RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYSMD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000183060

Ensembl transcript IDs: ENST00000332728.8, ENST00000344791.6, ENST00000378904.4, ENST00000409796.5, ENST00000450512.1, ENST00000479791.1, ENST00000484050.1, ENST00000493256.1, ENST00000496108.5, ENST00000545021.2, ENST00000604213.1, ENST00000684762.1

Found 588 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCAAGAGCCAGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTaGAGGTCCCTCGACAGAGGCCATAAATCTTTCCCTCCGAGCACG +
Preference number: 1 (lower is better)
Translates to: QQEPGKPRRCHWLSR*RSLDRGHKSFPPST
Trigger: CGTGCTCGGAGGGAAAGATTTATGGCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCTGGCTCTTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR GCA 90 bp CCACAGGAAGTGAGGATACAGCAAGAGCCAGGCAAGCCGCGCAGATaGCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCCATAAA +
Preference number: 1 (lower is better)
Translates to: PQEVRIQQEPGKPRR*HWLSRCRSLDRGHK
Trigger: TTTATGGCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCTGGCTCTTGCTGTATCCTCACTTCCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR GCA 90 bp TGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTaGCAGCTTAGACTGGGTAAGGCCATGCCCAGGGCCAGTGCAATT +
Preference number: 1 (lower is better)
Translates to: CTSLDRGRGRCCFRS*QLRLGKAMPRASAI
Trigger: AATTGCACTGGCCCTGGGCATGGCCTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR CCA 90 bp GAAGTGAGGATACAGCAAGAGCCAGGCAAGCCGCGCAGATGCCACTaGCTCTCACGCTGCAGGTCCCTCGACAGAGGCCATAAATCTTTC +
Preference number: 1 (lower is better)
Translates to: EVRIQQEPGKPRRCH*LSRCRSLDRGHKSF
Trigger: GAAAGATTTATGGCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCTGGCTCTTGCTGTATCCTCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR CCA 90 bp ATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTaGGTAAGGCCATGCCCAGGGCCAGTGCAATTGGGAATACTGCAG +
Preference number: 1 (lower is better)
Translates to: IGAEVAAVLDPASLD*VRPCPGPVQLGILQ
Trigger: CTGCAGTATTCCCAATTGCACTGGCCCTGGGCATGGCCTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR GCA 90 bp GAACTGGCCAGTCCACTAAATGTCACAGGGAAATGGCTCTCTTGCTaGACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCC +
Preference number: 1 (lower is better)
Translates to: ELASPLNVTGKWLSC*TSLDRGRGRCCFRS
Trigger: GGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAGTGGACTGGCCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR GCA 90 bp TATGAACTGGCCAGTCCACTAAATGTCACAGGGAAATGGCTCTCTTaGTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGA +
Preference number: 1 (lower is better)
Translates to: YELASPLNVTGKWLS*CTSLDRGRGRCCFR
Trigger: TCTAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAGTGGACTGGCCAGTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR CCA 90 bp TGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGTACACAGGTaGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCATT +
Preference number: 1 (lower is better)
Translates to: WPLHREWKSLLCVHR*SQSKLHLLSPIMSI
Trigger: AATGGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
3UTR-3UTR GCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACTGTGGGACGGCTCCTaGGGAACTGGGCGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASLWDGS*GTGRSL
Trigger: CAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCTGTGGGACGGCTCCTaGGGAACTGGGCGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: RGCGSQHRPDDRPASDANLWDGS*GTGRSL
Trigger: CAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAG...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACGGCTCCTGCGGAACTaGGCGCAGCCTGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASRLLRN*AQPVCA
Trigger: AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACACTGGCTCTCACGCTaGAGGTCCCTCGACAGAGGC +
Preference number: 2 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASHWLSR*RSLDRG
Trigger: GCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACAGAGAGCCACGCTGTaGGACGGCTCCTGCGGAACT +
Preference number: 2 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASQRATL*DGSCGT
Trigger: AGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTCTG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACTTGCTGCACCTCTCTaGATAGGGGCCGAGGTCGCT +
Preference number: 2 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASLAAPL*IGAEVA
Trigger: AGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACGAGCACGTCCAACTTaGGGGTCCTCACAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASRARPT*GSSQCC
Trigger: GCAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCTTGCTGCACCTCTCTaGATAGGGGCCGAGGTCGCT +
Preference number: 2 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRLAAPL*IGAEVA
Trigger: AGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCGAGCACGTCCAACTTaGGGGTCCTCACAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRRARPT*GSSQCC
Trigger: GCAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCAGCCTGTGTGTGCTTaGCCTGGGAGATGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: RGCGSQHRPDDRPASDANQPVCA*PGRCLC
Trigger: ACACAGGCATCTCCCAGGCCAAGCACACACAGGCTG...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCATGGGGGTCCTCACAGTaGTGCTATGAACTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASWGSSQ*CYELAS
Trigger: ACTGGCCAGTTCATAGCAGCACTGTGAGGACCCCCA...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTTGGGGGTCCTCACAGTaGTGCTATGAACTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAWGSSQ*CYELAS
Trigger: ACTGGCCAGTTCATAGCAGCACTGTGAGGACCCCCA...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAGGCAAGCCGCGCAGATaGCACTGGCTCTCACGCTGC +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPGKPRR*HWLSRC
Trigger: GCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCC...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACCGCGCAGATGCCACTaGCTCTCACGCTGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPPRRCH*LSRCRS
Trigger: GGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACGGCTCCTGCGGAACTaGGCGCAGCCTGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPRLLRN*AQPVCA
Trigger: AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAATCGCCAGTGACAGCTaGGGCACATCAACAGCCAAT +
Preference number: 2 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASIASDS*GTSTAN
Trigger: ATTGGCTGTTGATGTGCCTCAGCTGTCACTGGCGAT...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGGGAAATGGCTCTCTTaGTGCACCTCTCTGGATAGG +
Preference number: 2 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASGKWLS*CTSLDR
Trigger: CCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCC...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACGGGAAATGGCTCTCTTaGTGCACCTCTCTGGATAGG +
Preference number: 2 (lower is better)
Translates to: RGCGSQHRPDDRPASDANGKWLS*CTSLDR
Trigger: CCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCC...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACACTGGCTCTCACGCTaGAGGTCCCTCGACAGAGGC +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPHWLSR*RSLDRG
Trigger: GCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACAGAGAGCCACGCTGTaGGACGGCTCCTGCGGAACT +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPQRATL*DGSCGT
Trigger: AGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTCTG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACTCCAAGGAGGACAAGTaGGAGAATCCAGAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: RGCGSQHRPDDRPASDANSKEDK*ENPESH
Trigger: GTGGCTCTCTGGATTCTCCCACTTGTCCTCCTTGGA...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGAGGGGCCGAGGTCGCTaGTGTTTTAGATCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQRGRGR*CFRSCQ
Trigger: CTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCT...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACTTGCTGCACCTCTCTaGATAGGGGCCGAGGTCGCT +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPLAAPL*IGAEVA
Trigger: AGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACGAGCACGTCCAACTTaGGGGTCCTCACAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPRARPT*GSSQCC
Trigger: GCAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACCGCTCCACAGGAAGTaGGGATACAGCAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPPLHRK*GYSKSQ
Trigger: CTGGCTCTTGCTGTATCCTCACTTCCTGTGGAGCGG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCTGAGGGGGCCAATATaGAGTAGGCTTGTTACAACT +
Preference number: 2 (lower is better)
Translates to: RGCGSQHRPDDRPASDANLRGPI*SRLVTT
Trigger: AGTTGTAACAAGCCTACTTCATATTGGCCCCCTCAG...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCAGGGCCAGTGCAATTaGGAATACTGCAGTGACTTC +
Preference number: 2 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRQGQCN*EYCSDF
Trigger: GAAGTCACTGCAGTATTCCCAATTGCACTGGCCCTG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACAATGTCACAGGGAAATaGCTCTCTTGCTGCACCTCT +
Preference number: 2 (lower is better)
Translates to: RGCGSQHRPDDRPASDANNVTGK*LSCCTS
Trigger: AGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATT...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAGGCAGCGAGAAGGGCTaGGAAAACTGCAAGCCCCTT +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPGSEKG*ENCKPL
Trigger: AAGGGGCTTGCAGTTTTCCCAGCCCTTCTCGCTGCC...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGTCCAAGGAGGACAAGTaGGAGAATCCAGAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQSKEDK*ENPESH
Trigger: GTGGCTCTCTGGATTCTCCCACTTGTCCTCCTTGGA...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAATCGCCAGTGACAGCTaGGGCACATCAACAGCCAAT +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPIASDS*GTSTAN
Trigger: ATTGGCTGTTGATGTGCCTCAGCTGTCACTGGCGAT...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGTGCTGTTTTAGATCCTaGCAGCTTAGACTGGGTAAG +
Preference number: 2 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRCCFRS*QLRLGK
Trigger: CTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCA...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCAGGGCCAGTGCAATTaGGAATACTGCAGTGACTTC +
Preference number: 2 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQQGQCN*EYCSDF
Trigger: GAAGTCACTGCAGTATTCCCAATTGCACTGGCCCTG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACCTGCCAGCTTAGACTaGGTAAGGCCATGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRPASLD*VRPCPG
Trigger: CCCTGGGCATGGCCTTACCCAGTCTAAGCTGGCAGG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAAACAGTGCCGCAGTTTaGGTCCAGGGCTTTTTCAAC +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPNSAAV*VQGFFN
Trigger: GTTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTT...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCCATGCCCAGGGCCAGTaGAATTGGGAATACTGCAGT +
Preference number: 2 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVHAQGQ*NWEYCS
Trigger: ACTGCAGTATTCCCAATTGCACTGGCCCTGGGCATG...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCATGCCCAGGGCCAGTaGAATTGGGAATACTGCAGT +
Preference number: 2 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGHAQGQ*NWEYCS
Trigger: ACTGCAGTATTCCCAATTGCACTGGCCCTGGGCATG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAATCGCCAGTGACAGCTaGGGCACATCAACAGCCAAT +
Preference number: 2 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRIASDS*GTSTAN
Trigger: ATTGGCTGTTGATGTGCCTCAGCTGTCACTGGCGAT...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAGGTCCTGGAACATTGTaGGTTACATTGCATATAGTG +
Preference number: 2 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPGPGTL*VTLHIV
Trigger: CACTATATGCAATGTAACTCACAATGTTCCAGGACC...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACATGCCCAGGGCCAGTaGAATTGGGAATACTGCAGT +
Preference number: 2 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRHAQGQ*NWEYCS
Trigger: ACTGCAGTATTCCCAATTGCACTGGCCCTGGGCATG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCTGCTGTTTTAGATCCTaGCAGCTTAGACTGGGTAAG +
Preference number: 2 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVCCFRS*QLRLGK
Trigger: CTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCA...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCCGCGCAGATGCCACTaGCTCTCACGCTGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPIPRRCH*LSRCRS
Trigger: GGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCCGCGCAGATGCCACTaGCTCTCACGCTGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDPRRCH*LSRCRS
Trigger: GGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCGGCTCCTGCGGAACTaGGCGCAGCCTGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDRLLRN*AQPVCA
Trigger: AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTTTTGGCGGCACAAGCTaGACTTTGTTGCCATCCTTG +
Preference number: 2 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVFGGTS*TLLPSL
Trigger: CAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAA...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378904.4
3UTR-3UTR TCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTTTGGGAATACTGCAGTaGCTTCTGAAAAGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGLGILQ*LLKSVH
Trigger: ATGGACACTTTTCAGAAGTCACTGCAGTATTCCCAA...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCTTGGGAATACTGCAGTaGCTTCTGAAAAGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVLGILQ*LLKSVH
Trigger: ATGGACACTTTTCAGAAGTCACTGCAGTATTCCCAA...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCTCTCAGCACAGGCCTaGCGACCGCCCAGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPILSAQA*RPPSFR
Trigger: TCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCACTGGCTCTCACGCTaGAGGTCCCTCGACAGAGGC +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPIHWLSR*RSLDRG
Trigger: GCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCCACAGCACCACTGCTaGCTTGGCAGCGAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDPQHHC*LGSEKG
Trigger: GCCCTTCTCGCTGCCAAGGCAGCAGTGGTGCTGTGG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCGGCTCCTGCGGAACTaGGCGCAGCCTGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: TFGWESTCMIETFPIAEIRLLRN*AQPVCA
Trigger: AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCCTGTCCAGAACTCTTaGAGGCCGGGCCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPIPVQNS*RPGQQP
Trigger: TGGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCAGAGAGCCACGCTGTaGGACGGCTCCTGCGGAACT +
Preference number: 2 (lower is better)
Translates to: TFGWESTCMIETFPIAEIQRATL*DGSCGT
Trigger: AGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTCTG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCCTGTCCAGAACTCTTaGAGGCCGGGCCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQPVQNS*RPGQQP
Trigger: TGGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTTCATGTAAAACCGTTTaGCGGCACAAGCTGGACTTT +
Preference number: 2 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVSCKTV*RHKLDF
Trigger: AAAGTCCAGCTTGTGCCGCCAAACGGTTTTACATGA...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
3UTR-3UTR TCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCCGCTCCACAGGAAGTaGGGATACAGCAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPIPLHRK*GYSKSQ
Trigger: CTGGCTCTTGCTGTATCCTCACTTCCTGTGGAGCGG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGACTGGGTAAGGCCATaGCCAGGGCCAGTGCAATTG +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPIDWVRP*PGPVQL
Trigger: CAATTGCACTGGCCCTGGGCATGGCCTTACCCAGTC...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTAGGGGCCGAGGTCGCTaGTGTTTTAGATCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPIRGRGR*CFRSCQ
Trigger: CTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCATCCACAGCACCACTaGTGCCTTGGCAGCGAGAAG +
Preference number: 2 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDHPQHH*CLGSEK
Trigger: CTTCTCGCTGCCAAGGCAGCAGTGGTGCTGTGGATG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGTTCTTCACTTTGCTGTaGAAGAAGACACTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVFFTLL*KKTLLC
Trigger: GCAAAGCAGTGTCTTCTTGCACAGCAAAGTGAAGAA...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
3UTR-3UTR CCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCAGCCTGTGTGTGCTTaGCCTGGGAGATGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDQPVCA*PGRCLC
Trigger: ACACAGGCATCTCCCAGGCCAAGCACACACAGGCTG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCCTCCACCGAGCATCTaGGCAGTGTCTGCCTCCTGT +
Preference number: 2 (lower is better)
Translates to: TFGWESTCMIETFPIAEIPPPSI*AVSASC
Trigger: ACAGGAGGCAGACACTGCCCAGATGCTCGGTGGAGG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCCGCTCCACAGGAAGTaGGGATACAGCAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQPLHRK*GYSKSQ
Trigger: CTGGCTCTTGCTGTATCCTCACTTCCTGTGGAGCGG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGGACTGGGTAAGGCCATaGCCAGGGCCAGTGCAATTG +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQDWVRP*PGPVQL
Trigger: CAATTGCACTGGCCCTGGGCATGGCCTTACCCAGTC...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGAGGGGCCGAGGTCGCTaGTGTTTTAGATCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQRGRGR*CFRSCQ
