGTTTGCAACTGGCCA...GACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CCTCGGCCTCCCGGATGGCCACGTGCAGCAGGGGCGGCCGGGCCCCACCAGCAGTGGGCTGGCCGTGGGTaGCCGTCAAGCAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: PRPPGWPRAAGAAGPHQQWAGRG*PSSNRV
Trigger: CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA...CTGCTGGTGGGGCCCGGCCGCCCCTGCTGCACGTGGCCATCCGGGAGGCCGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp AGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGGCAGGGATCAAGGGCTaGCCAGCAGCCAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSRVEEPPTGQLRGRLGGAGIKG*PAARGS
Trigger: GCTGCCCCTGGCTGCTGGCCAGCCCTTGATCCCTGC...CCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCGGCCTCCCTGGGAACTaGGGCGGCCTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQGRQARRFFTMGRRHRAGLPGN*GGLLLQ
Trigger: CTGGAGCAGGAGGCCGCCCCAGTTCCCAGGGAGGCC...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CACAGGCTCGCTCGGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTCCTCCTCCCAGCAGGTaGGCTCTCGGTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: HRLARALQPHQPRCRSWAPPPSR*ALGPGG
Trigger: GCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGG...AGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCCGAGCGAGCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCCCTCCTCCCAGCAGGTaGGCTCTCGGTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RQGRQARRFFTMGRRHRAPPPSR*ALGPGG
Trigger: GCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGG...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CAGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGGTGGGCTGCTTGGCTaGGGTGGTGCCAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QQPRGRASHWAAPRQAGWGGLLG*GGAKVQ
Trigger: CTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACC...CCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CAGGGTGGGCACCTCCTCGGAAGCACAGGCTCGCTCGGGCACTTCAGCCCCACCCAGCCAGGGGCAGCATaGGCCAGACCTCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: QGGHLLGSTGSLGHFSPTQPGAA*ARPLRT
Trigger: GGTCCTGAGAGGTCTGGCCCATGCTGCCCCTGGCTG...GGTGGGGCTGAAGTGCCCGAGCGAGCCTGTGCTTCCGAGGAGGTGCCCACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR TCA 90 bp GACAGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTTTCCCGGCCGAGCCCTaGCATGCACACAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: DSSRVEEPPTGQLRGRLGFPAEP*HAHRWT
Trigger: AGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAA...ACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp CCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGGGCTGCTCAAGGGGCTaGAGCCAGCAGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PAAAAGSATAGWATWRPWGCSRG*SQQWWP
Trigger: CGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCC...CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp CTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGTGTGGGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATC +
Preference number: 4 (lower is better)
Translates to: LLKGLKPAVVAGPARCVWVRGGG*CFRRTI
Trigger: GATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCAC...CCACACACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGGGGATCTCGCCACTCTaGGCCACCTCCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PWAAQGAEASSGGRASKVGISPL*ATSSQQ
Trigger: CTGCTGGGAGGAGGTGGCCCAGAGTGGCGAGATCCC...CACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CACAGGCTCGCTCGGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTCGAAGGCCTGCCTGCTaGGCACCATCTCCCCGATGG +
Preference number: 4 (lower is better)
Translates to: HRLARALQPHQPRCRSWARRPAC*APSPRW
Trigger: CCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCG...AGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCCGAGCGAGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp AGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCTGGCTGGGTGGGCTGCTTaGCTGAGGTGGTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SRVEEPPTGQLRGRLGGLAGWAA*LRWCQS
Trigger: ACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGC...CAGCCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGACCTCGGCCTCCCGGATaGCCACGTGCAGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LGGEPITEPWPRIHTTPGPRPPG*PRAAGA
Trigger: CGCCCCTGCTGCACGTGGCCATCCGGGAGGCCGAGG...TCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CGGCGCCCAGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTAAGGCTCTGGGCACCCTaGCCCTTGGCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RRPALRTACLRCGRPGSLRLWAP*PLAWQV
Trigger: CACCTGCCAGGCCAAGGGTCAGGGTGCCCAGAGCCT...TAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp AAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGACAGGCCCCAGTGCCTaGGTCCACAACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KPWAAQGAEASSGGRASKTGPSA*VHNTPR
Trigger: CCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGT...CTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCTCAGATGTCGGCCGAGGGGGCGGCTGCTaGTTCCGCCGCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: QARRFFTMGRRHRASDVGRGGGC*FRRTIS
Trigger: GGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCG...GCCGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGCCGAGGGGGCGGCTGCTaGTTCCGCCGCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: GQRVVGRTPKHIEVAVKGRGGGC*FRRTIS
Trigger: GGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCG...GCCTTTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp CACAATGGGCAGGCGCCACAGGGCCTCAGATGTCGGCGCCCAGCTCTGCGCACTATGTCCAGCAGCAGCTaGTGGCTCAGCGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: HNGQAPQGLRCRRPALRTMSSSS*WLSDRR
Trigger: CCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACAT...AGTGCGCAGAGCTGGGCGCCGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCGGTGACAGGCCCCAGTaGCTGAGTCCACAACACGCC +
Preference number: 4 (lower is better)
Translates to: RQGRQARRFFTMGRRHRAGDRPQ*LSPQHA
Trigger: GGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACC...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGACGACCTCCCACCAAGCCCCACTGGGTaGGAGGCCCAAAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GHFSPTNLAVGAGLDDLPPSPTG*EAQSLS
Trigger: GGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTGG...TGGGAGGTCGTCCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTCACGGGGGACTTTGCTaGCTTCTTCCCGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: HGLLKGLKPAVVAGPARCHGGLC*LLPGRA
Trigger: GGCTCGGCCGGGAAGAAGCCAGCAAAGTCCCCCGTG...ACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CAGGCTCGCTCGGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGCCAGTAAGGGAGCGCTaGCTCCCAGCACTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: QARSGTSAPPTSLSELGWPVRER*LPALEW
Trigger: CCACTCTAGTGCTGGGAGCCAGCGCTCCCTTACTGG...CCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCCGAGCGAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGCTGTCGGAGCTGGGCTaGACGACCTCCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PAAAAGSATAGWATWRPWLSELG*TTSQVW
Trigger: CCAGACCTGGGAGGTCGTCCAGCCCAGCTCCGACAG...CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp CCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGCGCACTGCTTGTCTaGGATGTGGGAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PWAAQGAEASSGGRASKVCALLV*DVGGQG
Trigger: TCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCA...CACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGAGGCTGCTCAAGGGGCTaGAGCCAGCAGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LGGEPITEPWPRIHTTPGGCSRG*SQQWWP
Trigger: CGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCC...TCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTCCCAATGTGACTGGGTaGCCCCAGGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HGLLKGLKPAVVAGPARCPNVTG*PQVEAG
Trigger: TCCTGCCTCCACCTGGGGTCACCCAGTCACATTGGG...ACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCCCACCACTGTGTGCTTaGTGCGCCGGGCACCCACGA +
Preference number: 4 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSPPLCA*CAGHPR
Trigger: TCGTGGGTGCCCGGCGCAGCAAGCACACAGTGGTGG...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GCGGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGTTGAGTTGGCTCAGCTaGAGCCGGGCGGCACTCTCG +
Preference number: 4 (lower is better)
Translates to: AARIALWAGRGCPSSNRVLSWLS*SRAALS
Trigger: CGAGAGTGCCGCCCGGCTGCAGCTGAGCCAACTCAA...CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCTGGGCAGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATC +
Preference number: 4 (lower is better)
Translates to: PRRSRCSAAWTRRPACWAVRGGG*CFRRTI
Trigger: GATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCAC...TGCCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCCCCCTCCAGGCCCACTaGATGGCCTCTGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLASSRPSPDMHTGGLGSPLQAH*MASGAC
Trigger: GCAGGCACCAGAGGCCATGCAGTGGGCCTGGAGGGG...GGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR GCA 90 bp GCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGCCCCTCCAGGCCCACTaGATGGCCTCTGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ARIALWAGRGCPSSNRVMPLQAH*MASGAC
Trigger: GCAGGCACCAGAGGCCATGCAGTGGGCCTGGAGGGG...CATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR GCA 90 bp GGTGGTGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGCATATCCTGGGGACCTaGCAGGGGCACCGCACATCC +
Preference number: 4 (lower is better)
Translates to: GGGEPRSRCSVGMRVHLQHILGT*QGHRTS
Trigger: GGATGTGCGGTGCCCCTGGCAGGTCCCCAGGATATG...CTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp CATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTTACACCGTGGCCCCATaGGCTGACCTAGCGACTGGC +
Preference number: 4 (lower is better)
Translates to: HGLLKGLKPAVVAGPARCYTVAP*ADLATG
Trigger: GCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTA...ACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGATAGCCTTGTGGGCTaGCCGTGGGTGCCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: HGLLKGLKPAVVAGPARCDSLVG*PWVPVK
Trigger: CTTGACGGGCACCCACGGCCAGCCCACAAGGCTATC...ACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GCGGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGGATAGCCTTGTGGGCTaGCCGTGGGTGCCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: AARIALWAGRGCPSSNRVDSLVG*PWVPVK
Trigger: CTTGACGGGCACCCACGGCCAGCCCACAAGGCTATC...CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTGCCAGGATAGCCTTGTaGGCTGGCCGTGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GRGCPSSNRVMSQNSAPAARIAL*AGRGCP
Trigger: CGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC...AGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGCCAGGATAGCCTTGTaGGCTGGCCGTGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GQDSLVGWPWVPVKQQSDARIAL*AGRGCP
Trigger: CGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC...ATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TGGAGGAGCCTTGGTGACAGGCCCCAGTGCCTGAGTCCACAACACGCCCAGGCCGAGGCCTCGATGTACTaGCGGCACAGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WRSLGDRPQCLSPQHAQAEASMY*RHSCSR
Trigger: CCTGGAGCAGCTGTGCCGCCAGTACATCGAGGCCTC...GGCCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACCAAGGCTCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGAGGGGCACCCTGACCCTTaGCCTGGCAGGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: WVVSPSLSRGLASTLHQEGHPDP*PGRCTH
Trigger: GTGGGTGCACCTGCCAGGCCAAGGGTCAGGGTGCCC...CTCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CAGGCTCGCTCGGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGGCTGCTTGGCTGAGGTaGTGCCAAAGTCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: QARSGTSAPPTSLSELGWAAWLR*CQSPGQ
Trigger: TTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGC...CCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCCGAGCGAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGCAGCTCCGAGGCAGGCTaGGTGGGCTGCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GQRVVGRTPKHIEVAVKGSSEAG*VGCLAE
Trigger: CTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGCT...GCCTTTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR CCA 90 bp ACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGACGACCTCCCAGGTCATGACAGCAGCCGCGTaGAAGAGCCTCCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: TSAPPTSLSELGWTTSQVMTAAA*KSLPLG
Trigger: GCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTCAT...GACCTGGGAGGTCGTCCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTCGAAGGGCCCGAAGTTaGGCGTCAGGTACTCGACAC +
Preference number: 4 (lower is better)
Translates to: HGLLKGLKPAVVAGPARCRRARS*ASGTRH
Trigger: GTGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCG...ACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR TCA 90 bp GAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTGGCGTGGCCCCATGGGCTaGCCTAGCGACTGGCAACCG +
Preference number: 4 (lower is better)
Translates to: EHGFKVAGAGGQDSLVGWRGPMG*PSDWQP
Trigger: CGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACG...CCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp GCACCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCCGTGGCCCCATGGGCTaGCCTAGCGACTGGCAACCG +
Preference number: 4 (lower is better)
Translates to: APTAIGMRIAGSLLSRQGRGPMG*PSDWQP
Trigger: CGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACG...GCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp GTCCACAACACGCCCAGGCCACAGAAGCCAGGCCAAGCCCCACTGGGTGGGAGGAGGCCAGGGAGTCTATaGTGTCCAGCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VHNTPRPQKPGQAPLGGRRPGSL*CPAAAA
Trigger: AGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCT...CCTCCCACCCAGTGGGGCTTGGCCTGGCTTCTGTGGCCTGGGCGTGTTGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp TCTCCCCACTTCTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACAACAGGCCCCAGTGCCTaGGTCCACAACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPHFWVVSPSLSRGLASTTGPSA*VHNTPR
Trigger: CCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGT...TGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAGAAGTGGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp GGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTAGCGGCTCCGCGCTGTaGCAATGGCTACGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRGCPSSNRVMSQNSAPASGSAL*QWLRGP
Trigger: AGGGCCACGTAGCCATTGTCACAGCGCGGAGCCGCT...AGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp GTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTTCAATTTTCCACTCCGCTGTAAGCCCAACTTaGGGCCACCGCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: VAPWADLATGNRPSIFHSAVSPT*GHRPGP
Trigger: CGGCCCGGGGCGGTGGCCGCAAGTTGGGCTTACAGC...GGAGTGGAAAATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414985.5
CDS-3UTR GCA 90 bp TGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCGAGGGGGCGGCTGCTaGTTCCGCCGCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: WAGRGCPSSNRVMSQNSARGGGC*FRRTIS
Trigger: GGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCG...CGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATC +
Preference number: 4 (lower is better)
Translates to: FGHEGPEHGFKVAGAGGQVRGGG*CFRRTI
Trigger: GATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCAC...CTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCCCCCTCCAGGCCCACTaGATGGCCTCTGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VGWPWVPVKQQSDVTEFRPLQAH*MASGAC
Trigger: GCAGGCACCAGAGGCCATGCAGTGGGCCTGGAGGGG...GCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR GCA 90 bp GGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCTCAGATGTCGTGGGCTGGCCGTGGGTaGCCGTCAAGCAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: GRHGDSSQWAGATGPQMSWAGRG*PSSNRV
Trigger: CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA...CGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCTCAGATGTCGGGTGACAGGCCCCAGTaGCTGAGTCCACAACACGCC +
Preference number: 4 (lower is better)
Translates to: GRHGDSSQWAGATGPQMSGDRPQ*LSPQHA
Trigger: GGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACC...CGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp ATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTACTGGGGCGGCCTCCTaGTCCAGCTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IWGSAKPWAAQGAEASSGTGAAS*SSFWAS
Trigger: GCTGGCCCAGAAGCTGGAGCAGGAGGCCGCCCCAGT...ACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CCAGCAAAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTACGCTCGGGGCTACCTTaGACCGCGCGCCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PAKIHSLSLYTVAPWADLRSGLP*TARRLP
Trigger: TGGCAGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCG...TAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000443265.5
CDS-3UTR CCA 90 bp CAGGGTGGGCACCTCCTCGGAAGCACAGGCTCGCTCGGGCACTTCAGCCCCACCGAAGTTGCAGCAAGATaGGGGGATCTCGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: QGGHLLGSTGSLGHFSPTEVAAR*GDLATL
Trigger: CAGAGTGGCGAGATCCCCCCATCTTGCTGCAACTTC...GGTGGGGCTGAAGTGCCCGAGCGAGCCTGTGCTTCCGAGGAGGTGCCCACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCCTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSLVGWP*VPVKQQ
Trigger: CTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAG...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GCACCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCGCCAGGATAGCCTTGTaGGCTGGCCGTGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: APTAIGMRIAGSLLSRQGARIAL*AGRGCP
Trigger: CGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC...GCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATCGAAGGCCTGCCTGCTaGGCACCATCTCCCCGATGG +
Preference number: 4 (lower is better)
Translates to: GQDSLVGWPWVPVKQQSDRRPAC*APSPRW
Trigger: CCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCG...ATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GCCCAGGCAGATTCGCTGGTGCAGCGCAAGTCTGCTAAGCCTCCTCCCGCATGTCGAAGGCCTGCCTGCTaGGCACCATCTCCCCGATGG +
Preference number: 4 (lower is better)
Translates to: AQADSLVQRKSAKPPPACRRPAC*APSPRW
Trigger: CCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCG...ACATGCGGGAGGAGGCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTTCAGCGACCGCAGGGTaGGCAACTTGGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: HGLLKGLKPAVVAGPARCSATAG*ATWRPW
Trigger: CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGA...ACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp AGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCATCCAGCAGCAGCTGCTaGCTCAGCGACCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SECTWPTWLGAAACTPLPSSSSC*LSDRRV
Trigger: CACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGA...TGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp GCACCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCGGGCACCCTGACCCTTaGCCTGGCAGGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: APTAIGMRIAGSLLSRQGGHPDP*PGRCTH
Trigger: GTGGGTGCACCTGCCAGGCCAAGGGTCAGGGTGCCC...GCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGGCTGGACGACCTCCCAGGTCTGGAAGTCCACGTCATAGCAGTGCAGCTCGTTGGGCACCCTGACCCTTaGCCTGGCAGGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GLDDLPGLEVHVIAVQLVGHPDP*PGRCTH
Trigger: GTGGGTGCACCTGCCAGGCCAAGGGTCAGGGTGCCC...AACGAGCTGCACTGCTATGACGTGGACTTCCAGACCTGGGAGGTCGTCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGCCCATCACTGAGCCGTaGCCTCGCATCCACACTACA +
Preference number: 4 (lower is better)
Translates to: PWAAQGAEASSGGRASKVPITEP*PRIHTT
Trigger: TGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGG...CACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GCACCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCCCAGCACGACCGACCTaGGAGCTGACCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: APTAIGMRIAGSLLSRQGPARPT*ELTSGP
Trigger: GGGCCCTGAGGTCAGCTCCCAGGTCGGTCGTGCTGG...GCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTTGTGAAAACCAGGCCTaGCCCAGCACGACCGACCTG +
Preference number: 4 (lower is better)
Translates to: HGLLKGLKPAVVAGPARCCENQA*PSTTDL
Trigger: CAGGTCGGTCGTGCTGGGCCAGGCCTGGTTTTCACA...ACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTCCAGTAAGGGAGCGCTaGCTCCCAGCACTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: HGLLKGLKPAVVAGPARCPVRER*LPALEW
Trigger: CCACTCTAGTGCTGGGAGCCAGCGCTCCCTTACTGG...ACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGGAGGAGCCTTGGTGACAGGCCCCAGTGCCTGAGTCCACAACACGCCCAGGCCCCAGTAAGGGAGCGCTaGCTCCCAGCACTAGAGTGG +
Preference number: 4 (lower is better)
Translates to: WRSLGDRPQCLSPQHAQAPVRER*LPALEW
Trigger: CCACTCTAGTGCTGGGAGCCAGCGCTCCCTTACTGG...GGCCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACCAAGGCTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGACCCCAGCCATGGTCCTaGGCCTGCTGTGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: LGGEPITEPWPRIHTTPGPQPWS*ACCVLT
Trigger: GGTGAGGACACAGCAGGCCCAGGACCATGGCTGGGG...TCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp CTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCTGGCCCACATGGCTaGGCGCTGCAGCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: LCWLLPGRALTCTQVDWDPGPHG*ALQPAL
Trigger: GAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGG...ATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp CTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCTCGCTGTCGGAGCTaGGCTGGACGACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LCWLLPGRALTCTQVDWDPRCRS*AGRPPR
Trigger: CCTGGGAGGTCGTCCAGCCCAGCTCCGACAGCGAGG...ATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGAAGGGGACGTCCTTCACGTTCAGAGGGAGGCCTAGCCAGGGGCCTCCTCGCCGCTGCTTGGCTGAGGTaGTGCCAAAGTCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GRGRPSRSEGGLARGLLAAAWLR*CQSPGQ
Trigger: TTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGC...GGCGAGGAGGCCCCTGGCTAGGCCTCCCTCTGAACGTGAAGGACGTCCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp CCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCTGGGCAAGCTCCGAGGCAGGCTaGGTGGGCTGCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PRRSRCSAAWTRRPACWASSEAG*VGCLAE
Trigger: CTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGCT...TGCCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp AGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCAAGCTCCGAGGCAGGCTaGGTGGGCTGCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SECTWPTWLGAAACTPLPSSEAG*VGCLAE
Trigger: CTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGCT...TGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR CCA 90 bp GTGGTGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTTCCACGTCGCAGAACTaGCGGCTCTCCCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: VVGSPGAGVQLGCVSTSCSTSQN*RLSHSR
Trigger: GCGGCTGTGGGAGAGCCGCCAGTTCTGCGACGTGGA...ACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCGGCCTCCCTGGGAACTaGGGCGGCCTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DDRRGSASSSAPCGTCVFGLPGN*GGLLLQ
Trigger: CTGGAGCAGGAGGCCGCCCCAGTTCCCAGGGAGGCC...GAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp ACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGCCTCGGCCTCCCGGATaGCCACGTGCAGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: TVTFISRFCLQYACSRLLPRPPG*PRAAGA
Trigger: CGCCCCTGCTGCACGTGGCCATCCGGGAGGCCGAGG...CAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CAGGGTGGGCACCTCCTCGGAAGCACAGGCTCGCTCGGGCACTTCAGCCCCACCGAGCAGGTGTTCAGTTaGGATGCGTGTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: QGGHLLGSTGSLGHFSPTEQVFS*DACPPA
Trigger: TGCAGGTGGACACGCATCCCAACTGAACACCTGCTC...GGTGGGGCTGAAGTGCCCGAGCGAGCCTGTGCTTCCGAGGAGGTGCCCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR TCA 90 bp ACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTTCAATTTTCCACCGTGGCCCCATGGGCTaGCCTAGCGACTGGCAACCG +
Preference number: 4 (lower is better)
Translates to: TVAPWADLATGNRPSIFHRGPMG*PSDWQP
Trigger: CGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACG...GTGGAAAATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CTGCCCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGAGGCTCTGGGCACCCTaGCCCTTGGCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LPCGCGRSHILWKLGRWVRLWAP*PLAWQV
Trigger: CACCTGCCAGGCCAAGGGTCAGGGTGCCCAGAGCCT...CACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR TCA 90 bp TGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGGGACCGACCTGGGAGCTaGCCTCAGGGCCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: CRQCRFMSSACVLSAASRDRPGS*PQGPSL
Trigger: GAGTGAAGGGCCCTGAGGTCAGCTCCCAGGTCGGTC...CCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR TCA 90 bp ACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGACCGACCTGGGAGCTaGCCTCAGGGCCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: TSGGLLSHGLLKGLKPAVDRPGS*PQGPSL
Trigger: GAGTGAAGGGCCCTGAGGTCAGCTCCCAGGTCGGTC...CACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CTGCCCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGGGCTGCTCAAGGGGCTaGAGCCAGCAGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LPCGCGRSHILWKLGRWVGCSRG*SQQWWP
Trigger: CGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCC...CACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR TCA 90 bp GACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCTGGGCCCAATGTGACTGGGTaGCCCCAGGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DLAVVDVAQHGLEGLPAGPNVTG*PQVEAG
Trigger: TCCTGCCTCCACCTGGGGTCACCCAGTCACATTGGG...CCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR TCA 90 bp TGTCCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGCCCCACTCTGAGTaGATGCACCTGGCCCACATG +
Preference number: 4 (lower is better)
Translates to: CPAAAAGSATAGWATWRPWPHSE*MHLAHM
Trigger: CATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCA...AGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR TCA 90 bp AGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCAGGTGGGCTGCTTGGCTaGGGTGGTGCCAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SECTWPTWLGAAACTPLPGGLLG*GGAKVQ
Trigger: CTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACC...TGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR TCA 90 bp GGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGCACATGGCGTCCGAGATaGCAGCAGCCGCGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GQRVVGRTPKHIEVAVKGTWRPR*QQPRGR
Trigger: TCTTCCACGCGGCTGCTGTCATCTCGGACGCCATGT...GCCTTTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGTCTCCCGCGCCTGCGTaGTCTTCCTGCGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PTAIGMRIAGSLLSRQGRSPAPA*SSCEAS
Trigger: GCTGGCTTCGCAGGAAGATCACGCAGGCGCGGGAGA...CCTGCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCTGTAGAGGAACTGCATaGGCACCTCGAAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSCRGTA*APRRAG
Trigger: CCCGGCCCTTCGAGGTGCTCATGCAGTTCCTCTACA...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CGTTGGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGATTCGAGGGAACTaGCCGTCCTCCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: RWAACCRPHPQTHRGGGQRIRGN*PSSLHP
Trigger: GGGGTGGAGGGAGGACGGTCAGTTCCCTCGAATCCT...TTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCCAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR GCA 90 bp TGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCGCTGTAAGCCCAACTTaGGGCCACCGCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: WQPQQERGPGILFPVRERAVSPT*GHRPGP
Trigger: CGGCCCGGGGCGGTGGCCGCAAGTTGGGCTTACAGC...GCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR GCA 90 bp GGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGTTGAGTTGGCTCAGCTaGAGCCGGGCGGCACTCTCG +
Preference number: 4 (lower is better)
Translates to: GTLLASSRPSPDMHTGGLLSWLS*SRAALS
Trigger: CGAGAGTGCCGCCCGGCTGCAGCTGAGCCAACTCAA...CAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGCCCTTTGAGTTGGCTCAGCTaGAGCCGGGCGGCACTCTCG +
Preference number: 4 (lower is better)
Translates to: PALEWIHMGPSLGQEGSPLSWLS*SRAALS
Trigger: CGAGAGTGCCGCCCGGCTGCAGCTGAGCCAACTCAA...AGGGCTGCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp ATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGCGAGGGGGCGGCTGCTaGTTCCGCCGCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: IALWAGRGCPSSNRVMSQRGGGC*FRRTIS
Trigger: GGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCG...CTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATC +
Preference number: 4 (lower is better)
Translates to: RHVDLAVVDVAQHGLEGLVRGGG*CFRRTI
Trigger: GATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCAC...CAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GCCCAGGCAGATTCGCTGGTGCAGCGCAAGTCTGCTAAGCCTCCTCCCGCATGTACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: AQADSLVQRKSAKPPPACTRRPA*WAPSPR
Trigger: TCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGT...ACATGCGGGAGGAGGCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LLASSRPSPDMHTGGLGSTRRPA*WAPSPR
Trigger: TCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGT...GGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GTCCACAACACGCCCAGGCCACAGAAGCCAGGCCAAGCCCCACTGGGTGGGAGGATGATGTGCAGGCAGTaGCGCTTCATGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VHNTPRPQKPGQAPLGGRMMCRQ*RFMSSA
Trigger: GGCACTGGACATGAAGCGGCACTGCCTGCACATCAT...CCTCCCACCCAGTGGGGCTTGGCCTGGCTTCTGTGGCCTGGGCGTGTTGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TCGGCGCCCAGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTGGCAGGTGCACCCACTaGCATAGGCATGCGCATAGC +
Preference number: 4 (lower is better)
Translates to: SAPSSAHCLSEMWEARESGRCTH*HRHAHS
Trigger: GCTATGCGCATGCCTATGGCAGTGGGTGCACCTGCC...AGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TGTCCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTCCTTGGCCTGGCAGGTaGACCCACTGCCATAGGCAT +
Preference number: 4 (lower is better)
Translates to: CPAAAAGSATAGWATWRPPWPGR*THCHRH
Trigger: ATGCCTATGGCAGTGGGTGCACCTGCCAGGCCAAGG...AGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGGTGCCTGGGCGCTGCAGCCTaGACTCCACTTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: CWLSDRRVGNLETLVNWCLGAAA*TPLPGA
