Pregenerated sensors for LYZL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000120563Ensembl transcript IDs: ENST00000494304.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTGATTGGCTTTCATACTTCTAGTCTTGATTTGACTTCTAAAGTAGCCAAGCAGGGGCTTTATTTTGCATaGATGCTTTCTCAAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: VIGFHTSSLDLTSKVAKQGLYFA*MLSQGK Trigger: CTTGCCTTGAGAAAGCATTCATGCAAAATAAAGCCC...CTGCTTGGCTACTTTAGAAGTCAAATCAAGACTAGAAGTATGAAAGCCAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494304.1 |
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| CDS-3UTR GCA 90 bp | GCTGAGTTTAACTTTTTCCCTTGTAGTTTGGAATTCTTAGCAGCAGGGACCAACATCTGGGCTTTATTTTaGATGAATGCTTTCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AEFNFFPCSLEFLAAGTNIWALF*MNAFSR Trigger: CCTTGAGAAAGCATTCATGCAAAATAAAGCCCAGAT...GTTGGTCCCTGCTGCTAAGAATTCCAAACTACAAGGGAAAAAGTTAAACTCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494304.1 |
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| CDS-3UTR TCA 90 bp | GAAATTGTGATTGGCTTTCATACTTCTAGTCTTGATTTGACTTCTAAAGTAGCCCAACCAAATGGTGAATaGTGGATCCTAATTGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EIVIGFHTSSLDLTSKVAQPNGE*WILIVG Trigger: CCCAACAATTAGGATCCATCATTCACCATTTGGTTG...GGCTACTTTAGAAGTCAAATCAAGACTAGAAGTATGAAAGCCAATCACAATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494304.1 |
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| CDS-3UTR GCA 90 bp | GAAATTGTGATTGGCTTTCATACTTCTAGTCTTGATTTGACTTCTAAAGTAGCCTCTCATAATATGCCATaGAGATCCAGTTTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EIVIGFHTSSLDLTSKVASHNMP*RSSFQG Trigger: GCCTTGGAAACTGGATCTGCATGGCATATTATGAGA...GGCTACTTTAGAAGTCAAATCAAGACTAGAAGTATGAAAGCCAATCACAATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494304.1 |
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