Trigger: CTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCT...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTAAGGGCTGGGAAAACTaGAAGCCCCTTCCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPIKGWEN*KPLPPS
Trigger: TGAGGGAGGAAGGGGCTTGCAGTTTTCCCAGCCCTT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCAGCCTGTGTGTGCTTaGCCTGGGAGATGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQQPVCA*PGRCLC
Trigger: ACACAGGCATCTCCCAGGCCAAGCACACACAGGCTG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGGCGGCCTTCTCACTCTaGAGCTCCGAAGAACTGAGC +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQAAFSL*SSEELS
Trigger: GCTCAGTTCTTCGGAGCTCCAGAGTGAGAAGGCCGC...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTATCGCCAGTGACAGCTaGGGCACATCAACAGCCAAT +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPIIASDS*GTSTAN
Trigger: ATTGGCTGTTGATGTGCCTCAGCTGTCACTGGCGAT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGAATAGTGAGGCCTCAGTaGCAGGCACTCATCCTCCCC +
Preference number: 2 (lower is better)
Translates to: WNIVSYIAYSVILRASPRIVRPQ*QALILP
Trigger: GGGGAGGATGAGTGCCTGTCACTGAGGCCTCACTAT...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATGGGAAATGGCTCTCTTaGTGCACCTCTCTGGATAGG +
Preference number: 2 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDGKWLS*CTSLDR
Trigger: CCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCC...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGCTTGGCCTGGGAGATaGCTGTGTGTCACACTAAGC +
Preference number: 2 (lower is better)
Translates to: TFGWESTCMIETFPIAEIAWPGR*LCVTLS
Trigger: GCTTAGTGTGACACACAGGCATCTCCCAGGCCAAGC...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTAAGGGCTGGGAAAACTaGAAGCCCCTTCCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: TFGWESTCMIETFPIAEIKGWEN*KPLPPS
Trigger: TGAGGGAGGAAGGGGCTTGCAGTTTTCCCAGCCCTT...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCATCTGGGCAGTGTCTaGCTCCTGTCCAGAACTCTT +
Preference number: 2 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDHLGSV*LLSRTL
Trigger: AAGAGTTCTGGACAGGAGGCAGACACTGCCCAGATG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGACTAGGACATCGCCAGTaGCAGCTGAGGCACATCAAC +
Preference number: 2 (lower is better)
Translates to: WNIVSYIAYSVILRASPRLGHRQ*QLRHIN
Trigger: GTTGATGTGCCTCAGCTGTCACTGGCGATGTCCTAG...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTAAATGGCTCTCTTGCTaGACCTCTCTGGATAGGGGC +
Preference number: 2 (lower is better)
Translates to: TFGWESTCMIETFPIAEIKWLSC*TSLDRG
Trigger: GCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTT...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCCCTTTATTCAACAGTaGCGCAGTTTGGGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQPFIQQ*RSLGPG
Trigger: CCCTGGACCCAAACTGCGGCACTGTTGAATAAAGGG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCAGGGCCAGTGCAATTaGGAATACTGCAGTGACTTC +
Preference number: 2 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDQGQCN*EYCSDF
Trigger: GAAGTCACTGCAGTATTCCCAATTGCACTGGCCCTG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTTTTCTCCAGGCCTCATaGGTCAAAGGCCATCACTGT +
Preference number: 2 (lower is better)
Translates to: TFGWESTCMIETFPIAEIFLQAS*VKGHHC
Trigger: ACAGTGATGGCCTTTGACTCATGAGGCCTGGAGAAA...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTAATGTCACAGGGAAATaGCTCTCTTGCTGCACCTCT +
Preference number: 2 (lower is better)
Translates to: RAQTFGWESTCMIETFPINVTGK*LSCCTS
Trigger: AGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGACAGGGCCAGTGCAATTaGGAATACTGCAGTGACTTC +
Preference number: 2 (lower is better)
Translates to: WNIVSYIAYSVILRASPRQGQCN*EYCSDF
Trigger: GAAGTCACTGCAGTATTCCCAATTGCACTGGCCCTG...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGAATGTCACAGGGAAATaGCTCTCTTGCTGCACCTCT +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQNVTGK*LSCCTS
Trigger: AGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATT...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGAAACAGTGCCGCAGTTTaGGTCCAGGGCTTTTTCAAC +
Preference number: 2 (lower is better)
Translates to: WNIVSYIAYSVILRASPRNSAAV*VQGFFN
Trigger: GTTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTT...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGTTGGGAATACTGCAGTaGCTTCTGAAAAGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQLGILQ*LLKSVH
Trigger: ATGGACACTTTTCAGAAGTCACTGCAGTATTCCCAA...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGGGTCCTGGAACATTGTaGGTTACATTGCATATAGTG +
Preference number: 2 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQGPGTL*VTLHIV
Trigger: CACTATATGCAATGTAACTCACAATGTTCCAGGACC...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR GCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGATGCTGTTTTAGATCCTaGCAGCTTAGACTGGGTAAG +
Preference number: 2 (lower is better)
Translates to: WNIVSYIAYSVILRASPRCCFRS*QLRLGK
Trigger: CTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCA...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR TCA 90 bp TGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCATCTTTGTTGCCATCCTTaGGATGAACCTTTTAAGAAA +
Preference number: 2 (lower is better)
Translates to: CTQVVPIKTPSFEPNYVHLCCHP*DEPFKK
Trigger: TTTCTTAAAAGGTTCATCTCAAGGATGGCAACAAAG...ATGGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378904.4
3UTR-3UTR CAA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTCCGAGCACGTCCAACTaGGGGGTCCTCACAGTGCTG +
Preference number: 3 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAPSTSN*GVLTVL
Trigger: CAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCGG...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CAA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACGCAGCCTGTGTGTGCTaGGCCTGGGAGATGCCTGTG +
Preference number: 3 (lower is better)
Translates to: RGCGSQHRPDDRPASDANAACVC*AWEMPV
Trigger: CACAGGCATCTCCCAGGCCAAGCACACACAGGCTGC...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CAA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCCGAGCACGTCCAACTaGGGGGTCCTCACAGTGCTG +
Preference number: 3 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRPSTSN*GVLTVL
Trigger: CAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCGG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CAA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTCAACAGTGCCGCAGTTaGGGTCCAGGGCTTTTTCAA +
Preference number: 3 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAQQCRS*GPGLFQ
Trigger: TTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTTG...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CAA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACAACAGTGCCGCAGTTaGGGTCCAGGGCTTTTTCAA +
Preference number: 3 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASQQCRS*GPGLFQ
Trigger: TTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTTG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR GCA 72 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTaGCAGCTTAGACTGGGTAAGGCCATGCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: LDRGRGRCCFRS*QLRLGKAMPRA
Trigger: GGCCCTGGGCATGGCCTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR GCA 72 bp CCAGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTaGAGGTCCCTCGACAGAGGCCATAAATCTTTCCCT +
Preference number: 3 (lower is better)
Translates to: PGKPRRCHWLSR*RSLDRGHKSFP
Trigger: AGGGAAAGATTTATGGCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CAA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCACATCAACAGCCAATaGCTAAAGCTGGGCCTAGTC +
Preference number: 3 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRHINSQ*LKLGLV
Trigger: GACTAGGCCCAGCTTTAGCAATTGGCTGTTGATGTG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR GCA 72 bp GCCAGTCCACTAAATGTCACAGGGAAATGGCTCTCTTaGTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGC +
Preference number: 3 (lower is better)
Translates to: ASPLNVTGKWLS*CTSLDRGRGRC
Trigger: GCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAGTGGACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR CCA 72 bp GAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTaGGTAAGGCCATGCCCAGGGCCAGTGCAATTGGGA +
Preference number: 3 (lower is better)
Translates to: EVAAVLDPASLD*VRPCPGPVQLG
Trigger: TCCCAATTGCACTGGCCCTGGGCATGGCCTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR GCA 72 bp AGTCCACTAAATGTCACAGGGAAATGGCTCTCTTGCTaGACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: SPLNVTGKWLSC*TSLDRGRGRCC
Trigger: ACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAGTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR CCA 72 bp GAGGCCATAAATCTTTCCCTCCGAGCACGTCCAACTTaGGGGTCCTCACAGTGCTGCTATGAACTGGCCAGT +
Preference number: 3 (lower is better)
Translates to: EAINLSLRARPT*GSSQCCYELAS
Trigger: ACTGGCCAGTTCATAGCAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCGGAGGGAAAGATTTATGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR CCA 72 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTaGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCT +
Preference number: 3 (lower is better)
Translates to: MSQGNGSLAAPL*IGAEVAAVLDP
Trigger: AGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CAA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCCTGTCCAGAACTCTaGGAGGCCGGGCCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDSCPEL*EAGPAA
Trigger: GGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGGA...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CAA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCCGAGCACGTCCAACTaGGGGGTCCTCACAGTGCTG +
Preference number: 3 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDPSTSN*GVLTVL
Trigger: CAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCGG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CAA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATGCAGCCTGTGTGTGCTaGGCCTGGGAGATGCCTGTG +
Preference number: 3 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDAACVC*AWEMPV
Trigger: CACAGGCATCTCCCAGGCCAAGCACACACAGGCTGC...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR CCA 72 bp CACCGCGAGTGGAAGTCACTGTTGTGTGTACACAGGTaGTCCCAATCAAAACTCCATCTTTTGAGCCCAATT +
Preference number: 3 (lower is better)
Translates to: HREWKSLLCVHR*SQSKLHLLSPI
Trigger: AATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGACTTCCACTCGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
3UTR-3UTR CAA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGTCAAAACTCCATCTTTaGAGCCCAATTATGTCCATT +
Preference number: 3 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVSKLHL*SPIMSI
Trigger: AATGGACATAATTGGGCTCAAAAGATGGAGTTTTGA...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
3UTR TCA 72 bp GTAGTCAACAGTTCACACAAGAAGCTGTACACGGTTTaGTCATGTAAAACCGTTTGGCGGCACAAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: VVNSSHKKLYTV*SCKTVWRHKLD
Trigger: GTCCAGCTTGTGCCGCCAAACGGTTTTACATGATCAAACCGTGTACAGCTTCTTGTGTGAACTGTTGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
3UTR-3UTR CAA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCACATCAACAGCCAATaGCTAAAGCTGGGCCTAGTC +
Preference number: 3 (lower is better)
Translates to: TFGWESTCMIETFPIAEIHINSQ*LKLGLV
Trigger: GACTAGGCCCAGCTTTAGCAATTGGCTGTTGATGTG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
3UTR-3UTR CAA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGACAACAGTGCCGCAGTTaGGGTCCAGGGCTTTTTCAA +
Preference number: 3 (lower is better)
Translates to: WNIVSYIAYSVILRASPRQQCRS*GPGLFQ
Trigger: TTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTTG...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTCAGCACCACGTCACCTaGTCCCGCCTGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAQHHVT*SRLGRL
Trigger: CAGCCTCCCCAGGCGGGAGCAGGTGACGTGGTGCTG...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR GCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTACCGGTGCCCGCGCCTaGTCTGTCTGCCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCATGARA*SVCLWQ
Trigger: CTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGT...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACCCGCCTGGGGAGGCTaGTGGACACCGCTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASPAWGG*WTPLLW
Trigger: CCACAAGAGCGGTGTCCACCAGCCTCCCCAGGCGGG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR TCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGCCGGGAGCAGTGGCTaGTGGGAGGTGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASAGSSG*WEVSMQ
Trigger: CTGCATGGACACCTCCCATCAGCCACTGCTCCCGGC...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGACCGGTGCCCGCGCCTaGTCTGTCTGCCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRTGARA*SVCLWQ
Trigger: CTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGT...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACGGCAAGCCGCGCAGATaGCACTGGCTCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANGKPRR*HWLSRC
Trigger: GCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCC...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGGCCTGGGGAGGCTGGTaGACACCGCTCTTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRAWGGW*TPLLWR
Trigger: GCGCCACAAGAGCGGTGTCCACCAGCCTCCCCAGGC...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCCCGCCTGGGGAGGCTaGTGGACACCGCTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRPAWGG*WTPLLW
Trigger: CCACAAGAGCGGTGTCCACCAGCCTCCCCAGGCGGG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGTCACCTGCTCCCGCCTaGGGAGGCTGGTGGACACCG +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRSPAPA*GGWWTP
Trigger: CGGTGTCCACCAGCCTCCCCAGGCGGGAGCAGGTGA...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR GCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCATCTTGTGGCGCTCCTTaGCCCGGGGCCGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASSCGAP*PGAAKP
Trigger: TGGTTTTGCGGCCCCGGGGCAAGGAGCGCCACAAGA...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR GCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTCACTGGCTCTCACGCTaGAGGTCCCTCGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAHWLSR*RSLDRG
Trigger: GCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTG...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGGGCAAGCCGCGCAGATaGCACTGGCTCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRGKPRR*HWLSRC
Trigger: GCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCC...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCAGAGAGCCACGCTGTaGGACGGCTCCTGCGGAACT +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANQRATL*DGSCGT
Trigger: AGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTCTG...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGCACCACTGCTGCCTTaGCAGCGAGAAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASAPLLP*QREGLG
Trigger: TCCCAGCCCTTCTCGCTGCCAAGGCAGCAGTGGTGC...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACGGCTGTCTGCAGAAGTaGCGGCTGGCACTGCAACTG +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANGCLQK*RLALQL
Trigger: CAGTTGCAGTGCCAGCCGTCACTTCTGCAGACAGCC...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGGCTGTCTGCAGAAGTaGCGGCTGGCACTGCAACTG +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASGCLQK*RLALQL
Trigger: CAGTTGCAGTGCCAGCCGTCACTTCTGCAGACAGCC...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCTGTGGGACGGCTCCTaGGGAACTGGGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQLWDGS*GTGRSL
Trigger: CAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGGCCTGGGGAGGCTGGTaGACACCGCTCTTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQAWGGW*TPLLWR
Trigger: GCGCCACAAGAGCGGTGTCCACCAGCCTCCCCAGGC...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCGAGCACGTCCAACTTaGGGGTCCTCACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANRARPT*GSSQCC
Trigger: GCAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCG...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCAGAGAGCCACGCTGTaGGACGGCTCCTGCGGAACT +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRQRATL*DGSCGT
Trigger: AGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTCTG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCCTGTCCAGAACTCTTaGAGGCCGGGCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRPVQNS*RPGQQP
Trigger: TGGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTCCGCTCCACAGGAAGTaGGGATACAGCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAPLHRK*GYSKSQ
Trigger: CTGGCTCTTGCTGTATCCTCACTTCCTGTGGAGCGG...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACGACTGGGTAAGGCCATaGCCAGGGCCAGTGCAATTG +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANDWVRP*PGPVQL
Trigger: CAATTGCACTGGCCCTGGGCATGGCCTTACCCAGTC...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCCCGCGACCCGCAGCTaGCACCGCGCCTGCGGATTG +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGPATRS*HRACGL
Trigger: CAATCCGCAGGCGCGGTGGCAGCTGCGGGTCGCGGG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCATGGACACCGCTCTTGTaGCGCTCCTTGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPWTPLL*RSLPRG