Trigger: AGCACCTGGAAGTGGAGTGCAGGCTGCAGCGCCCAG...GCACCAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR GCA 90 bp GCACCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCGCAGGCTGGGTGGGCTaGTTGGCTGAGGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: APTAIGMRIAGSLLSRQGAGWVG*LAEVVP
Trigger: TGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGC...GCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TGGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGCTCCTGCAGCCCCATTaGAGGGATCAAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: WAACCRPHPQTHRGGGQRLLQPH*RDQGLA
Trigger: GGCCAGCCCTTGATCCCTGCAATGGGGCTGCAGGAG...CCTTTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp CCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCCCATCACAGTGCTCCTTGAGTTaGCTCAGCTGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PLGGRPKVSPHFWVVSPSQCSLS*LSCSRA
Trigger: CGCCCGGCTGCAGCTGAGCCAACTCAAGGAGCACTG...TGATGGGCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGTGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCCCAATGTCCACTGGCTaGTCCAAGGGAGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GGEPRSRCSVGMRVHVLSPMSTG*SKGVRG
Trigger: CCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGG...GGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCGGGGCCAATGTCCACTaGCTGGTCCAAGGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: GWPWVPVKQQSDVTEFRAGANVH*LVQGSA
Trigger: CGCACTCCCTTGGACCAGCCAGTGGACATTGGCCCC...GGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR CCA 90 bp GGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTGGGGCCAATGTCCACTaGCTGGTCCAAGGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: GRGCPSSNRVMSQNSAPAGANVH*LVQGSA
Trigger: CGCACTCCCTTGGACCAGCCAGTGGACATTGGCCCC...AGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR CCA 90 bp CGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACGAAGGCCTGCCTGCTaGGCACCATCTCCCCGATGG +
Preference number: 4 (lower is better)
Translates to: RVLGRHVDLAVVDVAQHGRRPAC*APSPRW
Trigger: CCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCG...TCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGTCCAGCAGCAGCTGCTaGCTCAGCGACCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FGHEGPEHGFKVAGAGGQSSSSC*LSDRRV
Trigger: CACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGA...CTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGCCAAGCCCCACTGGGTaGGAGGCCCAAAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QLLAQRPQGGQLGDLGELPSPTG*EAQSLS
Trigger: GGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTGG...CAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp ACTCCTCCTTCTCACCCAGCACGAACTCCACGTCGCAGAACTGGCGGCTCTCCCTGGAAGGGGCCAGCCTaGAGGCCTTCACAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: TPPSHPARTPRRRTGGSPWKGPA*RPSQPF
Trigger: GAAGGGCTGTGAAGGCCTCCAGGCTGGCCCCTTCCA...GGGAGAGCCGCCAGTTCTGCGACGTGGAGTTCGTGCTGGGTGAGAAGGAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTGAGGAGGCTGCCCTGTaGGTGTGGCAGGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: GRGCPSSNRVMSQNSAPAEEAAL*VWQEPH
Trigger: ATGTGGCTCCTGCCACACCCACAGGGCAGCCTCCTC...AGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR CCA 90 bp AGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCACCTCCAGGAGGGATTTaGAGGAGGCTGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SECTWPTWLGAAACTPLPPPGGI*RRLPCG
Trigger: CCCACAGGGCAGCCTCCTCCAAATCCCTCCTGGAGG...TGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp CCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGCCCTCCTCCAGGAGGGATTTaGAGGAGGCTGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PALEWIHMGPSLGQEGSPPPGGI*RRLPCG
Trigger: CCCACAGGGCAGCCTCCTCCAAATCCCTCCTGGAGG...AGGGCTGCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp ACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGGAAGAGCCTCCCACTaGGCAGCTCCGAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSGGLLSHGLLKGLKPAVGRASH*AAPRQA
Trigger: AGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCC...CACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp AAGGGGACGTCCTTCACGTTCAGAGGGAGGCCTAGCCAGGGGCCTCCTCGCCAGCTCCCTCCACCCCACTaGCCAGAGTACTCACGTCTT +
Preference number: 4 (lower is better)
Translates to: KGTSFTFRGRPSQGPPRQLPPPH*PEYSRL
Trigger: AAGACGTGAGTACTCTGGCCAGTGGGGTGGAGGGAG...CTGGCGAGGAGGCCCCTGGCTAGGCCTCCCTCTGAACGTGAAGGACGTCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp GGAAGGGGACGTCCTTCACGTTCAGAGGGAGGCCTAGCCAGGGGCCTCCTCGCCCAAGGATGGTTACCATaGCCACCAGGTGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRGRPSRSEGGLARGLLAQGWLP*PPGARG
Trigger: GCCTCTTGCACCTGGTGGCCATGGTAACCATCCTTG...GGCGAGGAGGCCCCTGGCTAGGCCTCCCTCTGAACGTGAAGGACGTCCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR TCA 90 bp GGCCACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTGGAGGCCAATTGTCCACATCGAAGGGCCCGAAGTTaGGCGTCAGGTACTCGACAC +
Preference number: 4 (lower is better)
Translates to: GHLLPAGELSVLEANCPHRRARS*ASGTRH
Trigger: GTGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCG...ATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414985.5
CDS-3UTR TCA 90 bp AAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTCCTCCTCCCAGCAGGTaGGCTCTCGGTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KIHSLSLYTVAPWADLATPPPSR*ALGPGG
Trigger: GCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGG...AGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCTGGGCATCAGGCAGTGCTCCTTaGGTTGGCTCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRRSRCSAAWTRRPACWASGSAP*VGSAAA
Trigger: GGCTGCAGCTGAGCCAACTCAAGGAGCACTGCCTGA...TGCCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR TCA 90 bp GGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGGAGAGCTGGGGGAATaGAGGGGCCAATGTCCACTG +
Preference number: 4 (lower is better)
Translates to: GQDSLVGWPWVPVKQQSDGELGE*RGQCPL
Trigger: CAGTGGACATTGGCCCCTTCATTCCCCCAGCTCTCC...ATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR TCA 90 bp TGGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCTGTGTGGCCCCACTCTaGGTGAATGCACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WLPALEWIHMGPSLGQEGCVAPL*VNAPGP
Trigger: TGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACA...GCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR GCA 90 bp GTCCACAACACGCCCAGGCCACAGAAGCCAGGCCAAGCCCCACTGGGTGGGAGGGGTGTTCAGTTGGGATaGGTGTCCACGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VHNTPRPQKPGQAPLGGRGVQLG*VSTSCP
Trigger: AGGACAAGACGTGGACACGCATCCCAACTGAACACC...CCTCCCACCCAGTGGGGCTTGGCCTGGCTTCTGTGGCCTGGGCGTGTTGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTCGAGGGGGCGGCTGCTaGTTCCGCCGCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: HVDLAVVDVAQHGLEGLPRGGGC*FRRTIS
Trigger: GGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCG...AGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGCTGCATGGCCTCTGGTaGCTGCAGACATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: PAAAAGSATAGWATWRPWLHGLW*LQTSPR
Trigger: TCTTGGTGATGTCTGCAGGCACCAGAGGCCATGCAG...CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR GCA 90 bp CCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCCCATCAATGGACTCGAAGGCCTaGCTGCTGGGCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: PLGGRPKVSPHFWVVSPSMDSKA*LLGTIS
Trigger: GGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCAT...TGATGGGCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAATGGACTCGAAGGCCTaGCTGCTGGGCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: SVGRAGRHGDSSQWAGATMDSKA*LLGTIS
Trigger: GGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCAT...TGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TGTCCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: CPAAAAGSATAGWATWRPSPGSA*STPAAG
Trigger: ACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGA...AGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GTCCACAACACGCCCAGGCCACAGAAGCCAGGCCAAGCCCCACTGGGTGGGAGGTTCATGTCCAGTGCCTaGGTTTTGTCAGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VHNTPRPQKPGQAPLGGRFMSSA*VLSAAS
Trigger: GGAGGCAGCTGACAAAACGCAGGCACTGGACATGAA...CCTCCCACCCAGTGGGGCTTGGCCTGGCTTCTGTGGCCTGGGCGTGTTGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp AAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGCCGCTTCATGTCCAGTaGCTGCGTTTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KPWAAQGAEASSGGRASKPLHVQ*LRFVSC
Trigger: GCAGCTGACAAAACGCAGGCACTGGACATGAAGCGG...CTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGGGCAGGTGCACCCACTaGCATAGGCATGCGCATAGC +
Preference number: 4 (lower is better)
Translates to: QLLAQRPQGGQLGDLGELGRCTH*HRHAHS
Trigger: GCTATGCGCATGCCTATGGCAGTGGGTGCACCTGCC...CAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GCCCAGGCAGATTCGCTGGTGCAGCGCAAGTCTGCTAAGCCTCCTCCCGCATGTGGCAGGTGCACCCACTaGCATAGGCATGCGCATAGC +
Preference number: 4 (lower is better)
Translates to: AQADSLVQRKSAKPPPACGRCTH*HRHAHS
Trigger: GCTATGCGCATGCCTATGGCAGTGGGTGCACCTGCC...ACATGCGGGAGGAGGCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACACCTTGGCCTGGCAGGTaGACCCACTGCCATAGGCAT +
Preference number: 4 (lower is better)
Translates to: SVGRAGRHGDSSQWAGATPWPGR*THCHRH
Trigger: ATGCCTATGGCAGTGGGTGCACCTGCCAGGCCAAGG...TGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp ACTCCTCCTTCTCACCCAGCACGAACTCCACGTCGCAGAACTGGCGGCTCTCCCGGCCGAGCCCTGACATaGACACAGGTGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: TPPSHPARTPRRRTGGSPGRALT*TQVDWD
Trigger: ATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCC...GGGAGAGCCGCCAGTTCTGCGACGTGGAGTTCGTGCTGGGTGAGAAGGAGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp TGTCCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTGGCCACTTCCTAGCCTaGAGGCTGCCTATGGATCTC +
Preference number: 4 (lower is better)
Translates to: CPAAAAGSATAGWATWRPGHFLA*RLPMDL
Trigger: GAGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCC...AGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCGGCCACTTCCTAGCCTaGAGGCTGCCTATGGATCTC +
Preference number: 4 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSGHFLA*RLPMDL
Trigger: GAGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCC...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGGTTCCCAGCTCATCTTaGACTAGGCCACTTCCTAGC +
Preference number: 4 (lower is better)
Translates to: PWAAQGAEASSGGRASKVVPSSS*TRPLPS
Trigger: GCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGGAAC...CACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGCCCTGGATTTGGAGGAGGCTaGCCTGTGGGTGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PALEWIHMGPSLGQEGSPGFGGG*PVGVAG
Trigger: TCCTGCCACACCCACAGGGCAGCCTCCTCCAAATCC...AGGGCTGCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR GCA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCCGCTCCCTCCAGGTATaGCTTCATGTCCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: RQGRQARRFFTMGRRHRARSLQV*LHVQCP
Trigger: TGGACATTGGACATGAAGGCATACCTGGAGGGAGCG...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452988.5
CDS-3UTR GCA 90 bp GGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGCTCACACTCCTTGTGCGCAGGCTGGGTGGGCTaGTTGGCTGAGGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GAGVQLGCVSTCSSHSLCAGWVG*LAEVVP
Trigger: TGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGC...GCACAAGGAGTGTGAGCTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR GCA 90 bp GACAGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTACCATGGCCACCAGGTaGAAGAGGCGTTCTTCATAT +
Preference number: 4 (lower is better)
Translates to: DSSRVEEPPTGQLRGRLGTMATR*KRRSSY
Trigger: ATATGAAGAACGCCTCTTGCACCTGGTGGCCATGGT...ACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp GCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGCGCTCGGGGCTACCTTaGACCGCGCGCCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ASWQPQQERGPGILFPVRRSGLP*TARRLP
Trigger: TGGCAGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCG...CCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR CCA 90 bp CCCAGGTCTGGAAGTCCACGTCATAGCAGTGCAGCTCGTTGGGCAGCGTGTTGTGGGATCTCGCCACTCTaGGCCACCTCCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRSGSPRHSSAARWAACCGISPL*ATSSQQ
Trigger: CTGCTGGGAGGAGGTGGCCCAGAGTGGCGAGATCCC...ACAACACGCTGCCCAACGAGCTGCACTGCTATGACGTGGACTTCCAGACCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR CCA 90 bp AGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCACCAATGTCCACTGGCTaGTCCAAGGGAGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: SECTWPTWLGAAACTPLPPMSTG*SKGVRG
Trigger: CCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGG...TGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp GTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGGGGCCAATGTCCACTaGCTGGTCCAAGGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: VGWPWVPVKQQSDVTEFRGANVH*LVQGSA
Trigger: CGCACTCCCTTGGACCAGCCAGTGGACATTGGCCCC...GCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR CCA 90 bp GTAGAGCGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: VERVLGRHVDLAVVDVAQLVGWP*VPVKQQ
Trigger: CTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAG...CTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: RVLGRHVDLAVVDVAQHGLVGWP*VPVKQQ
Trigger: CTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAG...TCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp AGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAAGCCAGGATAGCCTTGTaGGCTGGCCGTGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RRGSASSSAPCGTCVFSEARIAL*AGRGCP
Trigger: CGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC...TTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGGTGCTCAGCGACCGCAGGGTaGGCAACTTGGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: CWLSDRRVGNLETLVNWCSATAG*ATWRPW
Trigger: CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGA...GCACCAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCCCTCCTCCCGCATGTTaGAGGAGCCTTGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: LLASSRPSPDMHTGGLGSPPPAC*RSLGDR
Trigger: CCTGTCACCAAGGCTCCTCCAACATGCGGGAGGAGG...GGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp ACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGCCAGCACGACCGACCTaGGAGCTGACCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TVTFISRFCLQYACSRLLPARPT*ELTSGP
Trigger: GGGCCCTGAGGTCAGCTCCCAGGTCGGTCGTGCTGG...CAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCGGGTCTGCTAAGCCATaGGCTGCTCAAGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSGSAKP*AAQGAE
Trigger: TTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCC...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGCCACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTGGAGGCCAATTGTCCACATCCTTCCCAATGTGACTaGGTGACCCCAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GHLLPAGELSVLEANCPHPSQCD*VTPGGG
Trigger: GCCTCCACCTGGGGTCACCCAGTCACATTGGGAAGG...ATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp AAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGTTCCCCAAGGAGCTGTaGCTTCATGGCAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: KPWAAQGAEASSGGRASKFPKEL*LHGSHN
Trigger: GTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAA...CTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGACTGAGTGAATGCACCTaGCCCACATGGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LGGEPITEPWPRIHTTPGLSECT*PTWLGA
Trigger: AGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAG...TCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp TTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCGCTGGGTGGGCTGCTTaGCTGAGGTGGTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LLASSRPSPDMHTGGLGSAGWAA*LRWCQS
Trigger: ACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGC...GGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGAGGCTGGGTGGGCTGCTTaGCTGAGGTGGTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: WVVSPSLSRGLASTLHQEAGWAA*LRWCQS
Trigger: ACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGC...CTCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCCCATCAGTTCAAGGAGGCTTCTaGGTAGGCCCCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLGGRPKVSPHFWVVSPSVQGGF*VGPSRR
Trigger: CCTCCTGGAGGGGCCTACCCAGAAGCCTCCTTGAAC...TGATGGGCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR TCA 90 bp TTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTCGAAGGGCCCGAAGTTaGGCGTCAGGTACTCGACAC +
Preference number: 4 (lower is better)
Translates to: LSLYTVAPWADLATGNRPRRARS*ASGTRH
Trigger: GTGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCG...AGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000443265.5
CDS-3UTR TCA 90 bp GGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGGCCCCGGAGAGCTGGGGGAATaGAGGGGCCAATGTCCACTG +
Preference number: 4 (lower is better)
Translates to: GCGRSHILWKLGRWVCGPGELGE*RGQCPL
Trigger: CAGTGGACATTGGCCCCTTCATTCCCCCAGCTCTCC...GGGGCCACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR TCA 90 bp GAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTGGGGAGAGCTGGGGGAATaGAGGGGCCAATGTCCACTG +
Preference number: 4 (lower is better)
Translates to: EHGFKVAGAGGQDSLVGWGELGE*RGQCPL
Trigger: CAGTGGACATTGGCCCCTTCATTCCCCCAGCTCTCC...CCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR TCA 90 bp TGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCAGAGATGTGCCTCATaGTCAAGCCCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WAGRGCPSSNRVMSQNSAQRCAS*SSPLQA
Trigger: GGCCTGGAGGGGGCTTGATCATGAGGCACATCTCTG...CGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR TCA 90 bp GCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGCCACCAGCCCATCTTCGGGCATaGAGGACCGGAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: ACCRPHPQTHRGGGQRPPAHLRA*RTGTWL
Trigger: AAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGC...TGGTGGCCTTTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp GAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTGGCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGT +
Preference number: 4 (lower is better)
Translates to: EHGFKVAGAGGQDSLVGWPRAAC*PRRSRC
Trigger: ACATCTACTACGGCGAGGTCAACATGCCGCCCGAGG...CCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp TGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGT +
Preference number: 4 (lower is better)
Translates to: WAGRGCPSSNRVMSQNSAPRAAC*PRRSRC
Trigger: ACATCTACTACGGCGAGGTCAACATGCCGCCCGAGG...CGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR TCA 90 bp GTAGAGCGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGT +
Preference number: 4 (lower is better)
Translates to: VERVLGRHVDLAVVDVAQPRAAC*PRRSRC
Trigger: ACATCTACTACGGCGAGGTCAACATGCCGCCCGAGG...CTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp TTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGTGCGCACTGCTTGTCTaGGATGTGGGAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FGHEGPEHGFKVAGAGGQCALLV*DVGGQG
Trigger: TCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCA...CTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp AGGATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGAGGCTCTGGGCACCCTaGCCCTTGGCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RICSTFCTVTFISRFCLQRLWAP*PLAWQV
Trigger: CACCTGCCAGGCCAAGGGTCAGGGTGCCCAGAGCCT...CTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CACACACCTGCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGGACCGACCTGGGAGCTaGCCTCAGGGCCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: HTPAYTQRRAGHFPKELWDRPGS*PQGPSL
Trigger: GAGTGAAGGGCCCTGAGGTCAGCTCCCAGGTCGGTC...CCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGCAGGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp GATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCCCCAATGTGACTGGGTaGCCCCAGGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DDRRGSASSSAPCGTCVFPNVTG*PQVEAG
Trigger: TCCTGCCTCCACCTGGGGTCACCCAGTCACATTGGG...GAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CAGGTAAGGCCACTGACCTACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAATCTCCCGCGCCTGCGTaGTCTTCCTGCGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QVRPLTYIWGSAKPWAAQSPAPA*SSCEAS
Trigger: GCTGGCTTCGCAGGAAGATCACGCAGGCGCGGGAGA...TTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGGCCTTACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp AGCAGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCTCACGTCTTGTCCTTaGATTCAAACTGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSRVEEPPTGQLRGRLGGLTSCP*IQTGRG
Trigger: ACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGAG...CCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR GCA 90 bp ACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGAGGCGCCGCCAGCGATaGACTGTTTCGAAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TVTFISRFCLQYACSRLLRRRQR*TVSKGP
Trigger: CGGGCCCTTCGAAACAGTGCATCGCTGGCGGCGCCT...CAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp AGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCCCACCACTGTGTGCTTaGTGCGCCGGGCACCCACGA +
Preference number: 4 (lower is better)
Translates to: SNRVMSQNSAPAPSRYAFPPLCA*CAGHPR
Trigger: TCGTGGGTGCCCGGCGCAGCAAGCACACAGTGGTGG...GAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp GCGGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGCCTGGATCAGAGATGTaGCTCATGATCAAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: AARIALWAGRGCPSSNRVPGSEM*LMIKPP
Trigger: AGGGGGCTTGATCATGAGGCACATCTCTGATCCAGG...CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR GCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCCGCTCCCTCCAGGTATaGCTTCATGTCCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSRSLQV*LHVLDQ
Trigger: CTGATCCAGGACATGAAGGCATACCTGGAGGGAGCG...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCATGGAGATGTTCACCTaGCCATCTTCGGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: RQGRQARRFFTMGRRHRAMEMFT*PSSGMK
Trigger: CTTCATGCCCGAAGATGGGCAGGTGAACATCTCCAT...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGACGACCTCCCAATGGAGATGTTCACCTaGCCATCTTCGGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GHFSPTNLAVGAGLDDLPMEMFT*PSSGMK
Trigger: CTTCATGCCCGAAGATGGGCAGGTGAACATCTCCAT...TGGGAGGTCGTCCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp ATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: IALWAGRGCPSSNRVMSQTRRPA*WAPSPR
Trigger: TCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGT...CTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTGGATGGACTCGAAGGCCTaGCTGCTGGGCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: EHGFKVAGAGGQDSLVGWMDSKA*LLGTIS
Trigger: GGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCAT...CCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GCACCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCACAACCAGCACGTTCTaGAGGTCCACGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: APTAIGMRIAGSLLSRQGTTSTF*RSTEAS
Trigger: CGAGGCCTCCGTGGACCTGCAGAACGTGCTGGTTGT...GCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CGTTGGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAATCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RWAACCRPHPQTHRGGGQSPGSA*STPAAG
Trigger: ACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGA...TTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp TGGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCTCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: WLPALEWIHMGPSLGQEGSPGSA*STPAAG
Trigger: ACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGA...GCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTTGGTGCACAATGATGTaGAGGCAGTGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: HGLLKGLKPAVVAGPARCWCTMM*RQCRFM
Trigger: CATGAAGCGGCACTGCCTGCACATCATTGTGCACCA...ACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp AGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAAATGTCCAGCAGCAGCTaGTGGCTCAGCGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: SLVGWPWVPVKQQSDVTEMSSSS*WLSDRR
Trigger: CCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACAT...TTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp GGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGCCCAGCTCTGCGCACTaGTTGTCTGAGATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GEPRSRCSVGMRVHVLSLPSSAH*LSEMWE
Trigger: CTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGG...CAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp TGTCCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCGCTCGGGGCTACCTTaGACCGCGCGCCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CPHVIQPGVAVIASKDPQRSGLP*TARRLP
Trigger: TGGCAGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCG...CTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000443265.5
CDS-3UTR CCA 90 bp ATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGCAGTGCTCCTTGAGTTaGCTCAGCTGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: IALWAGRGCPSSNRVMSQQCSLS*LSCSRA
Trigger: CGCCCGGCTGCAGCTGAGCCAACTCAAGGAGCACTG...CTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCAATCTCCACTATCAGTaGAGAGGAGAGGCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: RQGRQARRFFTMGRRHRANLHYQ*RGEALE
Trigger: TTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGATT...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACCAATGTCCACTGGCTaGTCCAAGGGAGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: RVLGRHVDLAVVDVAQHGPMSTG*SKGVRG
Trigger: CCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGG...TCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTGGCCAATGTCCACTGGCTaGTCCAAGGGAGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: EHGFKVAGAGGQDSLVGWPMSTG*SKGVRG
Trigger: CCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGG...CCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp ACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTTCAATTTTCCACCTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: TVAPWADLATGNRPSIFHLVGWP*VPVKQQ
Trigger: CTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAG...GTGGAAAATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTAGATAGCCTTGTGGGCTaGCCGTGGGTGCCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: PVKQQSDVTEFRARSLQVDSLVG*PWVPVK
Trigger: CTTGACGGGCACCCACGGCCAGCCCACAAGGCTATC...TACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp ATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCGATAGCCTTGTGGGCTaGCCGTGGGTGCCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: IFGHEGPEHGFKVAGAGGDSLVG*PWVPVK
Trigger: CTTGACGGGCACCCACGGCCAGCCCACAAGGCTATC...GCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACTTTGCTGGCTTCGCCAGGATAGCCTTGTaGGCTGGCCGTGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GLSVTEYSARDTGDFAGFARIAL*AGRGCP
Trigger: CGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC...GAAGCCAGCAAAGTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGTCCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTGCACCATCTCCCCGATaGAGATGTTCACCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: CPAAAAGSATAGWATWRPAPSPR*RCSPAH
Trigger: ATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGC...AGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTCGAAGGCCTGCCTGCTaGGCACCATCTCCCCGATGG +
Preference number: 4 (lower is better)
Translates to: HVDLAVVDVAQHGLEGLPRRPAC*APSPRW
Trigger: CCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCG...AGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TGGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGATGTAGCGCAGCATaGACTCGAAGGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: WLPALEWIHMGPSLGQEGRCSAA*TRRPAC
Trigger: GCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCT...GCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCTCCAGGCGGCACAACTaGAAGCTCAGTGCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSSRRHN*KLSASL
Trigger: CAAACTGGCACTGAGCTTCCAGTTGTGCCGCCTGGA...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTAGAGGCCTCGATGTACTaGCGGCACAGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PVKQQSDVTEFRARSLQVEASMY*RHSCSR
Trigger: CCTGGAGCAGCTGTGCCGCCAGTACATCGAGGCCTC...TACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp GCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCTCCAGCAGCAGCTGCTaGCTCAGCGACCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AYTQRRAGHFPKELWLHGSSSSC*LSDRRV
Trigger: CACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGA...GCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACATCCAGCAGCAGCTGCTaGCTCAGCGACCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTSSSSC*LSDRRV
Trigger: CACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGA...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGGCGATTCTTCACAATaGGCAGGCGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VLGRHVDLAVVDVAQHGLGDSSQ*AGATGP
Trigger: AGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCC...GAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTGGCGATTCTTCACAATaGGCAGGCGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LSLYTVAPWADLATGNRPGDSSQ*AGATGP
Trigger: AGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCC...AGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp TGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGAGCCCAGGCAGATTCGCTaGTGCAGCGCAAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: WVVSPSLSRGLASTLHQEPRQIR*CSASLL
Trigger: TAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGG...CTCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGGAGACCCATACATCATaGGTCCCCACTCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: PWAAQGAEASSGGRASKVETHTS*VPTHKF
Trigger: GAACTTGTGAGTGGGGACCCATGATGTATGGGTCTC...CACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCCACGGGGGACTTTGCTaGCTTCTTCCCGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VNWCTMMCRQCRFMSSACHGGLC*LLPGRA
Trigger: GGCTCGGCCGGGAAGAAGCCAGCAAAGTCCCCCGTG...GCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp TCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCAGACACGGGGGACTTTGCTaGCTTCTTCCCGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SQNSAPAPSRYAFMSWIRHGGLC*LLPGRA