Trigger: GCCCCGGGGCAAGGAGCGCCACAAGAGCGGTGTCCA...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTGTTCCACGGTCACTGTaGTCTCGGAAGACGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAVPRSL*SRKTGS
Trigger: TGAGCCCGTCTTCCGAGACCACAGTGACCGTGGAAC...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCTGCAACTGCTAGTCTaGGGGCTTGCCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANLQLLV*GLALEL
Trigger: CAGTTCCAGGGCAAGCCCCCAGACTAGCAGTTGCAG...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCCTGCCAGCTTAGACTaGGTAAGGCCATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRPASLD*VRPCPG
Trigger: CCCTGGGCATGGCCTTACCCAGTCTAAGCTGGCAGG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTGGCAGCGAGAAGGGCTaGGAAAACTGCAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAGSEKG*ENCKPL
Trigger: AAGGGGCTTGCAGTTTTCCCAGCCCTTCTCGCTGCC...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTCTAGGACATCGCCAGTaGCAGCTGAGGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCALGHRQ*QLRHIN
Trigger: GTTGATGTGCCTCAGCTGTCACTGGCGATGTCCTAG...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACTAGGACATCGCCAGTaGCAGCTGAGGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASLGHRQ*QLRHIN
Trigger: GTTGATGTGCCTCAGCTGTCACTGGCGATGTCCTAG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGCTAGTCTGGGGGCTTaGCCTGGAACTGTACCCATT +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASASLGA*PGTVPI
Trigger: AATGGGTACAGTTCCAGGGCAAGCCCCCAGACTAGC...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACGCTAGTCTGGGGGCTTaGCCTGGAACTGTACCCATT +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANASLGA*PGTVPI
Trigger: AATGGGTACAGTTCCAGGGCAAGCCCCCAGACTAGC...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTACTGAACTGGCTGTCTaGAGAAGTGACGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCATELAV*RSDGWH
Trigger: GTGCCAGCCGTCACTTCTGCAGACAGCCAGTTCAGT...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGAGGGGCCGAGGTCGCTaGTGTTTTAGATCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRRGRGR*CFRSCQ
Trigger: CTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCT...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACGCTTGGCCTGGGAGATaGCTGTGTGTCACACTAAGC +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANAWPGR*LCVTLS
Trigger: GCTTAGTGTGACACACAGGCATCTCCCAGGCCAAGC...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCCACAGCACCACTGCTaGCTTGGCAGCGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQPQHHC*LGSEKG
Trigger: GCCCTTCTCGCTGCCAAGGCAGCAGTGGTGCTGTGG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACTGCTCTGTCTGCCTCTaGCAGTTCCACGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANCSVCL*QFHGHC
Trigger: ACAGTGACCGTGGAACTGCCAGAGGCAGACAGAGCA...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGAAGAAGCCCATCAGTTaGCCGGCCTGGGCACCGGTG +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQKKPIS*PAWAPV
Trigger: CACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTT...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACTCTGGGGGCTTGCCCTaGAACTGTACCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANSGGLP*NCTHCH
Trigger: ATGGCAATGGGTACAGTTCCAGGGCAAGCCCCCAGA...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTTCTGGGGGCTTGCCCTaGAACTGTACCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCASGGLP*NCTHCH
Trigger: ATGGCAATGGGTACAGTTCCAGGGCAAGCCCCCAGA...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCTGCAACTGCTAGTCTaGGGGCTTGCCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRLQLLV*GLALEL
Trigger: CAGTTCCAGGGCAAGCCCCCAGACTAGCAGTTGCAG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCAGCCTGTGTGTGCTTaGCCTGGGAGATGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRQPVCA*PGRCLC
Trigger: ACACAGGCATCTCCCAGGCCAAGCACACACAGGCTG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCAGAGAGCCACGCTGTaGGACGGCTCCTGCGGAACT +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQQRATL*DGSCGT
Trigger: AGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTCTG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGGCGGCCTTCTCACTCTaGAGCTCCGAAGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRAAFSL*SSEELS
Trigger: GCTCAGTTCTTCGGAGCTCCAGAGTGAGAAGGCCGC...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTATCGCCAGTGACAGCTaGGGCACATCAACAGCCAAT +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAIASDS*GTSTAN
Trigger: ATTGGCTGTTGATGTGCCTCAGCTGTCACTGGCGAT...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTCATGCCCAGGGCCAGTaGAATTGGGAATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAHAQGQ*NWEYCS
Trigger: ACTGCAGTATTCCCAATTGCACTGGCCCTGGGCATG...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAAAATGGCTCTCTTGCTaGACCTCTCTGGATAGGGGC +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASKWLSC*TSLDRG
Trigger: GCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTT...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCTGTGGGACGGCTCCTaGGGAACTGGGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGLWDGS*GTGRSL
Trigger: CAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGAAGGGCTGGGAAAACTaGAAGCCCCTTCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRKGWEN*KPLPPS
Trigger: TGAGGGAGGAAGGGGCTTGCAGTTTTCCCAGCCCTT...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTCTCCCGGGTCATCCCTaGTGGGCAGCCCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCLPGHP*WAALEP
Trigger: GGGCTCCAGGGCTGCCCAGCAGGGATGACCCGGGAG...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTACTTTGCAGCCATACTaGAGCGCCAGCTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCATLQPY*SASLLR
Trigger: CCTCAACAAGCTGGCGCTGCAGTATGGCTGCAAAGT...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409796.5
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCCTGCCAGCTTAGACTaGGTAAGGCCATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQPASLD*VRPCPG
Trigger: CCCTGGGCATGGCCTTACCCAGTCTAAGCTGGCAGG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCGAGCACGTCCAACTTaGGGGTCCTCACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQRARPT*GSSQCC
Trigger: GCAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTACAGCATTCCACCACTaGATGCCACAATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCATAFHH*MPQSAP
Trigger: TGGTGCAGATTGTGGCATTCAGTGGTGGAATGCTGT...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCTCCCTCAGGTGTTCTaGTCGCCTTTTACAACAAGG +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANLPQVF*SPFTTR
Trigger: CCTTGTTGTAAAAGGCGATCAGAACACCTGAGGGAG...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTTTTCTCCAGGCCTCATaGGTCAAAGGCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAFLQAS*VKGHHC
Trigger: ACAGTGATGGCCTTTGACTCATGAGGCCTGGAGAAA...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCATTTCTCCAGGCCTCATaGGTCAAAGGCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASFLQAS*VKGHHC
Trigger: ACAGTGATGGCCTTTGACTCATGAGGCCTGGAGAAA...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGGACTGGGTAAGGCCATaGCCAGGGCCAGTGCAATTG +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQDWVRP*PGPVQL
Trigger: CAATTGCACTGGCCCTGGGCATGGCCTTACCCAGTC...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGGCAAGCCGCGCAGATaGCACTGGCTCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVGKPRR*HWLSRC
Trigger: GCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCC...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCCCTTTATTCAACAGTaGCGCAGTTTGGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRPFIQQ*RSLGPG
Trigger: CCCTGGACCCAAACTGCGGCACTGTTGAATAAAGGG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACGGCCTTGGAAGGTCTTaGTTAACAATTCCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANGLGRS*LTIPRA
Trigger: GGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCC...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACACATGTATACGTGGCTaGTCGGAGTCCCACACACAA +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANTCIRG*SESHTQ
Trigger: TTGTGTGTGGGACTCCGACCAGCCACGTATACATGT...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCCCGCGCAGATGCCACTaGCTCTCACGCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVPRRCH*LSRCRS
Trigger: GGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGG...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTAACAGTGCCGCAGTTTaGGTCCAGGGCTTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCANSAAV*VQGFFN
Trigger: GTTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTT...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCAGCCTGTGTGTGCTTaGCCTGGGAGATGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQQPVCA*PGRCLC
Trigger: ACACAGGCATCTCCCAGGCCAAGCACACACAGGCTG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCCGGCTCCTGCGGAACTaGGCGCAGCCTGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVRLLRN*AQPVCA
Trigger: AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCG...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGGGCAGCGAGAAGGGCTaGGAAAACTGCAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQGSEKG*ENCKPL
Trigger: AAGGGGCTTGCAGTTTTCCCAGCCCTTCTCGCTGCC...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCACTGAGGGGGCCAATATaGAGTAGGCTTGTTACAACT +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASLRGPI*SRLVTT
Trigger: AGTTGTAACAAGCCTACTTCATATTGGCCCCCTCAG...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAATAGTGAGGCCTCAGTaGCAGGCACTCATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPIVRPQ*QALILP
Trigger: GGGGAGGATGAGTGCCTGTCACTGAGGCCTCACTAT...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTGAGCCCTGTGCCAGCTaGTTGGCTGCAGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCEPCAS*LAAACS
Trigger: CGAGCAGGCTGCAGCCAATCAGCTGGCACAGGGCTC...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCGCGCCTGCTCTGTCTaGCTCTGGCAGTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGRACSV*LWQFHG
Trigger: ACCGTGGAACTGCCAGAGGCAGACAGAGCAGGCGCG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTAGGCGTCTTCGGAGGTaGCGGGAGCAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGRRLRR*REQWLM
Trigger: CATCAGCCACTGCTCCCGGCACCTCCGAAGACGCCT...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGTGGGGGTCCTCACAGTaGTGCTATGAACTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQWGSSQ*CYELAS
Trigger: ACTGGCCAGTTCATAGCAGCACTGTGAGGACCCCCA...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCACTGGCTCTCACGCTaGAGGTCCCTCGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGHWLSR*RSLDRG
Trigger: GCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGGCTTGGCCTGGGAGATaGCTGTGTGTCACACTAAGC +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQAWPGR*LCVTLS
Trigger: GCTTAGTGTGACACACAGGCATCTCCCAGGCCAAGC...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACTGTGGGACGGCTCCTaGGGAACTGGGCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRLWDGS*GTGRSL
Trigger: CAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCCACAGCACCACTGCTaGCTTGGCAGCGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGPQHHC*LGSEKG
Trigger: GCCCTTCTCGCTGCCAAGGCAGCAGTGGTGCTGTGG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACATCCACAGCACCACTaGTGCCTTGGCAGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPHPQHH*CLGSEK
Trigger: CTTCTCGCTGCCAAGGCAGCAGTGGTGCTGTGGATG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTTTAAACATGTATACGTaGCTGGTCGGAGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCALNMYT*LVGVPH
Trigger: GTGTGGGACTCCGACCAGCCACGTATACATGTTTAA...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACCCGCCTGGGGAGGCTaGTGGACACCGCTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRPAWGG*WTPLLW
Trigger: CCACAAGAGCGGTGTCCACCAGCCTCCCCAGGCGGG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGGTTTCAGTTCTTTGTaGGTCTCCATCAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASGFSSL*VSIRIP
Trigger: TGGGATCCTGATGGAGACCCACAAAGAACTGAAACC...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCAAGAAGCCCATCAGTTaGCCGGCCTGGGCACCGGTG +
Preference number: 4 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVKKPIS*PAWAPV
Trigger: CACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTT...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGTCTGGGGGCTTGCCCTaGAACTGTACCCATTGCCAT +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQSGGLP*NCTHCH
Trigger: ATGGCAATGGGTACAGTTCCAGGGCAAGCCCCCAGA...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAGCGGCCTTCTCACTCTaGAGCTCCGAAGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPAAFSL*SSEELS
Trigger: GCTCAGTTCTTCGGAGCTCCAGAGTGAGAAGGCCGC...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCCCTGTCCAGAACTCTTaGAGGCCGGGCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVPVQNS*RPGQQP
Trigger: TGGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGG...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTTCCCAACGCCCCCACTaGCCTCCCCCTTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVSQRPH*PPPCRL
Trigger: GAGCCGACAAGGGGGAGGCCAGTGGGGGCGTTGGGA...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACTAGGACATCGCCAGTaGCAGCTGAGGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPLGHRQ*QLRHIN
Trigger: GTTGATGTGCCTCAGCTGTCACTGGCGATGTCCTAG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACTCTCAGCACAGGCCTaGCGACCGCCCAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLLSAQA*RPPSFR
Trigger: TCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTATCTTGTGGCGCTCCTTaGCCCGGGGCCGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLSCGAP*PGAAKP
Trigger: TGGTTTTGCGGCCCCGGGGCAAGGAGCGCCACAAGA...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR GCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACGCGCCTGCTCTGTCTaGCTCTGGCAGTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLRACSV*LWQFHG
Trigger: ACCGTGGAACTGCCAGAGGCAGACAGAGCAGGCGCG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAAGGCGTCTTCGGAGGTaGCGGGAGCAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLRRLRR*REQWLM
Trigger: CATCAGCCACTGCTCCCGGCACCTCCGAAGACGCCT...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCATGCCCAGGGCCAGTaGAATTGGGAATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQHAQGQ*NWEYCS
Trigger: ACTGCAGTATTCCCAATTGCACTGGCCCTGGGCATG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAAAGGGCTGGGAAAACTaGAAGCCCCTTCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPKGWEN*KPLPPS
Trigger: TGAGGGAGGAAGGGGCTTGCAGTTTTCCCAGCCCTT...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCAGCTGCCACCGCGCCTaGGGATTGGCTACGAACATC +
Preference number: 4 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVSCHRA*GLATNI
Trigger: GATGTTCGTAGCCAATCCGCAGGCGCGGTGGCAGCT...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000545021.2
CDS-3UTR GCA 90 bp TCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGCGGTCGGTCGTCCGGTaGTCACAAGCAGCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SFLSTLMATPPRVEVTVVRSVVR*SQAARG
Trigger: TCCTCGGGCTGCTTGTGAGCACCGGACGACCGACCG...CACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACCCACACACAACAGCTaGGCCTTGGAAGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPPTHNS*ALEGLG
Trigger: ACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAAAGAAGCCCATCAGTTaGCCGGCCTGGGCACCGGTG +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLKKPIS*PAWAPV
Trigger: CACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTT...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCTTGCTGCACCTCTCTaGATAGGGGCCGAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGLAAPL*IGAEVA
Trigger: AGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCCTTGCTGCACCTCTCTaGATAGGGGCCGAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVLAAPL*IGAEVA
Trigger: AGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAG...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGGCCCATAGGAAGCAGTaGGCCACGCAGTCCCACCGG +
Preference number: 4 (lower is better)
Translates to: SFLSTLMATPPRVEVTVVAHRKQ*ATQSHR
Trigger: CCGGTGGGACTGCGTGGCCCACTGCTTCCTATGGGC...CACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp TCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGCCGGGTCATCCCTGCTaGGCAGCCCTGGAGCCCATA +
Preference number: 4 (lower is better)
Translates to: SFLSTLMATPPRVEVTVVPGHPC*AALEPI
Trigger: TATGGGCTCCAGGGCTGCCCAGCAGGGATGACCCGG...CACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGGGGACACAAGGCGCTaGCTTTGCCACCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVGDTRR*LCHQAA
Trigger: GGCTGCCTGGTGGCAAAGCCAGCGCCTTGTGTCCCC...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCGCAAAACCACACGGTaGGACTCTTCTTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQRKTTR*DSSSEE
Trigger: CTCTTCTGAAGAAGAGTCTCACCGTGTGGTTTTGCG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR TCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGGCTGTCTGCAGAAGTaGCGGCTGGCACTGCAACTG +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLGCLQK*RLALQL
Trigger: CAGTTGCAGTGCCAGCCGTCACTTCTGCAGACAGCC...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCCGCTCCACAGGAAGTaGGGATACAGCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGPLHRK*GYSKSQ
Trigger: CTGGCTCTTGCTGTATCCTCACTTCCTGTGGAGCGG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTATAGTGAGGCCTCAGTaGCAGGCACTCATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGIVRPQ*QALILP
Trigger: GGGGAGGATGAGTGCCTGTCACTGAGGCCTCACTAT...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACTCTCAGCACAGGCCTaGCGACCGCCCAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRLSAQA*RPPSFR
Trigger: TCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTGGTCCTGGAACATTGTaGGTTACATTGCATATAGTG +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAGPGTL*VTLHIV
Trigger: CACTATATGCAATGTAACTCACAATGTTCCAGGACC...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACGATGGGAGGTGTCCATaGAGTAACTTTCATGTAGAA +
Preference number: 4 (lower is better)
Translates to: RGCGSQHRPDDRPASDANDGRCP*SNFHVE
Trigger: TTCTACATGAAAGTTACTGCATGGACACCTCCCATC...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTGATGGGAGGTGTCCATaGAGTAACTTTCATGTAGAA +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCADGRCP*SNFHVE
Trigger: TTCTACATGAAAGTTACTGCATGGACACCTCCCATC...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAAGGCGTCTTCGGAGGTaGCGGGAGCAGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRRRLRR*REQWLM
Trigger: CATCAGCCACTGCTCCCGGCACCTCCGAAGACGCCT...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTGACTGGGTAAGGCCATaGCCAGGGCCAGTGCAATTG +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGDWVRP*PGPVQL
Trigger: CAATTGCACTGGCCCTGGGCATGGCCTTACCCAGTC...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTAGGGGCCGAGGTCGCTaGTGTTTTAGATCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGRGRGR*CFRSCQ
Trigger: CTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCT...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACCACAGCACCACTGCTaGCTTGGCAGCGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRPQHHC*LGSEKG
Trigger: GCCCTTCTCGCTGCCAAGGCAGCAGTGGTGCTGTGG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGGGCCTTGGAAGGTCTTaGTTAACAATTCCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQGLGRS*LTIPRA
Trigger: GGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCC...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAAAGAAGCCCATCAGTTaGCCGGCCTGGGCACCGGTG +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRKKPIS*PAWAPV
Trigger: CACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTT...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACCTGCCAGCTTAGACTaGGTAAGGCCATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLPASLD*VRPCPG
Trigger: CCCTGGGCATGGCCTTACCCAGTCTAAGCTGGCAGG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGCACCACTGCTGCCTTaGCAGCGAGAAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRAPLLP*QREGLG
Trigger: TCCCAGCCCTTCTCGCTGCCAAGGCAGCAGTGGTGC...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACCTGTCCAGAACTCTTaGAGGCCGGGCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRPVQNS*RPGQQP
Trigger: TGGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACCTCCACCGAGCATCTaGGCAGTGTCTGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLPPPSI*AVSASC
Trigger: ACAGGAGGCAGACACTGCCCAGATGCTCGGTGGAGG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGCTGAGGGGGCCAATATaGAGTAGGCTTGTTACAACT +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQLRGPI*SRLVTT
Trigger: AGTTGTAACAAGCCTACTTCATATTGGCCCCCTCAG...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAATAGTGAGGCCTCAGTaGCAGGCACTCATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLIVRPQ*QALILP
Trigger: GGGGAGGATGAGTGCCTGTCACTGAGGCCTCACTAT...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp TCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTTGCAGGCTTTGGGCTaGGGACGAGCTCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SFLSTLMATPPRVEVTVVLQALG*GRALPR
Trigger: CCTGGGAAGAGCTCGTCCTCAGCCCAAAGCCTGCAA...CACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTTGGGGGTCCTCACAGTaGTGCTATGAACTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGWGSSQ*CYELAS
Trigger: ACTGGCCAGTTCATAGCAGCACTGTGAGGACCCCCA...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAAGCTGCCACCGCGCCTaGGGATTGGCTACGAACATC +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRSCHRA*GLATNI
Trigger: GATGTTCGTAGCCAATCCGCAGGCGCGGTGGCAGCT...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000545021.2
CDS-3UTR GCA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTCCTGATCCCAGCTGTTaGAGGCTTTGGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCPDPSC*RLWAED
Trigger: GTCCTCAGCCCAAAGCCTGCAACAGCTGGGATCAGG...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGTCAGTCGGAGCCCTGTaGCAGCTGATTGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVSVGAL*QLIGCS
Trigger: GCTGCAGCCAATCAGCTGGCACAGGGCTCCGACTGA...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTCTTGGCTCCCCTGGGTaGCTTGCTCTAGGCAGTATC +
Preference number: 4 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCLGSPG*LALGSI
Trigger: GATACTGCCTAGAGCAAGGCACCCAGGGGAGCCAAG...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACTGCAACTGCTAGTCTaGGGGCTTGCCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLLQLLV*GLALEL
Trigger: CAGTTCCAGGGCAAGCCCCCAGACTAGCAGTTGCAG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGGCAGCGAGAAGGGCTaGGAAAACTGCAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLGSEKG*ENCKPL
Trigger: AAGGGGCTTGCAGTTTTCCCAGCCCTTCTCGCTGCC...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACCTCCACCGAGCATCTaGGCAGTGTCTGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRPPPSI*AVSASC
Trigger: ACAGGAGGCAGACACTGCCCAGATGCTCGGTGGAGG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACATTCCACCACTGAATaGCACAATCTGCACCATCCA +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPHSTTE*HNLHHP
Trigger: TGGATGGTGCAGATTGTGGCATTCAGTGGTGGAATG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCCCGCGACCCGCAGCTaGCACCGCGCCTGCGGATTG +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDPATRS*HRACGL
Trigger: CAATCCGCAGGCGCGGTGGCAGCTGCGGGTCGCGGG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000545021.2
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACCCACACACAACAGCTaGGCCTTGGAAGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLPTHNS*ALEGLG
Trigger: ACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGTTCCACGGTCACTGTaGTCTCGGAAGACGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRVPRSL*SRKTGS
Trigger: TGAGCCCGTCTTCCGAGACCACAGTGACCGTGGAAC...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGGCACGCTCAATATCCTaGTCAATCCCCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQARSIS*SIPLKK
Trigger: CTTCTTTAAGGGGATTGACCAGGATATTGAGCGTGC...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACTGCAACTGCTAGTCTaGGGGCTTGCCCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRLQLLV*GLALEL
Trigger: CAGTTCCAGGGCAAGCCCCCAGACTAGCAGTTGCAG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAAATGTCACAGGGAAATaGCTCTCTTGCTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPNVTGK*LSCCTS
Trigger: AGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATT...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCATCAAGTCTTTGGTCCTaGAACATTGTGAGTTACATT +
Preference number: 4 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASSSLWS*NIVSYI
Trigger: AATGTAACTCACAATGTTCCAGGACCAAAGACTTGA...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTAGCTGTTGCAGGCTTTaGGCTGAGGACGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCSCCRL*AEDELF
Trigger: GAAGAGCTCGTCCTCAGCCCAAAGCCTGCAACAGCT...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGCACCGGGGCCTAATCTaGCTGTTGCATGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVHRGLI*LLHAQC
Trigger: GCACTGTGCATGCAACAGCCAGATTAGGCCCCGGTG...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAATCGCCAGTGACAGCTaGGGCACATCAACAGCCAAT +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLIASDS*GTSTAN
Trigger: ATTGGCTGTTGATGTGCCTCAGCTGTCACTGGCGAT...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTTTTCTCCAGGCCTCATaGGTCAAAGGCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGFLQAS*VKGHHC
Trigger: ACAGTGATGGCCTTTGACTCATGAGGCCTGGAGAAA...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTTGGCACCAGCCAAGATaGTTTTCAGTCGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVWHQPR*FSVGAL
Trigger: CAGGGCTCCGACTGAAAATCATCTTGGCTGGTGCCA...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGGCACAGTGCTGTGGATaGGTGGAATCCATTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVAQCCG*VESIRP
Trigger: AGGCCGAATGGATTCCACTCATCCACAGCACTGTGC...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGCTAGTCTGGGGGCTTaGCCTGGAACTGTACCCATT +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRASLGA*PGTVPI
Trigger: AATGGGTACAGTTCCAGGGCAAGCCCCCAGACTAGC...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACATGCCCAGGGCCAGTaGAATTGGGAATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLHAQGQ*NWEYCS
Trigger: ACTGCAGTATTCCCAATTGCACTGGCCCTGGGCATG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGCTTGGCCTGGGAGATaGCTGTGTGTCACACTAAGC +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRAWPGR*LCVTLS
Trigger: GCTTAGTGTGACACACAGGCATCTCCCAGGCCAAGC...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAAAGGGCTGGGAAAACTaGAAGCCCCTTCCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRKGWEN*KPLPPS
Trigger: TGAGGGAGGAAGGGGCTTGCAGTTTTCCCAGCCCTT...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTCGAAACATTTCCTATTaGAGAGATTCAGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCARNISY*RDSEVL
Trigger: AAGAACTTCTGAATCTCTGCAATAGGAAATGTTTCG...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCTGCCAGCTGATTGGCTaGAGCCTGCTCGGTCGGTCG +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPCQLIG*SLLGRS
Trigger: CGACCGACCGAGCAGGCTGCAGCCAATCAGCTGGCA...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGCTCCCCTGGGTGCCTTaGTCTAGGCAGTATCCTGTT +
Preference number: 4 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVLPWVP*SRQYPV
Trigger: AACAGGATACTGCCTAGAGCAAGGCACCCAGGGGAG...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCACAAGGCGCTGGCTTTaGCACCAGGCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPTRRWL*HQAAPS
Trigger: GGAAGGGGCTGCCTGGTGGCAAAGCCAGCGCCTTGT...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGATGCTCTGTCTGCCTCTaGCAGTTCCACGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRCSVCL*QFHGHC
Trigger: ACAGTGACCGTGGAACTGCCAGAGGCAGACAGAGCA...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCAACAGTGCCGCAGTTTaGGTCCAGGGCTTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVNSAAV*VQGFFN
Trigger: GTTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTT...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACCCTGTGCCAGCTGATTaGCTGCAGCCTGCTCGGTCG +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNPVPAD*LQPARS
Trigger: CGACCGAGCAGGCTGCAGCCAATCAGCTGGCACAGG...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCCCTGCTTGGCTCCCCTaGGTGCCTTGCTCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPPAWLP*VPCSRQ
Trigger: CTGCCTAGAGCAAGGCACCCAGGGGAGCCAAGCAGG...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTAGTGCTGTGGATGAGTaGAATCCATTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCSAVDE*NPFGLQ
Trigger: CTGGAGGCCGAATGGATTCCACTCATCCACAGCACT...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp TCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGCCAGTAAAGACGGACTaGCTCTTCCTGTGCGTCGAG +
Preference number: 4 (lower is better)
Translates to: SFLSTLMATPPRVEVTVVPVKTD*LFLCVE
Trigger: CTCGACGCACAGGAAGAGCCAGTCCGTCTTTACTGG...CACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCATTGGGAATACTGCAGTaGCTTCTGAAAAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPLGILQ*LLKSVH
Trigger: ATGGACACTTTTCAGAAGTCACTGCAGTATTCCCAA...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTATTTCTCCAGGCCTCATaGGTCAAAGGCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLFLQAS*VKGHHC
Trigger: ACAGTGATGGCCTTTGACTCATGAGGCCTGGAGAAA...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAGGGAAAGCACTTGCATaGTCGAAACATTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPGKALA*SKHFLL
Trigger: CAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCC...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCCCCGCAGAAAGTTGCTaGGCCCCGTCTGTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPPAESC*APSVRG
Trigger: ACCTCTCACAGACGGGGCTCAGCAACTTTCTGCGGG...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGAAAATAAAATGTGTTTaGAGCCATACTGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQKIKCV*SHTAAP
Trigger: TGGCGCTGCAGTATGGCTGCAAACACATTTTATTTT...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344791.6
CDS-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATACCGGTGCCCGCGCCTaGTCTGTCTGCCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDTGARA*SVCLWQ
Trigger: CTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGT...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTACCGGTGCCCGCGCCTaGTCTGTCTGCCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPITGARA*SVCLWQ
Trigger: CTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCCTGAATGCCACAATCTaGACCATCCATAGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVLNATI*TIHRRL
Trigger: AAGACGCCTATGGATGGTGCAGATTGTGGCATTCAG...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACATCTGGGCAGTGTCTaGCTCCTGTCCAGAACTCTT +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRHLGSV*LLSRTL
Trigger: AAGAGTTCTGGACAGGAGGCAGACACTGCCCAGATG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAACATGTATACGTGGCTaGTCGGAGTCCCACACACAA +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLTCIRG*SESHTQ
Trigger: TTGTGTGTGGGACTCCGACCAGCCACGTATACATGT...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATGCCTGGGGAGGCTGGTaGACACCGCTCTTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDAWGGW*TPLLWR
Trigger: GCGCCACAAGAGCGGTGTCCACCAGCCTCCCCAGGC...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACAGGGCCAGTGCAATTaGGAATACTGCAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLQGQCN*EYCSDF
Trigger: GAAGTCACTGCAGTATTCCCAATTGCACTGGCCCTG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTCCACTCCACCGCGAGTaGAAGTCACTGTTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVPLHRE*KSLLCV
Trigger: TACACACAACAGTGACTTCCACTCGCGGTGGAGTGG...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCCGGGAGCAGTGGCTaGTGGGAGGTGTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIAGSSG*WEVSMQ
Trigger: CTGCATGGACACCTCCCATCAGCCACTGCTCCCGGC...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAACAGCATTCCACCACTaGATGCCACAATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRTAFHH*MPQSAP
Trigger: TGGTGCAGATTGTGGCATTCAGTGGTGGAATGCTGT...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACTCCCTCAGGTGTTCTaGTCGCCTTTTACAACAAGG +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRLPQVF*SPFTTR
Trigger: CCTTGTTGTAAAAGGCGATCAGAACACCTGAGGGAG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACGTGAGAGGTAAGCCCTaGTCCCAGCTGTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNVRGKP*SQLLQA
Trigger: AGCCTGCAACAGCTGGGATCAGGGCTTACCTCTCAC...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp TGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCGCTGAGCCCCGTCTGTaGGAGGTAAGCCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: CVHRWSQSKLHLLSPIMSAEPRL*EVSPDP
Trigger: GGGATCAGGGCTTACCTCTCACAGACGGGGCTCAGC...GGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCAGCACCACGTCACCTaGTCCCGCCTGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIQHHVT*SRLGRL
Trigger: CAGCCTCCCCAGGCGGGAGCAGGTGACGTGGTGCTG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTTGGGCCAGCTCCCGCTaGAGCAGCACCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIWASSR*SSTTSP
Trigger: AGGTGACGTGGTGCTGCTGCAGCGGGAGCTGGCCCA...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR GCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACATTCCACCACTGAATaGCACAATCTGCACCATCCA +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLHSTTE*HNLHHP
Trigger: TGGATGGTGCAGATTGTGGCATTCAGTGGTGGAATG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTTGCTGTTTTAGATCCTaGCAGCTTAGACTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGCCFRS*QLRLGK
Trigger: CTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCA...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTACGTCCCAGTATaGTGGCAGGCACTTAATGGT +
Preference number: 4 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVVYVPV*WQALNG
Trigger: ACCATTAAGTGCCTGCCAGCATACTGGGACGTACAC...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTATTAAACATGTATACGTaGCTGGTCGGAGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLLNMYT*LVGVPH