Trigger: GGCTCGGCCGGGAAGAAGCCAGCAAAGTCCCCCGTG...TCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCGCAAGGTGTGTGTGGTaGGTAGCACTGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSARCVW*VALLWL
Trigger: AAGCCACAGCAGTGCTACCCACCACACACACCTTGC...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGGGTCTGCTAAGCCATaGGCTGCTCAAGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AGRGCPSSNRVMSQNSAPGSAKP*AAQGAE
Trigger: TTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCC...GGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCCTTCCCAATGTGACTaGGTGACCCCAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PTAIGMRIAGSLLSRQGRPSQCD*VTPGGG
Trigger: GCCTCCACCTGGGGTCACCCAGTCACATTGGGAAGG...CCTGCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CAGGCTCGCTCGGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGACAAGAAAGGGGTCCTaGAATCCTGTTCCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: QARSGTSAPPTSLSELGWTRKGS*NPVPSK
Trigger: CTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGT...CCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCCGAGCGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGCTCACACTCCTTGTGCAGCAGTGCAGCTCGTTaGGCAGCGTGTTGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: GAGVQLGCVSTCSSHSLCSSAAR*AACCRP
Trigger: CGGCCGACAACACGCTGCCCAACGAGCTGCACTGCT...GCACAAGGAGTGTGAGCTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp GCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCCTGTCGGAGCTGGGCTaGACGACCTCCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: AYTQRRAGHFPKELWLHGLSELG*TTSQVW
Trigger: CCAGACCTGGGAGGTCGTCCAGCCCAGCTCCGACAG...GCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGGCCTCATAGGTCAGGGTaGGCACCTCCTCGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: CRQCRFMSSACVLSAASRPHRSG*APPRKH
Trigger: GTGCTTCCGAGGAGGTGCCCACCCTGACCTATGAGG...CCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp ACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGCCTCATAGGTCAGGGTaGGCACCTCCTCGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TSGGLLSHGLLKGLKPAVPHRSG*APPRKH
Trigger: GTGCTTCCGAGGAGGTGCCCACCCTGACCTATGAGG...CACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CCCAGGTCTGGAAGTCCACGTCATAGCAGTGCAGCTCGTTGGGCAGCGTGTTGTGCTGTAGCCATATCCTaGGGACCTGCCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: PRSGSPRHSSAARWAACCAVAIS*GPARGT
Trigger: GGTGCCCCTGGCAGGTCCCCAGGATATGGCTACAGC...ACAACACGCTGCCCAACGAGCTGCACTGCTATGACGTGGACTTCCAGACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR TCA 90 bp GAATACAAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCAGCAAGATGGCGTGGCCCCATGGGCTaGCCTAGCGACTGGCAACCG +
Preference number: 4 (lower is better)
Translates to: EYKHLVPAHSHGEVAARWRGPMG*PSDWQP
Trigger: CGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACG...CCATCTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGTCAGGCAGTGCTCCTTaGGTTGGCTCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RHVDLAVVDVAQHGLEGLSGSAP*VGSAAA
Trigger: GGCTGCAGCTGAGCCAACTCAAGGAGCACTGCCTGA...CAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR TCA 90 bp GATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATTTCCCGGCCGAGCCCTaGCATGCACACAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: DVTEFRARSLQVCLHVLDFPAEP*HAHRWT
Trigger: AGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAA...ATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR TCA 90 bp GCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGCCACCACATCTCGGGACTTCTTaGAGCCAACCCGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ACCRPHPQTHRGGGQRPPHLGTS*SQPAPH
Trigger: ATGAGGAGCGGGTTGGCTTCAAGAAGTCCCGAGATG...TGGTGGCCTTTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CAGGCTCGCTCGGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTGGTCTTCTGCCATTATTTaGGATCTATGCAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: QARSGTSAPPTSLSELGWSSAII*DLCRPR
Trigger: ACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGA...CCAGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCCGAGCGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR GCA 90 bp GGAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATC +
Preference number: 4 (lower is better)
Translates to: GDVHLPIFGHEGPEHGFKVRGGG*CFRRTI
Trigger: GATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCAC...TTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGAGCGCTCCCTCCAGGTATaGCTTCATGTCCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: WVVSPSLSRGLASTLHQERSLQV*LHVLDQ
Trigger: CTGATCCAGGACATGAAGGCATACCTGGAGGGAGCG...CTCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTTGGGCTGGCCGTGGGTaGCCGTCAAGCAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: HVDLAVVDVAQHGLEGLPWAGRG*PSSNRV
Trigger: CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA...AGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCTGGGCTGGCCGTGGGTaGCCGTCAAGCAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: VNWCTMMCRQCRFMSSACWAGRG*PSSNRV
Trigger: CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA...GCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp ATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCTGGGCTGGCCGTGGGTaGCCGTCAAGCAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: MSQNSAPAPSRYAFMSWIWAGRG*PSSNRV
Trigger: CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA...GATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: PSSNRVMSQNSAPAPSRYTRRPA*WAPSPR
Trigger: TCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGT...ATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: AARSAPSRSSPGSACSTPTRRPA*WAPSPR
Trigger: TCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGT...AGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp AGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGTACTGGCGGCACAGCTaGTCCAGGCGGCACAACTGG +
Preference number: 4 (lower is better)
Translates to: SDVTEFRARSLQVCLHVLYWRHS*SRRHNW
Trigger: CCAGTTGTGCCGCCTGGAGCAGCTGTGCCGCCAGTA...CAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp CGGCGCCCAGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTAATCTGCAGCACGTTCTaGACCGTCACGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: RRPALRTACLRCGRPGSLICSTF*TVTFIS
Trigger: GGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT...TAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCTGCGTTTTGTCAGCTaGCTCCAGGATCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GWPWVPVKQQSDVTEFRALRFVS*LQDLQH
Trigger: GTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAG...GGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp GCGGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGACCTTGGTGAACTGGTaGACAATGATGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AARIALWAGRGCPSSNRVTLVNW*TMMCRQ
Trigger: CTGCCTGCACATCATTGTGCACCAGTTCACCAAGGT...CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp ACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGATGTCCAGCAGCAGCTaGTGGCTCAGCGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: TVTFISRFCLQYACSRLLMSSSS*WLSDRR
Trigger: CCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACAT...CAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGATGTCCAGCAGCAGCTaGTGGCTCAGCGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: PVGVAGATSCGNWVDGCVMSSSS*WLSDRR
Trigger: CCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACAT...CACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR GCA 90 bp CCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCTGGGCAAGGCAGATTCGCTGGTaGAGCGCAAGTCTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: PRRSRCSAAWTRRPACWARQIRW*SASLLS
Trigger: GCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCT...TGCCCAGCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp AGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGGGCCGAGCCCTGACATaGACACAGGTGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SLLSRQGRQARRFFTMGRGRALT*TQVDWD
Trigger: ATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCC...CCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CAGGTAAGGCCACTGACCTACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAACTGGGCGCTGCAGCCTaGACTCCACTTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: QVRPLTYIWGSAKPWAAQLGAAA*TPLPGA
Trigger: AGCACCTGGAAGTGGAGTGCAGGCTGCAGCGCCCAG...TTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGGCCTTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR GCA 90 bp AGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCCACATGGCTGGGCGCTaGAGCCTGCACTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SNRVMSQNSAPAPSRYAFHMAGR*SLHSTS
Trigger: GGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTG...GAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR GCA 90 bp GATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCGGATTTGGAGGAGGCTaGCCTGTGGGTGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DDRRGSASSSAPCGTCVFGFGGG*PVGVAG
Trigger: TCCTGCCACACCCACAGGGCAGCCTCCTCCAAATCC...GAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR GCA 90 bp CCTGGAGGCCAATTGTCCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCCACCACTGTGTGCTTaGTGCGCCGTACCGGGCACC +
Preference number: 4 (lower is better)
Translates to: PGGQLSTCHSTWRCRHSQPPLCA*CAVPGT
Trigger: GGTGCCCGGTACGGCGCAGCAAGCACACAGTGGTGG...CTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACAATTGGCCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443265.5
CDS-3UTR GCA 90 bp GAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTATGGCTACGTGGCCCTaGACGCACTCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: EGDDRRGSASSSAPCGTCMATWP*THSSFS
Trigger: TGAGAAGGAGGAGTGCGTGCAGGGCCACGTAGCCAT...ACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCAGCCTCTCCCGCGCCTaGGTGATCTTCCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVSLSRA*VIFLRS
Trigger: GCTTCGCAGGAAGATCACGCAGGCGCGGGAGAGGCT...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TATTCACGAGGAAGGGGACGTCCTTCACGTTCAGAGGGAGGCCTAGCCAGGGGCAGCTCACACTCCTTGTaGCCTCTCCTGCAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: YSRGRGRPSRSEGGLARGSSHSL*PLLQPH
Trigger: ATGGGGCTGCAGGAGAGGGCACAAGGAGTGTGAGCT...GCCCCTGGCTAGGCCTCCCTCTGAACGTGAAGGACGTCCCCTTCCTCGTGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp AAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTTACACCGTGGCCCCATaGGCTGACCTAGCGACTGGC +
Preference number: 4 (lower is better)
Translates to: KIHSLSLYTVAPWADLATYTVAP*ADLATG
Trigger: GCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTA...AGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GTGGTGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTGTGAGCTCTCGGTCCTaGAGGCCAATTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: VVGSPGAGVQLGCVSTSCVSSRS*RPIVHM
Trigger: CATGTGGACAATTGGCCTCCAGGACCGAGAGCTCAC...ACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CCA 90 bp AGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCAGAAGTTGCAGCAAGATaGGGGGATCTCGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: SECTWPTWLGAAACTPLPEVAAR*GDLATL
Trigger: CAGAGTGGCGAGATCCCCCCATCTTGCTGCAACTTC...TGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR CCA 90 bp GGAAGGGGACGTCCTTCACGTTCAGAGGGAGGCCTAGCCAGGGGCCTCCTCGCCGGTTGTTGGTTATTTTaGCTCCGCTTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GRGRPSRSEGGLARGLLAGCWLF*LRFAQR
Trigger: TCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACC...GGCGAGGAGGCCCCTGGCTAGGCCTCCCTCTGAACGTGAAGGACGTCCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp AGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCAGAGATGCAGTGCTCCTTGAGTTaGCTCAGCTGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: RIPRPLPPGMPSCPGSEMQCSLS*LSCSRA
Trigger: CGCCCGGCTGCAGCTGAGCCAACTCAAGGAGCACTG...CATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACACAGTGCTCCTTGAGTTaGCTCAGCTGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTQCSLS*LSCSRA
Trigger: CGCCCGGCTGCAGCTGAGCCAACTCAAGGAGCACTG...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTGGCCACTGCATGGCCTCTaGTGCCTGCAGACATCACCA +
Preference number: 4 (lower is better)
Translates to: EHGFKVAGAGGQDSLVGWPLHGL*CLQTSP
Trigger: TGGTGATGTCTGCAGGCACCAGAGGCCATGCAGTGG...CCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR CCA 90 bp GAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTCTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: ELVHNDVQAVPLHVQCLRLVGWP*VPVKQQ
Trigger: CTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAG...ACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCGATAGCCTTGTGGGCTaGCCGTGGGTGCCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: SSNRVMSQNSAPAPSRYADSLVG*PWVPVK
Trigger: CTTGACGGGCACCCACGGCCAGCCCACAAGGCTATC...GGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGCCAGGATAGCCTTGTaGGCTGGCCGTGGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVAARIAL*AGRGCP
Trigger: CGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCGCACCATCTCCCCGATaGAGATGTTCACCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GWPWVPVKQQSDVTEFRAAPSPR*RCSPAH
Trigger: ATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGC...GGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TGGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCGCACCATCTCCCCGATaGAGATGTTCACCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: WLPALEWIHMGPSLGQEGAPSPR*RCSPAH
Trigger: ATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGC...GCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCAGATGTAGCGCAGCATaGACTCGAAGGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VGWPWVPVKQQSDVTEFRRCSAA*TRRPAC
Trigger: GCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCT...GCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TCTCCCCACTTCTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACATCCAGGCGGCACAACTaGAAGCTCAGTGCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SPHFWVVSPSLSRGLASTSRRHN*KLSASL
Trigger: CAAACTGGCACTGAGCTTCCAGTTGTGCCGCCTGGA...TGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAGAAGTGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGTCAGCGACCGCAGGGTaGGCAACTTGGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: RHVDLAVVDVAQHGLEGLSATAG*ATWRPW
Trigger: CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGA...CAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GAGAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTCTCTCCCCACTTCTaGGTGGTGAGCCCATCACTG +
Preference number: 4 (lower is better)
Translates to: ERVMTGGGLLHHPLPVGPVSPHF*VVSPSL
Trigger: CAGTGATGGGCTCACCACCCAGAAGTGGGGAGAGAC...AGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCCCAAGCCCCACTGGGTaGGAGGCCCAAAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AYTQRRAGHFPKELWLHGPSPTG*EAQSLS
Trigger: GGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTGG...GCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp AGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCCAGGCCAAGCCCCACTaGGTGGGAGGCCCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SNRVMSQNSAPAPSRYAFQAKPH*VGGPKS
Trigger: AGACTTTGGGCCTCCCACCCAGTGGGGCTTGGCCTG...GAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CACACACCTGCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCAGGCCAAGCCCCACTaGGTGGGAGGCCCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: HTPAYTQRRAGHFPKELWQAKPH*VGGPKS
Trigger: AGACTTTGGGCCTCCCACCCAGTGGGGCTTGGCCTG...CCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGCAGGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp ATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGCCTCCTCCCGCATGTTaGAGGAGCCTTGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: IALWAGRGCPSSNRVMSQPPPAC*RSLGDR
Trigger: CCTGTCACCAAGGCTCCTCCAACATGCGGGAGGAGG...CTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp GTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTTCAATTTTCCACTCCCCTCCTCCCGCATGTTaGAGGAGCCTTGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: VAPWADLATGNRPSIFHSPPPAC*RSLGDR
Trigger: CCTGTCACCAAGGCTCCTCCAACATGCGGGAGGAGG...GGAGTGGAAAATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGCCCTGAGGAGCCCCTTACATaGATCTCAGTGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PALEWIHMGPSLGQEGSPEEPLT*ISVRVG
Trigger: ACCCACCCTCACTGAGATCCATGTAAGGGGCTCCTC...AGGGCTGCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGGGTCTGCTAAGCCATaGGCTGCTCAAGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VLGRHVDLAVVDVAQHGLGSAKP*AAQGAE
Trigger: TTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCC...GAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCCCATCACCACTGACCTACATCTaGGGGTCTGCTAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: PLGGRPKVSPHFWVVSPSPLTYI*GSAKPW
Trigger: CCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGG...TGATGGGCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp AGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACCTTCCCAATGTGACTaGGTGACCCCAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RIALWAGRGCPSSNRVMSPSQCD*VTPGGG
Trigger: GCCTCCACCTGGGGTCACCCAGTCACATTGGGAAGG...TGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp AGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTATGATGTCCTGGAAGGGGCCAGCCTaGAGGCCTTCACAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSAHCLSEMWEARESMMSWKGPA*RPSQPF
Trigger: GAAGGGCTGTGAAGGCCTCCAGGCTGGCCCCTTCCA...GGACATCATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGTGGAAGGGGCCAGCCTaGAGGCCTTCACAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PVGVAGATSCGNWVDGCVWKGPA*RPSQPF
Trigger: GAAGGGCTGTGAAGGCCTCCAGGCTGGCCCCTTCCA...CACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp GCACCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCCTCCCAGCACTAGAGTaGATCCACATGGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: APTAIGMRIAGSLLSRQGLPALE*IHMGPS
Trigger: TGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAG...GCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGACAAGAAAGGGGTCCTaGAATCCTGTTCCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: PWAAQGAEASSGGRASKVTRKGS*NPVPSK
Trigger: CTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGT...CACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCACAAGAAAGGGGTCCTaGAATCCTGTTCCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: RQGRQARRFFTMGRRHRATRKGS*NPVPSK
Trigger: CTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGT...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCCCCCAGCCATGGTCCTaGGCCTGCTGTGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: VHNDVQAVPLHVQCLRFVPQPWS*ACCVLT
Trigger: GGTGAGGACACAGCAGGCCCAGGACCATGGCTGGGG...GACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR CCA 90 bp CAGGAGTTGACAGCATGGATAGAGACAGGTAAGGCCACTGACCTACATCTGGGGCCTGGCCCACATGGCTaGGCGCTGCAGCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: QELTAWIETGKATDLHLGPGPHG*ALQPAL
Trigger: GAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGG...CCCCAGATGTAGGTCAGTGGCCTTACCTGTCTCTATCCATGCTGTCAACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp AAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGACATCTTGTGGAAACTaGGTAGATGGGTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KPWAAQGAEASSGGRASKTSCGN*VDGCVA
Trigger: GGCCACACACCCATCTACCCAGTTTCCACAAGATGT...CTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp GCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCGAGGAGGCTGCCCTGTaGGTGTGGCAGGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: AYTQRRAGHFPKELWLHGEEAAL*VWQEPH
Trigger: ATGTGGCTCCTGCCACACCCACAGGGCAGCCTCCTC...GCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp AGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGAGCAGTGCAGCTCGTTaGGCAGCGTGTTGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: SDVTEFRARSLQVCLHVLSSAAR*AACCRP
Trigger: CGGCCGACAACACGCTGCCCAACGAGCTGCACTGCT...CAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CAGGTAAGGCCACTGACCTACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAAGCAGTGCAGCTCGTTaGGCAGCGTGTTGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: QVRPLTYIWGSAKPWAAQSSAAR*AACCRP
Trigger: CGGCCGACAACACGCTGCCCAACGAGCTGCACTGCT...TTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGGCCTTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CCTGCAGGCCCCTCTGGTCTTCTGCCATTATTTGAGATCTATGCAGGCCACGTCCTGTCGGAGCTGGGCTaGACGACCTCCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PAGPSGLLPLFEIYAGHVLSELG*TTSQVW
Trigger: CCAGACCTGGGAGGTCGTCCAGCCCAGCTCCGACAG...GACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp GAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGCTGCTTGGCTGAGGTaGTGCCAAAGTCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: EGDDRRGSASSSAPCGTCAAWLR*CQSPGQ
Trigger: TTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGC...ACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGAGCAGGGTTGCAGACTaGTTCAAGGAGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GTLLASSRPSPDMHTGGLSRVAD*FKEASG
Trigger: CCCAGAAGCCTCCTTGAACCAGTCTGCAACCCTGCT...CAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR CCA 90 bp GTGGGCTGCTTGGCTGAGGTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACTGTGCCAATGTCCACTaGCTGGTCCAAGGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: VGCLAEVVPKSRPNTSRDCANVH*LVQGSA
Trigger: CGCACTCCCTTGGACCAGCCAGTGGACATTGGCACA...GTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CCTGCAGGCCCCTCTGGTCTTCTGCCATTATTTGAGATCTATGCAGGCCACGTCGGAAGAGCCTCCCACTaGGCAGCTCCGAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PAGPSGLLPLFEIYAGHVGRASH*AAPRQA
Trigger: AGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCC...GACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR CAA 72 bp TGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTaGTCAGCTGCCTCCAGGATCTGCAGCACGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CRQCRFMSSACV*SAASRICSTFC
Trigger: GCAGAACGTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp AAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGCTTTCCGTGGGTATTTaGTCTTGTCGGTGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: KPWAAQGAEASSGGRASKLSVGI*SCRCRG
Trigger: TCCTCTACACCGACAAGATCAAATACCCACGGAAAG...CTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCTCAGGCAGTGCTCCTTaGGTTGGCTCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVSGSAP*VGSAAA
Trigger: GGCTGCAGCTGAGCCAACTCAAGGAGCACTGCCTGA...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp TGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCTCAGGCAGTGCTCCTTaGGTTGGCTCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: WQPQQERGPGILFPVRERSGSAP*VGSAAA
Trigger: GGCTGCAGCTGAGCCAACTCAAGGAGCACTGCCTGA...GCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATCAGAGATGTGCCTCATaGTCAAGCCCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSSNRVMSQNSAPAPSRYQRCAS*SSPLQA
Trigger: GGCCTGGAGGGGGCTTGATCATGAGGCACATCTCTG...ATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR TCA 90 bp CAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGCGTCAAGCAACAGAGTaGTGTCACAGAATTCCGCGC +
Preference number: 4 (lower is better)
Translates to: QLLAQRPQGGQLGDLGELRQATE*CHRIPR
Trigger: GCGCGGAATTCTGTGACATCACTCTGTTGCTTGACG...CAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGT +
Preference number: 4 (lower is better)
Translates to: HVDLAVVDVAQHGLEGLPPRAAC*PRRSRC
Trigger: ACATCTACTACGGCGAGGTCAACATGCCGCCCGAGG...AGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGTCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGT +
Preference number: 4 (lower is better)
Translates to: PSRSSPGSACSTPAAGCCPRAAC*PRRSRC
Trigger: ACATCTACTACGGCGAGGTCAACATGCCGCCCGAGG...ACAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGT +
Preference number: 4 (lower is better)
Translates to: PVGVAGATSCGNWVDGCVPRAAC*PRRSRC
Trigger: ACATCTACTACGGCGAGGTCAACATGCCGCCCGAGG...CACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR TCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACATGCGCACTGCTTGTCTaGGATGTGGGAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTCALLV*DVGGQG
Trigger: TCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCA...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp GAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGACAGGCCCCAGTGCCTaGGTCCACAACACGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EMFTCPSSGMKDRNMASKTGPSA*VHNTPR
Trigger: CCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGT...CTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR TCA 90 bp CCCAGCTCATCTTGCACTAGGCCACTTCCTAGCCTGCAGGCTGCCTATGGATCTTGGCCCCACTCTGAGTaGATGCACCTGGCCCACATG +
Preference number: 4 (lower is better)
Translates to: PSSSCTRPLPSLQAAYGSWPHSE*MHLAHM
Trigger: CATGTGGGCCAGGTGCATTCACTCAGAGTGGGGCCA...AGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR TCA 90 bp GTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCTGTGTGGCCCCACTCTaGGTGAATGCACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: VNWCTMMCRQCRFMSSACCVAPL*VNAPGP
Trigger: TGGGCCAGGTGCATTCACTCAGAGTGGGGCCACACA...GCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR TCA 90 bp CAGGAGTTGACAGCATGGATAGAGACAGGTAAGGCCACTGACCTACATCTGGGGAGCGGCTCCGCGCTGTaGCAATGGCTACGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QELTAWIETGKATDLHLGSGSAL*QWLRGP
Trigger: AGGGCCACGTAGCCATTGTCACAGCGCGGAGCCGCT...CCCCAGATGTAGGTCAGTGGCCTTACCTGTCTCTATCCATGCTGTCAACTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp ACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGTGTAGAGGAACTGCATaGGCACCTCGAAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: TVTFISRFCLQYACSRLLCRGTA*APRRAG
Trigger: CCCGGCCCTTCGAGGTGCTCATGCAGTTCCTCTACA...CAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp CAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATTTGAGTTGGCTCAGCTaGAGCCGGGCGGCACTCTCG +
Preference number: 4 (lower is better)
Translates to: QQSDVTEFRARSLQVCLHLSWLS*SRAALS
Trigger: CGAGAGTGCCGCCCGGCTGCAGCTGAGCCAACTCAA...ATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp ATCTCCACTATCAGTGGAGAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATC +
Preference number: 4 (lower is better)
Translates to: ISTISGEERRSNSFIMITVRGGG*CFRRTI
Trigger: GATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCAC...GGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp GTAGAGCGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGATGGCCTCTGGTGCCTaGAGACATCACCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: VERVLGRHVDLAVVDVAQMASGA*RHHQEP
Trigger: TGGCTCTTGGTGATGTCTGCAGGCACCAGAGGCCAT...CTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000439171.5
CDS-3UTR GCA 90 bp CGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTGCATGGCCTCTGGTaGCTGCAGACATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: RVLGRHVDLAVVDVAQHGLHGLW*LQTSPR
Trigger: TCTTGGTGATGTCTGCAGGCACCAGAGGCCATGCAG...TCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR GCA 90 bp TGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTACTGGCGGCACAGCTaGTCCAGGCGGCACAACTGG +
Preference number: 4 (lower is better)
Translates to: WCTMMCRQCRFMSSACVLYWRHS*SRRHNW
Trigger: CCAGTTGTGCCGCCTGGAGCAGCTGTGCCGCCAGTA...CAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp GGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGATCTGCAGCACGTTCTaGACCGTCACGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: GTLLASSRPSPDMHTGGLICSTF*TVTFIS
Trigger: GGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT...CAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TGGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCTTCATGTCCAGTGCCTaGGTTTTGTCAGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: WLPALEWIHMGPSLGQEGFMSSA*VLSAAS
Trigger: GGAGGCAGCTGACAAAACGCAGGCACTGGACATGAA...GCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGATGATGTGCAGGCAGTaGCGCTTCATGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FGHEGPEHGFKVAGAGGQMMCRQ*RFMSSA
Trigger: GGCACTGGACATGAAGCGGCACTGCCTGCACATCAT...CTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp AGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTATGATGTGCAGGCAGTaGCGCTTCATGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SLSLYTVAPWADLATGNRMMCRQ*RFMSSA
Trigger: GGCACTGGACATGAAGCGGCACTGCCTGCACATCAT...ACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp CAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGTGGTGCACAATGATGTaGAGGCAGTGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: QLLAQRPQGGQLGDLGELWCTMM*RQCRFM
Trigger: CATGAAGCGGCACTGCCTGCACATCATTGTGCACCA...CAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp AGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCGGCAGGTGCACCCACTaGCATAGGCATGCGCATAGC +
Preference number: 4 (lower is better)
Translates to: SNRVMSQNSAPAPSRYAFGRCTH*HRHAHS
Trigger: GCTATGCGCATGCCTATGGCAGTGGGTGCACCTGCC...GAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp ACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGCCTTGGCCTGGCAGGTaGACCCACTGCCATAGGCAT +
Preference number: 4 (lower is better)
Translates to: TVTFISRFCLQYACSRLLPWPGR*THCHRH
Trigger: ATGCCTATGGCAGTGGGTGCACCTGCCAGGCCAAGG...CAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GCCCAGGCAGATTCGCTGGTGCAGCGCAAGTCTGCTAAGCCTCCTCCCGCATGTGTTCCCAGCTCATCTTaGACTAGGCCACTTCCTAGC +
Preference number: 4 (lower is better)
Translates to: AQADSLVQRKSAKPPPACVPSSS*TRPLPS
Trigger: GCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGGAAC...ACATGCGGGAGGAGGCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp AGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCAGAGATGCCATGGTCCTGGGCCTaGTGTGTCCTCACCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RIPRPLPPGMPSCPGSEMPWSWA*CVLTSR
Trigger: CCTTGAGGTGAGGACACAGCAGGCCCAGGACCATGG...CATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR GCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACACCATGGTCCTGGGCCTaGTGTGTCCTCACCTCAAGG +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTPWSWA*CVLTSR
Trigger: CCTTGAGGTGAGGACACAGCAGGCCCAGGACCATGG...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR GCA 90 bp GGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACTTTGCTGGCTTCCACATGGCTGGGCGCTaGAGCCTGCACTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: GLSVTEYSARDTGDFAGFHMAGR*SLHSTS
Trigger: GGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTG...GAAGCCAGCAAAGTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR GCA 90 bp GGAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGCAGGCTGGGTGGGCTaGTTGGCTGAGGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GDVHLPIFGHEGPEHGFKAGWVG*LAEVVP
Trigger: TGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGC...TTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp CAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGCCTGGATCAGAGATGTaGCAATGTCCACTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QLLAQRPQGGQLGDLGELPGSEM*QCPLAG
Trigger: ACCAGCCAGTGGACATTGGCACATCTCTGATCCAGG...CAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp GGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGCCTGGATCAGAGATGTaGCAATGTCCACTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GTLLASSRPSPDMHTGGLPGSEM*QCPLAG
Trigger: ACCAGCCAGTGGACATTGGCACATCTCTGATCCAGG...CAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGCCCTTGTTGTTGTCCACCGTaGCCCCGAAGATGTACATGG +
Preference number: 4 (lower is better)
Translates to: PALEWIHMGPSLGQEGSPCCCPP*PRRCTW
Trigger: CCATGTACATCTTCGGGGGCACGGTGGACAACAACA...AGGGCTGCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTTGTACATCTCCCCGCTaGGGATGTTGTTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: EGDDRRGSASSSAPCGTCCTSPR*GCCCPP
Trigger: CGGTGGACAACAACATCCGCAGCGGGGAGATGTACA...ACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp AGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGATGGCTACGTGGCCCTaGACGCACTCCTCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLLSRQGRQARRFFTMGRMATWP*THSSFS
Trigger: TGAGAAGGAGGAGTGCGTGCAGGGCCACGTAGCCAT...CCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGTAACCCCCAAAGACAAACATGCTGCTCCCATAGACGACGGCCGAGTGGTGGTTACACCGTGGCCCCATaGGCTGACCTAGCGACTGGC +
Preference number: 4 (lower is better)
Translates to: CNPQRQTCCSHRRRPSGGYTVAP*ADLATG
Trigger: GCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTA...ACCACCACTCGGCCGTCGTCTATGGGAGCAGCATGTTTGTCTTTGGGGGTTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443265.5
CDS-3UTR CCA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACGGGATCTCGCCACTCTaGGCCACCTCCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDGISPL*ATSSQQ
Trigger: CTGCTGGGAGGAGGTGGCCCAGAGTGGCGAGATCCC...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGGAGCAGGTGTTCAGTTaGGATGCGTGTCCACGTCTT +
Preference number: 4 (lower is better)
Translates to: GEPRSRCSVGMRVHVLSLEQVFS*DACPRL
Trigger: AAGACGTGGACACGCATCCCAACTGAACACCTGCTC...CAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTCCAATGTCCACTGGCTaGTCCAAGGGAGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: ELVHNDVQAVPLHVQCLRPMSTG*SKGVRG
Trigger: CCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGG...ACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGCGAAGGCCTGCCTGCTaGGCACCATCTCCCCGATGG +
Preference number: 4 (lower is better)
Translates to: EMFTCPSSGMKDRNMASKRRPAC*APSPRW
Trigger: CCATCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCG...CTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CTGACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATAGGGCACCCTGACCCTTaGCCTGGCAGGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: LTSGPFTPKFTSSQVRPIGHPDP*PGRCTH
Trigger: GTGGGTGCACCTGCCAGGCCAAGGGTCAGGGTGCCC...TATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp ACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTTCAATTTTCCACCCCATCACTGAGCCGTaGCCTCGCATCCACACTACA +
Preference number: 4 (lower is better)
Translates to: TVAPWADLATGNRPSIFHPITEP*PRIHTT
Trigger: TGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGG...GTGGAAAATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GTGGGCAACTTGGAGACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCAGGCCAAGCCCCACTaGGTGGGAGGCCCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: VGNLETLVNWCTMMCRQCQAKPH*VGGPKS
Trigger: AGACTTTGGGCCTCCCACCCAGTGGGGCTTGGCCTG...GCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp TTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCCTCACAAGTTCCAGGTaGGAAGAGGAGCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: LLASSRPSPDMHTGGLGSLTSSR*EEEPLT
Trigger: TGTAAGGGGCTCCTCTTCCCACCTGGAACTTGTGAG...GGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCTGTGAAAACCAGGCCTaGCCCAGCACGACCGACCTG +
Preference number: 4 (lower is better)
Translates to: WQPQQERGPGILFPVRERCENQA*PSTTDL
Trigger: CAGGTCGGTCGTGCTGGGCCAGGCCTGGTTTTCACA...GCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CCCAGCTCATCTTGCACTAGGCCACTTCCTAGCCTGCAGGCTGCCTATGGATCTCTGAGTGAATGCACCTaGCCCACATGGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: PSSSCTRPLPSLQAAYGSLSECT*PTWLGA
Trigger: AGCGCCCAGCCATGTGGGCCAGGTGCATTCACTCAG...AGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp CCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGTGGAAACTGGGTAGATaGGTGTGTGGCCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: PTAIGMRIAGSLLSRQGRWKLGR*VCGPTL
Trigger: CAGAGTGGGGCCACACACCCATCTACCCAGTTTCCA...CCTGCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp GTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCATGTCCAATGTCCACTaGCTGGTCCAAGGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: VLGRHVDLAVVDVAQHGLMSNVH*LVQGSA
Trigger: CGCACTCCCTTGGACCAGCCAGTGGACATTGGACAT...GAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452988.5
CDS-3UTR CCA 90 bp TGCCAGTTTGTACACATCCATGATGAGCAGCACATCCTCCACATGGCCTTTCCGCCTCGCTGTCGGAGCTaGGCTGGACGACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CQFVHIHDEQHILHMAFPPRCRS*AGRPPR
Trigger: CCTGGGAGGTCGTCCAGCCCAGCTCCGACAGCGAGG...CGGAAAGGCCATGTGGAGGATGTGCTGCTCATCATGGATGTGTACAAACTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTGGTCAAAGGCCACCATaGTATGCCCGTAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: ELVHNDVQAVPLHVQCLRGQRPP*YARSAA
Trigger: AGCGGCGCTACGGGCATACCATGGTGGCCTTTGACC...ACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CACACACCTGCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGGGTCAAAGGCCACCATaGTATGCCCGTAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: HTPAYTQRRAGHFPKELWGQRPP*YARSAA
Trigger: AGCGGCGCTACGGGCATACCATGGTGGCCTTTGACC...CCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGCAGGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp AGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGCCCATCTTCGGGCATaGAGGACCGGAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: SDVTEFRARSLQVCLHVLAHLRA*RTGTWL
Trigger: AAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGC...CAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR TCA 90 bp ATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCGCCCATCTTCGGGCATaGAGGACCGGAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: MMCRQCRFMSSACVLSAAAHLRA*RTGTWL
Trigger: AAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGC...GGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAGCCCATCTTCGGGCATaGAGGACCGGAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTAHLRA*RTGTWL
Trigger: AAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGC...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCAGGCCAGGGAGTCTATaGTGTCCAGCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVRPGSL*CPAAAA
Trigger: AGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCT...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp AGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGAGGCCAGGGAGTCTATaGTGTCCAGCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SDVTEFRARSLQVCLHVLRPGSL*CPAAAA
Trigger: AGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCT...CAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR TCA 90 bp TCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTTTGGGGCCCCACTGCGCACTGCTTGTCTaGGATGTGGGAGGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SAPCGTCVFSELMSLGPHCALLV*DVGGQG
Trigger: TCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCA...GTGGGGCCCCAAACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCGACCTGTGTCTTCAGTaGATTAATGAGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSDLCLQ*INEFGA
Trigger: GGCCCCAAACTCATTAATTCACTGAAGACACAGGTC...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp TGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGGTGCTCACCTCAAGTCAGGTaGGACCCATACATCATGGGT +
Preference number: 4 (lower is better)
Translates to: CWLSDRRVGNLETLVNWCSPQVR*DPYIMG
Trigger: ACCCATGATGTATGGGTCTCACCTGACTTGAGGTGA...GCACCAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR TCA 90 bp TGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGGTGCATGGAGGCTTGTCTGTaGCAGAATACTCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: CWLSDRRVGNLETLVNWCMEACL*QNTQQG
Trigger: CCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCAT...GCACCAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp TGTCCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGAGGCGCCGCCAGCGATaGACTGTTTCGAAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: CPHVIQPGVAVIASKDPQRRRQR*TVSKGP
Trigger: CGGGCCCTTCGAAACAGTGCATCGCTGGCGGCGCCT...CTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GAGAATACAAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCAGCAAGATCCACCACTGTGTGCTTaGTGCGCCGGGCACCCACGA +
Preference number: 4 (lower is better)
Translates to: ENTNILSRHTATGKLQQDPPLCA*CAGHPR
Trigger: TCGTGGGTGCCCGGCGCAGCAAGCACACAGTGGTGG...ATCTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GCCCAGGCAGATTCGCTGGTGCAGCGCAAGTCTGCTAAGCCTCCTCCCGCATGTCATTCAACCTGGCGTTaGCGTCATAGCCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: AQADSLVQRKSAKPPPACHSTWR*RHSQQR
Trigger: TCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATG...ACATGCGGGAGGAGGCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGACATTCAACCTGGCGTTaGCGTCATAGCCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LGGEPITEPWPRIHTTPGHSTWR*RHSQQR
Trigger: TCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATG...TCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGGTGTTCAGTTGGGATaGGTGTCCACGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: WGAPEQVFSWDACPRLVLGVQLG*VSTSCP
Trigger: AGGACAAGACGTGGACACGCATCCCAACTGAACACC...AAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTTGAGTTGGCTCAGCTaGAGCCGGGCGGCACTCTCG +
Preference number: 4 (lower is better)
Translates to: EMFTCPSSGMKDRNMASKLSWLS*SRAALS
Trigger: CGAGAGTGCCGCCCGGCTGCAGCTGAGCCAACTCAA...CTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCCCTGGATCAGAGATGTaGCTCATGATCAAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VGWPWVPVKQQSDVTEFRPGSEM*LMIKPP
Trigger: AGGGGGCTTGATCATGAGGCACATCTCTGATCCAGG...GCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR GCA 90 bp ATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCGCTCCCTCCAGGTATaGCTTCATGTCCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: IFGHEGPEHGFKVAGAGGRSLQV*LHVLDQ
Trigger: CTGATCCAGGACATGAAGGCATACCTGGAGGGAGCG...GCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp AGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACGCTCCCTCCAGGTATaGCTTCATGTCCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: RIALWAGRGCPSSNRVMSRSLQV*LHVLDQ
Trigger: CTGATCCAGGACATGAAGGCATACCTGGAGGGAGCG...TGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGATGGAGATGTTCACCTaGCCATCTTCGGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: ARIALWAGRGCPSSNRVMMEMFT*PSSGMK
Trigger: CTTCATGCCCGAAGATGGGCAGGTGAACATCTCCAT...CATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGATGGACTCGAAGGCCTaGCTGCTGGGCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: SAARSAPSRSSPGSACSTMDSKA*LLGTIS
Trigger: GGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCAT...CGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATATGGACTCGAAGGCCTaGCTGCTGGGCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: QQSDVTEFRARSLQVCLHMDSKA*LLGTIS
Trigger: GGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCAT...ATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCACAACCAGCACGTTCTaGAGGTCCACGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VHNDVQAVPLHVQCLRFVTTSTF*RSTEAS
Trigger: CGAGGCCTCCGTGGACCTGCAGAACGTGCTGGTTGT...GACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp AGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RRGSASSSAPCGTCVFSESPGSA*STPAAG
Trigger: ACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGA...TTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGTTCATCTCCAGGTTCTaGTTGCAGTACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTAIGMRIAGSLLSRQGRFISRF*LQYACS
Trigger: GCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAA...CCTGCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATTTCATCTCCAGGTTCTaGTTGCAGTACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LCWLLPGRALTCTQVDWDFISRF*LQYACS
Trigger: GCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAA...ATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp ATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCTGCGTTTTGTCAGCTaGCTCCAGGATCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: IFGHEGPEHGFKVAGAGGLRFVS*LQDLQH
Trigger: GTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAG...GCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp AGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCAGAGATGCCCAGCTCTGCGCACTaGTTGTCTGAGATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RIPRPLPPGMPSCPGSEMPSSAH*LSEMWE
Trigger: CTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGG...CATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp CACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGCCCAGCTCTGCGCACTaGTTGTCTGAGATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HFPKELWLHGSHNKKGVLPSSAH*LSEMWE
Trigger: CTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGG...CAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAAAGGCAGATTCGCTGGTaGAGCGCAAGTCTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: GAPEQVFSWDACPRLVLERQIRW*SASLLS
Trigger: GCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCT...TTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp GACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGGGCCGAGCCCTGACATaGACACAGGTGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: DLGELVHNDVQAVPLHVQGRALT*TQVDWD
Trigger: ATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCC...CTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp AGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCCCAAAGACAAACATaGTGCTCCCATAGACGACGG +
Preference number: 4 (lower is better)
Translates to: SLSLYTVAPWADLATGNRPQRQT*CSHRRR
Trigger: CCGTCGTCTATGGGAGCAGCATGTTTGTCTTTGGGG...ACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443265.5
CDS-3UTR GCA 90 bp CAGTGCCAGTTTGTACACATCCATGATGAGCAGCACATCCTCCACATGGCCTTTACTGGGGCGGCCTCCTaGTCCAGCTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QCQFVHIHDEQHILHMAFTGAAS*SSFWAS
Trigger: GCTGGCCCAGAAGCTGGAGCAGGAGGCCGCCCCAGT...AAAGGCCATGTGGAGGATGTGCTGCTCATCATGGATGTGTACAAACTGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp GTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACTTCTTGAAGCCAACCCGCGGATGCGTGTCCACCTaGAGCTCACACTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VVPKSRPNTSRDFLKPTRGCVST*SSHSLC
Trigger: GCACAAGGAGTGTGAGCTGCAGGTGGACACGCATCC...GCGGGTTGGCTTCAAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR GCA 90 bp GGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGCTCACACTCCTTGTGCGGTGTTCAGTTGGGATaGGTGTCCACCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GAGVQLGCVSTCSSHSLCGVQLG*VSTCSS
Trigger: TGAGCTGCAGGTGGACACGCATCCCAACTGAACACC...GCACAAGGAGTGTGAGCTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp CCTGGAGGCCAATTGTCCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCTGTCCGAGCAGCTATaGTCGAAGTCCACGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PGGQLSTCHSTWRCRHSQLSEQL*SKSTLG
Trigger: CCCGAGCGTGGACTTCGACCATAGCTGCTCGGACAG...CTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACAATTGGCCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000443265.5
CDS-3UTR CCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTTACACCGTGGCCCCATaGGCTGACCTAGCGACTGGC +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVAYTVAP*ADLATG
Trigger: GCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTA...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CACAGGCTCGCTCGGGCACTTCAGCCCCACCAACCTCGCTGTCGGAGCTGGGCTACTGGAAGAGGTTGTTaGTTATTTTGGCTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: HRLARALQPHQPRCRSWATGRGC*LFWLRF
Trigger: AAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGT...AGCCCAGCTCCGACAGCGAGGTTGGTGGGGCTGAAGTGCCCGAGCGAGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGAGCAGGTGTTCAGTTaGGATGCGTGTCCACGTCTT +
Preference number: 4 (lower is better)
Translates to: EGDDRRGSASSSAPCGTCEQVFS*DACPRL
Trigger: AAGACGTGGACACGCATCCCAACTGAACACCTGCTC...ACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp ACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGAGCAGGTGTTCAGTTaGGATGCGTGTCCACGTCTT +
Preference number: 4 (lower is better)
Translates to: TSGGLLSHGLLKGLKPAVEQVFS*DACPRL
Trigger: AAGACGTGGACACGCATCCCAACTGAACACCTGCTC...CACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGCCAATGTCCACTGGCTaGTCCAAGGGAGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: WCTMMCRQCRFMSSACVLPMSTG*SKGVRG
Trigger: CCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGG...CAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATCCACTGCATGGCCTCTaGTGCCTGCAGACATCACCA +
Preference number: 4 (lower is better)
Translates to: PSSNRVMSQNSAPAPSRYPLHGL*CLQTSP
Trigger: TGGTGATGTCTGCAGGCACCAGAGGCCATGCAGTGG...ATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR CCA 90 bp GAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGCTTGTGGGCTGGCCGTaGGTGCCCGTCAAGCAACAG +
Preference number: 4 (lower is better)
Translates to: EMFTCPSSGMKDRNMASKLVGWP*VPVKQQ
Trigger: CTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAG...CTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CCCAGCTCATCTTGCACTAGGCCACTTCCTAGCCTGCAGGCTGCCTATGGATCTAGATGTAGCGCAGCATaGACTCGAAGGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSSSCTRPLPSLQAAYGSRCSAA*TRRPAC
Trigger: GCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCT...AGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGAGATGTAGCGCAGCATaGACTCGAAGGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPIFGHEGPEHGFKVAGARCSAA*TRRPAC
Trigger: GCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCT...CGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp ATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGAGGCCTCGATGTACTaGCGGCACAGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ICSTFCTVTFISRFCLQYEASMY*RHSCSR
Trigger: CCTGGAGCAGCTGTGCCGCCAGTACATCGAGGCCTC...GTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp ATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCATGATCACCTTGAGTTaGCTCAGCTGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: MSQNSAPAPSRYAFMSWIMITLS*LSCSRA
Trigger: CGCCCGGCTGCAGCTGAGCCAACTCAAGGTGATCAT...GATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR CCA 90 bp CTGCAGCCGGTTGTTGTAGAAGCCGTAGTAGTAGGGGGCCGCAAACAAGTAGAGTCAGCGACCGCAGGGTaGGCAACTTGGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LQPVVVEAVVVGGRKQVESATAG*ATWRPW
Trigger: CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGA...CTCTACTTGTTTGCGGCCCCCTACTACTACGGCTTCTACAACAACCGGCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCCCCATCACTGAGCCGTaGCCTCGCATCCACACTACA +
Preference number: 4 (lower is better)
Translates to: AYTQRRAGHFPKELWLHGPITEP*PRIHTT
Trigger: TGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGG...GCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGGACTCACAAGTTCCAGGTaGGAAGAGGAGCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: AGSAASCPVPAFCQLPPGLTSSR*EEEPLT
Trigger: TGTAAGGGGCTCCTCTTCCCACCTGGAACTTGTGAG...TCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGTGAACTGGAGACCCATACATCATaGGTCCCCACTCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: QLLAQRPQGGQLGDLGELETHTS*VPTHKF
Trigger: GAACTTGTGAGTGGGGACCCATGATGTATGGGTCTC...CAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp TTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCGAGACCCATACATCATaGGTCCCCACTCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: LLASSRPSPDMHTGGLGSETHTS*VPTHKF
Trigger: GAACTTGTGAGTGGGGACCCATGATGTATGGGTCTC...GGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGTAGAAGCCGTATGTGAAAACCAGGCCTaGCCCAGCACGACCGACCTG +
Preference number: 4 (lower is better)
Translates to: HLQVLLAVRLQPVVVEAVCENQA*PSTTDL
Trigger: CAGGTCGGTCGTGCTGGGCCAGGCCTGGTTTTCACA...TACGGCTTCTACAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCCTCCCAGCACTAGAGTaGATCCACATGGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVLPALE*IHMGPS
Trigger: TGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAG...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGGAGCTGTGGCTTCATaGCAGCCACAACAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: EGDDRRGSASSSAPCGTCGAVAS*QPQQER
Trigger: CCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCC...ACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGGGGAGCTGTGGCTTCATaGCAGCCACAACAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: CRQCRFMSSACVLSAASRGAVAS*QPQQER
Trigger: CCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCC...CCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACTACACCAGGAAGGAGCCACATCTTGTaGAAACTGGGTAGATGGGTG +
Preference number: 4 (lower is better)
Translates to: LGGEPITEPWPRIHTTPGRSHIL*KLGRWV
Trigger: CACCCATCTACCCAGTTTCCACAAGATGTGGCTCCT...TCCTGGTGTAGTGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp GCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCTGTGCCAATGTCCACTaGCTGGTCCAAGGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: AYTQRRAGHFPKELWLHGCANVH*LVQGSA
Trigger: CGCACTCCCTTGGACCAGCCAGTGGACATTGGCACA...GCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACATGACAGCAGCCGCGTaGAAGAGCCTCCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDMTAAA*KSLPLG
Trigger: GCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTCAT...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTTTGGGGCCCCACGTGACAATGGCTACGTaGCCCTGCACGCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAPCGTCVFSELMSLGPHVTMAT*PCTHSS
Trigger: GGAGGAGTGCGTGCAGGGCCACGTAGCCATTGTCAC...GTGGGGCCCCAAACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGGCTGGACGACCTCCCAGGTCTGGAAGTCCACGTCATAGCAGTGCAGCTCGTTCAGAGCTCACAAGGATaGTTACCATGGCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GLDDLPGLEVHVIAVQLVQSSQG*LPWPPG
Trigger: ACCTGGTGGCCATGGTAACCATCCTTGTGAGCTCTG...AACGAGCTGCACTGCTATGACGTGGACTTCCAGACCTGGGAGGTCGTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR CAA 72 bp AACTGGAACCTGTACATCTCCCCGCTGCGGATGTTGTaGTCCACCGTGCCCCCGAAGATGTACATGGCGTCC +
Preference number: 4 (lower is better)
Translates to: NWNLYISPLRML*STVPPKMYMAS
Trigger: GGACGCCATGTACATCTTCGGGGGCACGGTGGACAACAACATCCGCAGCGGGGAGATGTACAGGTTCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp CCCCAAAGACAAACATGCTGCTCCCATAGACGACGGCCGAGTGGTGGTAACGGGACCGCAGGAGGTCATTaGGCATGGTCTTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: PQRQTCCSHRRRPSGGNGTAGGH*AWSSHC
Trigger: ACAATGGGAAGACCATGCTCAATGACCTCCTGCGGT...CCCGTTACCACCACTCGGCCGTCGTCTATGGGAGCAGCATGTTTGTCTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443265.5
CDS-3UTR TCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTCAGAGATGTGCCTCATaGTCAAGCCCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVAQRCAS*SSPLQA
Trigger: GGCCTGGAGGGGGCTTGATCATGAGGCACATCTCTG...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR TCA 90 bp TCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGAGGCCAGGGAGTCTATaGTGTCCAGCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAARSAPSRSSPGSACSTRPGSL*CPAAAA
Trigger: AGCAGCTGCTGCTGGACATCATAGACTCCCTGGCCT...CGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp TCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGACCTGTGTCTTCAGTaGATTAATGAGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SVGRAGRHGDSSQWAGATDLCLQ*INEFGA
Trigger: GGCCCCAAACTCATTAATTCACTGAAGACACAGGTC...TGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp GAGAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTTCACCTCAAGTCAGGTaGGACCCATACATCATGGGT +
Preference number: 4 (lower is better)
Translates to: ERVMTGGGLLHHPLPVGPSPQVR*DPYIMG
Trigger: ACCCATGATGTATGGGTCTCACCTGACTTGAGGTGA...AGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp TGTGGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGTTCCCGGCCGAGCCCTaGCATGCACACAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: CGFNGGLSVTEYSARDTGFPAEP*HAHRWT
Trigger: AGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAA...CCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp ATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAGGGGCTGAAGCCAGCAGTGGTATGGAGGCTTGTCTGTaGCAGAATACTCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: IWGSAKPWAAQGAEASSGMEACL*QNTQQG
Trigger: CCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCAT...ACCACTGCTGGCTTCAGCCCCTTGAGCAGCCCATGGCTTAGCAGACCCCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACACATGGCGTCCGAGATaGCAGCAGCCGCGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDTWRPR*QQPRGR
Trigger: TCTTCCACGCGGCTGCTGTCATCTCGGACGCCATGT...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp ACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGTAGGCGCCGCCAGCGATaGACTGTTTCGAAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TCHSTWRCRHSQQRSTACRRRQR*TVSKGP
Trigger: CGGGCCCTTCGAAACAGTGCATCGCTGGCGGCGCCT...ACAAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTGGAGGCCAATTGTCCACATGTCCATTCAACCTGGCGTTaGCGTCATAGCCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: HLLPAGELSVLEANCPHVHSTWR*RHSQQR
Trigger: TCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATG...GACATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTCGAGGGGGCGGCTGCTaGTTCCGCCGCACAATCTCC +
Preference number: 4 (lower is better)
Translates to: SASSSAPCGTCVFSELMSRGGGC*FRRTIS
Trigger: GGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCG...ACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGATGGCCTCTGGTGCCTaGAGACATCACCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPIFGHEGPEHGFKVAGAMASGA*RHHQEP
Trigger: TGGCTCTTGGTGATGTCTGCAGGCACCAGAGGCCAT...CGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR GCA 90 bp CACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGATGGCCTCTGGTGCCTaGAGACATCACCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: HVLHRHVHLQVLLAVRLQMASGA*RHHQEP
Trigger: TGGCTCTTGGTGATGTCTGCAGGCACCAGAGGCCAT...CTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR GCA 90 bp CCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATCTGCATGGCCTCTGGTaGCTGCAGACATCACCAAGA +
Preference number: 4 (lower is better)
Translates to: PSSNRVMSQNSAPAPSRYLHGLW*LQTSPR
Trigger: TCTTGGTGATGTCTGCAGGCACCAGAGGCCATGCAG...ATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS-3UTR GCA 90 bp GAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGATAGCCTTGTGGGCTGGATGGAGATGTTCACCTaGCCATCTTCGGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: EHGFKVAGAGGQDSLVGWMEMFT*PSSGMK
Trigger: CTTCATGCCCGAAGATGGGCAGGTGAACATCTCCAT...CCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAACTCGAAGGCCTGCCTaGTGGGCACCATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: DVHLPIFGHEGPEHGFKVTRRPA*WAPSPR
Trigger: TCGGGGAGATGGTGCCCAGCAGGCAGGCCTTCGAGT...TACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TGTGGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGTACTGGCGGCACAGCTaGTCCAGGCGGCACAACTGG +
Preference number: 4 (lower is better)
Translates to: CGFNGGLSVTEYSARDTGYWRHS*SRRHNW
Trigger: CCAGTTGTGCCGCCTGGAGCAGCTGTGCCGCCAGTA...CCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp ATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCATCTGCAGCACGTTCTaGACCGTCACGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: IFGHEGPEHGFKVAGAGGICSTF*TVTFIS
Trigger: GGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT...GCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGCTGCGTTTTGTCAGCTaGCTCCAGGATCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HFPKELWLHGSHNKKGVLLRFVS*LQDLQH
Trigger: GTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAG...CAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACACCGCTTCATGTCCAGTaGCTGCGTTTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTPLHVQ*LRFVSC
Trigger: GCAGCTGACAAAACGCAGGCACTGGACATGAAGCGG...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GCACCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCACCTTGGTGAACTGGTaGACAATGATGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: APTAIGMRIAGSLLSRQGTLVNW*TMMCRQ
Trigger: CTGCCTGCACATCATTGTGCACCAGTTCACCAAGGT...GCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GAATACAAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCAGCAAGATGGCCTTGGCCTGGCAGGTaGACCCACTGCCATAGGCAT +
Preference number: 4 (lower is better)
Translates to: EYKHLVPAHSHGEVAARWPWPGR*THCHRH