Trigger: GTGTGGGACTCCGACCAGCCACGTATACATGTTTAA...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGTGGACACCGCTCTTGTaGCGCTCCTTGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQWTPLL*RSLPRG
Trigger: GCCCCGGGGCAAGGAGCGCCACAAGAGCGGTGTCCA...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGGTTTCAGTTCTTTGTaGGTCTCCATCAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLGFSSL*VSIRIP
Trigger: TGGGATCCTGATGGAGACCCACAAAGAACTGAAACC...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTGCACGCTCAATATCCTaGTCAATCCCCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGARSIS*SIPLKK
Trigger: CTTCTTTAAGGGGATTGACCAGGATATTGAGCGTGC...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGTGGGCCAGCTCCCGCTaGAGCAGCACCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQWASSR*SSTTSP
Trigger: AGGTGACGTGGTGCTGCTGCAGCGGGAGCTGGCCCA...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTTGGGCCAGCTCCCGCTaGAGCAGCACCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIWASSR*SSTTSP
Trigger: AGGTGACGTGGTGCTGCTGCAGCGGGAGCTGGCCCA...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACTGAATGCCACAATCTaGACCATCCATAGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRLNATI*TIHRRL
Trigger: AAGACGCCTATGGATGGTGCAGATTGTGGCATTCAG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGATGGACACCGCTCTTGTaGCGCTCCTTGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRWTPLL*RSLPRG
Trigger: GCCCCGGGGCAAGGAGCGCCACAAGAGCGGTGTCCA...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGATCACCTGCTCCCGCCTaGGGAGGCTGGTGGACACCG +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRSPAPA*GGWWTP
Trigger: CGGTGTCCACCAGCCTCCCCAGGCGGGAGCAGGTGA...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCCGCGCAGATGCCACTaGCTCTCACGCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIPRRCH*LSRCRS
Trigger: GGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCCGCGCAGATGCCACTaGCTCTCACGCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQPRRCH*LSRCRS
Trigger: GGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCACGTTCCAGGTCAAGTaGGCTTGTGTCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPTFQVK*ACVLIP
Trigger: CGGGATGAGGACACAAGCCCACTTGACCTGGAACGT...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTACTAAATTTTTGCGCTaGCTACGGTGGGGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCTKFLR*LRWGSY
Trigger: ATAAGAGCCCCACCGTAGCCAGCGCAAAAATTTAGT...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGTACGTCCCAGTATGCTaGCAGGCACTTAATGGTCAT +
Preference number: 4 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVYVPVC*QALNGH
Trigger: ATGACCATTAAGTGCCTGCCAGCATACTGGGACGTA...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGGCTGTCTGCAGAAGTaGCGGCTGGCACTGCAACTG +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIGCLQK*RLALQL
Trigger: CAGTTGCAGTGCCAGCCGTCACTTCTGCAGACAGCC...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCTCTCAGCACAGGCCTaGCGACCGCCCAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEILSAQA*RPPSFR
Trigger: TCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTCTTATTAGCAGGTTTTaGAAGCTGGTTGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCLISRF*KLVESC
Trigger: ACAGGACTCAACCAGCTTTCAAAACCTGCTAATAAG...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTTCTTGTGGCGCTCCTTaGCCCGGGGCCGCAAAACCA +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEISCGAP*PGAAKP
Trigger: TGGTTTTGCGGCCCCGGGGCAAGGAGCGCCACAAGA...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCGCGCCTGCTCTGTCTaGCTCTGGCAGTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQRACSV*LWQFHG
Trigger: ACCGTGGAACTGCCAGAGGCAGACAGAGCAGGCGCG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGATGCTGTTTTAGATCCTaGCAGCTTAGACTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRCCFRS*QLRLGK
Trigger: CTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCA...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCACTGGCTCTCACGCTaGAGGTCCCTCGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQHWLSR*RSLDRG
Trigger: GCCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCCACAGCACCACTGCTaGCTTGGCAGCGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQPQHHC*LGSEKG
Trigger: GCCCTTCTCGCTGCCAAGGCAGCAGTGGTGCTGTGG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACGAAACATTTCCTATTaGAGAGATTCAGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPRNISY*RDSEVL
Trigger: AAGAACTTCTGAATCTCTGCAATAGGAAATGTTTCG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGCTGGGAAAGCACTTaGATGATCGAAACATTTCCT +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRGWEST*MIETFP
Trigger: AGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCC...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTTCATTTCATCAGTCTTaGTTCCCAGAGGACCCAGAT +
Preference number: 4 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVSFHQS*FPEDPD
Trigger: ATCTGGGTCCTCTGGGAAGCAAGACTGATGAAATGA...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCGACTGGCTCTTCCTGTaGGTCGAGACTCTGTCATGT +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPDWLFL*VETLSC
Trigger: ACATGACAGAGTCTCGACGCACAGGAAGAGCCAGTC...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCTTGCTGCACCTCTCTaGATAGGGGCCGAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPILAAPL*IGAEVA
Trigger: AGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGACCGCGCAGATGCCACTaGCTCTCACGCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRPRRCH*LSRCRS
Trigger: GGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGG...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGACGGCTCCTGCGGAACTaGGCGCAGCCTGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRRLLRN*AQPVCA
Trigger: AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCG...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCCTGTCCAGAACTCTTaGAGGCCGGGCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIPVQNS*RPGQQP
Trigger: TGGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCCTCCACCGAGCATCTaGGCAGTGTCTGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDPPPSI*AVSASC
Trigger: ACAGGAGGCAGACACTGCCCAGATGCTCGGTGGAGG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGATTGGGAATACTGCAGTaGCTTCTGAAAAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRLGILQ*LLKSVH
Trigger: ATGGACACTTTTCAGAAGTCACTGCAGTATTCCCAA...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCCGCTCCACAGGAAGTaGGGATACAGCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDPLHRK*GYSKSQ
Trigger: CTGGCTCTTGCTGTATCCTCACTTCCTGTGGAGCGG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGACTCTCAGCACAGGCCTaGCGACCGCCCAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRLSAQA*RPPSFR
Trigger: TCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAG...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCCTGGAACATTGTaGGTTACATTGCATATAGTG +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRGPGTL*VTLHIV
Trigger: CACTATATGCAATGTAACTCACAATGTTCCAGGACC...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGAAGCTGTACACGGTTTaGTCATGTAAAACCGTTTGG +
Preference number: 4 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVKLYTV*SCKTVW
Trigger: CCAAACGGTTTTACATGATCAAACCGTGTACAGCTT...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGATGGGAGGTGTCCATaGAGTAACTTTCATGTAGAA +
Preference number: 4 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRDGRCP*SNFHVE
Trigger: TTCTACATGAAAGTTACTGCATGGACACCTCCCATC...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACTTCATTACATTTTCCTaGTTGGCTCCCCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNFITFS*LAPLGA
Trigger: GGCACCCAGGGGAGCCAAGCAGGAAAATGTAATGAA...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACTCGGCCTCCAGTAACTaGTTCTCACAGGAAATACGC +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNSASSN*FSQEIR
Trigger: GCGTATTTCCTGTGAGAAGCAGTTACTGGAGGCCGA...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTAAACTTTCTTCACTTTaGTGTGCAAGAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCKLSSL*CARRHC
Trigger: GCAGTGTCTTCTTGCACAGCAAAGTGAAGAAAGTTT...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCGAGCACGTCCAACTTaGGGGTCCTCACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQRARPT*GSSQCC
Trigger: GCAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCAGCCTGTGTGTGCTTaGCCTGGGAGATGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIQPVCA*PGRCLC
Trigger: ACACAGGCATCTCCCAGGCCAAGCACACACAGGCTG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGGCAGCGAGAAGGGCTaGGAAAACTGCAAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIGSEKG*ENCKPL
Trigger: AAGGGGCTTGCAGTTTTCCCAGCCCTTCTCGCTGCC...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGAGCACCACTGCTGCCTTaGCAGCGAGAAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRAPLLP*QREGLG
Trigger: TCCCAGCCCTTCTCGCTGCCAAGGCAGCAGTGGTGC...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTATAGTGAGGCCTCAGTaGCAGGCACTCATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIIVRPQ*QALILP
Trigger: GGGGAGGATGAGTGCCTGTCACTGAGGCCTCACTAT...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTTTTGAAAGCTGGTTaGGTCCTGTGGCTAAAAATA +
Preference number: 4 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVVLKAG*VLWLKI
Trigger: TATTTTTAGCCACAGGACTCAACCAGCTTTCAAAAC...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTACTGAACTGGCTGTCTaGAGAAGTGACGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPITELAV*RSDGWH
Trigger: GTGCCAGCCGTCACTTCTGCAGACAGCCAGTTCAGT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATACTGAACTGGCTGTCTaGAGAAGTGACGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDTELAV*RSDGWH
Trigger: GTGCCAGCCGTCACTTCTGCAGACAGCCAGTTCAGT...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCGAAACATTTCCTATTaGAGAGATTCAGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGRNISY*RDSEVL
Trigger: AAGAACTTCTGAATCTCTGCAATAGGAAATGTTTCG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACTGTTCTCTCCTGATGTaGCTTCTAAGCCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNCSLLM*LLSQLL
Trigger: TAGGAGCTGGCTTAGAAGGCACATCAGGAGAGAACA...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp TCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGAGCAGAAGACAGATGTaGTGGCATGAATTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: SFLSTLMATPPRVEVTVVSRRQM*WHELSF
Trigger: AAAACTCAATTCATGCCAGCACATCTGTCTTCTGCT...CACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGTTCCACGGTCACTGTaGTCTCGGAAGACGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIVPRSL*SRKTGS
Trigger: TGAGCCCGTCTTCCGAGACCACAGTGACCGTGGAAC...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGCTCTGTCTGCCTCTaGCAGTTCCACGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDCSVCL*QFHGHC
Trigger: ACAGTGACCGTGGAACTGCCAGAGGCAGACAGAGCA...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGCGGCCTTCTCACTCTaGAGCTCCGAAGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIAAFSL*SSEELS
Trigger: GCTCAGTTCTTCGGAGCTCCAGAGTGAGAAGGCCGC...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTATCAAGTCTTTGGTCCTaGAACATTGTGAGTTACATT +
Preference number: 4 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLSSLWS*NIVSYI
Trigger: AATGTAACTCACAATGTTCCAGGACCAAAGACTTGA...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACCCAAATGCACATAGCTaGGGTGTAAAGCTTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNPNAHS*GVKLWC
Trigger: GCACCAAAGCTTTACACCCCAGCTATGTGCATTTGG...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp TGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCATTCTGTCATGTTTGCCTaGGGACACAAGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: CTQVVPIKTPSFEPNYVHSVMFA*GHKALA
Trigger: AGCCAGCGCCTTGTGTCCCCAGGCAAACATGACAGA...ATGGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCTAGGACATCGCCAGTaGCAGCTGAGGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQLGHRQ*QLRHIN
Trigger: GTTGATGTGCCTCAGCTGTCACTGGCGATGTCCTAG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCTTTCTTACAGATGCATaGTGGGCCTGCTTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPFLTDA*WACFLA
Trigger: AGCTAGAAAGCAGGCCCATCATGCATCTGTAAGAAA...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGCTTTGTTGCCATCCTTaGGATGAACCTTTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVLCCHP*DEPFKK
Trigger: TTTCTTAAAAGGTTCATCTCAAGGATGGCAACAAAG...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGCTAGTCTGGGGGCTTaGCCTGGAACTGTACCCATT +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIASLGA*PGTVPI
Trigger: AATGGGTACAGTTCCAGGGCAAGCCCCCAGACTAGC...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCATGCCCAGGGCCAGTaGAATTGGGAATACTGCAGT +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDHAQGQ*NWEYCS
Trigger: ACTGCAGTATTCCCAATTGCACTGGCCCTGGGCATG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTAAATGGCTCTCTTGCTaGACCTCTCTGGATAGGGGC +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIKWLSC*TSLDRG
Trigger: GCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGGGAAATGGCTCTCTTaGTGCACCTCTCTGGATAGG +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIGKWLS*CTSLDR
Trigger: CCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCC...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTTGGGGGTCCTCACAGTaGTGCTATGAACTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIWGSSQ*CYELAS
Trigger: ACTGGCCAGTTCATAGCAGCACTGTGAGGACCCCCA...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCCCACACACAACAGCTaGGCCTTGGAAGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQPTHNS*ALEGLG
Trigger: ACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTTGCTCTGTCTGCCTCTaGCAGTTCCACGGTCACTGT +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEICSVCL*QFHGHC
Trigger: ACAGTGACCGTGGAACTGCCAGAGGCAGACAGAGCA...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTTCCAAGGAGGACAAGTaGGAGAATCCAGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPISKEDK*ENPESH
Trigger: GTGGCTCTCTGGATTCTCCCACTTGTCCTCCTTGGA...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCCAAGGAGGACAAGTaGGAGAATCCAGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDSKEDK*ENPESH
Trigger: GTGGCTCTCTGGATTCTCCCACTTGTCCTCCTTGGA...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCTGGGGTGTAAAGCTTTaGTGCTCCTCATTTCATCAG +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPWGVKL*CSSFHQ
Trigger: CTGATGAAATGAGGAGCACCAAAGCTTTACACCCCA...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACGCAGGTTTTGAAAGCTaGTTGAGTCCTGTGGCTAAA +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNAGFES*LSPVAK
Trigger: TTTAGCCACAGGACTCAACCAGCTTTCAAAACCTGC...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGGCTATCATTAGATTCTaGGTCTCTTTAAAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVAIIRF*VSLKSR
Trigger: CCTAGACTTTAAAGAGACCCAGAATCTAATGATAGC...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp TGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCTTTGGCGGCACAAGCTaGACTTTGTTGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: CVHRWSQSKLHLLSPIMSFGGTS*TLLPSL
Trigger: CAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAA...GGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATACAGCATTCCACCACTaGATGCCACAATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDTAFHH*MPQSAP
Trigger: TGGTGCAGATTGTGGCATTCAGTGGTGGAATGCTGT...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCACAGATGTGCTGGCATaGATTGAGTTTTCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPTDVLA*IEFSEC
Trigger: ACACTCTGAAAACTCAATTCATGCCAGCACATCTGT...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp TGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCATCTTCTTTCTCTGGGTTaGGACAGGGTCAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: CTQVVPIKTPSFEPNYVHLLSLG*DRVKET
Trigger: GGTTTCCTTGACCCTGTCTCAACCCAGAGAAAGAAG...ATGGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGTGTTTGCAGCCATACTaGAGCGCCAGCTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQCLQPY*SASLLR
Trigger: CCTCAACAAGCTGGCGCTGCAGTATGGCTGCAAACA...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000344791.6
CDS-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGAAATGGCTCTCTTGCTaGACCTCTCTGGATAGGGGC +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQKWLSC*TSLDRG
Trigger: GCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTT...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCCCTTTATTCAACAGTaGCGCAGTTTGGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIPFIQQ*RSLGPG
Trigger: CCCTGGACCCAAACTGCGGCACTGTTGAATAAAGGG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGAGCTTGGCCTGGGAGATaGCTGTGTGTCACACTAAGC +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRAWPGR*LCVTLS
Trigger: GCTTAGTGTGACACACAGGCATCTCCCAGGCCAAGC...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCGGTGTAAAGCTTTGGTaGTCCTCATTTCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPGVKLW*SSFHQS
Trigger: AGACTGATGAAATGAGGAGCACCAAAGCTTTACACC...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGTACTCTAATCACAGCTaGAGCTACTTAAAGTCAATT +
Preference number: 4 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVYSNHS*SYLKSI