Trigger: ATGCCTATGGCAGTGGGTGCACCTGCCAGGCCAAGG...CCATCTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp CCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAAGGTGACAGGCCCCAGTaGCTGAGTCCACAACACGCC +
Preference number: 4 (lower is better)
Translates to: PEQVFSWDACPRLVLEFKGDRPQ*LSPQHA
Trigger: GGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACC...TTTGAATTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAAGGCAGATTCGCTGGTaGAGCGCAAGTCTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTRQIRW*SASLLS
Trigger: GCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCT...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTACATGTCATTCAACCTaGCGTTGCCGTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSLYTVAPWADLATGNRPTCHST*RCRHSQ
Trigger: CTGGCTATGACGGCAACGCCAGGTTGAATGACATGT...AGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CCAGCAAAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGTGAGCTCTCGGTCCTaGAGGCCAATTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: PAKIHSLSLYTVAPWADLVSSRS*RPIVHM
Trigger: CATGTGGACAATTGGCCTCCAGGACCGAGAGCTCAC...TAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TCTCCCCACTTCTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACAGGTTGTTGGTTATTTTaGCTCCGCTTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SPHFWVVSPSLSRGLASTGCWLF*LRFAQR
Trigger: TCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACC...TGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAGAAGTGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTAGAGCGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGAATCTCCACTATCAGTaGAGAGGAGAGGCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: VERVLGRHVDLAVVDVAQNLHYQ*RGEALE
Trigger: TTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGATT...CTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACTTTGCTGGCTTCCCACTGCATGGCCTCTaGTGCCTGCAGACATCACCA +
Preference number: 4 (lower is better)
Translates to: GLSVTEYSARDTGDFAGFPLHGL*CLQTSP
Trigger: TGGTGATGTCTGCAGGCACCAGAGGCCATGCAGTGG...GAAGCCAGCAAAGTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR CCA 90 bp AGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGCACCATCTCCCCGATaGAGATGTTCACCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SDVTEFRARSLQVCLHVLAPSPR*RCSPAH
Trigger: ATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGC...CAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGAGATGTAGCGCAGCATaGACTCGAAGGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: DLGELVHNDVQAVPLHVQRCSAA*TRRPAC
Trigger: GCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCT...CTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCTCCAGGCGGCACAACTaGAAGCTCAGTGCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVSRRHN*KLSASL
Trigger: CAAACTGGCACTGAGCTTCCAGTTGTGCCGCCTGGA...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGGAGAGACCTTGGTGAACTaGTGCACAATGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGSAASCPVPAFCQLPPGETLVN*CTMMCR
Trigger: CCTGCACATCATTGTGCACCAGTTCACCAAGGTCTC...TCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATGAGACCTTGGTGAACTaGTGCACAATGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LCWLLPGRALTCTQVDWDETLVN*CTMMCR
Trigger: CCTGCACATCATTGTGCACCAGTTCACCAAGGTCTC...ATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GGAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGGCGATTCTTCACAATaGGCAGGCGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GDVHLPIFGHEGPEHGFKGDSSQ*AGATGP
Trigger: AGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCC...TTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAGCAAGGTGTGTGTGGTaGGTAGCACTGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTARCVW*VALLWL
Trigger: AAGCCACAGCAGTGCTACCCACCACACACACCTTGC...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTGCAAGGTGTGTGTGGTaGGTAGCACTGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: HVDLAVVDVAQHGLEGLPARCVW*VALLWL
Trigger: AAGCCACAGCAGTGCTACCCACCACACACACCTTGC...AGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCTGGCTCCCACCACTGACCTACATCTaGGGGTCTGCTAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QQERGPGILFPVRERWLPPLTYI*GSAKPW
Trigger: CCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGG...TGGGAGCCAGCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCCAGGAGTTGACAGCATaGATAGAGACAGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: VGWPWVPVKQQSDVTEFRQELTA*IETGKA
Trigger: GGCCTTACCTGTCTCTATCCATGCTGTCAACTCCTG...GCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp ATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTGGAAACTGGGTAGATaGGTGTGTGGCCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: MMCRQCRFMSSACVLSAAWKLGR*VCGPTL
Trigger: CAGAGTGGGGCCACACACCCATCTACCCAGTTTCCA...GGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR CCA 90 bp TGCCATTATTTGAGATCTATGCAGGCCACGTCTGTTACTGGTGGCACTGACCAACCTCGCTGTCGGAGCTaGGCTGGACGACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CHYLRSMQATSVTGGTDQPRCRS*AGRPPR
Trigger: CCTGGGAGGTCGTCCAGCCCAGCTCCGACAGCGAGG...TTGGTCAGTGCCACCAGTAACAGACGTGGCCTGCATAGATCTCAAATAATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp CTGACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATAATGACAGCAGCCGCGTaGAAGAGCCTCCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: LTSGPFTPKFTSSQVRPIMTAAA*KSLPLG
Trigger: GCCCAGTGGGAGGCTCTTCCACGCGGCTGCTGTCAT...TATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGTGACAATGGCTACGTaGCCCTGCACGCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASWQPQQERGPGILFPVRVTMAT*PCTHSS
Trigger: GGAGGAGTGCGTGCAGGGCCACGTAGCCATTGTCAC...CCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CGCAAACAAGTAGAGCGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATCGTCAAGCAACAGAGTaGTGTCACAGAATTCCGCGC +
Preference number: 4 (lower is better)
Translates to: RKQVERVLGRHVDLAVVDRQATE*CHRIPR
Trigger: GCGCGGAATTCTGTGACATCACTCTGTTGCTTGACG...ATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTACTTGTTTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGCCCATCTTCGGGCATaGAGGACCGGAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVAAHLRA*RTGTWL
Trigger: AAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGC...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp GGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGGCCCCGACCTGTGTCTTCAGTaGATTAATGAGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GCGRSHILWKLGRWVCGPDLCLQ*INEFGA
Trigger: GGCCCCAAACTCATTAATTCACTGAAGACACAGGTC...GGGGCCACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR TCA 90 bp GTGGGCAACTTGGAGACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCATCTCGGGACTTCTTaGAGCCAACCCGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VGNLETLVNWCTMMCRQCHLGTS*SQPAPH
Trigger: ATGAGGAGCGGGTTGGCTTCAAGAAGTCCCGAGATG...GCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp CTCTCAGGACCTGCAGGCCCCTCTGGTCTTCTGCCATTATTTGAGATCTATGCAACATGGCGTCCGAGATaGCAGCAGCCGCGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSGPAGPSGLLPLFEIYATWRPR*QQPRGR
Trigger: TCTTCCACGCGGCTGCTGTCATCTCGGACGCCATGT...TGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGGTCCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR TCA 90 bp CCCAGGTCTGGAAGTCCACGTCATAGCAGTGCAGCTCGTTGGGCAGCGTGTTGTTGTTACTGGTGGCACTaGCCAAGCTATTCACGAGGA +
Preference number: 4 (lower is better)
Translates to: PRSGSPRHSSAARWAACCCYWWH*PSYSRG
Trigger: TCCTCGTGAATAGCTTGGTCAGTGCCACCAGTAACA...ACAACACGCTGCCCAACGAGCTGCACTGCTATGACGTGGACTTCCAGACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR TCA 90 bp TTTGCCCAGAGAATACAAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCACCGCAGGAGGTCATTaGGCATGGTCTTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FAQRIQTSCPGTQPRGSCTAGGH*AWSSWS
Trigger: GGACCAGGAAGACCATGCTCAATGACCTCCTGCGGT...GCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp CTCGTTGGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCATTTTGGCTCCGCTTTaGCCAGAGAATACAAACATC +
Preference number: 4 (lower is better)
Translates to: LVGQRVVGRTPKHIEVAVILAPL*PENTNI
Trigger: GATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAAT...GACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCCAACGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCATGGAGATGTTCACCTaGCCATCTTCGGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: DDRRGSASSSAPCGTCVFMEMFT*PSSGMK
Trigger: CTTCATGCCCGAAGATGGGCAGGTGAACATCTCCAT...GAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAATGGACTCGAAGGCCTaGCTGCTGGGCACCATCTCC +
Preference number: 4 (lower is better)
Translates to: DVHLPIFGHEGPEHGFKVMDSKA*LLGTIS
Trigger: GGAGATGGTGCCCAGCAGGCAGGCCTTCGAGTCCAT...TACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CAGCACATCCTCCACATGGCCTTTCCGTGGGTATTTGATCTTGTCGGTGTAGAGACAACCAGCACGTTCTaGAGGTCCACGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QHILHMAFPWVFDLVGVETTSTF*RSTEAS
Trigger: CGAGGCCTCCGTGGACCTGCAGAACGTGCTGGTTGT...CTCTACACCGACAAGATCAAATACCCACGGAAAGGCCATGTGGAGGATGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp TCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATCTCCAGGTTCTaGTTGCAGTACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSNRVMSQNSAPAPSRYAFISRF*LQYACS
Trigger: GCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAA...GGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp GATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATATCTGCAGCACGTTCTaGACCGTCACGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: DVTEFRARSLQVCLHVLDICSTF*TVTFIS
Trigger: GGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT...ATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR GCA 90 bp AGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTATGATGTCCTTCATGTCCAGTGCCTaGGTTTTGTCAGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSAHCLSEMWEARESMMSFMSSA*VLSAAS
Trigger: GGAGGCAGCTGACAAAACGCAGGCACTGGACATGAA...GGACATCATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGATGATGTGCAGGCAGTaGCGCTTCATGTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: WCTMMCRQCRFMSSACVLMMCRQ*RFMSSA
Trigger: GGCACTGGACATGAAGCGGCACTGCCTGCACATCAT...CAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp ATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACCCCAGCTCTGCGCACTaGTTGTCTGAGATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ICSTFCTVTFISRFCLQYPSSAH*LSEMWE
Trigger: CTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGG...GTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCGTTCCCAGCTCATCTTaGACTAGGCCACTTCCTAGC +
Preference number: 4 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVVPSSS*TRPLPS
Trigger: GCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGGAAC...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp AGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAACAAAGACAAACATGCTaGTCCCATAGACGACGGCCG +
Preference number: 4 (lower is better)
Translates to: RRGSASSSAPCGTCVFSEQRQTC*SHRRRP
Trigger: CGGCCGTCGTCTATGGGAGCAGCATGTTTGTCTTTG...TTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR GCA 90 bp AGTGAATGCACCTGGCCCACATGGCTGGGCGCTGCAGCCTGCACTCCACTTCCACAACTGGAAGCTCAGTaGCAGTTTGTACACATCCAT +
Preference number: 4 (lower is better)
Translates to: SECTWPTWLGAAACTPLPQLEAQ*QFVHIH
Trigger: ATGGATGTGTACAAACTGGCACTGAGCTTCCAGTTG...TGGAAGTGGAGTGCAGGCTGCAGCGCCCAGCCATGTGGGCCAGGTGCATTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR CCA 90 bp TTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTTTCCACTCCGTCCACTaGCCAGTTGCAAACTTGTAT +
Preference number: 4 (lower is better)
Translates to: LSLYTVAPWADLATGNRPFHSVH*PVANLY
Trigger: ATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAA...AGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAGAAGTTGCAGCAAGATaGGGGGATCTCGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: PRSRCSVGMRVHVLSLNSEVAAR*GDLATL
Trigger: CAGAGTGGCGAGATCCCCCCATCTTGCTGCAACTTC...TGAATTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGATCACCTGGTTGAAGTaGGACTCCTTTACCACGAAG +
Preference number: 4 (lower is better)
Translates to: FGHEGPEHGFKVAGAGGQITWLK*DSFTTK
Trigger: CTTCGTGGTAAAGGAGTCCCACTTCAACCAGGTGAT...CTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGAATCTCCACTATCAGTaGAGAGGAGAGGCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: RHVDLAVVDVAQHGLEGLNLHYQ*RGEALE
Trigger: TTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGATT...CAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTAGATGTAGCGCAGCATaGACTCGAAGGCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVARCSAA*TRRPAC
Trigger: GCAGGCAGGCCTTCGAGTCCATGCTGCGCTACATCT...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GTTGTTGTAGAAGCCGTAGTAGTAGGGGGCCGCAAACAAGTAGAGCGAGTCCTCGTCTCTCCCCACTTCTaGGTGGTGAGCCCATCACTG +
Preference number: 4 (lower is better)
Translates to: VVVEAVVVGGRKQVERVLVSPHF*VVSPSL
Trigger: CAGTGATGGGCTCACCACCCAGAAGTGGGGAGAGAC...GAGGACTCGCTCTACTTGTTTGCGGCCCCCTACTACTACGGCTTCTACAACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp GCTGACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATCCCAGGCAGATTCGCTaGTGCAGCGCAAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: ADLRALHSKIHLKSGETHPRQIR*CSASLL
Trigger: TAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGG...ATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTTGTTGTAGAAGCCGTAGTAGTAGGGGGCCGCAAACAAGTAGAGCGAGTCCTCCTCCCAGCACTAGAGTaGATCCACATGGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VVVEAVVVGGRKQVERVLLPALE*IHMGPS
Trigger: TGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAG...GAGGACTCGCTCTACTTGTTTGCGGCCCCCTACTACTACGGCTTCTACAACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGGGAGCTGTGGCTTCATaGCAGCCACAACAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PVGVAGATSCGNWVDGCVGAVAS*QPQQER
Trigger: CCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCC...CACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CCA 90 bp ATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCAGGAGCCACATCTTGTaGAAACTGGGTAGATGGGTG +
Preference number: 4 (lower is better)
Translates to: IFGHEGPEHGFKVAGAGGRSHIL*KLGRWV
Trigger: CACCCATCTACCCAGTTTCCACAAGATGTGGCTCCT...GCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR CCA 90 bp TCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTTCCACGTCGCAGAACTaGCGGCTCTCCCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: SASSSAPCGTCVFSELMSSTSQN*RLSHSR
Trigger: GCGGCTGTGGGAGAGCCGCCAGTTCTGCGACGTGGA...ACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
3UTR CAA 72 bp CAGGACCTGCAGGCCCCTCTGGTCTTCTGCCATTATTaGAGATCTATGCAGGCCACGTCTGTTACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QDLQAPLVFCHY*RSMQATSVTGG
Trigger: GCCACCAGTAACAGACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR TCA 90 bp ATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCTTTCCGTGGGTATTTaGTCTTGTCGGTGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: IFGHEGPEHGFKVAGAGGLSVGI*SCRCRG
Trigger: TCCTCTACACCGACAAGATCAAATACCCACGGAAAG...GCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415354.6
ENST00000642151.1
CDS-3UTR TCA 90 bp CACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGTCACCTCAAGTCAGGTaGGACCCATACATCATGGGT +
Preference number: 4 (lower is better)
Translates to: HFPKELWLHGSHNKKGVLSPQVR*DPYIMG
Trigger: ACCCATGATGTATGGGTCTCACCTGACTTGAGGTGA...CAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp CAGGTAAGGCCACTGACCTACATCTGGGGGTCTGCTAAGCCATGGGCTGCTCAAATGGAGGCTTGTCTGTaGCAGAATACTCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: QVRPLTYIWGSAKPWAAQMEACL*QNTQQG
Trigger: CCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCAT...TTGAGCAGCCCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGGCCTTACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp TGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTGGTGGGCTGCTTGGCTaGGGTGGTGCCAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: WDACPRLVLEFKLEEVVGGGLLG*GGAKVQ
Trigger: CTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACC...ACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp TCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTTGGGCTGGCCGTGGGTaGCCGTCAAGCAACAGAGTG +
Preference number: 4 (lower is better)
Translates to: SASSSAPCGTCVFSELMSWAGRG*PSSNRV
Trigger: CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCA...ACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGATGGAGATGTTCACCTaGCCATCTTCGGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: LPIFGHEGPEHGFKVAGAMEMFT*PSSGMK
Trigger: CTTCATGCCCGAAGATGGGCAGGTGAACATCTCCAT...CGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACCTGCGTTTTGTCAGCTaGCTCCAGGATCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDLRFVS*LQDLQH
Trigger: GTGCTGCAGATCCTGGAGGCAGCTGACAAAACGCAG...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTCCGCTTCATGTCCAGTaGCTGCGTTTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVAPLHVQ*LRFVSC
Trigger: GCAGCTGACAAAACGCAGGCACTGGACATGAAGCGG...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCACCTTGGTGAACTGGTaGACAATGATGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AYTQRRAGHFPKELWLHGTLVNW*TMMCRQ
Trigger: CTGCCTGCACATCATTGTGCACCAGTTCACCAAGGT...GCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAACCTTGGTGAACTGGTaGACAATGATGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTTLVNW*TMMCRQ
Trigger: CTGCCTGCACATCATTGTGCACCAGTTCACCAAGGT...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CCTGGAGGCCAATTGTCCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGACAAACATGCTaGTCCCATAGACGACGGCCG +
Preference number: 4 (lower is better)
Translates to: PGGQLSTCHSTWRCRHSQQRQTC*SHRRRP
Trigger: CGGCCGTCGTCTATGGGAGCAGCATGTTTGTCTTTG...CTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACAATTGGCCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443265.5
CDS-3UTR CCA 90 bp CCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATTCCACTCCGTCCACTaGCCAGTTGCAAACTTGTAT +
Preference number: 4 (lower is better)
Translates to: PVKQQSDVTEFRARSLQVFHSVH*PVANLY
Trigger: ATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAA...TACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAACATGTCATTCAACCTaGCGTTGCCGTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTTCHST*RCRHSQ
Trigger: CTGGCTATGACGGCAACGCCAGGTTGAATGACATGT...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTTGTTGTAGAAGCCGTAGTAGTAGGGGGCCGCAAACAAGTAGAGCGAGTCCTCGAAGTTGCAGCAAGATaGGGGGATCTCGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: VVVEAVVVGGRKQVERVLEVAAR*GDLATL
Trigger: CAGAGTGGCGAGATCCCCCCATCTTGCTGCAACTTC...GAGGACTCGCTCTACTTGTTTGCGGCCCCCTACTACTACGGCTTCTACAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCTTCATCATGATCACCTaGTTGAAGTGGGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: GWPWVPVKQQSDVTEFRAFIMIT*LKWDSF
Trigger: AAAGGAGTCCCACTTCAACCAGGTGATCATGATGAA...GGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATAATCTCCACTATCAGTaGAGAGGAGAGGCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: PSSNRVMSQNSAPAPSRYNLHYQ*RGEALE
Trigger: TTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGATT...ATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGCACCATCTCCCCGATaGAGATGTTCACCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVAAPSPR*RCSPAH
Trigger: ATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGC...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp AGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTATGATGTCCGAGACCTTGGTGAACTaGTGCACAATGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSAHCLSEMWEARESMMSETLVN*CTMMCR
Trigger: CCTGCACATCATTGTGCACCAGTTCACCAAGGTCTC...GGACATCATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TGTCCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCCCAGGCAGATTCGCTaGTGCAGCGCAAGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: CPHVIQPGVAVIASKDPQPRQIR*CSASLL
Trigger: TAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGG...CTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp ATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGAGGAGCCCCTTACATaGATCTCAGTGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ICSTFCTVTFISRFCLQYEEPLT*ISVRVG
Trigger: ACCCACCCTCACTGAGATCCATGTAAGGGGCTCCTC...GTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTCCACTGACCTACATCTaGGGGTCTGCTAAGCCATGG +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVAPLTYI*GSAKPW
Trigger: CCATGGCTTAGCAGACCCCCAGATGTAGGTCAGTGG...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CTTGGAGACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATTTCCCCAAGGAGCTGTaGCTTCATGGCAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: LGDLGELVHNDVQAVPLHFPKEL*LHGSHN
Trigger: GTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAA...ATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGACATCTTGTGGAAACTaGGTAGATGGGTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LPIFGHEGPEHGFKVAGATSCGN*VDGCVA
Trigger: GGCCACACACCCATCTACCCAGTTTCCACAAGATGT...CGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR CCA 90 bp GGTCTTCTGCCATTATTTGAGATCTATGCAGGCCACGTCTGTTACTGGTGGCACGGTCAAAGGCCACCATaGTATGCCCGTAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GLLPLFEIYAGHVCYWWHGQRPP*YARSAA
Trigger: AGCGGCGCTACGGGCATACCATGGTGGCCTTTGACC...GTGCCACCAGTAACAGACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
3UTR CAA 72 bp TGCTCCAGGCGGCACAACTGGAAGCTCAGTGCCAGTTaGTACACATCCATGATGAGCAGCACATCCTCCACA +
Preference number: 4 (lower is better)
Translates to: CSRRHNWKLSAS*YTSMMSSTSST
Trigger: TGTGGAGGATGTGCTGCTCATCATGGATGTGTACAAACTGGCACTGAGCTTCCAGTTGTGCCGCCTGGAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp GTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTTCAATTTTCCACTCCTCCACGTCTTGTCCTTaGATTCAAACTGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VAPWADLATGNRPSIFHSSTSCP*IQTGRG
Trigger: ACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGA...GGAGTGGAAAATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR TCA 90 bp AGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCCTTTCCGTGGGTATTTaGTCTTGTCGGTGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SNRVMSQNSAPAPSRYAFLSVGI*SCRCRG
Trigger: TCCTCTACACCGACAAGATCAAATACCCACGGAAAG...GAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415354.6
ENST00000642151.1
CDS-3UTR TCA 90 bp GGAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAACGTCAAGCAACAGAGTaGTGTCACAGAATTCCGCGC +
Preference number: 4 (lower is better)
Translates to: GDVHLPIFGHEGPEHGFKRQATE*CHRIPR
Trigger: GCGCGGAATTCTGTGACATCACTCTGTTGCTTGACG...TTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR TCA 90 bp GCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTAGGCTCTGGGCACCCTaGCCCTTGGCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ACPRLVLEFKLEEVVGYFRLWAP*PLAWQV
Trigger: CACCTGCCAGGCCAAGGGTCAGGGTGCCCAGAGCCT...AAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp CTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATATTTTGGCTCCGCTTTaGCCAGAGAATACAAACATC +
Preference number: 4 (lower is better)
Translates to: LCWLLPGRALTCTQVDWDILAPL*PENTNI
Trigger: GATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAAT...ATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTTCATGTCCAGTGCCTaGGTTTTGTCAGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: EMFTCPSSGMKDRNMASKFMSSA*VLSAAS
Trigger: GGAGGCAGCTGACAAAACGCAGGCACTGGACATGAA...CTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp ATCTCCACTATCAGTGGAGAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCCCGCTTCATGTCCAGTaGCTGCGTTTTGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ISTISGEERRSNSFIMITPLHVQ*LRFVSC
Trigger: GCAGCTGACAAAACGCAGGCACTGGACATGAAGCGG...GGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTTGGTGCACAATGATGTaGAGGCAGTGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVAWCTMM*RQCRFM
Trigger: CATGAAGCGGCACTGCCTGCACATCATTGTGCACCA...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR GCA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACTGGTGCACAATGATGTaGAGGCAGTGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDWCTMM*RQCRFM
Trigger: CATGAAGCGGCACTGCCTGCACATCATTGTGCACCA...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp GCTGACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATCCCCAAAGACAAACATaGTGCTCCCATAGACGACGG +
Preference number: 4 (lower is better)
Translates to: ADLRALHSKIHLKSGETHPQRQT*CSHRRR
Trigger: CCGTCGTCTATGGGAGCAGCATGTTTGTCTTTGGGG...ATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR GCA 90 bp CTTGGAGACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATTGTTGTTGTCCACCGTaGCCCCGAAGATGTACATGG +
Preference number: 4 (lower is better)
Translates to: LGDLGELVHNDVQAVPLHCCCPP*PRRCTW
Trigger: CCATGTACATCTTCGGGGGCACGGTGGACAACAACA...ATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp GAGAATACAAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCAGCAAGATTGTACATCTCCCCGCTaGGGATGTTGTTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: ENTNILSRHTATGKLQQDCTSPR*GCCCPP
Trigger: CGGTGGACAACAACATCCGCAGCGGGGAGATGTACA...ATCTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTCCGCCCCGGGCCGGCTaGAGAAACCACATTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VLSLNSNWKRLLVILAPLPPRAG*RNHISR
Trigger: CCGGGAAATGTGGTTTCTCCAGCCGGCCCGGGGCGG...AAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414985.5
CDS-3UTR CCA 90 bp TGTGGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGTGAGCTCTCGGTCCTaGAGGCCAATTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: CGFNGGLSVTEYSARDTGVSSRS*RPIVHM
Trigger: CATGTGGACAATTGGCCTCCAGGACCGAGAGCTCAC...CCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGGGGATCTCGCCACTCTaGGCCACCTCCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HVLSLNSNWKRLLVILAPGISPL*ATSSQQ
Trigger: CTGCTGGGAGGAGGTGGCCCAGAGTGGCGAGATCCC...CGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CCA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCGGTTGTTGGTTATTTTaGCTCCGCTTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVGCWLF*LRFAQR
Trigger: TCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACC...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp AGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGATCACCTGGTTGAAGTaGGACTCCTTTACCACGAAG +
Preference number: 4 (lower is better)
Translates to: SDVTEFRARSLQVCLHVLITWLK*DSFTTK
Trigger: CTTCGTGGTAAAGGAGTCCCACTTCAACCAGGTGAT...CAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TCCAGGATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGGAGACCTTGGTGAACTaGTGCACAATGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRICSTFCTVTFISRFCLETLVN*CTMMCR
Trigger: CCTGCACATCATTGTGCACCAGTTCACCAAGGTCTC...CAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGATCCTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTGGCGATTCTTCACAATaGGCAGGCGCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SASSSAPCGTCVFSELMSGDSSQ*AGATGP
Trigger: AGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCC...ACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTCCAGCACGACCGACCTaGGAGCTGACCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VLSLNSNWKRLLVILAPLPARPT*ELTSGP
Trigger: GGGCCCTGAGGTCAGCTCCCAGGTCGGTCGTGCTGG...AAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGCAGGAGTTGACAGCATaGATAGAGACAGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: DLGELVHNDVQAVPLHVQQELTA*IETGKA
Trigger: GGCCTTACCTGTCTCTATCCATGCTGTCAACTCCTG...CTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CCA 90 bp CATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGTCTTCCCCAAGGAGCTGTaGCTTCATGGCAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: HVIQPGVAVIASKDPQLVFPKEL*LHGSHN
Trigger: GTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAA...GACAAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp CCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGCCTGCAGCCGGTTGTTGTCACATGGCCTTTCCGTaGGTATTTGATCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: PSRSSPGSACSTPAAGCCHMAFP*VFDLVG
Trigger: ACCGACAAGATCAAATACCCACGGAAAGGCCATGTG...ACAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
3UTR CAA 72 bp CAGGAGCAGTCTTTCACATCGAACCGCAGGAGGTCATaGAGCATGGTCTTCCTGGTCCAAACACTGATGCTG +
Preference number: 4 (lower is better)
Translates to: QEQSFTSNRRRS*SMVFLVQTLML
Trigger: CAGCATCAGTGTTTGGACCAGGAAGACCATGCTCAATGACCTCCTGCGGTTCGATGTGAAAGACTGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp CCTGTGGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGTCCACGTCTTGTCCTTaGATTCAAACTGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PVGVAGATSCGNWVDGCVSTSCP*IQTGRG
Trigger: ACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGA...CACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR TCA 90 bp ACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATACATCATCTCGGGACTTCTTaGAGCCAACCCGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TSGPFTPKFTSSQVRPIHHLGTS*SQPAPH
Trigger: ATGAGGAGCGGGTTGGCTTCAAGAAGTCCCGAGATG...ATGTATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp CCCAGCTCATCTTGCACTAGGCCACTTCCTAGCCTGCAGGCTGCCTATGGATCTCGTCCACTGGCCAGTTaGAAACTTGTATTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSSSCTRPLPSLQAAYGSRPLAS*KLVFKE
Trigger: CTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACG...AGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCCTAGTGCAAGATGAGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp AGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCAGAGATGAGCACGTTCTTTCCGTaGGTATTTGATCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: RIPRPLPPGMPSCPGSEMSTFFP*VFDLVG
Trigger: ACCGACAAGATCAAATACCCACGGAAAGAACGTGCT...CATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415354.6
CDS-3UTR CCA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACAATCTCCACTATCAGTaGAGAGGAGAGGCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDNLHYQ*RGEALE
Trigger: TTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGATT...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CAGGAGTTGACAGCATGGATAGAGACAGGTAAGGCCACTGACCTACATCTGGGGCAGGAGTTGACAGCATaGATAGAGACAGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: QELTAWIETGKATDLHLGQELTA*IETGKA
Trigger: GGCCTTACCTGTCTCTATCCATGCTGTCAACTCCTG...CCCCAGATGTAGGTCAGTGGCCTTACCTGTCTCTATCCATGCTGTCAACTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp ATGCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTGGAAGAGCCTCCCACTaGGCAGCTCCGAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: MRVHVLSLNSNWKRLLVIGRASH*AAPRQA
Trigger: AGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCC...AATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp CCTGGAGGCCAATTGTCCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCGTCCACTGGCCAGTTaGAAACTTGTATTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGGQLSTCHSTWRCRHSQRPLAS*KLVFKE
Trigger: CTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACG...CTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACAATTGGCCTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR GCA 90 bp ATGCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTAGCCTCTCCCGCGCCTaGGTGATCTTCCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: MRVHVLSLNSNWKRLLVISLSRA*VIFLRS
Trigger: GCTTCGCAGGAAGATCACGCAGGCGCGGGAGAGGCT...AATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp TTACCATGGCCACCAGGTGCAAGAGGCGTTCTTCATATTCAGAAGGATTCGAGGCGGGCTGTAACCTCCTaGTGTTTGCAGAGCTCACAA +
Preference number: 4 (lower is better)
Translates to: LPWPPGARGVLHIQKDSRRAVTS*CLQSSQ
Trigger: TTGTGAGCTCTGCAAACAGCAGGAGGTTACAGCCCG...CCTCGAATCCTTCTGAATATGAAGAACGCCTCTTGCACCTGGTGGCCATGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp TGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTCACCAAATACATAAATaGCATCTTTATAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: WGAPEQVFSWDACPRLVLHQIHK*HLYRPP
Trigger: TGGTGGCCTATAAAGATGCCATTTATGTATTTGGTG...AAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CAGGAGTTGACAGCATGGATAGAGACAGGTAAGGCCACTGACCTACATCTGGGGTTCCACTCCGTCCACTaGCCAGTTGCAAACTTGTAT +
Preference number: 4 (lower is better)
Translates to: QELTAWIETGKATDLHLGFHSVH*PVANLY
Trigger: ATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAA...CCCCAGATGTAGGTCAGTGGCCTTACCTGTCTCTATCCATGCTGTCAACTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGCCAGTTTGTACACATCCATGATGAGCAGCACATCCTCCACATGGCCTTTCCGACATGTCATTCAACCTaGCGTTGCCGTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: CQFVHIHDEQHILHMAFPTCHST*RCRHSQ
Trigger: CTGGCTATGACGGCAACGCCAGGTTGAATGACATGT...CGGAAAGGCCATGTGGAGGATGTGCTGCTCATCATGGATGTGTACAAACTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp AAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTACTGGAAGAGGTTGTTaGTTATTTTGGCTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: KIHSLSLYTVAPWADLATTGRGC*LFWLRF
Trigger: AAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGT...AGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CCA 90 bp ATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCACTGGAAGAGGTTGTTaGTTATTTTGGCTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: MSQNSAPAPSRYAFMSWITGRGC*LFWLRF
Trigger: AAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGT...GATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp TGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCACTGGAAGAGGTTGTTaGTTATTTTGGCTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: WQPQQERGPGILFPVRERTGRGC*LFWLRF
Trigger: AAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGT...GCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTATCACCTGGTTGAAGTaGGACTCCTTTACCACGAAG +
Preference number: 4 (lower is better)
Translates to: VHLPIFGHEGPEHGFKVAITWLK*DSFTTK
Trigger: CTTCGTGGTAAAGGAGTCCCACTTCAACCAGGTGAT...AGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATTTCATCATGATCACCTaGTTGAAGTGGGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: PSSNRVMSQNSAPAPSRYFIMIT*LKWDSF
Trigger: AAAGGAGTCCCACTTCAACCAGGTGATCATGATGAA...ATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGATCAGATTCATCATGATCACCTaGTTGAAGTGGGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: SQNSAPAPSRYAFMSWIRFIMIT*LKWDSF
Trigger: AAAGGAGTCCCACTTCAACCAGGTGATCATGATGAA...TCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGAGCGCTGGCTCCCATTCATCATGATCACCTaGTTGAAGTGGGACTCCTTT +
Preference number: 4 (lower is better)
Translates to: QQERGPGILFPVRERWLPFIMIT*LKWDSF
Trigger: AAAGGAGTCCCACTTCAACCAGGTGATCATGATGAA...TGGGAGCCAGCGCTCCCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TGTGGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGAATCTCCACTATCAGTaGAGAGGAGAGGCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: CGFNGGLSVTEYSARDTGNLHYQ*RGEALE
Trigger: TTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGATT...CCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTGCACCATCTCCCCGATaGAGATGTTCACCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SASSSAPCGTCVFSELMSAPSPR*RCSPAH
Trigger: ATGGGCAGGTGAACATCTCCATCGGGGAGATGGTGC...ACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp GCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGCACATGGCCTTTCCGTaGGTATTTGATCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: ASWQPQQERGPGILFPVRHMAFP*VFDLVG
Trigger: ACCGACAAGATCAAATACCCACGGAAAGGCCATGTG...CCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR TCA 90 bp TCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTCGTCAAGCAACAGAGTaGTGTCACAGAATTCCGCGC +
Preference number: 4 (lower is better)
Translates to: SASSSAPCGTCVFSELMSRQATE*CHRIPR
Trigger: GCGCGGAATTCTGTGACATCACTCTGTTGCTTGACG...ACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR GCA 90 bp TGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTGGTGTTCAGTTGGGATaGGTGTCCACGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: WDACPRLVLEFKLEEVVGGVQLG*VSTSCP
Trigger: AGGACAAGACGTGGACACGCATCCCAACTGAACACC...ACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGCATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGGGCCACTTCCTAGCCTaGAGGCTGCCTATGGATCTC +
Preference number: 4 (lower is better)
Translates to: HVLSLNSNWKRLLVILAPGHFLA*RLPMDL
Trigger: GAGATCCATAGGCAGCCTGCAGGCTAGGAAGTGGCC...CGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp ACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGTACATGTCATTCAACCTaGCGTTGCCGTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: TCHSTWRCRHSQQRSTACTCHST*RCRHSQ
Trigger: CTGGCTATGACGGCAACGCCAGGTTGAATGACATGT...ACAAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR TCA 90 bp CATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGTCTCCACGTCTTGTCCTTaGATTCAAACTGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: HVIQPGVAVIASKDPQLVSTSCP*IQTGRG
Trigger: ACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGA...GACAAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TGTCCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCGTCCACTGGCCAGTTaGAAACTTGTATTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: CPHVIQPGVAVIASKDPQRPLAS*KLVFKE
Trigger: CTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACG...CTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TTTGCCCAGAGAATACAAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCATTTTGGCTCCGCTTTaGCCAGAGAATACAAACATC +
Preference number: 4 (lower is better)
Translates to: FAQRIQTSCPGTQPRGSCILAPL*PENTNI
Trigger: GATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAAT...GCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CCA 90 bp ACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGTTTCCACTCCGTCCACTaGCCAGTTGCAAACTTGTAT +
Preference number: 4 (lower is better)
Translates to: TCHSTWRCRHSQQRSTACFHSVH*PVANLY
Trigger: ATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAA...ACAAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGGTGAGCTCTCGGTCCTaGAGGCCAATTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: HVLSLNSNWKRLLVILAPVSSRS*RPIVHM
Trigger: CATGTGGACAATTGGCCTCCAGGACCGAGAGCTCAC...CGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CCA 90 bp CTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTTGCCCAGAGAGGAGCCCCTTACATaGATCTCAGTGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LEFKLEEVVGYFGSALPREEPLT*ISVRVG
Trigger: ACCCACCCTCACTGAGATCCATGTAAGGGGCTCCTC...TCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR TCA 90 bp TTCAATTTTCCACTCCGTCCACTGGCCAGTTGCAAACTTGTATTCAAAGAGGTCACCGCAGGAGGTCATTaGGCATGGTCTTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: FNFPLRPLASCKLVFKEVTAGGH*AWSSHC
Trigger: ACAATGGGAAGACCATGCTCAATGACCTCCTGCGGT...GACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000443265.5
CDS-3UTR GCA 90 bp TTCAATTTTCCACTCCGTCCACTGGCCAGTTGCAAACTTGTATTCAAAGAGGTCTTCATCTCCAGGTTCTaGTTGCAGTACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FNFPLRPLASCKLVFKEVFISRF*LQYACS
Trigger: GCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAA...GACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp GGTCTTCTGCCATTATTTGAGATCTATGCAGGCCACGTCTGTTACTGGTGGCACGCCCCTCTGGTCTTCTaGCATTATTTGAGATCTATG +
Preference number: 4 (lower is better)
Translates to: GLLPLFEIYAGHVCYWWHAPLVF*HYLRSM
Trigger: CATAGATCTCAAATAATGGCAGAAGACCAGAGGGGC...GTGCCACCAGTAACAGACGTGGCCTGCATAGATCTCAAATAATGGCAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CCA 90 bp TCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTATCACCTGGTTGAAGTaGGACTCCTTTACCACGAAG +
Preference number: 4 (lower is better)
Translates to: SASSSAPCGTCVFSELMSITWLK*DSFTTK
Trigger: CTTCGTGGTAAAGGAGTCCCACTTCAACCAGGTGAT...ACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp TTCAATTTTCCACTCCGTCCACTGGCCAGTTGCAAACTTGTATTCAAAGAGGTCCTCACAAGTTCCAGGTaGGAAGAGGAGCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: FNFPLRPLASCKLVFKEVLTSSR*EEEPLT
Trigger: TGTAAGGGGCTCCTCTTCCCACCTGGAACTTGTGAG...GACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR GCA 90 bp TGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTCAACTGGAAGCTCAGTaGCAGTTTGTACACATCCAT +
Preference number: 4 (lower is better)
Translates to: WDACPRLVLEFKLEEVVGQLEAQ*QFVHIH
Trigger: ATGGATGTGTACAAACTGGCACTGAGCTTCCAGTTG...ACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGCATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CCA 90 bp GAATACAAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCAGCAAGATGGCACCAAATACATAAATaGCATCTTTATAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: EYKHLVPAHSHGEVAARWHQIHK*HLYRPP
Trigger: TGGTGGCCTATAAAGATGCCATTTATGTATTTGGTG...CCATCTTGCTGCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR CAA 72 bp AAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTaGCCCAGAGAATACAAACATCTTGTCCCGGCACAC +
Preference number: 4 (lower is better)
Translates to: KLEEVVGYFGSA*PREYKHLVPAH
Trigger: GTGTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR GCA 90 bp TCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTATTTTGGCTCCGCTTTaGCCAGAGAATACAAACATC +
Preference number: 4 (lower is better)
Translates to: SASSSAPCGTCVFSELMSILAPL*PENTNI
Trigger: GATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAAT...ACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CCA 90 bp CATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGTCCACCAAATACATAAATaGCATCTTTATAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: HVIQPGVAVIASKDPQLVHQIHK*HLYRPP
Trigger: TGGTGGCCTATAAAGATGCCATTTATGTATTTGGTG...GACAAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CCA 90 bp TTCAATTTTCCACTCCGTCCACTGGCCAGTTGCAAACTTGTATTCAAAGAGGTCGGTTGTTGGTTATTTTaGCTCCGCTTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FNFPLRPLASCKLVFKEVGCWLF*LRFAQR
Trigger: TCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACC...GACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
3UTR CAA 72 bp GTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTaGTTGGTTATTTTGGCTCCGCTTTGCCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: VHVLSLNSNWKR*LVILAPLCPEN
Trigger: ATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR GCA 90 bp CTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTTGCCCAGACGTCCACTGGCCAGTTaGAAACTTGTATTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LEFKLEEVVGYFGSALPRRPLAS*KLVFKE
Trigger: CTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACG...TCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CCA 90 bp ACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATACATCACCAAATACATAAATaGCATCTTTATAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: TSGPFTPKFTSSQVRPIHHQIHK*HLYRPP
Trigger: TGGTGGCCTATAAAGATGCCATTTATGTATTTGGTG...ATGTATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS GCA 90 bp GCCATCCCGGGTCCACGCCGGATCGGCCGCGCTGTAAGCCCAACTTaGGGCCACCGCCCCGGGCCGGCTGGAGAAACCACATTTCCCGGC +
Preference number: 5 (lower is better)
Translates to: AIPGPRRIGRAVSPT*GHRPGPAGETTFPG
Trigger: GCCGGGAAATGTGGTTTCTCCAGCCGGCCCGGGGCGGTGGCCGCAAGTTGGGCTTACAGCGCGGCCGATCCGGCGTGGACCCGGGATGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414985.5
CDS CCA 90 bp CACTGTCCGAGCAGCTATGGTCGAAGTCCACGCTCGGGGCTACCTTaGACCGCGCGCCGCCTGCCAGGGCCGCAGCCCCGATCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: HCPSSYGRSPRSGLP*TARRLPGPQPRSAP
Trigger: GGGGGCAGATCGGGGCTGCGGCCCTGGCAGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCGTGGACTTCGACCATAGCTGCTCGGACAGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000645935.1
ENST00000646124.2
CDS-3UTR CAA 90 bp CAGGGTGGGCACCTCCTCGGAAGCACAGGCTCGCTCGGGCACTTCAGCCCCACCGGGACACGGGGGACTTaGCTGGCTTCTTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: QGGHLLGSTGSLGHFSPTGTRGT*LASSRP
Trigger: CGGCCGGGAAGAAGCCAGCAAAGTCCCCCGTGTCCC...GGTGGGGCTGAAGTGCCCGAGCGAGCCTGTGCTTCCGAGGAGGTGCCCACCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CAA 90 bp TCTCCCCACTTCTGGGTGGTGAGCCCATCACTGAGCCGTGGCCTCGCATCCACACGCTGTAAGCCCAACTaGCGGCCACCGCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SPHFWVVSPSLSRGLASTRCKPN*RPPPRA
Trigger: GGCCCGGGGCGGTGGCCGCAAGTTGGGCTTACAGCG...TGTGGATGCGAGGCCACGGCTCAGTGATGGGCTCACCACCCAGAAGTGGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR CAA 90 bp CGGCGCCCAGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTAGCGGCCAGGATAGCCTaGTGGGCTGGCCGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: RRPALRTACLRCGRPGSLAARIA*WAGRGC
Trigger: GCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC...TAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS GCA 90 bp CGGGCACCCACGAACTCGTCGCAGGGCGGGAGGCGCCGCCAGCGATaGACTGTTTCGAAGGGCCCGAAGTTGAGCGTCAGGTACTCGACA +
Preference number: 5 (lower is better)
Translates to: RAPTNSSQGGRRRQR*TVSKGPKLSVRYST
Trigger: TGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCGAAACAGTGCATCGCTGGCGGCGCCTCCCGCCCTGCGACGAGTTCGTGGGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000644435.1
ENST00000645935.1
ENST00000646124.2
CDS CCA 90 bp CGCCCTGAGGTACCATCAGCCACATTCTGTCCTCCCTCGGCGCCCTaGCCGACTCAAGCACTATGCCCCACGCACAGCCCACCACCCAGC +
Preference number: 5 (lower is better)
Translates to: RPEVPSATFCPPSAP*PTQALCPTHSPPPS
Trigger: GCTGGGTGGTGGGCTGTGCGTGGGGCATAGTGCTTGAGTCGGCCAGGGCGCCGAGGGAGGACAGAATGTGGCTGATGGTACCTCAGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS-3UTR CAA 90 bp GGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAAACGCTCGGGGCTACCTaGGACCGCGCGCCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: GAPEQVFSWDACPRLVLETLGAT*DRAPPA
Trigger: GGCAGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCGT...TTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414985.5
CDS-3UTR CAA 90 bp ACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTTCAATTTTCCACACGCTCGGGGCTACCTaGGACCGCGCGCCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: TVAPWADLATGNRPSIFHTLGAT*DRAPPA
Trigger: GGCAGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCGT...GTGGAAAATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000443265.5
CDS-3UTR CAA 90 bp TCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGCCACCACTGTGTGCTaGCTGCGCCGGGCACCCACG +
Preference number: 5 (lower is better)
Translates to: SVGRAGRHGDSSQWAGATATTVC*LRRAPT
Trigger: CGTGGGTGCCCGGCGCAGCAAGCACACAGTGGTGGC...TGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp CTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGTGTGGGCAGTGCTCCTTGAGTaGGCTCAGCTGCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: LLKGLKPAVVAGPARCVWAVLLE*AQLQPG
Trigger: GCCCGGCTGCAGCTGAGCCAACTCAAGGAGCACTGC...CCACACACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp AAGGGGACGTCCTTCACGTTCAGAGGGAGGCCTAGCCAGGGGCCTCCTCGCCAGTCGTTGGGCAGCGTGTaGTCGGCCGCACCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: KGTSFTFRGRPSQGPPRQSLGSV*SAAPPN
Trigger: GTTTGGGGGTGCGGCCGACAACACGCTGCCCAACGA...CTGGCGAGGAGGCCCCTGGCTAGGCCTCCCTCTGAACGTGAAGGACGTCCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS CCA 90 bp GGCCCGAAGTTGAGCGTCAGGTACTCGACACTGTCCGAGCAGCTATaGTCGAAGTCCACGCTCGGGGCTACCTTGGACCGCGCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: GPKLSVRYSTLSEQL*SKSTLGATLDRAPP
Trigger: AGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCGTGGACTTCGACCATAGCTGCTCGGACAGTGTCGAGTACCTGACGCTCAACTTCGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000645935.1
ENST00000646124.2
CDS CCA 90 bp CTGAGGTGGGTGCCAGGACCCCTTGGTGGGGACCTGGGAGTTCACTaGGGAGTGAGGATGCAGCGAGTCCTCGGGCGGCATGTTGACCTC +
Preference number: 5 (lower is better)
Translates to: LRWVPGPLGGDLGVH*GVRMQRVLGRHVDL
Trigger: GAGGTCAACATGCCGCCCGAGGACTCGCTGCATCCTCACTCCCCAGTGAACTCCCAGGTCCCCACCAAGGGGTCCTGGCACCCACCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS CCA 90 bp AGGGTGCCGCCCTGTGTGCCCAGCTTGGCAGCTGCAGGTGCGGGGTaGTTACTTGATCTCCTCAGCCTGACAGGGCGGCTCTGGATGTGG +
Preference number: 5 (lower is better)
Translates to: RVPPCVPSLAAAGAG*LLDLLSLTGRLWMW
Trigger: CCACATCCAGAGCCGCCCTGTCAGGCTGAGGAGATCAAGTAACCACCCCGCACCTGCAGCTGCCAAGCTGGGCACACAGGGCGGCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS-3UTR CAA 90 bp CGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGAGCGGCCAGGATAGCCTaGTGGGCTGGCCGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: RVLGRHVDLAVVDVAQHGAARIA*WAGRGC
Trigger: GCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC...TCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp TTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCCAGGCGGCCAGGATAGCCTaGTGGGCTGGCCGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: FGHEGPEHGFKVAGAGGQAARIA*WAGRGC
Trigger: GCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC...CTGGCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GTAGAGCGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGGCGGCCAGGATAGCCTaGTGGGCTGGCCGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: VERVLGRHVDLAVVDVAQAARIA*WAGRGC
Trigger: GCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC...CTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000439171.5
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp CTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGTGTGGCATGTTGGAGGAGCCTaGGTGACAGGCCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: LLKGLKPAVVAGPARCVWHVGGA*VTGPSA
Trigger: GGCACTGGGGCCTGTCACCAAGGCTCCTCCAACATG...CCACACACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCTCAGATGTCGCCCTCCAGGAGGGATTaGGAGGAGGCTGCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: GRHGDSSQWAGATGPQMSPSRRD*EEAALW
Trigger: CCACAGGGCAGCCTCCTCCAAATCCCTCCTGGAGGG...CGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS TCA 90 bp GCCCTGTGTGCCCAGCTTGGCAGCTGCAGGTGCGGGGTGGTTACTTaGTCTCCTCAGCCTGACAGGGCGGCTCTGGATGTGGCATCCCTG +
Preference number: 5 (lower is better)
Translates to: ALCAQLGSCRCGVVT*SPQPDRAALDVASL
Trigger: CAGGGATGCCACATCCAGAGCCGCCCTGTCAGGCTGAGGAGATCAAGTAACCACCCCGCACCTGCAGCTGCCAAGCTGGGCACACAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS GCA 90 bp GGGCCAATGTCCACTGGCTGGTCCAAGGGAGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATCTCCACTATCAGTGGAGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GPMSTGWSKGVRGGG*CFRRTISTISGEER
Trigger: CCTCTCCTCTCCACTGATAGTGGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS GCA 90 bp CATACTAGCATCAGCCTCGAGGTAGAGGTGGACAGCCCAGAAGGGTaGCGCCCTGTGTGCCCAGCTTGGCAGCTGCAGGTGCGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: HTSISLEVEVDSPEG*RPVCPAWQLQVRGG
Trigger: ACCACCCCGCACCTGCAGCTGCCAAGCTGGGCACACAGGGCGGCACCCTTCTGGGCTGTCCACCTCTACCTCGAGGCTGATGCTAGTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480895.1
ENST00000493460.2
CDS-3UTR CAA 90 bp GCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCAGTGCTCCTTGAGTaGGCTCAGCTGCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: AGRGCPSSNRVMSQNSAPAVLLE*AQLQPG
Trigger: GCCCGGCTGCAGCTGAGCCAACTCAAGGAGCACTGC...GGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CAA 90 bp ATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCACAGGCGGCCAGGATAGCCTaGTGGGCTGGCCGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: IALWAGRGCPSSNRVMSQAARIA*WAGRGC
Trigger: GCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC...CTGTGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GTAGAGCGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGGGGACACGGGGGACTTaGCTGGCTTCTTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: VERVLGRHVDLAVVDVAQGTRGT*LASSRP
Trigger: CGGCCGGGAAGAAGCCAGCAAAGTCCCCCGTGTCCC...CTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CAA 90 bp GCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGCCACCACCGCTGCGGATGTTGTaGTCCACCGTGCCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: ACCRPHPQTHRGGGQRPPPLRML*STVPPK
Trigger: CTTCGGGGGCACGGTGGACAACAACATCCGCAGCGG...TGGTGGCCTTTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS TCA 90 bp CCACCCAGCGTCTCATCTTCCACCCAGCTTGCTGTACCCCCTCGCTaGCCTCATGATCAAGCCCCCTCCAGGCCCACTGCATGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PPSVSSSTQLAVPPR*PHDQAPSRPTAWPL
Trigger: CAGAGGCCATGCAGTGGGCCTGGAGGGGGCTTGATCATGAGGTCAGCGAGGGGGTACAGCAAGCTGGGTGGAAGATGAGACGCTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS GCA 90 bp TGTCAGCTGCCTCCAGGATCTGCAATGGCAGGGACCTTGAGGCGCTaGCCCTTTCACCCACTCAGTGGGAGCTGCAGCCATGTGCACGGG +
Preference number: 5 (lower is better)
Translates to: CQLPPGSAMAGTLRR*PFHPLSGSCSHVHG
Trigger: CCCGTGCACATGGCTGCAGCTCCCACTGAGTGGGTGAAAGGGGCAGCGCCTCAAGGTCCCTGCCATTGCAGATCCTGGAGGCAGCTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS CCA 90 bp GCTGACCTCATGATCAAGCCCCCTCCAGGCCCACTGCATGGCCTCTaGTGCCTGCAGACATCACCAAGAGCCAGCAACCGGGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: ADLMIKPPPGPLHGL*CLQTSPRASNRGQH
Trigger: GTGCTGACCCCGGTTGCTGGCTCTTGGTGATGTCTGCAGGCACCAGAGGCCATGCAGTGGGCCTGGAGGGGGCTTGATCATGAGGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS-3UTR CAA 90 bp GCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGACGCTCGGGGCTACCTaGGACCGCGCGCCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: ASWQPQQERGPGILFPVRTLGAT*DRAPPA
Trigger: GGCAGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCGT...CCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR CAA 90 bp TGGAGGAGCCTTGGTGACAGGCCCCAGTGCCTGAGTCCACAACACGCCCAGGCCTCCAGTGCCTGCGTTTaGTCAGCTGCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: WRSLGDRPQCLSPQHAQASSACV*SAASRI
Trigger: GATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGA...GGCCTGGGCGTGTTGTGGACTCAGGCACTGGGGCCTGTCACCAAGGCTCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp TGTCGGCGCCCAGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTAGCTCTGCGCACTGCTaGTCTGAGATGTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: CRRPALRTACLRCGRPGSSSAHC*SEMWEA
Trigger: GGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT...ACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCTGGGCGCCGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GCAAAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGGCCACCACTGTGTGCTaGCTGCGCCGTACCGGGCAC +
Preference number: 5 (lower is better)
Translates to: AKIHSLSLYTVAPWADLAATTVC*LRRTGH
Trigger: GTGCCCGGTACGGCGCAGCAAGCACACAGTGGTGGC...CGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443265.5
CDS-3UTR CAA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCAACCGCAGGAGGTCATaGAGCATGGTCTTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: RQGRQARRFFTMGRRHRANRRRS*SMVFLV
Trigger: GACCAGGAAGACCATGCTCAATGACCTCCTGCGGTT...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS TCA 90 bp GCGGGAGGCGCCGCCAGCGATGCACTGTTTCGAAGGGCCCGAAGTTaGGCGTCAGGTACTCGACACTGTCCGAGCAGCTATGGTCGAAGT +
Preference number: 5 (lower is better)
Translates to: AGGAASDALFRRARS*ASGTRHCPSSYGRS
Trigger: ACTTCGACCATAGCTGCTCGGACAGTGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCGAAACAGTGCATCGCTGGCGGCGCCTCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000645935.1
ENST00000646124.2
CDS TCA 90 bp GCTTGGCAGCTGCAGGTGCGGGGTGGTTACTTGATCTCCTCAGCCTaGCAGGGCGGCTCTGGATGTGGCATCCCTGAGGCCGTGGTTATC +
Preference number: 5 (lower is better)
Translates to: AWQLQVRGGYLISSA*QGGSGCGIPEAVVI
Trigger: GATAACCACGGCCTCAGGGATGCCACATCCAGAGCCGCCCTGTCAGGCTGAGGAGATCAAGTAACCACCCCGCACCTGCAGCTGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS GCA 90 bp TGTCCAATGTCCACTGGCTGGTCCAAGGGAGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATCTCCACTATCAGTGGAGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: CPMSTGWSKGVRGGG*CFRRTISTISGEER
Trigger: CCTCTCCTCTCCACTGATAGTGGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452988.5
CDS GCA 90 bp CTACCAATGTCCACTGGCTGGTCCAAGGGAGTGCGAGGGGGCGGCTaGTGCTTCCGCCGCACAATCTCCACTATCAGTGGAGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LPMSTGWSKGVRGGG*CFRRTISTISGEER
Trigger: CCTCTCCTCTCCACTGATAGTGGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495142.6
CDS CCA 90 bp ATGTGCCTCATGATCAAGCCCCCTCCAGGCCCACTGCATGGCCTCTaGTGCCTGCAGACATCACCAAGAGCCAGCAACCGGGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: MCLMIKPPPGPLHGL*CLQTSPRASNRGQH
Trigger: GTGCTGACCCCGGTTGCTGGCTCTTGGTGATGTCTGCAGGCACCAGAGGCCATGCAGTGGGCCTGGAGGGGGCTTGATCATGAGGCACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000415817.2
ENST00000439171.5
CDS CCA 90 bp CAAACAAGTAGCTGGGGCCTGGTTAAGGAGCTGACTAAAGGAAGCTaGTCCGCCCGCACCCTCCCAGGGAAGGACAGGGAAGGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: QTSSWGLVKELTKGS*SARTLPGKDREGRS
Trigger: GCTGCGCCCTTCCCTGTCCTTCCCTGGGAGGGTGCGGGCGGACCAGCTTCCTTTAGTCAGCTCCTTAACCAGGCCCCAGCTACTTGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS-3UTR CAA 90 bp CCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAGCCACCACTGTGTGCTaGCTGCGCCGGGCACCCACG +
Preference number: 5 (lower is better)
Translates to: PRSRCSVGMRVHVLSLNSATTVC*LRRAPT
Trigger: CGTGGGTGCCCGGCGCAGCAAGCACACAGTGGTGGC...TGAATTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp CTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGTGTGGGCAAAGATCCACAGCTaGTCACTGTACACCGTGGCC +
Preference number: 5 (lower is better)
Translates to: LLKGLKPAVVAGPARCVWAKIHS*SLYTVA
Trigger: GGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGC...CCACACACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp AGCCGCGTGGAAGAGCCTCCCACTGGGCAGCTCCGAGGCAGGCTGGGTGGGCTGATCATGATCACCTGGTaGAAGTGGGACTCCTTTACC +
Preference number: 5 (lower is better)
Translates to: SRVEEPPTGQLRGRLGGLIMITW*KWDSFT
Trigger: GGTAAAGGAGTCCCACTTCAACCAGGTGATCATGAT...CAGCCCACCCAGCCTGCCTCGGAGCTGCCCAGTGGGAGGCTCTTCCACGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CAA 90 bp GGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGAGCTCTGCGCACTGCTaGTCTGAGATGTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GTLLASSRPSPDMHTGGLSSAHC*SEMWEA
Trigger: GGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT...CAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp AGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAAGGGACACGGGGGACTTaGCTGGCTTCTTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: RRGSASSSAPCGTCVFSEGTRGT*LASSRP
Trigger: CGGCCGGGAAGAAGCCAGCAAAGTCCCCCGTGTCCC...TTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GTGGTGGGGAGCCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGCACATCTCGGGACTTCTaGAAGCCAACCCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VVGSPGAGVQLGCVSTCSTSRDF*KPTRSS
Trigger: TGAGGAGCGGGTTGGCTTCAAGAAGTCCCGAGATGT...GCTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCCGGGGCTCCCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CAA 90 bp CTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGTGTGGACATCTCGGGACTTCTaGAAGCCAACCCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LLKGLKPAVVAGPARCVWTSRDF*KPTRSS
Trigger: TGAGGAGCGGGTTGGCTTCAAGAAGTCCCGAGATGT...CCACACACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS TCA 90 bp GATCCCAGCCTGTACCTCCGAGGCAGGCTGGGTGGGCTGCTTGGCTaGGGTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACTTCTT +
Preference number: 5 (lower is better)
Translates to: DPSLYLRGRLGGLLG*GGAKVQAKHISGLL
Trigger: AAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGGTACAGGCTGGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461510.1
CDS TCA 90 bp GTAGTAGGGGGCCGCAAACAAGTAGCTGGGGCCTGGTTAAGGAGCTaGCTAAAGGAAGCTGGTCCGCCCGCACCCTCCCAGGGAAGGACA +
Preference number: 5 (lower is better)
Translates to: VVGGRKQVAGAWLRS*LKEAGPPAPSQGRT
Trigger: TGTCCTTCCCTGGGAGGGTGCGGGCGGACCAGCTTCCTTTAGTCAGCTCCTTAACCAGGCCCCAGCTACTTGTTTGCGGCCCCCTACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS TCA 90 bp CTGCGTTTTGTCAGCTGCCTCCAGGATCTGCAATGGCAGGGACCTTaGGGCGCTGCCCCTTTCACCCACTCAGTGGGAGCTGCAGCCATG +
Preference number: 5 (lower is better)
Translates to: LRFVSCLQDLQWQGP*GAAPFTHSVGAAAM