Trigger: AATTGACTTTAAGTAGCTGCAGCTGTGATTAGAGTA...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp TGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCAATCTGGCTGTTGCATaGACAGTGCTGTGGATGAGT +
Preference number: 4 (lower is better)
Translates to: CVHRWSQSKLHLLSPIMSNLAVA*TVLWMS
Trigger: ACTCATCCACAGCACTGTGCATGCAACAGCCAGATT...GGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACTTCTTCACTTTGCTGTaGAAGAAGACACTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNFFTLL*KKTLLC
Trigger: GCAAAGCAGTGTCTTCTTGCACAGCAAAGTGAAGAA...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATGGCCTTGGAAGGTCTTaGTTAACAATTCCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDGLGRS*LTIPRA
Trigger: GGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCC...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTACATGTATACGTGGCTaGTCGGAGTCCCACACACAA +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPITCIRG*SESHTQ
Trigger: TTGTGTGTGGGACTCCGACCAGCCACGTATACATGT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACTTGTGTGTACACAGGTaGTCCCAATCAAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNLCVHR*SQSKLH
Trigger: ATGGAGTTTTGATTGGGACCACCTGTGTACACACAA...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCGCAAAACCACACGGTaGGACTCTTCTTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQRKTTR*DSSSEE
Trigger: CTCTTCTGAAGAAGAGTCTCACCGTGTGGTTTTGCG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR TCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCGCAAAACCACACGGTaGGACTCTTCTTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIRKTTR*DSSSEE
Trigger: CTCTTCTGAAGAAGAGTCTCACCGTGTGGTTTTGCG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR TCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTACAGCATTCCACCACTaGATGCCACAATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEITAFHH*MPQSAP
Trigger: TGGTGCAGATTGTGGCATTCAGTGGTGGAATGCTGT...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGAATCGCCAGTGACAGCTaGGGCACATCAACAGCCAAT +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRIASDS*GTSTAN
Trigger: ATTGGCTGTTGATGTGCCTCAGCTGTCACTGGCGAT...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCTGAGGGGGCCAATATaGAGTAGGCTTGTTACAACT +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDLRGPI*SRLVTT
Trigger: AGTTGTAACAAGCCTACTTCATATTGGCCCCCTCAG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCTGAGGGGGCCAATATaGAGTAGGCTTGTTACAACT +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPILRGPI*SRLVTT
Trigger: AGTTGTAACAAGCCTACTTCATATTGGCCCCCTCAG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCTCCCTCAGGTGTTCTaGTCGCCTTTTACAACAAGG +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEILPQVF*SPFTTR
Trigger: CCTTGTTGTAAAAGGCGATCAGAACACCTGAGGGAG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGATGTTTGCAGCCATACTaGAGCGCCAGCTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRCLQPY*SASLLR
Trigger: CCTCAACAAGCTGGCGCTGCAGTATGGCTGCAAACA...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000344791.6
CDS-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATCTGAATGCCACAATCTaGACCATCCATAGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDLNATI*TIHRRL
Trigger: AAGACGCCTATGGATGGTGCAGATTGTGGCATTCAG...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCATTCCACCACTGAATaGCACAATCTGCACCATCCA +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIHSTTE*HNLHHP
Trigger: TGGATGGTGCAGATTGTGGCATTCAGTGGTGGAATG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGACATCTGGGCAGTGTCTaGCTCCTGTCCAGAACTCTT +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRHLGSV*LLSRTL
Trigger: AAGAGTTCTGGACAGGAGGCAGACACTGCCCAGATG...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp TGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCAAGACCTTTTTCACCTaGAGGCTTCTTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CVHRWSQSKLHLLSPIMSKTFFT*RLLSLG
Trigger: ACCCAGAGAAAGAAGCCTGCAGGTGAAAAAGGTCTT...GGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCAGGGCCAGTGCAATTaGGAATACTGCAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQQGQCN*EYCSDF
Trigger: GAAGTCACTGCAGTATTCCCAATTGCACTGGCCCTG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTAACAGTGCCGCAGTTTaGGTCCAGGGCTTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEINSAAV*VQGFFN
Trigger: GTTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTT...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TGTAAAACCGTTTGGCGGCACAAGCTGGACTTTGTTGCCATCCTTGAGATGAACAGAAGACAGATGTGCTaGCATGAATTGAGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: CKTVWRHKLDFVAILEMNRRQMC*HELSFQ
Trigger: CTGAAAACTCAATTCATGCCAGCACATCTGTCTTCT...GTTCATCTCAAGGATGGCAACAAAGTCCAGCTTGTGCCGCCAAACGGTTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp TGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCTGTGCTGGCATGAATTaGGTTTTCAGAGTGTTAGGT +
Preference number: 4 (lower is better)
Translates to: CVHRWSQSKLHLLSPIMSCAGMN*VFRVLG
Trigger: ACCTAACACTCTGAAAACTCAATTCATGCCAGCACA...GGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGTCCGGAATTAAATTCTaGCTGGTATCTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQSGIKF*LVSPAP
Trigger: TGGGGCTGGAGATACCAGGCAGAATTTAATTCCGGA...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344791.6
CDS-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTCTGAATGCCACAATCTaGACCATCCATAGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEILNATI*TIHRRL
Trigger: AAGACGCCTATGGATGGTGCAGATTGTGGCATTCAG...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGCTGTTTTAGATCCTaGCAGCTTAGACTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDCCFRS*QLRLGK
Trigger: CTTACCCAGTCTAAGCTGGCAGGATCTAAAACAGCA...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGGCTGGGAAAGCACTTaGATGATCGAAACATTTCCT +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIGWEST*MIETFP
Trigger: AGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCC...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGATCACTCTGAATGTTTaGAGCCATACTGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQITLNV*SHTAAP
Trigger: TGGCGCTGCAGTATGGCTGCAAACATTCAGAGTGAT...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332728.8
CDS-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTACAACAGCTGGGCCTTaGAAGGTCTTGGTTAACAAT +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPITTAGP*KVLVNN
Trigger: ATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGGTTTCAGTTCTTTGTaGGTCTCCATCAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIGFSSL*VSIRIP
Trigger: TGGGATCCTGATGGAGACCCACAAAGAACTGAAACC...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCACGCTCAATATCCTaGTCAATCCCCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIARSIS*SIPLKK
Trigger: CTTCTTTAAGGGGATTGACCAGGATATTGAGCGTGC...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCATTCATGTAAAACCGTTTaGCGGCACAAGCTGGACTTT +
Preference number: 4 (lower is better)
Translates to: CTQVVPIKTPSFEPNYVHSCKTV*RHKLDF
Trigger: AAAGTCCAGCTTGTGCCGCCAAACGGTTTTACATGA...ATGGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR TCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTTTGGGAATACTGCAGTaGCTTCTGAAAAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPILGILQ*LLKSVH
Trigger: ATGGACACTTTTCAGAAGTCACTGCAGTATTCCCAA...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATGGTCCTGGAACATTGTaGGTTACATTGCATATAGTG +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDGPGTL*VTLHIV
Trigger: CACTATATGCAATGTAACTCACAATGTTCCAGGACC...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATGGGAAAGCACTTGCATaGTCGAAACATTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDGKALA*SKHFLL
Trigger: CAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCC...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGATGGGAGGTGTCCATaGAGTAACTTTCATGTAGAA +
Preference number: 4 (lower is better)
Translates to: RAQTFGWESTCMIETFPIDGRCP*SNFHVE
Trigger: TTCTACATGAAAGTTACTGCATGGACACCTCCCATC...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGACATTCCACCACTGAATaGCACAATCTGCACCATCCA +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRHSTTE*HNLHHP
Trigger: TGGATGGTGCAGATTGTGGCATTCAGTGGTGGAATG...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGGCTGGGAAAGCACTTaGATGATCGAAACATTTCCT +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIGWEST*MIETFP
Trigger: AGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCC...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGACAACAGCTGGGCCTTaGAAGGTCTTGGTTAACAAT +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQTTAGP*KVLVNN
Trigger: ATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGT...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGATTAAACATGTATACGTaGCTGGTCGGAGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRLNMYT*LVGVPH
Trigger: GTGTGGGACTCCGACCAGCCACGTATACATGTTTAA...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGGCACGCTCAATATCCTaGTCAATCCCCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQARSIS*SIPLKK
Trigger: CTTCTTTAAGGGGATTGACCAGGATATTGAGCGTGC...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGAAATGTCACAGGGAAATaGCTCTCTTGCTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRNVTGK*LSCCTS
Trigger: AGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATT...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR TCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGGTCCTGGAACATTGTaGGTTACATTGCATATAGTG +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEIGPGTL*VTLHIV
Trigger: CACTATATGCAATGTAACTCACAATGTTCCAGGACC...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATGACTTTCTTGATATCTaGAACTTTGCAGCCATACTG +
Preference number: 4 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDDFLDI*NFAAIL
Trigger: CAGTATGGCTGCAAAGTTGCAGATATCAAGAAAGTC...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409796.5
CDS-3UTR TCA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGAGGGAAAGCACTTGCATaGTCGAAACATTTCCTATTG +
Preference number: 4 (lower is better)
Translates to: WNIVSYIAYSVILRASPRGKALA*SKHFLL
Trigger: CAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCC...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CCA 90 bp ACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTTCAAGTCTTTGGTCCTaGAACATTGTGAGTTACATT +
Preference number: 4 (lower is better)
Translates to: TFGWESTCMIETFPIAEISSLWS*NIVSYI
Trigger: AATGTAACTCACAATGTTCCAGGACCAAAGACTTGA...AATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR GCA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCGAAACATTTCCTATTaGAGAGATTCAGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQRNISY*RDSEVL
Trigger: AAGAACTTCTGAATCTCTGCAATAGGAAATGTTTCG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS GCA 90 bp GACCGGCGACCGGCGACTCGCGACCCGCGACCCGCGACCCGCAGCTaGCACCGCGCCTGCGGATTGGCTACGAACATCAGCAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: DRRPATRDPRPATRS*HRACGLATNISRAP
Trigger: GGGGGCCCTGCTGATGTTCGTAGCCAATCCGCAGGCGCGGTGGCAGCTGCGGGTCGCGGGTCGCGGGTCGCGAGTCGCCGGTCGCCGGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484050.1
CDS CCA 90 bp TGGGCCAGCTCCCGCTGCAGCAGCACCACGTCACCTGCTCCCGCCTaGGGAGGCTGGTGGACACCGCTCTTGTGGCGCTCCTTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: WASSRCSSTTSPAPA*GGWWTPLLWRSLPR
Trigger: CCGGGGCAAGGAGCGCCACAAGAGCGGTGTCCACCAGCCTCCCCAGGCGGGAGCAGGTGACGTGGTGCTGCTGCAGCGGGAGCTGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000450512.1
ENST00000479791.1
ENST00000493256.1
ENST00000684762.1
CDS CCA 90 bp CGCCCCCACTGGCCTCCCCCTTGTCGGCTCCCGGGTCATCCCTGCTaGGCAGCCCTGGAGCCCATAGGAAGCAGTGGGCCACGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: RPHWPPPCRLPGHPC*AALEPIGSSGPRSP
Trigger: GGGACTGCGTGGCCCACTGCTTCCTATGGGCTCCAGGGCTGCCCAGCAGGGATGACCCGGGAGCCGACAAGGGGGAGGCCAGTGGGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 90 bp GCGGGACTGGGGAGGCAGCCAATGAAGTCAGCGCTGGGCGGGCACTaGAGCGAGCCTGGCTGCGCGGAGAGCTCATCCCGGGACCACAGG +
Preference number: 5 (lower is better)
Translates to: AGLGRQPMKSALGGH*SEPGCAESSSRDHR
Trigger: CCTGTGGTCCCGGGATGAGCTCTCCGCGCAGCCAGGCTCGCTCCAGTGCCCGCCCAGCGCTGACTTCATTGGCTGCCTCCCCAGTCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484050.1
CDS GCA 90 bp CAACGCCCCCACTGGCCTCCCCCTTGTCGGCTCCCGGGTCATCCCTaGTGGGCAGCCCTGGAGCCCATAGGAAGCAGTGGGCCACGCAGT +
Preference number: 5 (lower is better)
Translates to: QRPHWPPPCRLPGHP*WAALEPIGSSGPRS
Trigger: ACTGCGTGGCCCACTGCTTCCTATGGGCTCCAGGGCTGCCCAGCAGGGATGACCCGGGAGCCGACAAGGGGGAGGCCAGTGGGGGCGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS-3UTR CAA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCATGGTGGACACCGCTCTaGTGGCGCTCCTTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASWWTPL*WRSLPR
Trigger: CCGGGGCAAGGAGCGCCACAAGAGCGGTGTCCACCA...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS GCA 90 bp CATCAGTTGGCCGGCCTGGGCACCGGTGCCCGCGCCTGCTCTGTCTaGCTCTGGCAGTTCCACGGTCACTGTGGTCTCGGAAGACGGGCT +
Preference number: 5 (lower is better)
Translates to: HQLAGLGTGARACSV*LWQFHGHCGLGRRA
Trigger: AGCCCGTCTTCCGAGACCACAGTGACCGTGGAACTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000484050.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS CCA 90 bp TTGGCCGGCCTGGGCACCGGTGCCCGCGCCTGCTCTGTCTGCCTCTaGCAGTTCCACGGTCACTGTGGTCTCGGAAGACGGGCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: LAGLGTGARACSVCL*QFHGHCGLGRRAQK
Trigger: CTTCTGAGCCCGTCTTCCGAGACCACAGTGACCGTGGAACTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000484050.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS CCA 90 bp CTCTGGGTTGAGACAGGGTCAAGGAAACCGTCCCAACGCCCCCACTaGCCTCCCCCTTGTCGGCTCCCGGGTCATCCCTGCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LWVETGSRKPSQRPH*PPPCRLPGHPCWAA
Trigger: GGCTGCCCAGCAGGGATGACCCGGGAGCCGACAAGGGGGAGGCCAGTGGGGGCGTTGGGACGGTTTCCTTGACCCTGTCTCAACCCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS-3UTR CAA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTAGCACCACTGCTGCCTaGGCAGCGAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCASTTAA*AARRAG
Trigger: CCCAGCCCTTCTCGCTGCCAAGGCAGCAGTGGTGCT...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS CCA 90 bp CCCGGGTCATCCCTGCTGGGCAGCCCTGGAGCCCATAGGAAGCAGTaGGCCACGCAGTCCCACCGGGGCCTAATCTGGCTGTTGCATGCA +
Preference number: 5 (lower is better)
Translates to: PGSSLLGSPGAHRKQ*ATQSHRGLIWLLHA
Trigger: TGCATGCAACAGCCAGATTAGGCCCCGGTGGGACTGCGTGGCCCACTGCTTCCTATGGGCTCCAGGGCTGCCCAGCAGGGATGACCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS-3UTR CAA 90 bp GGTGTGCACAGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGCAGCCTGTGTGTGCTaGGCCTGGGAGATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: GVHRGCGSQHRPDDRPASAACVC*AWEMPV
Trigger: CACAGGCATCTCCCAGGCCAAGCACACACAGGCTGC...TGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCTGTGCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS GCA 90 bp AAAGAAGCCCATCAGTTGGCCGGCCTGGGCACCGGTGCCCGCGCCTaGTCTGTCTGCCTCTGGCAGTTCCACGGTCACTGTGGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: KEAHQLAGLGTGARA*SVCLWQFHGHCGLG
Trigger: TCCGAGACCACAGTGACCGTGGAACTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000484050.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS-3UTR CAA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGAAAGAAGCCCATCAGTaGGCCGGCCTGGGCACCGGT +
Preference number: 5 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRKEAHQ*AGLGTG
Trigger: ACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTT...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS CCA 90 bp GACGGACTGGCTCTTCCTGTGCGTCGAGACTCTGTCATGTTTGCCTaGGGACACAAGGCGCTGGCTTTGCCACCAGGCAGCCCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: DGLALPVRRDSVMFA*GHKALALPPGSPFP
Trigger: GGGGAAGGGGCTGCCTGGTGGCAAAGCCAGCGCCTTGTGTCCCCAGGCAAACATGACAGAGTCTCGACGCACAGGAAGAGCCAGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS-3UTR CAA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGAAAGAAGCCCATCAGTaGGCCGGCCTGGGCACCGGT +
Preference number: 5 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQKEAHQ*AGLGTG
Trigger: ACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTT...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTCTGGAACTGTACCCATaGCCATCGAGCCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCALELYP*PSSHWG
Trigger: TCCCCAATGGCTCGATGGCAATGGGTACAGTTCCAG...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCTGGAACTGTACCCATaGCCATCGAGCCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: RGCGSQHRPDDRPASDANLELYP*PSSHWG
Trigger: TCCCCAATGGCTCGATGGCAATGGGTACAGTTCCAG...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCATCCTGTCCAGAACTCTaGGAGGCCGGGCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPSCPEL*EAGPAA
Trigger: GGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGGA...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS GCA 90 bp CCTGTGCCAGCTGATTGGCTGCAGCCTGCTCGGTCGGTCGTCCGGTaGTCACAAGCAGCCCGAGGACCACTCGGTTGTAAAACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: PVPADWLQPARSVVR*SQAARGPLGCKTER