Trigger: CATGGCTGCAGCTCCCACTGAGTGGGTGAAAGGGGCAGCGCCTCAAGGTCCCTGCCATTGCAGATCCTGGAGGCAGCTGACAAAACGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS CCA 90 bp CGTCCTCTGGGCAGTTGTGAGGGTCAGGAACCCACTGGTTCCTCCTaGCTGCAAACCCCTCCTTGCCAGCTGCCAACTGCTTCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RPLGSCEGQEPTGSS*LQTPPCQLPTASES
Trigger: GCTCTCTGAAGCAGTTGGCAGCTGGCAAGGAGGGGTTTGCAGCCAGGAGGAACCAGTGGGTTCCTGACCCTCACAACTGCCCAGAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS-3UTR CAA 90 bp GCCCAGGCAGATTCGCTGGTGCAGCGCAAGTCTGCTAAGCCTCCTCCCGCATGTTCGAAGGGCCCGAAGTaGAGCGTCAGGTACTCGACA +
Preference number: 5 (lower is better)
Translates to: AQADSLVQRKSAKPPPACSKGPK*SVRYST
Trigger: TGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCGA...ACATGCGGGAGGAGGCTTAGCAGACTTGCGCTGCACCAGCGAATCTGCCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR CAA 90 bp TCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGAGCAGGTGTTCAGTaGGGATGCGTGTCCACGTCT +
Preference number: 5 (lower is better)
Translates to: SVGRAGRHGDSSQWAGATGAGVQ*GCVSTS
Trigger: AGACGTGGACACGCATCCCAACTGAACACCTGCTCC...TGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp TCAAGCAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCGCAGTGCTCCTTGAGTaGGCTCAGCTGCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SSNRVMSQNSAPAPSRYAAVLLE*AQLQPG
Trigger: GCCCGGCTGCAGCTGAGCCAACTCAAGGAGCACTGC...GGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGTTCAGGCAGTGCTCCTaGAGTTGGCTCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GTLLASSRPSPDMHTGGLFRQCS*SWLSCS
Trigger: GCTGCAGCTGAGCCAACTCAAGGAGCACTGCCTGAA...CAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GCTTCATGGCAGCCACAACAAGAAAGGGGTCCTGGAATCCTGTTCCCAGTAAGGGCGGCCAGGATAGCCTaGTGGGCTGGCCGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: ASWQPQQERGPGILFPVRAARIA*WAGRGC
Trigger: GCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC...CCTTACTGGGAACAGGATTCCAGGACCCCTTTCTTGTTGTGGCTGCCATGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GCGGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGGGCAACTTGGAGACCTaGGTGAACTGGTGCACAATG +
Preference number: 5 (lower is better)
Translates to: AARIALWAGRGCPSSNRVGNLET*VNWCTM
Trigger: CATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCC...CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GCACCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCCGCAGGGTGGGCAACTaGGAGACCTTGGTGAACTGG +
Preference number: 5 (lower is better)
Translates to: APTAIGMRIAGSLLSRQGRRVGN*ETLVNW
Trigger: CCAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCG...GCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp CCCACTGCCATAGGCATGCGCATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCGCAGGGTGGGCAACTaGGAGACCTTGGTGAACTGG +
Preference number: 5 (lower is better)
Translates to: PTAIGMRIAGSLLSRQGRRRVGN*ETLVNW
Trigger: CCAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCG...CCTGCCCTGCCTACTGAGAAGACTACCGGCTATGCGCATGCCTATGGCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GTAGAGCGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGAGCTCTGCGCACTGCTaGTCTGAGATGTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VERVLGRHVDLAVVDVAQSSAHC*SEMWEA
Trigger: GGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT...CTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp CGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCATGTTGGAGGAGCCTaGGTGACAGGCCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: RHVDLAVVDVAQHGLEGLHVGGA*VTGPSA
Trigger: GGCACTGGGGCCTGTCACCAAGGCTCCTCCAACATG...CAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CAA 90 bp CAAGCCCCACTGGGTGGGAGGCCCAAAGTCTCTCCCCACTTCTGGGTGGTGAGCGGCAGGAGCCACATCTaGTGGAAACTGGGTAGATGG +
Preference number: 5 (lower is better)
Translates to: QAPLGGRPKVSPHFWVVSGRSHI*WKLGRW
Trigger: CCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCC...GCTCACCACCCAGAAGTGGGGAGAGACTTTGGGCCTCCCACCCAGTGGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS-3UTR CAA 90 bp AGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAACCGCTGCGGATGTTGTaGTCCACCGTGCCCCCGAAG +
Preference number: 5 (lower is better)
Translates to: RRGSASSSAPCGTCVFSEPLRML*STVPPK
Trigger: CTTCGGGGGCACGGTGGACAACAACATCCGCAGCGG...TTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS TCA 90 bp AGTTCACTGGGGAGTGAGGATGCAGCGAGTCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SSLGSEDAASPRAAC*PRRSRCSAAWTRRP
Trigger: AGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTGCATCCTCACTCCCCAGTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS GCA 90 bp CAGGTATGCCTTCATGTCCAATGTCCACTGGCTGGTCCAAGGGAGTaGGAGGGGGCGGCTGCTGCTTCCGCCGCACAATCTCCACTATCA +
Preference number: 5 (lower is better)
Translates to: QVCLHVQCPLAGPRE*EGAAAASAAQSPLS
Trigger: TGATAGTGGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGCACTCCCTTGGACCAGCCAGTGGACATTGGACATGAAGGCATACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452988.5
CDS GCA 90 bp TTAATGAGGATCCCAGCCTGTACCTCCGAGGCAGGCTGGGTGGGCTaGTTGGCTGAGGTGGTGCCAAAGTCCAGGCCAAACACATCTCGG +
Preference number: 5 (lower is better)
Translates to: LMRIPACTSEAGWVG*LAEVVPKSRPNTSR
Trigger: CCGAGATGTGTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGGTACAGGCTGGGATCCTCATTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461510.1
CDS GCA 90 bp CTCTGGGCAGTTGTGAGGGTCAGGAACCCACTGGTTCCTCCTGGCTaGAAACCCCTCCTTGCCAGCTGCCAACTGCTTCAGAGAGCACCA +
Preference number: 5 (lower is better)
Translates to: LWAVVRVRNPLVPPG*KPLLASCQLLQRAP
Trigger: TGGTGCTCTCTGAAGCAGTTGGCAGCTGGCAAGGAGGGGTTTGCAGCCAGGAGGAACCAGTGGGTTCCTGACCCTCACAACTGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS GCA 90 bp TCCCATGATGAGAGAGACTCTGCTAGCAACTGGGACCCAGCACTGTaGCACTGTGTTCTAGGAGGAAAGGCAGGGCCCTGGAGCACGGGG +
Preference number: 5 (lower is better)
Translates to: SHDERDSASNWDPAL*HCVLGGKAGPWSTG
Trigger: CCCCGTGCTCCAGGGCCCTGCCTTTCCTCCTAGAACACAGTGGCACAGTGCTGGGTCCCAGTTGCTAGCAGAGTCTCTCTCATCATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS GCA 90 bp CGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGGATCTaGAATGGCAGGGACCTTGAGGCGCTGCCCCTTTCACCCACTCAG +
Preference number: 5 (lower is better)
Translates to: RFMSSACVLSAASRI*NGRDLEALPLSPTQ
Trigger: CTGAGTGGGTGAAAGGGGCAGCGCCTCAAGGTCCCTGCCATTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS CCA 90 bp GCGAGGGGGCGGCTGCTGCTTCCGCCGCACAATCTCCACTATCAGTaGAGAGGAGAGGCGCTCGAACTCCTTCATCATGATCACCTTGAG +
Preference number: 5 (lower is better)
Translates to: ARGRLLLPPHNLHYQ*RGEALELLHHDHLE
Trigger: CTCAAGGTGATCATGATGAAGGAGTTCGAGCGCCTCTCCTCTCCACTGATAGTGGAGATTGTGCGGCGGAAGCAGCAGCCGCCCCCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000491432.5
CDS CCA 90 bp GATGGAGTCTTAATGAGGATCCCAGCCTGTACCTCCGAGGCAGGCTaGGTGGGCTGCTTGGCTGAGGTGGTGCCAAAGTCCAGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: DGVLMRIPACTSEAG*VGCLAEVVPKSRPN
Trigger: GTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGGTACAGGCTGGGATCCTCATTAAGACTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461510.1
CDS CCA 90 bp TCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTaGATCAGAGATGTGCCTGGGGGTAGGAGGGTCCCTGAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: SQNSAPAPSRYAFMS*IRDVPGGRRVPEQV
Trigger: TACCTGCTCAGGGACCCTCCTACCCCCAGGCACATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS-3UTR CAA 90 bp CCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTTGGAGGTTGTTGGTTATTTaGGCTCCGCTTTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: PAAAAGSATAGWATWRPWRLLVI*APLCPE
Trigger: CTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCT...CCAAGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CAA 90 bp GTAGAGCGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGGGAGCAGGTGTTCAGTaGGGATGCGTGTCCACGTCT +
Preference number: 5 (lower is better)
Translates to: VERVLGRHVDLAVVDVAQGAGVQ*GCVSTS
Trigger: AGACGTGGACACGCATCCCAACTGAACACCTGCTCC...CTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CAA 90 bp CAACAGAGTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGCAGTGCTCCTTGAGTaGGCTCAGCTGCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: QQSDVTEFRARSLQVCLHAVLLE*AQLQPG
Trigger: GCCCGGCTGCAGCTGAGCCAACTCAAGGAGCACTGC...ATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCACTCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GCGGCCAGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGTTCATCATGATCACCTaGAGTTGGCTCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AARIALWAGRGCPSSNRVFIMIT*SWLSCS
Trigger: GCTGCAGCTGAGCCAACTCAAGGTGATCATGATGAA...CACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCTGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR CAA 90 bp TGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGGTCCAGTGCCTGCGTTTaGTCAGCTGCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: CRQCRFMSSACVLSAASRSSACV*SAASRI
Trigger: GATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGA...CCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp AGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTATGATGTCCCATGTTGGAGGAGCCTaGGTGACAGGCCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: SSAHCLSEMWEARESMMSHVGGA*VTGPSA
Trigger: GGCACTGGGGCCTGTCACCAAGGCTCCTCCAACATG...GGACATCATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CAA 90 bp TGTCCAGCAGCAGCTGCTGGCTCAGCGACCGCAGGGTGGGCAACTTGGAGACCTAGGTGGAGGCAGGAGTaGACAGCATGGATAGAGACA +
Preference number: 5 (lower is better)
Translates to: CPAAAAGSATAGWATWRPRWRQE*TAWIET
Trigger: TGTCTCTATCCATGCTGTCAACTCCTGCCTCCACCT...AGGTCTCCAAGTTGCCCACCCTGCGGTCGCTGAGCCAGCAGCTGCTGCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CAA 90 bp AGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCAAGCTCAGTGCCAGTTaGTACACATCCATGATGAGC +
Preference number: 5 (lower is better)
Translates to: RQGRQARRFFTMGRRHRAKLSAS*YTSMMS
Trigger: GCTCATCATGGATGTGTACAAACTGGCACTGAGCTT...GGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTGCAGCTCACACTCCTTGTGCGGAGCAGGTGTTCAGTaGGGATGCGTGTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: GAGVQLGCVSTCSSHSLCGAGVQ*GCVSTC
Trigger: GCAGGTGGACACGCATCCCAACTGAACACCTGCTCC...GCACAAGGAGTGTGAGCTGCAGGTGGACACGCATCCCAACTGAACACCTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CAA 90 bp CCCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAATTCATCGTTGGGCAGCGTGTaGTCGGCCGCACCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: PRSRCSVGMRVHVLSLNSSLGSV*SAAPPN
Trigger: GTTTGGGGGTGCGGCCGACAACACGCTGCCCAACGA...TGAATTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS CCA 90 bp GTCTGTGCTCAACTGTCACACAAAGCAATGACCCACCCCGTCCTCTaGGCAGTTGTGAGGGTCAGGAACCCACTGGTTCCTCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: VCAQLSHKAMTHPVL*AVVRVRNPLVPPGC
Trigger: GCAGCCAGGAGGAACCAGTGGGTTCCTGACCCTCACAACTGCCCAGAGGACGGGGTGGGTCATTGCTTTGTGTGACAGTTGAGCACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS-3UTR CAA 90 bp TTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTGCAAAGATCCACAGCTaGTCACTGTACACCGTGGCC +
Preference number: 5 (lower is better)
Translates to: LSLYTVAPWADLATGNRPAKIHS*SLYTVA
Trigger: GGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGC...AGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CAA 90 bp AGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCATTCAGGCAGTGCTCCTaGAGTTGGCTCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RIALWAGRGCPSSNRVMSFRQCS*SWLSCS
Trigger: GCTGCAGCTGAGCCAACTCAAGGAGCACTGCCTGAA...TGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GTGATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTGGTTCAGGCAGTGCTCCTaGAGTTGGCTCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VMSQNSAPAPSRYAFMSWFRQCS*SWLSCS
Trigger: GCTGCAGCTGAGCCAACTCAAGGAGCACTGCCTGAA...CCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CAA 90 bp CTGCTCAAGGGGCTGAAGCCAGCAGTGGTGGCCGGGCCAGCAAGGTGTGTGTGGATCATGATCACCTGGTaGAAGTGGGACTCCTTTACC +
Preference number: 5 (lower is better)
Translates to: LLKGLKPAVVAGPARCVWIMITW*KWDSFT
Trigger: GGTAAAGGAGTCCCACTTCAACCAGGTGATCATGAT...CCACACACACCTTGCTGGCCCGGCCACCACTGCTGGCTTCAGCCCCTTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGCCACAACAAGAAAGGGGTCCATGATCACCTTGAGTaGGCTCAGCTGCAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: GHFPKELWLHGSHNKKGVHDHLE*AQLQPG
Trigger: GCCCGGCTGCAGCTGAGCCAACTCAAGGTGATCATG...GACCCCTTTCTTGTTGTGGCTGCCATGAAGCCACAGCTCCTTGGGGAAGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS-3UTR CAA 90 bp TGGCTCCCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCGGCAACTTGGAGACCTaGGTGAACTGGTGCACAATG +
Preference number: 5 (lower is better)
Translates to: WLPALEWIHMGPSLGQEGGNLET*VNWCTM
Trigger: CATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCC...GCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GTCCACAACACGCCCAGGCCACAGAAGCCAGGCCAAGCCCCACTGGGTGGGAGGGGCTTTAATGGAGGCTaGTCTGTGACAGAATACTCA +
Preference number: 5 (lower is better)
Translates to: VHNTPRPQKPGQAPLGGRGFNGG*SVTEYS
Trigger: TGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC...CCTCCCACCCAGTGGGGCTTGGCCTGGCTTCTGTGGCCTGGGCGTGTTGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGGACCCCTCCAGGAGGGATTaGGAGGAGGCTGCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: GFNGGLSVTEYSARDTGDPSRRD*EEAALW
Trigger: CCACAGGGCAGCCTCCTCCAAATCCCTCCTGGAGGG...GTCCCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000646124.2
CDS TCA 90 bp AGAGAAGTCCAGAGACTGATCACCGTGACCCTGGGCCATCAGACCTaGCATCCTAGCCCGAAAGAGGTGCCCCATGTCCACCCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: REVQRLITVTLGHQT*HPSPKEVPHVHPQK
Trigger: TTTCTGGGGGTGGACATGGGGCACCTCTTTCGGGCTAGGATGTCAGGTCTGATGGCCCAGGGTCACGGTGATCAGTCTCTGGACTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS GCA 90 bp GGAGTAAAGTTGTGCAGAGACCATTGCAGGTCACTGTGTTCACGCTaGCCAGTCAGAGCATCCCCACAGCTGAGTCCCCATCCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: GVKLCRDHCRSLCSR*PVRASPQLSPHPGS
Trigger: GCTCCCAGGATGGGGACTCAGCTGTGGGGATGCTCTGACTGGGCAGCGTGAACACAGTGACCTGCAATGGTCTCTGCACAACTTTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643578.1
CDS GCA 90 bp CCAGGCAGTCCTGCTCTCTGGGGAGTAAAGTTGTGCAGAGACCATTaGAGGTCACTGTGTTCACGCTGCCCAGTCAGAGCATCCCCACAG +
Preference number: 5 (lower is better)
Translates to: PGSPALWGVKLCRDH*RSLCSRCPVRASPQ
Trigger: CTGTGGGGATGCTCTGACTGGGCAGCGTGAACACAGTGACCTGCAATGGTCTCTGCACAACTTTACTCCCCAGAGAGCAGGACTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643578.1
CDS CCA 90 bp GGTTGTTGTAGAAGCCGTAGTAGTAGGGGGCCGCAAACAAGTAGCTaGGGCCTGGTTAAGGAGCTGACTAAAGGAAGCTGGTCCGCCCGC +
Preference number: 5 (lower is better)
Translates to: GCCRSRSSRGPQTSS*GLVKELTKGSWSAR
Trigger: GCGGGCGGACCAGCTTCCTTTAGTCAGCTCCTTAACCAGGCCCCAGCTACTTGTTTGCGGCCCCCTACTACTACGGCTTCTACAACAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS CCA 90 bp CCTCAGCCTGACAGGGCGGCTCTGGATGTGGCATCCCTGAGGCCGTaGTTATCTCCTCCTGGAAGCTTCTTTCTAGCTTCCCATGATGAG +
Preference number: 5 (lower is better)
Translates to: PQPDRAALDVASLRP*LSPPGSFFLASHDE
Trigger: CTCATCATGGGAAGCTAGAAAGAAGCTTCCAGGAGGAGATAACCACGGCCTCAGGGATGCCACATCCAGAGCCGCCCTGTCAGGCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS-3UTR CAA 90 bp TGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTGCCACCACTGTGTGCTaGCTGCGCCGGGCACCCACG +
Preference number: 5 (lower is better)
Translates to: WDACPRLVLEFKLEEVVGATTVC*LRRAPT
Trigger: CGTGGGTGCCCGGCGCAGCAAGCACACAGTGGTGGC...ACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGCATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GGGTGTGGCAGGAGCCACATCTTGTGGAAACTGGGTAGATGGGTGTGTGGCCCCAACCGCAGGAGGTCATaGAGCATGGTCTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: GCGRSHILWKLGRWVCGPNRRRS*SMVFPL
Trigger: CAATGGGAAGACCATGCTCAATGACCTCCTGCGGTT...GGGGCCACACACCCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646124.2
CDS-3UTR CAA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACATCCAGTGCCTGCGTTTaGTCAGCTGCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTSSACV*SAASRI
Trigger: GATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGA...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGCGCAGGGTGGGCAACTaGGAGACCTTGGTGAACTGG +
Preference number: 5 (lower is better)
Translates to: DLGELVHNDVQAVPLHVQRRVGN*ETLVNW
Trigger: CCAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCG...CTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS GCA 90 bp CCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTaGAGTACGCCTGCAGCCGGTTGTTGTAGAAGCCGTAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: PAARSAPSRSSPGSA*STPAAGCCRSRSSR
Trigger: CCTACTACTACGGCTTCTACAACAACCGGCTGCAGGCGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS GCA 90 bp TGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTaGGTTTTGTCAGCTGCCTCCAGGATCTGCAATGGCAGGGACCTT +
Preference number: 5 (lower is better)
Translates to: WCTMMCRQCRFMSSA*VLSAASRICNGRDL
Trigger: AAGGTCCCTGCCATTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS GCA 90 bp GAACTGGTGCACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTaGCTGCGTTTTGTCAGCTGCCTCCAGGATCTGCAATGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: ELVHNDVQAVPLHVQ*LRFVSCLQDLQWQG
Trigger: TCCCTGCCATTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTGCACCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS CCA 90 bp CTGAAGACTTCAGAACAGATCCTGGCCTGGCAGGGCTATGCCATCTaGCTCCATGCTGAGCCCCAGGCCCTTGACAATTTCCCTCATCCT +
Preference number: 5 (lower is better)
Translates to: LKTSEQILAWQGYAI*LHAEPQALDNFPHP
Trigger: AGGATGAGGGAAATTGTCAAGGGCCTGGGGCTCAGCATGGAGCCAGATGGCATAGCCCTGCCAGGCCAGGATCTGTTCTGAAGTCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643578.1
CDS CCA 90 bp TCGCCACTCTGGGCCACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTaGAGGCCAATTGTCCACATGTCATTCAACCGTCCTTCAATTTTC +
Preference number: 5 (lower is better)
Translates to: SPLWATSSQQVSSRS*RPIVHMSFNRPSIF
Trigger: GAAAATTGAAGGACGGTTGAATGACATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCCCAGAGTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644435.1
CDS-3UTR CAA 90 bp GTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTTCAATTTTCCACTCCAACCGCAGGAGGTCATaGAGCATGGTCTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: VAPWADLATGNRPSIFHSNRRRS*SMVFPL
Trigger: CAATGGGAAGACCATGCTCAATGACCTCCTGCGGTT...GGAGTGGAAAATTGAAGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000443265.5
CDS-3UTR CAA 90 bp CCAGCACTAGAGTGGATCCACATGGGGCCCTCACTAGGGCAAGAGGGCAGCCCTCCGTCCACTGGCCAGTaGCAAACTTGTATTCAAAGA +
Preference number: 5 (lower is better)
Translates to: PALEWIHMGPSLGQEGSPPSTGQ*QTCIQR
Trigger: TCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGG...AGGGCTGCCCTCTTGCCCTAGTGAGGGCCCCATGTGGATCCACTCTAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp CACACACCTGCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGGCAAAGATCCACAGCTaGTCACTGTACACCGTGGCC +
Preference number: 5 (lower is better)
Translates to: HTPAYTQRRAGHFPKELWAKIHS*SLYTVA
Trigger: GGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGC...CCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGCAGGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp TTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGGGATCCATGCGTGTCCACGTCTaGTCCTTGAATTCAAACTGG +
Preference number: 5 (lower is better)
Translates to: LLASSRPSPDMHTGGLGSMRVHV*SLNSNW
Trigger: CCAGTTTGAATTCAAGGACAAGACGTGGACACGCAT...GGATCCCAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp ATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACAGCTCTGCGCACTGCTaGTCTGAGATGTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: ICSTFCTVTFISRFCLQYSSAHC*SEMWEA
Trigger: GGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT...GTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAGGGCCTCAGATGTCGGGCTTTAATGGAGGCTaGTCTGTGACAGAATACTCA +
Preference number: 5 (lower is better)
Translates to: GRHGDSSQWAGATGPQMSGFNGG*SVTEYS
Trigger: TGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC...CGACATCTGAGGCCCTGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CAA 90 bp TATTCACGAGGAAGGGGACGTCCTTCACGTTCAGAGGGAGGCCTAGCCAGGGGCTCGCCAGGCCTTATCTaGCTAAGCTGTAGCCATATC +
Preference number: 5 (lower is better)
Translates to: YSRGRGRPSRSEGGLARGSPGLI*LSCSHI
Trigger: GATATGGCTACAGCTTAGCAAGATAAGGCCTGGCGA...GCCCCTGGCTAGGCCTCCCTCTGAACGTGAAGGACGTCCCCTTCCTCGTGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS TCA 90 bp TCCCCATGTGTGAGAGGTGTTGATCACAGGACCTGTTTCAGGGGGTaGTGGAGTCTTAATGAGGATCCCAGCCTGTACCTCCGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SPCVRGVDHRTCFRG*WSLNEDPSLYLRGR
Trigger: CCTGCCTCGGAGGTACAGGCTGGGATCCTCATTAAGACTCCATCACCCCCTGAAACAGGTCCTGTGATCAACACCTCTCACACATGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461510.1
CDS-3UTR CAA 90 bp ATGCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTCGCTGTAAGCCCAACTaGCGGCCACCGCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: MRVHVLSLNSNWKRLLVIRCKPN*RPPPRA
Trigger: GGCCCGGGGCGGTGGCCGCAAGTTGGGCTTACAGCG...AATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414985.5
CDS-3UTR CAA 90 bp TTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTCCTCCGTCCACTGGCCAGTaGCAAACTTGTATTCAAAGA +
Preference number: 5 (lower is better)
Translates to: LSLYTVAPWADLATGNRPPSTGQ*QTCIQR
Trigger: TCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGG...AGGACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GGGTGGGCTGCTTGGCTGAGGTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGAACTGGAAGAGGTTGTaGGTTATTTTGGCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: GWAAWLRWCQSPGQTHLGNWKRL*VILAPL
Trigger: AAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTT...CCCGAGATGTGTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR CAA 90 bp TCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACAATGGGCAGGCGCCACAAACTGGAAGAGGTTGTaGGTTATTTTGGCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: SVGRAGRHGDSSQWAGATNWKRL*VILAPL
Trigger: AAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTT...TGTGGCGCCTGCCCATTGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp CACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTGGAGGCCAATTGTCCACATGTCATGCGTGTCCACGTCTaGTCCTTGAATTCAAACTGG +
Preference number: 5 (lower is better)
Translates to: HLLPAGELSVLEANCPHVMRVHV*SLNSNW
Trigger: CCAGTTTGAATTCAAGGACAAGACGTGGACACGCAT...GACATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp TTTGCCCAGAGAATACAAACATCTTGTCCCGGCACACAGCCACGGGGAAGTTGCGGAGCAGGTGTTCAGTaGGGATGCGTGTCCACGTCT +
Preference number: 5 (lower is better)
Translates to: FAQRIQTSCPGTQPRGSCGAGVQ*GCVSTS
Trigger: AGACGTGGACACGCATCCCAACTGAACACCTGCTCC...GCAACTTCCCCGTGGCTGTGTGCCGGGACAAGATGTTTGTATTCTCTGGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp CGAGTCCTCGGGCGGCATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGAATCATGATCACCTGGTaGAAGTGGGACTCCTTTACC +
Preference number: 5 (lower is better)
Translates to: RVLGRHVDLAVVDVAQHGIMITW*KWDSFT
Trigger: GGTAAAGGAGTCCCACTTCAACCAGGTGATCATGAT...TCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GAGATGTTCACCTGCCCATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTCCAGTGCCTGCGTTTaGTCAGCTGCCTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: EMFTCPSSGMKDRNMASKSSACV*SAASRI
Trigger: GATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGA...CTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGATGGGCAGGTGAACATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp TGTGGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGCGCAGGGTGGGCAACTaGGAGACCTTGGTGAACTGG +
Preference number: 5 (lower is better)
Translates to: CGFNGGLSVTEYSARDTGRRVGN*ETLVNW
Trigger: CCAGTTCACCAAGGTCTCCAAGTTGCCCACCCTGCG...CCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp CGTTGGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAGGCTTTAATGGAGGCTaGTCTGTGACAGAATACTCA +
Preference number: 5 (lower is better)
Translates to: RWAACCRPHPQTHRGGGQGFNGG*SVTEYS
Trigger: TGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCC...TTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCCAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CAA 90 bp CATGTTGACCTCGCCGTAGTAGATGTAGCGCAGCATGGACTCGAAGGCCTGCCTAGGTGGAGGCAGGAGTaGACAGCATGGATAGAGACA +
Preference number: 5 (lower is better)
Translates to: HVDLAVVDVAQHGLEGLPRWRQE*TAWIET
Trigger: TGTCTCTATCCATGCTGTCAACTCCTGCCTCCACCT...AGGCAGGCCTTCGAGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000642151.1
CDS-3UTR CAA 90 bp TCTGCTTCATCATCCGCTCCCTGTGGGACCTGTGTCTTCAGTGAATTAATGAGTTCGTTGGGCAGCGTGTaGTCGGCCGCACCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: SASSSAPCGTCVFSELMSSLGSV*SAAPPN
Trigger: GTTTGGGGGTGCGGCCGACAACACGCTGCCCAACGA...ACTCATTAATTCACTGAAGACACAGGTCCCACAGGGAGCGGATGATGAAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp TGGGCAGCGTGTTGTCGGCCGCACCCCCAAACACATAGAGGTGGCGGTCAAAGGTGGCCAGTTGCAAACTaGTATTCAAAGAGGTCGTTT +
Preference number: 5 (lower is better)
Translates to: WAACCRPHPQTHRGGGQRWPVAN*YSKRSF
Trigger: AAACGACCTCTTTGAATACAAGTTTGCAACTGGCCA...CCTTTGACCGCCACCTCTATGTGTTTGGGGGTGCGGCCGACAACACGCTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CAA 90 bp GGCCACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTGGAGGCCAATTGTCCACATTATTTTGGCTCCGCTTaGCCCAGAGAATACAAACAT +
Preference number: 5 (lower is better)
Translates to: GHLLPAGELSVLEANCPHYFGSA*PREYKH
Trigger: ATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATA...ATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GGGACTTTGCTGGCTTCTTCCCGGCCGAGCCCTGACATGCACACAGGTGGACTGTATTTTGGCTCCGCTTaGCCCAGAGAATACAAACAT +
Preference number: 5 (lower is better)
Translates to: GTLLASSRPSPDMHTGGLYFGSA*PREYKH
Trigger: ATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATA...CAGTCCACCTGTGTGCATGTCAGGGCTCGGCCGGGAAGAAGCCAGCAAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GCATACACCCAAAGGAGAGCAGGTCACTTCCCCAAGGAGCTGTGGCTTCATGGCAGGTTGTTGGTTATTTaGGCTCCGCTTTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: AYTQRRAGHFPKELWLHGRLLVI*APLCPE
Trigger: CTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCT...GCCATGAAGCCACAGCTCCTTGGGGAAGTGACCTGCTCTCCTTTGGGTGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp AGGATAGCCTTGTGGGCTGGCCGTGGGTGCCCGTCAAGCAACAGAGTGATGTCAATCATGATCACCTGGTaGAAGTGGGACTCCTTTACC +
Preference number: 5 (lower is better)
Translates to: RIALWAGRGCPSSNRVMSIMITW*KWDSFT
Trigger: GGTAAAGGAGTCCCACTTCAACCAGGTGATCATGAT...TGACATCACTCTGTTGCTTGACGGGCACCCACGGCCAGCCCACAAGGCTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415354.6
ENST00000439171.5
ENST00000642151.1
CDS-3UTR CAA 90 bp TCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGGGCAACTTGGAGACCTaGGTGAACTGGTGCACAATG +
Preference number: 5 (lower is better)
Translates to: SAARSAPSRSSPGSACSTGNLET*VNWCTM
Trigger: CATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCC...CGTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GTGGGCAACTTGGAGACCTTGGTGAACTGGTGCACAATGATGTGCAGGCAGTGCGGCAACTTGGAGACCTaGGTGAACTGGTGCACAATG +
Preference number: 5 (lower is better)
Translates to: VGNLETLVNWCTMMCRQCGNLET*VNWCTM
Trigger: CATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCC...GCACTGCCTGCACATCATTGTGCACCAGTTCACCAAGGTCTCCAAGTTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000452988.5
ENST00000642151.1
CDS-3UTR CAA 90 bp ATCTGCAGCACGTTCTGCACCGTCACGTTCATCTCCAGGTTCTGCTTGCAGTACGGCAGGAGCCACATCTaGTGGAAACTGGGTAGATGG +
Preference number: 5 (lower is better)
Translates to: ICSTFCTVTFISRFCLQYGRSHI*WKLGRW
Trigger: CCATCTACCCAGTTTCCACAAGATGTGGCTCCTGCC...GTACTGCAAGCAGAACCTGGAGATGAACGTGACGGTGCAGAACGTGCTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415817.2
CDS CCA 90 bp AGCTTCTTTCTAGCTTCCCATGATGAGAGAGACTCTGCTAGCAACTaGGACCCAGCACTGTGCCACTGTGTTCTAGGAGGAAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SFFLASHDERDSASN*DPALCHCVLGGKAG
Trigger: CCCTGCCTTTCCTCCTAGAACACAGTGGCACAGTGCTGGGTCCCAGTTGCTAGCAGAGTCTCTCTCATCATGGGAAGCTAGAAAGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS-3UTR CAA 90 bp ACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGTTCGAAGGGCCCGAAGTaGAGCGTCAGGTACTCGACA +
Preference number: 5 (lower is better)
Translates to: TCHSTWRCRHSQQRSTACSKGPK*SVRYST
Trigger: TGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCGA...ACAAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000443265.5
CDS-3UTR CAA 90 bp AGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGACTGGCAACCGTTGGCCAGTTGCAAACTaGTATTCAAAGAGGTCGTTT +
Preference number: 5 (lower is better)
Translates to: SLSLYTVAPWADLATGNRWPVAN*YSKRSF
Trigger: AAACGACCTCTTTGAATACAAGTTTGCAACTGGCCA...ACGGTTGCCAGTCGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GAGAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTTGGCCAGTTGCAAACTaGTATTCAAAGAGGTCGTTT +
Preference number: 5 (lower is better)
Translates to: ERVMTGGGLLHHPLPVGPWPVAN*YSKRSF
Trigger: AAACGACCTCTTTGAATACAAGTTTGCAACTGGCCA...AGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp ATAGCCGGTAGTCTTCTCAGTAGGCAGGGCAGGCAGGCACGGCGATTCTTCACACCGTCCACTGGCCAGTaGCAAACTTGTATTCAAAGA +
Preference number: 5 (lower is better)
Translates to: IAGSLLSRQGRQARRFFTPSTGQ*QTCIQR
Trigger: TCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGG...TGTGAAGAATCGCCGTGCCTGCCTGCCCTGCCTACTGAGAAGACTACCGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp CCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGCAAAGATCCACAGCTaGTCACTGTACACCGTGGCC +
Preference number: 5 (lower is better)
Translates to: PHVIQPGVAVIASKDPQLAKIHS*SLYTVA
Trigger: GGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGC...AAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GAGAGGGTGATGACAGGAGGGGGTCTGCTTCATCATCCGCTCCCTGTGGGACCTTATTTTGGCTCCGCTTaGCCCAGAGAATACAAACAT +
Preference number: 5 (lower is better)
Translates to: ERVMTGGGLLHHPLPVGPYFGSA*PREYKH