Trigger: CCTCTCAGTTTTACAACCGAGTGGTCCTCGGGCTGCTTGTGAGCACCGGACGACCGACCGAGCAGGCTGCAGCCAATCAGCTGGCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 90 bp ATATCCTGGTCAATCCCCTTAAAGAAGCCCATCAGTTGGCCGGCCTaGGCACCGGTGCCCGCGCCTGCTCTGTCTGCCTCTGGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: ISWSIPLKKPISWPA*APVPAPALSASGSS
Trigger: GGAACTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTTAAGGGGATTGACCAGGATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS CCA 90 bp GCACGCTCAATATCCTGGTCAATCCCCTTAAAGAAGCCCATCAGTTaGCCGGCCTGGGCACCGGTGCCCGCGCCTGCTCTGTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: ARSISWSIPLKKPIS*PAWAPVPAPALSAS
Trigger: AGAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTTAAGGGGATTGACCAGGATATTGAGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS CCA 90 bp GCACCAGCCAAGATGATTTTCAGTCGGAGCCCTGTGCCAGCTGATTaGCTGCAGCCTGCTCGGTCGGTCGTCCGGTGCTCACAAGCAGCC +
Preference number: 5 (lower is better)
Translates to: APAKMIFSRSPVPAD*LQPARSVVRCSQAA
Trigger: GGCTGCTTGTGAGCACCGGACGACCGACCGAGCAGGCTGCAGCCAATCAGCTGGCACAGGGCTCCGACTGAAAATCATCTTGGCTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS-3UTR CAA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAGCAGCCTGTGTGTGCTaGGCCTGGGAGATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPAACVC*AWEMPV
Trigger: CACAGGCATCTCCCAGGCCAAGCACACACAGGCTGC...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACAGGGGTTTCAGTTCTTaGTGGGTCTCCATCAGGATC +
Preference number: 5 (lower is better)
Translates to: RGCGSQHRPDDRPASDANRGFSS*WVSIRI
Trigger: GATCCTGATGGAGACCCACAAAGAACTGAAACCCCT...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGGCAAGCCGCGCAGATGCCACTGGCTCTCACGCTGCAGGTCCCTCGACAGAGGCAACAGTGCCGCAGTTaGGGTCCAGGGCTTTTTCAA +
Preference number: 5 (lower is better)
Translates to: RQAAQMPLALTLQVPRQRQQCRS*GPGLFQ
Trigger: TTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTTG...CCTCTGTCGAGGGACCTGCAGCGTGAGAGCCAGTGGCATCTGCGCGGCTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCAGCACCACTGCTGCCTaGGCAGCGAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVSTTAA*AARRAG
Trigger: CCCAGCCCTTCTCGCTGCCAAGGCAGCAGTGGTGCT...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTTCCTGTCCAGAACTCTaGGAGGCCGGGCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGSCPEL*EAGPAA
Trigger: GGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGGA...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTAATCACTCTGAATGTTaGCAGCCATACTGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCANHSEC*QPYCSA
Trigger: GGCGCTGCAGTATGGCTGCAAACATTCAGAGTGATT...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332728.8
CDS GCA 90 bp GCAGTGGGCCACGCAGTCCCACCGGGGCCTAATCTGGCTGTTGCATaGACAGTGCTGTGGATGAGTGGAATCCATTCGGCCTCCAGTAAC +
Preference number: 5 (lower is better)
Translates to: AVGHAVPPGPNLAVA*TVLWMSGIHSASSN
Trigger: GTTACTGGAGGCCGAATGGATTCCACTCATCCACAGCACTGTGCATGCAACAGCCAGATTAGGCCCCGGTGGGACTGCGTGGCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 90 bp CCCATCTTCCACGGGGCCAGGAGGTTTCAGACGTTCCAGGTCAAGTaGGCTTGTGTCCTCATCCCGCAGAAAGTTGCTGAGCCCCGTCTG +
Preference number: 5 (lower is better)
Translates to: PIFHGARRFQTFQVK*ACVLIPQKVAEPRL
Trigger: CAGACGGGGCTCAGCAACTTTCTGCGGGATGAGGACACAAGCCCACTTGACCTGGAACGTCTGAAACCTCCTGGCCCCGTGGAAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS-3UTR CAA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGATGGTGGACACCGCTCTaGTGGCGCTCCTTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRWWTPL*WRSLPR
Trigger: CCGGGGCAAGGAGCGCCACAAGAGCGGTGTCCACCA...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS GCA 90 bp CACACAACAGCTGGGCCTTGGAAGGTCTTGGTTAACAATTCCTCGTaGCTCATTTTCTTCACTCAGCGCCCAGGCTCCGCCGCGACCGGC +
Preference number: 5 (lower is better)
Translates to: HTTAGPWKVLVNNSS*LIFFTQRPGSAATG
Trigger: GCCGGTCGCGGCGGAGCCTGGGCGCTGAGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450512.1
ENST00000684762.1
CDS-3UTR CAA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGGGGCCTTGGAAGGTCTaGGTTAACAATTCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQGPWKV*VNNSSC
Trigger: GCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCC...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CAA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACCGAGCACGTCCAACTaGGGGGTCCTCACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLPSTSN*GVLTVL
Trigger: CAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCGG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCTGACAAAAGTGATTTaGTCATGGAACTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: RGCGSQHRPDDRPASDANLTKVI*SWNSKA
Trigger: GGCCTTGGAGTTCCATGACAAAATCACTTTTGTCAG...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTCACAAGGCGCTGGCTTaGCCACCAGGCAGCCCCTTC +
Preference number: 5 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVHKALA*PPGSPF
Trigger: GAAGGGGCTGCCTGGTGGCAAAGCCAGCGCCTTGTG...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS GCA 90 bp TCTGCAGAAGTGACGGCTGGCACTGCAACTGCTAGTCTGGGGGCTTaGCCTGGAACTGTACCCATTGCCATCGAGCCATTGGGGATGACA +
Preference number: 5 (lower is better)
Translates to: SAEVTAGTATASLGA*PGTVPIAIEPLGMT
Trigger: TGTCATCCCCAATGGCTCGATGGCAATGGGTACAGTTCCAGGGCAAGCCCCCAGACTAGCAGTTGCAGTGCCAGCCGTCACTTCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000545021.2
ENST00000684762.1
CDS GCA 90 bp TTGTCTCCCGCACTCACTCCAGTAAAGACGGACTGGCTCTTCCTGTaGGTCGAGACTCTGTCATGTTTGCCTGGGGACACAAGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LSPALTPVKTDWLFL*VETLSCLPGDTRRW
Trigger: CCAGCGCCTTGTGTCCCCAGGCAAACATGACAGAGTCTCGACGCACAGGAAGAGCCAGTCCGTCTTTACTGGAGTGAGTGCGGGAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS-3UTR CAA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGATTGCCATCGAGCCATaGGGGATGACAGTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQIAIEP*GMTVVF
Trigger: GAACACAACTGTCATCCCCAATGGCTCGATGGCAAT...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACCGAGCACGTCCAACTaGGGGGTCCTCACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRPSTSN*GVLTVL
Trigger: CAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCGG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS CCA 90 bp GAAGAGTCCCCCGAGTCCCCACTGCCATTCTTAAACATGTATACGTaGCTGGTCGGAGTCCCACACACAACAGCTGGGCCTTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: EESPESPLPFLNMYT*LVGVPHTTAGPWKV
Trigger: GACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCCACGTATACATGTTTAAGAATGGCAGTGGGGACTCGGGGGACTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000450512.1
ENST00000479791.1
ENST00000493256.1
ENST00000684762.1
CDS-3UTR CAA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTTCTGCAACTTTGCCATaGTTAATCACTCTGAATGCA +
Preference number: 5 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCASATLP*LITLNA
Trigger: TGCATTCAGAGTGATTAACAATGGCAAAGTTGCAGA...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344791.6
CDS-3UTR CAA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCAAGGGGTTTCAGTTCTTaGTGGGTCTCCATCAGGATC +
Preference number: 5 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPRGFSS*WVSIRI
Trigger: GATCCTGATGGAGACCCACAAAGAACTGAAACCCCT...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GAGAGCCACGCTGTGGGACGGCTCCTGCGGAACTGGGCGCAGCCTGTGTGTGCTGGTCTCACCACTAGCTaGTATTTTAAAGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: ESHAVGRLLRNWAQPVCAGLTTS*YFKVDQ
Trigger: TTGGTCTACTTTAAAATACAAGCTAGTGGTGAGACC...AGCACACACAGGCTGCGCCCAGTTCCGCAGGAGCCGTCCCACAGCGTGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCCTGGAACTGTACCCATaGCCATCGAGCCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVLELYP*PSSHWG
Trigger: TCCCCAATGGCTCGATGGCAATGGGTACAGTTCCAG...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTCATCCCGCAGAAAGTaGCTGAGCCCCGTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCSSRRK*LSPVCE
Trigger: CTCACAGACGGGGCTCAGCAACTTTCTGCGGGATGA...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS TCA 90 bp AGGCAGTATCCTGTTTTCAGGCCGATTCTGTGGCACCAGCCAAGATaGTTTTCAGTCGGAGCCCTGTGCCAGCTGATTGGCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: RQYPVFRPILWHQPR*FSVGALCQLIGCSL
Trigger: CAGGCTGCAGCCAATCAGCTGGCACAGGGCTCCGACTGAAAATCATCTTGGCTGGTGCCACAGAATCGGCCTGAAAACAGGATACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS GCA 90 bp CAGCAGCATGATGAAAACAGCATTCCACCACTGAATGCCACAATCTaGACCATCCATAGGCGTCTTCGGAGGTGCCGGGAGCAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: QQHDENSIPPLNATI*TIHRRLRRCREQWL
Trigger: CAGCCACTGCTCCCGGCACCTCCGAAGACGCCTATGGATGGTGCAGATTGTGGCATTCAGTGGTGGAATGCTGTTTTCATCATGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000545021.2
ENST00000684762.1
CDS CCA 90 bp GGCTGGTCGGAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTTaGTTAACAATTCCTCGTGCCTCATTTTCTTCACGCCATGAGCCC +
Preference number: 5 (lower is better)
Translates to: GWSESHTQQLGLGRS*LTIPRASFSSRHEP
Trigger: GGGCTCATGGCGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409796.5
ENST00000493256.1
CDS CCA 90 bp GGCTGGTCGGAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTTaGTTAACAATTCCTCGTGCCTCATTTTCTTCACTCAGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: GWSESHTQQLGLGRS*LTIPRASFSSLSAQ
Trigger: CTGGGCGCTGAGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450512.1
ENST00000684762.1
CDS-3UTR CAA 90 bp AGGGGCTGCGGCTCTCAGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACAAGTTGTTGACTTTCTaGATATCTGCAACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: RGCGSQHRPDDRPASDANKLLTF*ISATLP
Trigger: TGGCAAAGTTGCAGATATCAAGAAAGTCAACAACTT...GTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCTGAGAGCCGCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000344791.6
CDS-3UTR CAA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTCAACAGTGCCGCAGTTaGGGTCCAGGGCTTTTTCAA +
Preference number: 5 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGQQCRS*GPGLFQ
Trigger: TTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTTG...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp TCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGCCCAGAGGACCCAGATaGACAGGGCATCTTACTCGG +
Preference number: 5 (lower is better)
Translates to: SFLSTLMATPPRVEVTVVPRGPR*TGHLTR
Trigger: CCGAGTAAGATGCCCTGTCAATCTGGGTCCTCTGGG...CACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS TCA 90 bp TCCCACCGGGGCCTAATCTGGCTGTTGCATGCACAGTGCTGTGGATaGGTGGAATCCATTCGGCCTCCAGTAACTGCTTCTCACAGGAAA +
Preference number: 5 (lower is better)
Translates to: SHRGLIWLLHAQCCG*VESIRPPVTASHRK
Trigger: TTTCCTGTGAGAAGCAGTTACTGGAGGCCGAATGGATTCCACTCATCCACAGCACTGTGCATGCAACAGCCAGATTAGGCCCCGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 90 bp GGCTGGTCGGAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTTaGTTAACAATTCCTCGTGCCTCATTTTCTTCACTGCAGGACCAC +
Preference number: 5 (lower is better)
Translates to: GWSESHTQQLGLGRS*LTIPRASFSSLQDH
Trigger: GTGGTCCTGCAGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000344791.6
CDS CCA 90 bp AGGACGAGCTCTTCCCAGGCAGCCCCAGCCCCAAATGCACATAGCTaGGGTGTAAAGCTTTGGTGCTCCTCATTTCATCAGTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: RTSSSQAAPAPNAHS*GVKLWCSSFHQSCF
Trigger: GAAGCAAGACTGATGAAATGAGGAGCACCAAAGCTTTACACCCCAGCTATGTGCATTTGGGGCTGGGGCTGCCTGGGAAGAGCTCGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 90 bp GGAGAAGTTCCCTGCAGAGAAAGAAATGCGCTAACCCTCCCTCTTTaGGGGCCAGGGTTGGGAACTAAAGGTACTCCCACCTGCATTCCA +
Preference number: 5 (lower is better)
Translates to: GEVPCRERNALTLPL*GPGLGTKGTPTCIP
Trigger: TGGAATGCAGGTGGGAGTACCTTTAGTTCCCAACCCTGGCCCCCAAAGAGGGAGGGTTAGCGCATTTCTTTCTCTGCAGGGAACTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479791.1
CDS-3UTR CAA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGGGCCTTGGAAGGTCTaGGTTAACAATTCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLGPWKV*VNNSSC
Trigger: GCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCC...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CAA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTATTGCCATCGAGCCATaGGGGATGACAGTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGIAIEP*GMTVVF
Trigger: GAACACAACTGTCATCCCCAATGGCTCGATGGCAAT...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACTGGAACTGTACCCATaGCCATCGAGCCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRLELYP*PSSHWG
Trigger: TCCCCAATGGCTCGATGGCAATGGGTACAGTTCCAG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCACTGACAAAAGTGATTTaGTCATGGAACTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPLTKVI*SWNSKA
Trigger: GGCCTTGGAGTTCCATGACAAAATCACTTTTGTCAG...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS GCA 90 bp TGCACAGTGCTGTGGATGAGTGGAATCCATTCGGCCTCCAGTAACTaGTTCTCACAGGAAATACGCCAAAGCCTGTTAGAGGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: CTVLWMSGIHSASSN*FSQEIRQSLLEGVG
Trigger: ACCCACCCCCTCTAACAGGCTTTGGCGTATTTCCTGTGAGAAGCAGTTACTGGAGGCCGAATGGATTCCACTCATCCACAGCACTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 90 bp GTTGTAAACTGTTTGTCTCCCGCACTCACTCCAGTAAAGACGGACTaGCTCTTCCTGTGCGTCGAGACTCTGTCATGTTTGCCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: VVNCLSPALTPVKTD*LFLCVETLSCLPGD
Trigger: GTCCCCAGGCAAACATGACAGAGTCTCGACGCACAGGAAGAGCCAGTCCGTCTTTACTGGAGTGAGTGCGGGAGACAAACAGTTTACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS-3UTR CAA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATTGGTGGACACCGCTCTaGTGGCGCTCCTTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDWWTPL*WRSLPR
Trigger: CCGGGGCAAGGAGCGCCACAAGAGCGGTGTCCACCA...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
CDS-3UTR CAA 90 bp AGCACAGGCCTGACGACCGCCCAGCTTCAGACGCCAACCATAGTGAGGCCTCAGGGTCTCACCACTAGCTaGTATTTTAAAGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: STGLTTAQLQTPTIVRPQGLTTS*YFKVDQ
Trigger: TTGGTCTACTTTAAAATACAAGCTAGTGGTGAGACC...CTGAGGCCTCACTATGGTTGGCGTCTGAAGCTGGGCGGTCGTCAGGCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTACACATCAACAGCCAATaGCTAAAGCTGGGCCTAGTC +
Preference number: 5 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLHINSQ*LKLGLV
Trigger: GACTAGGCCCAGCTTTAGCAATTGGCTGTTGATGTG...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACAACAGTGCCGCAGTTaGGGTCCAGGGCTTTTTCAA +
Preference number: 5 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRQQCRS*GPGLFQ
Trigger: TTGAAAAAGCCCTGGACCCAAACTGCGGCACTGTTG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCTGGCTGGGAAAGCACTaGCATGATCGAAACATTTCC +
Preference number: 5 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVWLGKH*HDRNIS
Trigger: GGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCA...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS TCA 90 bp CTTAGACGCCAGGGCCTACACTCCAGTCACTTTCTTACAGATGCATaGTGGGCCTGCTTTCTAGCTAACCAAAGCAAACGCAGCTCAGCG +
Preference number: 5 (lower is better)
Translates to: LRRQGLHSSHFLTDA*WACFLANQSKRSSA
Trigger: CGCTGAGCTGCGTTTGCTTTGGTTAGCTAGAAAGCAGGCCCATCATGCATCTGTAAGAAAGTGACTGGAGTGTAGGCCCTGGCGTCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496108.5
CDS GCA 90 bp GTCGAGGGACCTTGGTGCCCTTATCTAAGTCCAAGCCTTCTGTGTTaGATCCTGGGTCTCATCATCTCCTTCTCAAGGTCTTCGCTTCTG +
Preference number: 5 (lower is better)
Translates to: VEGPWCPYLSPSLLC*ILGLIISFSRSSLL
Trigger: CAGAAGCGAAGACCTTGAGAAGGAGATGATGAGACCCAGGATGCAACACAGAAGGCTTGGACTTAGATAAGGGCACCAAGGTCCCTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604213.1
CDS-3UTR CAA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAATTGCCATCGAGCCATaGGGGATGACAGTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRIAIEP*GMTVVF
Trigger: GAACACAACTGTCATCCCCAATGGCTCGATGGCAAT...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp ATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCCTGACAAAAGTGATTTaGTCATGGAACTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: MSQGNGSLAAPLWIGAEVLTKVI*SWNSKA
Trigger: GGCCTTGGAGTTCCATGACAAAATCACTTTTGTCAG...GACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGGCTTCTTTCTCTGGGTaGAGACAGGGTCAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVASFSG*RQGQGN
Trigger: GTTTCCTTGACCCTGTCTCAACCCAGAGAAAGAAGC...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CAA 90 bp GTCACTGTTGTGTGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCGAGACTCTGTCATGTTaGCCTGGGGACACAAGGCGC +
Preference number: 5 (lower is better)
Translates to: VTVVCTQVVPIKTPSFEPETLSC*PGDTRR
Trigger: GCGCCTTGTGTCCCCAGGCAAACATGACAGAGTCTC...GGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACACACAACAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CAA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGATTGATATCTGCAACTTaGCAGCCATACTGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRLISAT*QPYCSA
Trigger: GGCGCTGCAGTATGGCTGCAAAGTTGCAGATATCAA...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409796.5
CDS CCA 90 bp ATGTATACGTGGCTGGTCGGAGTCCCACACACAACAGCTGGGCCTTaGAAGGTCTTGGTTAACAATTCCTCGTGCCTCATTTTCTTCACG +