Trigger: ATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATA...AGGTCCCACAGGGAGCGGATGATGAAGCAGACCCCCTCCTGTCATCACCCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp GCAAAGATCCACAGCTTGTCACTGTACACCGTGGCCCCATGGGCTGACCTAGCGAACTGGAAGAGGTTGTaGGTTATTTTGGCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: AKIHSLSLYTVAPWADLANWKRL*VILAPL
Trigger: AAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTT...CGCTAGGTCAGCCCATGGGGCCACGGTGTACAGTGACAAGCTGTGGATCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp ATCTTCGGGCATGAAGGACCGGAACATGGCTTCAAAGTAGCTGGAGCGGGCGGCAACTGGAAGAGGTTGTaGGTTATTTTGGCTCCGCTT +
Preference number: 5 (lower is better)
Translates to: IFGHEGPEHGFKVAGAGGNWKRL*VILAPL
Trigger: AAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTT...GCCGCCCGCTCCAGCTACTTTGAAGCCATGTTCCGGTCCTTCATGCCCGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CAA 90 bp ACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGTTTCAGGCAGTGCTCCTaGAGTTGGCTCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TCHSTWRCRHSQQRSTACFRQCS*SWLSCS
Trigger: GCTGCAGCTGAGCCAACTCAAGGAGCACTGCCTGAA...ACAAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CAA 90 bp AGCTCTGCGCACTGCTTGTCTGAGATGTGGGAGGCCAGGGAGTCTATGATGTCCAAGCTCAGTGCCAGTTaGTACACATCCATGATGAGC +
Preference number: 5 (lower is better)
Translates to: SSAHCLSEMWEARESMMSKLSAS*YTSMMS
Trigger: GCTCATCATGGATGTGTACAAACTGGCACTGAGCTT...GGACATCATAGACTCCCTGGCCTCCCACATCTCAGACAAGCAGTGCGCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS TCA 90 bp TGCAGGCCTAACAGGCATCCTGACCCTCCATGTTCAGACCCCTACTaGAGTGACATAAGGAGTACCTCCATGTCTGTGCTCAACTGTCAC +
Preference number: 5 (lower is better)
Translates to: CRPNRHPDPPCSDPY*SDIRSTSMSVLNCH
Trigger: GTGACAGTTGAGCACAGACATGGAGGTACTCCTTATGTCACTTCAGTAGGGGTCTGAACATGGAGGGTCAGGATGCCTGTTAGGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS-3UTR CAA 90 bp GTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGACTTCTTGAAGCCAACCCGCTCAAACTGGAAGAGGTaGTTGGTTATTTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: VVPKSRPNTSRDFLKPTRSNWKR*LVILAP
Trigger: CGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGA...GCGGGTTGGCTTCAAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497716.5
ENST00000642151.1
CDS-3UTR CAA 90 bp TGTGGCTTTAATGGAGGCTTGTCTGTGACAGAATACTCAGCAAGGGACACGGGGAGGTGGAGGCAGGAGTaGACAGCATGGATAGAGACA +
Preference number: 5 (lower is better)
Translates to: CGFNGGLSVTEYSARDTGRWRQE*TAWIET
Trigger: TGTCTCTATCCATGCTGTCAACTCCTGCCTCCACCT...CCCCGTGTCCCTTGCTGAGTATTCTGTCACAGACAAGCCTCCATTAAAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415817.2
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp ACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCTTGTACATCTCGGGACTTCTaGAAGCCAACCCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TCHSTWRCRHSQQRSTACTSRDF*KPTRSS
Trigger: TGAGGAGCGGGTTGGCTTCAAGAAGTCCCGAGATGT...ACAAGCTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642151.1
CDS-3UTR CAA 90 bp CTCTCAGGACCTGCAGGCCCCTCTGGTCTTCTGCCATTATTTGAGATCTATGCAAGGTTGTTGGTTATTTaGGCTCCGCTTTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: LSGPAGPSGLLPLFEIYARLLVI*APLCPE
Trigger: CTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCT...TGCATAGATCTCAAATAATGGCAGAAGACCAGAGGGGCCTGCAGGTCCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS GCA 90 bp CTCATGCTACTCCAGGACCATCCACACTCCTGCTCTCAGCAGCAGTaGAGCATCTTACAGCACGGGGTCCATCAATTTCATTTAATACCT +
Preference number: 5 (lower is better)
Translates to: LMLLQDHPHSCSQQQ*SILQHGVHQFHLIP
Trigger: AGGTATTAAATGAAATTGATGGACCCCGTGCTGTAAGATGCTGCACTGCTGCTGAGAGCAGGAGTGTGGATGGTCCTGGAGTAGCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS-3UTR CAA 90 bp TGTCCACATGTCATTCAACCTGGCGTTGCCGTCATAGCCAGCAAAGATCCACAGCCGTCCACTGGCCAGTaGCAAACTTGTATTCAAAGA +
Preference number: 5 (lower is better)
Translates to: CPHVIQPGVAVIASKDPQPSTGQ*QTCIQR
Trigger: TCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGG...CTGTGGATCTTTGCTGGCTATGACGGCAACGCCAGGTTGAATGACATGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000642151.1
CDS TCA 90 bp AAGCTCATGCAAATTCCCATTACCAGAAAACCTCTGGCAACACCTTaGGGTCTTCCCTGCACACCTCTCCTACGCATACTTAGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: KLMQIPITRKPLATP*GLPCTPLLRILRLP
Trigger: TGGAAGCCTAAGTATGCGTAGGAGAGGTGTGCAGGGAAGACCTCAAGGTGTTGCCAGAGGTTTTCTGGTAATGGGAATTTGCATGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS GCA 90 bp TTTGTAAATTGCTTATTCCACTCACAGAATGTGACCAGGTCCTCATaGTACTCCAGGACCATCCACACTCCTGCTCTCAGCAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: FVNCLFHSQNVTRSS*YSRTIHTPALSSSA
Trigger: TGCACTGCTGCTGAGAGCAGGAGTGTGGATGGTCCTGGAGTAGCATGAGGACCTGGTCACATTCTGTGAGTGGAATAAGCAATTTACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS-3UTR CAA 90 bp GTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTTCGAAGGGCCCGAAGTaGAGCGTCAGGTACTCGACA +
Preference number: 5 (lower is better)
Translates to: VLSLNSNWKRLLVILAPLSKGPK*SVRYST
Trigger: TGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCGA...AAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414985.5
CDS-3UTR CAA 90 bp AGGATGGTTACCATGGCCACCAGGTGCAAGAGGCGTTCTTCATATTCAGAAGGAGTCTTCTGCCATTATTaGAGATCTATGCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: RMVTMATRCKRRSSYSEGVFCHY*RSMQAT
Trigger: CGTGGCCTGCATAGATCTCAAATAATGGCAGAAGAC...TCCTTCTGAATATGAAGAACGCCTCTTGCACCTGGTGGCCATGGTAACCATCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CAA 90 bp CACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGAACCGCAGGAGGTCATaGAGCATGGTCTTCCCATTG +
Preference number: 5 (lower is better)
Translates to: HVLSLNSNWKRLLVILAPNRRRS*SMVFPL
Trigger: CAATGGGAAGACCATGCTCAATGACCTCCTGCGGTT...CGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414985.5
CDS-3UTR CAA 90 bp CCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACGTCTTGTCCTTGAATTCAAATGGCCAGTTGCAAACTaGTATTCAAAGAGGTCGTTT +
Preference number: 5 (lower is better)
Translates to: PEQVFSWDACPRLVLEFKWPVAN*YSKRSF
Trigger: AAACGACCTCTTTGAATACAAGTTTGCAACTGGCCA...TTTGAATTCAAGGACAAGACGTGGACACGCATCCCAACTGAACACCTGCTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp ACCTCAGGGCCCTTCACTCCAAAATTCACCTCAAGTCAGGTGAGACCCATACATTCAAACTGGAAGAGGTaGTTGGTTATTTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: TSGPFTPKFTSSQVRPIHSNWKR*LVILAP
Trigger: CGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGA...ATGTATGGGTCTCACCTGACTTGAGGTGAATTTTGGAGTGAAGGGCCCTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642151.1
ENST00000646124.2
CDS-3UTR CAA 90 bp TTACCATGGCCACCAGGTGCAAGAGGCGTTCTTCATATTCAGAAGGATTCGAGGCAGAGTACTCACGTCTaGTCCTTGAATTCAAACTGG +
Preference number: 5 (lower is better)
Translates to: LPWPPGARGVLHIQKDSRQSTHV*SLNSNW
Trigger: CCAGTTTGAATTCAAGGACAAGACGTGAGTACTCTG...CCTCGAATCCTTCTGAATATGAAGAACGCCTCTTGCACCTGGTGGCCATGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CAA 90 bp CACAAGGATGGTTACCATGGCCACCAGGTGCAAGAGGCGTTCTTCATATTCAGATATTTTGGCTCCGCTTaGCCCAGAGAATACAAACAT +
Preference number: 5 (lower is better)
Translates to: HKDGYHGHQVQEAFFIFRYFGSA*PREYKH
Trigger: ATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATA...TCTGAATATGAAGAACGCCTCTTGCACCTGGTGGCCATGGTAACCATCCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS-3UTR CAA 90 bp AATTTTCCACTCCGTCCACTGGCCAGTTGCAAACTTGTATTCAAAGAGGTCGTTAGGTTGTTGGTTATTTaGGCTCCGCTTTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: NFPLRPLASCKLVFKEVVRLLVI*APLCPE
Trigger: CTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCT...AACGACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp CTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTTGCCCAGATCAAACTGGAAGAGGTaGTTGGTTATTTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: LEFKLEEVVGYFGSALPRSNWKR*LVILAP
Trigger: CGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGA...TCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GCGTGTCCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTATGCGTGTCCACGTCTaGTCCTTGAATTCAAACTGG +
Preference number: 5 (lower is better)
Translates to: ACPRLVLEFKLEEVVGYFMRVHV*SLNSNW
Trigger: CCAGTTTGAATTCAAGGACAAGACGTGGACACGCAT...AAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGGACACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS-3UTR CAA 90 bp GTCTTGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTTATTTTGGCTCCGCTTTCAAACTGGAAGAGGTaGTTGGTTATTTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: VLSLNSNWKRLLVILAPLSNWKR*LVILAP
Trigger: CGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGA...AAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414985.5
ENST00000642151.1
CDS CCA 72 bp AGCAGCTATGGTCGAAGTCCACGCTCGGGGCTACCTTaGACCGCGCGCCGCCTGCCAGGGCCGCAGCCCCGA +
Preference number: 6 (lower is better)
Translates to: SSYGRSPRSGLP*TARRLPGPQPR
Trigger: TCGGGGCTGCGGCCCTGGCAGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCGTGGACTTCGACCATAGCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000645935.1
ENST00000646124.2
CDS CAA 90 bp AGCCATCCCGGGTCCACGCCGGATCGGCCGCGCTGTAAGCCCAACTaGCGGCCACCGCCCCGGGCCGGCTGGAGAAACCACATTTCCCGG +
Preference number: 6 (lower is better)
Translates to: SHPGSTPDRPRCKPN*RPPPRAGWRNHISR
Trigger: CCGGGAAATGTGGTTTCTCCAGCCGGCCCGGGGCGGTGGCCGCAAGTTGGGCTTACAGCGCGGCCGATCCGGCGTGGACCCGGGATGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414985.5
CDS CAA 90 bp ACACTGTCCGAGCAGCTATGGTCGAAGTCCACGCTCGGGGCTACCTaGGACCGCGCGCCGCCTGCCAGGGCCGCAGCCCCGATCTGCCCC +
Preference number: 6 (lower is better)
Translates to: TLSEQLWSKSTLGAT*DRAPPARAAAPICP
Trigger: GGGGCAGATCGGGGCTGCGGCCCTGGCAGGCGGCGCGCGGTCCAAGGTAGCCCCGAGCGTGGACTTCGACCATAGCTGCTCGGACAGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000645935.1
ENST00000646124.2
CDS GCA 72 bp ACGAACTCGTCGCAGGGCGGGAGGCGCCGCCAGCGATaGACTGTTTCGAAGGGCCCGAAGTTGAGCGTCAGG +
Preference number: 6 (lower is better)
Translates to: TNSSQGGRRRQR*TVSKGPKLSVR
Trigger: CCTGACGCTCAACTTCGGGCCCTTCGAAACAGTGCATCGCTGGCGGCGCCTCCCGCCCTGCGACGAGTTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000644435.1
ENST00000645935.1
ENST00000646124.2
CDS CCA 72 bp GTGCCAGGACCCCTTGGTGGGGACCTGGGAGTTCACTaGGGAGTGAGGATGCAGCGAGTCCTCGGGCGGCAT +
Preference number: 6 (lower is better)
Translates to: VPGPLGGDLGVH*GVRMQRVLGRH
Trigger: ATGCCGCCCGAGGACTCGCTGCATCCTCACTCCCCAGTGAACTCCCAGGTCCCCACCAAGGGGTCCTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS TCA 72 bp GGCCTTCACTGGGAGGTCCCCCTGCATCCCTTACGGTaGCTAGCCCAGGGTCCAGAGGGAGGGCCTAGACAC +
Preference number: 6 (lower is better)
Translates to: GLHWEVPLHPLR*LAQGPEGGPRH
Trigger: GTGTCTAGGCCCTCCCTCTGGACCCTGGGCTAGTCACCGTAAGGGATGCAGGGGGACCTCCCAGTGAAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643578.1
CDS GCA 72 bp ATCAGCCTCGAGGTAGAGGTGGACAGCCCAGAAGGGTaGCGCCCTGTGTGCCCAGCTTGGCAGCTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: ISLEVEVDSPEG*RPVCPAWQLQV
Trigger: CACCTGCAGCTGCCAAGCTGGGCACACAGGGCGGCACCCTTCTGGGCTGTCCACCTCTACCTCGAGGCTGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480895.1
ENST00000493460.2
CDS CCA 72 bp GACAGCCCAGAAGGGTGCCGCCCTGTGTGCCCAGCTTaGCAGCTGCAGGTGCGGGGTGGTTACTTGATCTCC +
Preference number: 6 (lower is better)
Translates to: DSPEGCRPVCPA*QLQVRGGYLIS
Trigger: GGAGATCAAGTAACCACCCCGCACCTGCAGCTGCCAAGCTGGGCACACAGGGCGGCACCCTTCTGGGCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS TCA 72 bp CTGCAGGTGCGGGGTGGTTACTTGATCTCCTCAGCCTaGCAGGGCGGCTCTGGATGTGGCATCCCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: LQVRGGYLISSA*QGGSGCGIPEA
Trigger: GGCCTCAGGGATGCCACATCCAGAGCCGCCCTGTCAGGCTGAGGAGATCAAGTAACCACCCCGCACCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS GCA 72 bp ATCCCAGCCTGTACCTCCGAGGCAGGCTGGGTGGGCTaGTTGGCTGAGGTGGTGCCAAAGTCCAGGCCAAAC +
Preference number: 6 (lower is better)
Translates to: IPACTSEAGWVG*LAEVVPKSRPN
Trigger: GTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGGTACAGGCTGGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461510.1
CDS CCA 72 bp TCCGCGCCCGCTCCCTCCAGGTATGCCTTCATGTCCTaGATCAGAGATGTGCCTGGGGGTAGGAGGGTCCCT +
Preference number: 6 (lower is better)
Translates to: SAPAPSRYAFMS*IRDVPGGRRVP
Trigger: AGGGACCCTCCTACCCCCAGGCACATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS CAA 90 bp GGCGGGAGGCGCCGCCAGCGATGCACTGTTTCGAAGGGCCCGAAGTaGAGCGTCAGGTACTCGACACTGTCCGAGCAGCTATGGTCGAAG +
Preference number: 6 (lower is better)
Translates to: GGRRRQRCTVSKGPK*SVRYSTLSEQLWSK
Trigger: CTTCGACCATAGCTGCTCGGACAGTGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCGAAACAGTGCATCGCTGGCGGCGCCTCCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000645935.1
ENST00000646124.2
CDS CAA 90 bp ATGAGGATCCCAGCCTGTACCTCCGAGGCAGGCTGGGTGGGCTGCTaGGCTGAGGTGGTGCCAAAGTCCAGGCCAAACACATCTCGGGAC +
Preference number: 6 (lower is better)
Translates to: MRIPACTSEAGWVGC*AEVVPKSRPNTSRD
Trigger: GTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGGTACAGGCTGGGATCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461510.1
CDS TCA 72 bp GGCCGCAAACAAGTAGCTGGGGCCTGGTTAAGGAGCTaGCTAAAGGAAGCTGGTCCGCCCGCACCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: GRKQVAGAWLRS*LKEAGPPAPSQ
Trigger: CTGGGAGGGTGCGGGCGGACCAGCTTCCTTTAGTCAGCTCCTTAACCAGGCCCCAGCTACTTGTTTGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS TCA 72 bp GTCAGCTGCCTCCAGGATCTGCAATGGCAGGGACCTTaGGGCGCTGCCCCTTTCACCCACTCAGTGGGAGCT +
Preference number: 6 (lower is better)
Translates to: VSCLQDLQWQGP*GAAPFTHSVGA
Trigger: AGCTCCCACTGAGTGGGTGAAAGGGGCAGCGCCTCAAGGTCCCTGCCATTGCAGATCCTGGAGGCAGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS CCA 72 bp CAGCCTGTACCTCCGAGGCAGGCTGGGTGGGCTGCTTaGCTGAGGTGGTGCCAAAGTCCAGGCCAAACACAT +
Preference number: 6 (lower is better)
Translates to: QPVPPRQAGWAA*LRWCQSPGQTH
Trigger: ATGTGTTTGGCCTGGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGGTACAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461510.1
CDS CCA 72 bp AGGTCACCAGGACACAGCCCACTGTGGCAAGCCCCATaGGTCGGGGGCTTCTGCCTTCATCTGTTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: RSPGHSPLWQAP*VGGFCLHLFPP
Trigger: GGGAGGAAACAGATGAAGGCAGAAGCCCCCGACCCATGGGGCTTGCCACAGTGGGCTGTGTCCTGGTGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS CCA 72 bp GTAGGAGGGTCCCTGAGCAGGTACAGCCTGGGATTCTaGCCTTGGGGCCCCACGGCACTACCTTCCTGCATA +
Preference number: 6 (lower is better)
Translates to: VGGSLSRYSLGF*PWGPTALPSCI
Trigger: TATGCAGGAAGGTAGTGCCGTGGGGCCCCAAGGCCAGAATCCCAGGCTGTACCTGCTCAGGGACCCTCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS CCA 72 bp AGCTGGGGCCTGGTTAAGGAGCTGACTAAAGGAAGCTaGTCCGCCCGCACCCTCCCAGGGAAGGACAGGGAA +
Preference number: 6 (lower is better)
Translates to: SWGLVKELTKGS*SARTLPGKDRE
Trigger: TTCCCTGTCCTTCCCTGGGAGGGTGCGGGCGGACCAGCTTCCTTTAGTCAGCTCCTTAACCAGGCCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS CAA 72 bp GGAACCCACTGGTTCCTCCTGGCTGCAAACCCCTCCTaGCCAGCTGCCAACTGCTTCAGAGAGCACCAGGCC +
Preference number: 6 (lower is better)
Translates to: GTHWFLLAANPS*PAANCFREHQA
Trigger: GGCCTGGTGCTCTCTGAAGCAGTTGGCAGCTGGCAAGGAGGGGTTTGCAGCCAGGAGGAACCAGTGGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS CAA 90 bp CCTGCGTTTTGTCAGCTGCCTCCAGGATCTGCAATGGCAGGGACCTaGAGGCGCTGCCCCTTTCACCCACTCAGTGGGAGCTGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: PAFCQLPPGSAMAGT*RRCPFHPLSGSCSH
Trigger: ATGGCTGCAGCTCCCACTGAGTGGGTGAAAGGGGCAGCGCCTCAAGGTCCCTGCCATTGCAGATCCTGGAGGCAGCTGACAAAACGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS TCA 72 bp GTCTCATCTTCCACCCAGCTTGCTGTACCCCCTCGCTaGCCTCATGATCAAGCCCCCTCCAGGCCCACTGCA +
Preference number: 6 (lower is better)
Translates to: VSSSTQLAVPPR*PHDQAPSRPTA
Trigger: TGCAGTGGGCCTGGAGGGGGCTTGATCATGAGGTCAGCGAGGGGGTACAGCAAGCTGGGTGGAAGATGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS TCA 72 bp GGGAGTGAGGATGCAGCGAGTCCTCGGGCGGCATGTTaGCCTCGCCGTAGTAGATGTAGCGCAGCATGGACT +
Preference number: 6 (lower is better)
Translates to: GSEDAASPRAAC*PRRSRCSAAWT
Trigger: AGTCCATGCTGCGCTACATCTACTACGGCGAGGTCAACATGCCGCCCGAGGACTCGCTGCATCCTCACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS CCA 72 bp TTGAGCGTCAGGTACTCGACACTGTCCGAGCAGCTATaGTCGAAGTCCACGCTCGGGGCTACCTTGGACCGC +
Preference number: 6 (lower is better)
Translates to: LSVRYSTLSEQL*SKSTLGATLDR
Trigger: GCGGTCCAAGGTAGCCCCGAGCGTGGACTTCGACCATAGCTGCTCGGACAGTGTCGAGTACCTGACGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000645935.1
ENST00000646124.2
CDS CCA 72 bp TTAATGAGGATCCCAGCCTGTACCTCCGAGGCAGGCTaGGTGGGCTGCTTGGCTGAGGTGGTGCCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: LMRIPACTSEAG*VGCLAEVVPKS
Trigger: GGACTTTGGCACCACCTCAGCCAAGCAGCCCACCCAGCCTGCCTCGGAGGTACAGGCTGGGATCCTCATTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461510.1
CDS CCA 72 bp TCAGGAAATCCCAGGTCACCAGGACACAGCCCACTGTaGCAAGCCCCATGGGTCGGGGGCTTCTGCCTTCAT +
Preference number: 6 (lower is better)
Translates to: SGNPRSPGHSPL*QAPWVGGFCLH
Trigger: ATGAAGGCAGAAGCCCCCGACCCATGGGGCTTGCCACAGTGGGCTGTGTCCTGGTGACCTGGGATTTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS CCA 72 bp GGCAGTTGTGAGGGTCAGGAACCCACTGGTTCCTCCTaGCTGCAAACCCCTCCTTGCCAGCTGCCAACTGCT +
Preference number: 6 (lower is better)
Translates to: GSCEGQEPTGSS*LQTPPCQLPTA
Trigger: AGCAGTTGGCAGCTGGCAAGGAGGGGTTTGCAGCCAGGAGGAACCAGTGGGTTCCTGACCCTCACAACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS CAA 72 bp CGCCGCCAGCGATGCACTGTTTCGAAGGGCCCGAAGTaGAGCGTCAGGTACTCGACACTGTCCGAGCAGCTA +
Preference number: 6 (lower is better)
Translates to: RRQRCTVSKGPK*SVRYSTLSEQL
Trigger: TAGCTGCTCGGACAGTGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCGAAACAGTGCATCGCTGGCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000644435.1
ENST00000645935.1
ENST00000646124.2
CDS TCA 72 bp GCCGCCAGCGATGCACTGTTTCGAAGGGCCCGAAGTTaGGCGTCAGGTACTCGACACTGTCCGAGCAGCTAT +
Preference number: 6 (lower is better)
Translates to: AASDALFRRARS*ASGTRHCPSSY
Trigger: ATAGCTGCTCGGACAGTGTCGAGTACCTGACGCTCAACTTCGGGCCCTTCGAAACAGTGCATCGCTGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000644435.1
ENST00000645935.1
ENST00000646124.2
CDS TCA 72 bp CAGAGACTGATCACCGTGACCCTGGGCCATCAGACCTaGCATCCTAGCCCGAAAGAGGTGCCCCATGTCCAC +
Preference number: 6 (lower is better)
Translates to: QRLITVTLGHQT*HPSPKEVPHVH
Trigger: GTGGACATGGGGCACCTCTTTCGGGCTAGGATGTCAGGTCTGATGGCCCAGGGTCACGGTGATCAGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS TCA 72 bp CTCAGCCTGACAGGGCGGCTCTGGATGTGGCATCCCTaGGGCCGTGGTTATCTCCTCCTGGAAGCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: LSLTGRLWMWHP*GRGYLLLEASF
Trigger: GAAAGAAGCTTCCAGGAGGAGATAACCACGGCCTCAGGGATGCCACATCCAGAGCCGCCCTGTCAGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS GCA 72 bp GATGTCACAGAATTCCGCGCCCGCTCCCTCCAGGTATaGCTTCATGTCCTGGATCAGAGATGTGCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: DVTEFRARSLQV*LHVLDQRCAWG
Trigger: CCCCCAGGCACATCTCTGATCCAGGACATGAAGGCATACCTGGAGGGAGCGGGCGCGGAATTCTGTGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS GCA 72 bp GTTGTGAGGGTCAGGAACCCACTGGTTCCTCCTGGCTaGAAACCCCTCCTTGCCAGCTGCCAACTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: VVRVRNPLVPPG*KPLLASCQLLQ
Trigger: CTGAAGCAGTTGGCAGCTGGCAAGGAGGGGTTTGCAGCCAGGAGGAACCAGTGGGTTCCTGACCCTCACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS GCA 72 bp GAGAGAGACTCTGCTAGCAACTGGGACCCAGCACTGTaGCACTGTGTTCTAGGAGGAAAGGCAGGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: ERDSASNWDPAL*HCVLGGKAGPW
Trigger: CCAGGGCCCTGCCTTTCCTCCTAGAACACAGTGGCACAGTGCTGGGTCCCAGTTGCTAGCAGAGTCTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS GCA 72 bp TCCAGTGCCTGCGTTTTGTCAGCTGCCTCCAGGATCTaGAATGGCAGGGACCTTGAGGCGCTGCCCCTTTCA +
Preference number: 6 (lower is better)
Translates to: SSACVLSAASRI*NGRDLEALPLS
Trigger: TGAAAGGGGCAGCGCCTCAAGGTCCCTGCCATTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS CCA 72 bp TGGGCCACCTCCTCCCAGCAGGTGAGCTCTCGGTCCTaGAGGCCAATTGTCCACATGTCATTCAACCGTCCT +
Preference number: 6 (lower is better)
Translates to: WATSSQQVSSRS*RPIVHMSFNRP
Trigger: AGGACGGTTGAATGACATGTGGACAATTGGCCTCCAGGACCGAGAGCTCACCTGCTGGGAGGAGGTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644435.1
CDS CAA 72 bp TGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTaGTCAGCTGCCTCCAGGATCTGCAATGGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: CRQCRFMSSACV*SAASRICNGRD
Trigger: GTCCCTGCCATTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS CAA 90 bp CGGCACAGCTGCTCCAGGCGGCACAACTGGAAGCTCAGTGCCAGTTaGTACACATCCATGATGAGCAGCACATCCTCCACATGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: RHSCSRRHNWKLSAS*YTSMMSSTSSTWPA
Trigger: CGCAGGCCATGTGGAGGATGTGCTGCTCATCATGGATGTGTACAAACTGGCACTGAGCTTCCAGTTGTGCCGCCTGGAGCAGCTGTGCCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491432.5
ENST00000495142.6
ENST00000646506.1
CDS CAA 90 bp ACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTGCGTTTaGTCAGCTGCCTCCAGGATCTGCAATGGCAGGGACCTTGAGGCG +
Preference number: 6 (lower is better)
Translates to: TMMCRQCRFMSSACV*SAASRICNGRDLEA
Trigger: CGCCTCAAGGTCCCTGCCATTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS CAA 90 bp CCCAGGCAGTCCTGCTCTCTGGGGAGTAAAGTTGTGCAGAGACCATaGCAGGTCACTGTGTTCACGCTGCCCAGTCAGAGCATCCCCACA +
Preference number: 6 (lower is better)
Translates to: PRQSCSLGSKVVQRP*QVTVFTLPSQSIPT
Trigger: TGTGGGGATGCTCTGACTGGGCAGCGTGAACACAGTGACCTGCAATGGTCTCTGCACAACTTTACTCCCCAGAGAGCAGGACTGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643578.1
CDS TCA 72 bp AGTTGGGATGCGTGTCCACCTGGGGGTACACAACAGTaGATCAATGCTGGGACAGGGGCTCCTGCTCACCCT +
Preference number: 6 (lower is better)
Translates to: SWDACPPGGTQQ*INAGTGAPAHP
Trigger: AGGGTGAGCAGGAGCCCCTGTCCCAGCATTGATTCACTGTTGTGTACCCCCAGGTGGACACGCATCCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495142.6
ENST00000643578.1
CDS GCA 72 bp AACTCCTTCATCATGATCACCTTGAGTTGGCTCAGCTaGAGCCGGGCGGCACTCTCGCACACAACCAGCACG +
Preference number: 6 (lower is better)
Translates to: NSFIMITLSWLS*SRAALSHTTST
Trigger: CGTGCTGGTTGTGTGCGAGAGTGCCGCCCGGCTGCAGCTGAGCCAACTCAAGGTGATCATGATGAAGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415817.2
ENST00000491432.5
CDS GCA 72 bp CGCCCAGGCAGTCCTGCTCTCTGGGGAGTAAAGTTGTaGAGAGACCATTGCAGGTCACTGTGTTCACGCTGC +
Preference number: 6 (lower is better)
Translates to: RPGSPALWGVKL*RDHCRSLCSRC
Trigger: GCAGCGTGAACACAGTGACCTGCAATGGTCTCTGCACAACTTTACTCCCCAGAGAGCAGGACTGCCTGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643578.1
CDS CCA 72 bp GACAGGGCGGCTCTGGATGTGGCATCCCTGAGGCCGTaGTTATCTCCTCCTGGAAGCTTCTTTCTAGCTTCC +
Preference number: 6 (lower is better)
Translates to: DRAALDVASLRP*LSPPGSFFLAS
Trigger: GGAAGCTAGAAAGAAGCTTCCAGGAGGAGATAACCACGGCCTCAGGGATGCCACATCCAGAGCCGCCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS CCA 72 bp CCCGGAGCAGGTGTTCAGTTGGGATGCGTGTCCACCTaGGGGTACACAACAGTGAATCAATGCTGGGACAGG +
Preference number: 6 (lower is better)
Translates to: PGAGVQLGCVST*GYTTVNQCWDR
Trigger: CCTGTCCCAGCATTGATTCACTGTTGTGTACCCCCAGGTGGACACGCATCCCAACTGAACACCTGCTCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495142.6
ENST00000643578.1
CDS CAA 72 bp ACAGGAGAACTGTACATCTCCCCGCTGCGGATGTTGTaGTCCACCGTGCCCCCGAAGATGTACATGGCGTCC +
Preference number: 6 (lower is better)
Translates to: TGELYISPLRML*STVPPKMYMAS
Trigger: GGACGCCATGTACATCTTCGGGGGCACGGTGGACAACAACATCCGCAGCGGGGAGATGTACAGTTCTCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492480.1
CDS GCA 72 bp CCCCACGGCACTACCTTCCTGCATATCTGCCCATGTTaGTGCCCTGAACAAAACTTCACCCAGGCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: PHGTTFLHICPC*CPEQNFTQAEG
Trigger: GCCTTCTGCCTGGGTGAAGTTTTGTTCAGGGCAGCAACATGGGCAGATATGCAGGAAGGTAGTGCCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463909.1
ENST00000495142.6
CDS GCA 72 bp ATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTGCCTaGGTTTTGTCAGCTGCCTCCAGGATCTGCAATGGC +
Preference number: 6 (lower is better)
Translates to: MMCRQCRFMSSA*VLSAASRICNG
Trigger: GCCATTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS GCA 72 bp TTGTGCAGAGACCATTGCAGGTCACTGTGTTCACGCTaGCCAGTCAGAGCATCCCCACAGCTGAGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: LCRDHCRSLCSR*PVRASPQLSPH
Trigger: ATGGGGACTCAGCTGTGGGGATGCTCTGACTGGGCAGCGTGAACACAGTGACCTGCAATGGTCTCTGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643578.1
CDS CCA 72 bp CAACTGTCACACAAAGCAATGACCCACCCCGTCCTCTaGGCAGTTGTGAGGGTCAGGAACCCACTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: QLSHKAMTHPVL*AVVRVRNPLVP
Trigger: AGGAACCAGTGGGTTCCTGACCCTCACAACTGCCCAGAGGACGGGGTGGGTCATTGCTTTGTGTGACAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS CCA 72 bp AACCCTGCTCCACCCCCACCCAGGCGGACCTTTCCGTaGGTATTTGATCTTGTCGGTGTAGAGGAACTGCAT +
Preference number: 6 (lower is better)
Translates to: NPAPPPPRRTFP*VFDLVGVEELH
Trigger: ATGCAGTTCCTCTACACCGACAAGATCAAATACCCACGGAAAGGTCCGCCTGGGTGGGGGTGGAGCAGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000492480.1
ENST00000495142.6
ENST00000646506.1
CDS CAA 90 bp GCATTTAGGGTAACAGGAGAACTGTACATCTCCCCGCTGCGGATGTaGTTGTCCACCGTGCCCCCGAAGATGTACATGGCGTCCGAGATG +
Preference number: 6 (lower is better)
Translates to: AFRVTGELYISPLRM*LSTVPPKMYMASEM
Trigger: CATCTCGGACGCCATGTACATCTTCGGGGGCACGGTGGACAACAACATCCGCAGCGGGGAGATGTACAGTTCTCCTGTTACCCTAAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492480.1
CDS GCA 72 bp CACAATGATGTGCAGGCAGTGCCGCTTCATGTCCAGTaGCTGCGTTTTGTCAGCTGCCTCCAGGATCTGCAA +
Preference number: 6 (lower is better)
Translates to: HNDVQAVPLHVQ*LRFVSCLQDLQ
Trigger: TTGCAGATCCTGGAGGCAGCTGACAAAACGCAGGCACTGGACATGAAGCGGCACTGCCTGCACATCATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498649.1
CDS GCA 72 bp CCTGCTCTCTGGGGAGTAAAGTTGTGCAGAGACCATTaGAGGTCACTGTGTTCACGCTGCCCAGTCAGAGCA +
Preference number: 6 (lower is better)
Translates to: PALWGVKLCRDH*RSLCSRCPVRA
Trigger: TGCTCTGACTGGGCAGCGTGAACACAGTGACCTGCAATGGTCTCTGCACAACTTTACTCCCCAGAGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643578.1
CDS CCA 72 bp AGAAGCCGTAGTAGTAGGGGGCCGCAAACAAGTAGCTaGGGCCTGGTTAAGGAGCTGACTAAAGGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: RSRSSRGPQTSS*GLVKELTKGSW
Trigger: CCAGCTTCCTTTAGTCAGCTCCTTAACCAGGCCCCAGCTACTTGTTTGCGGCCCCCTACTACTACGGCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS CAA 90 bp TTTAGGGTAACAGGAGAACTGTACATCTCCCCGCTGCGGATGTTGTaGTCCACCGTGCCCCCGAAGATGTACATGGCGTCCGAGATGACA +
Preference number: 6 (lower is better)
Translates to: FRVTGELYISPLRML*STVPPKMYMASEMT
Trigger: TGTCATCTCGGACGCCATGTACATCTTCGGGGGCACGGTGGACAACAACATCCGCAGCGGGGAGATGTACAGTTCTCCTGTTACCCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492480.1
CDS CCA 72 bp CTAGCTTCCCATGATGAGAGAGACTCTGCTAGCAACTaGGACCCAGCACTGTGCCACTGTGTTCTAGGAGGA +
Preference number: 6 (lower is better)
Translates to: LASHDERDSASN*DPALCHCVLGG
Trigger: TCCTCCTAGAACACAGTGGCACAGTGCTGGGTCCCAGTTGCTAGCAGAGTCTCTCTCATCATGGGAAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS TCA 72 bp AACAGGCATCCTGACCCTCCATGTTCAGACCCCTACTaGAGTGACATAAGGAGTACCTCCATGTCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: NRHPDPPCSDPY*SDIRSTSMSVL
Trigger: GAGCACAGACATGGAGGTACTCCTTATGTCACTTCAGTAGGGGTCTGAACATGGAGGGTCAGGATGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463909.1
CDS CAA 72 bp TCCTCCCTCCACCCCACTGGCCAGAGTACTCACGTCTaGTCCTTGAATTCAAACTGGAAGAGGTTGTTGGTT +
Preference number: 6 (lower is better)
Translates to: SSLHPTGQSTHV*SLNSNWKRLLV
Trigger: AACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGAGTACTCTGGCCAGTGGGGTGGAGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS CAA 72 bp CAGGAGCAGTCTTTCACATCGAACCGCAGGAGGTCATaGAGCATGGTCTTCCCATTGTCTCCACCAAATACA +
Preference number: 6 (lower is better)
Translates to: QEQSFTSNRRRS*SMVFPLSPPNT
Trigger: TGTATTTGGTGGAGACAATGGGAAGACCATGCTCAATGACCTCCTGCGGTTCGATGTGAAAGACTGCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000644435.1
ENST00000646124.2
CDS CAA 72 bp GCAAATTCCCATTACCAGAAAACCTCTGGCAACACCTaGAGGTCTTCCCTGCACACCTCTCCTACGCATACT +
Preference number: 6 (lower is better)
Translates to: ANSHYQKTSGNT*RSSLHTSPTHT
Trigger: AGTATGCGTAGGAGAGGTGTGCAGGGAAGACCTCAAGGTGTTGCCAGAGGTTTTCTGGTAATGGGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS TCA 72 bp AGGAGCAGTCTTTCACATCGAACCGCAGGAGGTCATTaGGCATGGTCTTCCCATTGTCTCCACCAAATACAT +
Preference number: 6 (lower is better)
Translates to: RSSLSHRTAGGH*AWSSHCLHQIH
Trigger: ATGTATTTGGTGGAGACAATGGGAAGACCATGCTCAATGACCTCCTGCGGTTCGATGTGAAAGACTGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414985.5
ENST00000443265.5
ENST00000493460.2
ENST00000644435.1
ENST00000646124.2
CDS TCA 72 bp CAAATTCCCATTACCAGAAAACCTCTGGCAACACCTTaGGGTCTTCCCTGCACACCTCTCCTACGCATACTT +
Preference number: 6 (lower is better)
Translates to: QIPITRKPLATP*GLPCTPLLRIL
Trigger: AAGTATGCGTAGGAGAGGTGTGCAGGGAAGACCTCAAGGTGTTGCCAGAGGTTTTCTGGTAATGGGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493460.2
CDS CAA 90 bp GGCCAGAGTACTCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTaGTTGGTTATTTTGGCTCCGCTTTGCCCAGAGAATACAAACATC +
Preference number: 6 (lower is better)
Translates to: GQSTHVLSLNSNWKR*LVILAPLCPENTNI
Trigger: GATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGAGTACTCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5
CDS CCA 72 bp TCATTCAACCGTCCTTCAATTTTCCACTCCGTCCACTaGCCAGTTGCAAACTTGTATTCAAAGAGGTCGTTT +
Preference number: 6 (lower is better)
Translates to: SFNRPSIFHSVH*PVANLYSKRSF
Trigger: AAACGACCTCTTTGAATACAAGTTTGCAACTGGCCAGTGGACGGAGTGGAAAATTGAAGGACGGTTGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644435.1
CDS CAA 72 bp ACTCACGTCTTGTCCTTGAATTCAAACTGGAAGAGGTaGTTGGTTATTTTGGCTCCGCTTTGCCCAGAGAAT +
Preference number: 6 (lower is better)
Translates to: THVLSLNSNWKR*LVILAPLCPEN
Trigger: ATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGTTTGAATTCAAGGACAAGACGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497716.5