Preference number: 5 (lower is better)
Translates to: MYTWLVGVPHTTAGP*KVLVNNSSCLIFFT
Trigger: CGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCCACGTATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409796.5
ENST00000493256.1
CDS-3UTR CAA 90 bp AGCACCAACTCCCAAGTAGTAGCAGGCTCTGTCCCGCAGTCCCCAGCCCATCCATTGATATCTGCAACTTaGCCATTGTTAATCACTCTG +
Preference number: 5 (lower is better)
Translates to: STNSQVVAGSVPQSPAHPLISAT*PLLITL
Trigger: CAGAGTGATTAACAATGGCAAAGTTGCAGATATCAA...TGGATGGGCTGGGGACTGCGGGACAGAGCCTGCTACTACTTGGGAGTTGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000344791.6
CDS-3UTR CAA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATAAAGAAGCCCATCAGTaGGCCGGCCTGGGCACCGGT +
Preference number: 5 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDKEAHQ*AGLGTG
Trigger: ACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTT...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTAAAGAAGCCCATCAGTaGGCCGGCCTGGGCACCGGT +
Preference number: 5 (lower is better)
Translates to: RAQTFGWESTCMIETFPIKEAHQ*AGLGTG
Trigger: ACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTT...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTCCGAGCACGTCCAACTaGGGGGTCCTCACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: RAQTFGWESTCMIETFPIPSTSN*GVLTVL
Trigger: CAGCACTGTGAGGACCCCCAAGTTGGACGTGCTCGG...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGAGCACCACTGCTGCCTaGGCAGCGAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQSTTAA*AARRAG
Trigger: CCCAGCCCTTCTCGCTGCCAAGGCAGCAGTGGTGCT...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGTCCTGTCCAGAACTCTaGGAGGCCGGGCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQSCPEL*EAGPAA
Trigger: GGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGGA...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp TCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGCTGGGGTGTAAAGCTTaGGTGCTCCTCATTTCATCA +
Preference number: 5 (lower is better)
Translates to: SFLSTLMATPPRVEVTVVLGCKA*VLLISS
Trigger: TGATGAAATGAGGAGCACCAAAGCTTTACACCCCAG...CACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CAA 90 bp CTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGTGTGGTTGTTGTAAACTGTTaGTCTCCCGCACTCACTCCA +
Preference number: 5 (lower is better)
Translates to: LPQYSNGHSTASGSHCCVVVVNC*SPALTP
Trigger: TGGAGTGAGTGCGGGAGACAAACAGTTTACAACAAC...CACACAACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS TCA 90 bp GATGCTGAGCTAGATGCAGCAGAAGACAGATGTGCTGGCATGAATTaGGTTTTCAGAGTGTTAGGTGTACGTCCCAGTATGCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: DAELDAAEDRCAGMN*VFRVLGVRPSMLAG
Trigger: GCCTGCCAGCATACTGGGACGTACACCTAACACTCTGAAAACTCAATTCATGCCAGCACATCTGTCTTCTGCTGCATCTAGCTCAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS TCA 90 bp CTTAGACGCCAGGGCCTACACTCCAGTCACTTTCTTACAGATGCATaGTGGGCCTGCTTTCTAGCTAACCAAAGCAAACGCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LRRQGLHSSHFLTDA*WACFLANQSKRSFS
Trigger: TGAGAAGCTGCGTTTGCTTTGGTTAGCTAGAAAGCAGGCCCATCATGCATCTGTAAGAAAGTGACTGGAGTGTAGGCCCTGGCGTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604213.1
CDS CCA 90 bp ATGTATACGTGGCTGGTCGGAGTCCCACACACAACAGCTGGGCCTTaGAAGGTCTTGGTTAACAATTCCTCGTGCCTCATTTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: MYTWLVGVPHTTAGP*KVLVNNSSCLIFFT
Trigger: AGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCCACGTATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000450512.1
ENST00000479791.1
ENST00000684762.1
CDS-3UTR CAA 90 bp CTGGATAGGGGCCGAGGTCGCTGCTGTTTTAGATCCTGCCAGCTTAGACTGGGTGGTCTCACCACTAGCTaGTATTTTAAAGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: LDRGRGRCCFRSCQLRLGGLTTS*YFKVDQ
Trigger: TTGGTCTACTTTAAAATACAAGCTAGTGGTGAGACC...ACCCAGTCTAAGCTGGCAGGATCTAAAACAGCAGCGACCTCGGCCCCTATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGATCCTGTCCAGAACTCTaGGAGGCCGGGCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: WNIVSYIAYSVILRASPRSCPEL*EAGPAA
Trigger: GGCTGCTGGCCCGGCCTCCAAGAGTTCTGGACAGGA...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGACTGACAAAAGTGATTTaGTCATGGAACTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRLTKVI*SWNSKA
Trigger: GGCCTTGGAGTTCCATGACAAAATCACTTTTGTCAG...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTATGTGCTGGCATGAATaGAGTTTTCAGAGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCMCWHE*SFQSVR
Trigger: CCTAACACTCTGAAAACTCAATTCATGCCAGCACAT...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS TCA 90 bp AAGACAATACCAATCAGCAGCATGATGAAAACAGCATTCCACCACTaGATGCCACAATCTGCACCATCCATAGGCGTCTTCGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: KTIPISSMMKTAFHH*MPQSAPSIGVFGGA
Trigger: GGCACCTCCGAAGACGCCTATGGATGGTGCAGATTGTGGCATTCAGTGGTGGAATGCTGTTTTCATCATGCTGCTGATTGGTATTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000545021.2
ENST00000684762.1
CDS-3UTR CAA 90 bp CTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTGGTTTTGAAAGCTGGTaGAGTCCTGTGGCTAAAAAT +
Preference number: 5 (lower is better)
Translates to: LSFLSTLMATPPRVEVTVGFESW*SPVAKN
Trigger: ATTTTTAGCCACAGGACTCAACCAGCTTTCAAAACC...AACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CAA 90 bp AATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCGCTGCTGTTTTAAAGTTGTTGACTTTCTaGATATCTGCAACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: NGSLAAPLWIGAEVAAVLKLLTF*ISATLP
Trigger: TGGCAAAGTTGCAGATATCAAGAAAGTCAACAACTT...TAAAACAGCAGCGACCTCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000344791.6
CDS-3UTR CAA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAGGTCTCACCACTAGCTaGTATTTTAAAGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRGLTTS*YFKVDQ
Trigger: TTGGTCTACTTTAAAATACAAGCTAGTGGTGAGACC...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GCTGTCCTTCCTCAGTACTCTAATGGCCACTCCACCGCGAGTGGAAGTCACTGTTCAAAACTCCATCTTTaGAGCCCAATTATGTCCATT +
Preference number: 5 (lower is better)
Translates to: AVLPQYSNGHSTASGSHCSKLHL*SPIMSI
Trigger: AATGGACATAATTGGGCTCAAAAGATGGAGTTTTGA...ACAGTGACTTCCACTCGCGGTGGAGTGGCCATTAGAGTACTGAGGAAGGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CAA 90 bp TGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCATATTACATTTTCCTGCTaGGCTCCCCTGGGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: CTQVVPIKTPSFEPNYVHITFSC*APLGAL
Trigger: CAAGGCACCCAGGGGAGCCAAGCAGGAAAATGTAAT...ATGGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CAA 90 bp TGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCATGAGTGGAAGTCACTGTaGTGTGTACACAGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: CTQVVPIKTPSFEPNYVHEWKSL*CVHRWS
Trigger: GGACCACCTGTGTACACACAACAGTGACTTCCACTC...ATGGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CAA 90 bp CTAAATGTCACAGGGAAATGGCTCTCTTGCTGCACCTCTCTGGATAGGGGCCGAAAGTTGTTGACTTTCTaGATATCTGCAACTTTGCAG +
Preference number: 5 (lower is better)
Translates to: LNVTGKWLSCCTSLDRGRKLLTF*ISATLQ
Trigger: CTGCAAAGTTGCAGATATCAAGAAAGTCAACAACTT...TCGGCCCCTATCCAGAGAGGTGCAGCAAGAGAGCCATTTCCCTGTGACATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409796.5
CDS-3UTR CAA 90 bp GACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTGCAGAGATAGGGGTTTCAGTTCTTaGTGGGTCTCCATCAGGATC +
Preference number: 5 (lower is better)
Translates to: DIWLGKHLHDRNISYCRDRGFSS*WVSIRI
Trigger: GATCCTGATGGAGACCCACAAAGAACTGAAACCCCT...ATCTCTGCAATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp TGTACACAGGTGGTCCCAATCAAAACTCCATCTTTTGAGCCCAATTATGTCCATCTCATTTCATCAGTCTaGCTTCCCAGAGGACCCAGA +
Preference number: 5 (lower is better)
Translates to: CTQVVPIKTPSFEPNYVHLISSV*LPRGPR
Trigger: TCTGGGTCCTCTGGGAAGCAAGACTGATGAAATGAG...ATGGACATAATTGGGCTCAAAAGATGGAGTTTTGATTGGGACCACCTGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378904.4
CDS-3UTR CAA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGAGGGGTTTCAGTTCTTaGTGGGTCTCCATCAGGATC +
Preference number: 5 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQRGFSS*WVSIRI
Trigger: GATCCTGATGGAGACCCACAAAGAACTGAAACCCCT...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGCACATCAACAGCCAATaGCTAAAGCTGGGCCTAGTC +
Preference number: 5 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQHINSQ*LKLGLV
Trigger: GACTAGGCCCAGCTTTAGCAATTGGCTGTTGATGTG...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTTGGCTGGGAAAGCACTaGCATGATCGAAACATTTCC +
Preference number: 5 (lower is better)
Translates to: RAQTFGWESTCMIETFPIWLGKH*HDRNIS
Trigger: GGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCA...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGACACATCAACAGCCAATaGCTAAAGCTGGGCCTAGTC +
Preference number: 5 (lower is better)
Translates to: WNIVSYIAYSVILRASPRHINSQ*LKLGLV
Trigger: GACTAGGCCCAGCTTTAGCAATTGGCTGTTGATGTG...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp GAGAGAAATCGGAAATCACTCTTACATGGTGAGACCTTTGATACTTTTCTCCAGTGGCTGGGAAAGCACTaGCATGATCGAAACATTTCC +
Preference number: 5 (lower is better)
Translates to: ERNRKSLLHGETFDTFLQWLGKH*HDRNIS
Trigger: GGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCA...CTGGAGAAAAGTATCAAAGGTCTCACCATGTAAGAGTGATTTCCGATTTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000545021.2
CDS-3UTR CAA 90 bp AGAGCACAGACATTTGGCTGGGAAAGCACTTGCATGATCGAAACATTTCCTATTTTGATATCTGCAACTTaGCCATTGTTAATCACTCTG +
Preference number: 5 (lower is better)
Translates to: RAQTFGWESTCMIETFPILISAT*PLLITL
Trigger: CAGAGTGATTAACAATGGCAAAGTTGCAGATATCAA...AATAGGAAATGTTTCGATCATGCAAGTGCTTTCCCAGCCAAATGTCTGTGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000344791.6
CDS-3UTR CAA 90 bp TGGAACATTGTGAGTTACATTGCATATAGTGTTATTCTAAGGGCATCACCCAGATCTGCAACTTTGCCATaGTTAATCACTCTGAATGTT +
Preference number: 5 (lower is better)
Translates to: WNIVSYIAYSVILRASPRSATLP*LITLNV
Trigger: AACATTCAGAGTGATTAACAATGGCAAAGTTGCAGA...TCTGGGTGATGCCCTTAGAATAACACTATATGCAATGTAACTCACAATGTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332728.8
CDS GCA 72 bp AAGTCAGCGCTGGGCGGGCACTGGAGCGAGCCTGGCTaGGCGGAGAGCTCATCCCGGGACCACAGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: KSALGGHWSEPG*AESSSRDHRAR
Trigger: CCGGGCCCTGTGGTCCCGGGATGAGCTCTCCGCGCAGCCAGGCTCGCTCCAGTGCCCGCCCAGCGCTGACTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484050.1
CDS GCA 72 bp CCGGCGACTCGCGACCCGCGACCCGCGACCCGCAGCTaGCACCGCGCCTGCGGATTGGCTACGAACATCAGC +
Preference number: 6 (lower is better)
Translates to: PATRDPRPATRS*HRACGLATNIS
Trigger: GCTGATGTTCGTAGCCAATCCGCAGGCGCGGTGGCAGCTGCGGGTCGCGGGTCGCGGGTCGCGAGTCGCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484050.1
CDS GCA 72 bp CTGGGCCAGCTCCCGCTGCAGCAGCACCACGTCACCTaGTCCCGCCTGGGGAGGCTGGTGGACACCGCTCTT +
Preference number: 6 (lower is better)
Translates to: LGQLPLQQHHVT*SRLGRLVDTAL
Trigger: AAGAGCGGTGTCCACCAGCCTCCCCAGGCGGGAGCAGGTGACGTGGTGCTGCTGCAGCGGGAGCTGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000450512.1
ENST00000479791.1
ENST00000493256.1
ENST00000684762.1
CDS GCA 72 bp GCCGGCCTGGGCACCGGTGCCCGCGCCTGCTCTGTCTaGCTCTGGCAGTTCCACGGTCACTGTGGTCTCGGA +
Preference number: 6 (lower is better)
Translates to: AGLGTGARACSV*LWQFHGHCGLG
Trigger: TCCGAGACCACAGTGACCGTGGAACTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000484050.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS CCA 72 bp GGGAGGCAGCCAATGAAGTCAGCGCTGGGCGGGCACTaGAGCGAGCCTGGCTGCGCGGAGAGCTCATCCCGG +
Preference number: 6 (lower is better)
Translates to: GRQPMKSALGGH*SEPGCAESSSR
Trigger: CCGGGATGAGCTCTCCGCGCAGCCAGGCTCGCTCCAGTGCCCGCCCAGCGCTGACTTCATTGGCTGCCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484050.1
CDS GCA 72 bp CACTGGCCTCCCCCTTGTCGGCTCCCGGGTCATCCCTaGTGGGCAGCCCTGGAGCCCATAGGAAGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: HWPPPCRLPGHP*WAALEPIGSSG
Trigger: CCCACTGCTTCCTATGGGCTCCAGGGCTGCCCAGCAGGGATGACCCGGGAGCCGACAAGGGGGAGGCCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 72 bp AATGAAGTCAGCGCTGGGCGGGCACTGGAGCGAGCCTaGCTGCGCGGAGAGCTCATCCCGGGACCACAGGGC +
Preference number: 6 (lower is better)
Translates to: NEVSAGRALERA*LRGELIPGPQG
Trigger: GCCCTGTGGTCCCGGGATGAGCTCTCCGCGCAGCCAGGCTCGCTCCAGTGCCCGCCCAGCGCTGACTTCATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484050.1
CDS GCA 72 bp CATCAGTTGGCCGGCCTGGGCACCGGTGCCCGCGCCTaGTCTGTCTGCCTCTGGCAGTTCCACGGTCACTGT +
Preference number: 6 (lower is better)
Translates to: HQLAGLGTGARA*SVCLWQFHGHC
Trigger: ACAGTGACCGTGGAACTGCCAGAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000484050.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS CCA 72 bp TCCCTGCTGGGCAGCCCTGGAGCCCATAGGAAGCAGTaGGCCACGCAGTCCCACCGGGGCCTAATCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SLLGSPGAHRKQ*ATQSHRGLIWL
Trigger: CAGCCAGATTAGGCCCCGGTGGGACTGCGTGGCCCACTGCTTCCTATGGGCTCCAGGGCTGCCCAGCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 72 bp TCAATCCCCTTAAAGAAGCCCATCAGTTGGCCGGCCTaGGCACCGGTGCCCGCGCCTGCTCTGTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: SIPLKKPISWPA*APVPAPALSAS
Trigger: AGAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTTAAGGGGATTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS CAA 90 bp TGCACGCTCAATATCCTGGTCAATCCCCTTAAAGAAGCCCATCAGTaGGCCGGCCTGGGCACCGGTGCCCGCGCCTGCTCTGTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: CTLNILVNPLKEAHQ*AGLGTGARACSVCL
Trigger: GAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTTAAGGGGATTGACCAGGATATTGAGCGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS GCA 72 bp GCTGATTGGCTGCAGCCTGCTCGGTCGGTCGTCCGGTaGTCACAAGCAGCCCGAGGACCACTCGGTTGTAAA +
Preference number: 6 (lower is better)
Translates to: ADWLQPARSVVR*SQAARGPLGCK
Trigger: TTTACAACCGAGTGGTCCTCGGGCTGCTTGTGAGCACCGGACGACCGACCGAGCAGGCTGCAGCCAATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 72 bp ATATCCTGGTCAATCCCCTTAAAGAAGCCCATCAGTTaGCCGGCCTGGGCACCGGTGCCCGCGCCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: ISWSIPLKKPIS*PAWAPVPAPAL
Trigger: CAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTTAAGGGGATTGACCAGGATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS CCA 72 bp GCTCTTCCTGTGCGTCGAGACTCTGTCATGTTTGCCTaGGGACACAAGGCGCTGGCTTTGCCACCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: ALPVRRDSVMFA*GHKALALPPGS
Trigger: GCTGCCTGGTGGCAAAGCCAGCGCCTTGTGTCCCCAGGCAAACATGACAGAGTCTCGACGCACAGGAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CAA 72 bp AATATCCTGGTCAATCCCCTTAAAGAAGCCCATCAGTaGGCCGGCCTGGGCACCGGTGCCCGCGCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: NILVNPLKEAHQ*AGLGTGARACS
Trigger: AGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTTAAGGGGATTGACCAGGATATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000493256.1
ENST00000545021.2
ENST00000684762.1
CDS CAA 90 bp GTAAAGACGGACTGGCTCTTCCTGTGCGTCGAGACTCTGTCATGTTaGCCTGGGGACACAAGGCGCTGGCTTTGCCACCAGGCAGCCCCT +
Preference number: 6 (lower is better)
Translates to: VKTDWLFLCVETLSC*PGDTRRWLCHQAAP
Trigger: AGGGGCTGCCTGGTGGCAAAGCCAGCGCCTTGTGTCCCCAGGCAAACATGACAGAGTCTCGACGCACAGGAAGAGCCAGTCCGTCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS GCA 72 bp GTGACGGCTGGCACTGCAACTGCTAGTCTGGGGGCTTaGCCTGGAACTGTACCCATTGCCATCGAGCCATTG +
Preference number: 6 (lower is better)
Translates to: VTAGTATASLGA*PGTVPIAIEPL
Trigger: CAATGGCTCGATGGCAATGGGTACAGTTCCAGGGCAAGCCCCCAGACTAGCAGTTGCAGTGCCAGCCGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000545021.2
ENST00000684762.1
CDS GCA 72 bp CACGCAGTCCCACCGGGGCCTAATCTGGCTGTTGCATaGACAGTGCTGTGGATGAGTGGAATCCATTCGGCC +
Preference number: 6 (lower is better)
Translates to: HAVPPGPNLAVA*TVLWMSGIHSA
Trigger: GGCCGAATGGATTCCACTCATCCACAGCACTGTGCATGCAACAGCCAGATTAGGCCCCGGTGGGACTGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS GCA 72 bp ACTGGCTCTTCCTGTGCGTCGAGACTCTGTCATGTTTaGCTGGGGACACAAGGCGCTGGCTTTGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: TGSSCASRLCHV*LGTQGAGFATR
Trigger: CCTGGTGGCAAAGCCAGCGCCTTGTGTCCCCAGGCAAACATGACAGAGTCTCGACGCACAGGAAGAGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 72 bp AAGATGATTTTCAGTCGGAGCCCTGTGCCAGCTGATTaGCTGCAGCCTGCTCGGTCGGTCGTCCGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: KMIFSRSPVPAD*LQPARSVVRCS
Trigger: TGAGCACCGGACGACCGACCGAGCAGGCTGCAGCCAATCAGCTGGCACAGGGCTCCGACTGAAAATCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CAA 72 bp GACTGGCTCTTCCTGTGCGTCGAGACTCTGTCATGTTaGCCTGGGGACACAAGGCGCTGGCTTTGCCACCAG +
Preference number: 6 (lower is better)
Translates to: DWLFLCVETLSC*PGDTRRWLCHQ
Trigger: CTGGTGGCAAAGCCAGCGCCTTGTGTCCCCAGGCAAACATGACAGAGTCTCGACGCACAGGAAGAGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS TCA 72 bp GTCCTCATCCCGCAGAAAGTTGCTGAGCCCCGTCTGTaGGAGGTAAGCCCTGATCCCAGCTGTTGCAGGCTT +
Preference number: 6 (lower is better)
Translates to: VLIPQKVAEPRL*EVSPDPSCCRL
Trigger: AAGCCTGCAACAGCTGGGATCAGGGCTTACCTCTCACAGACGGGGCTCAGCAACTTTCTGCGGGATGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS GCA 72 bp GCATTCCAATTCTGGCTAAATAGGGGAGTCCTTGGCTaGTACAGCAGGCCTCTCCTGACGGCCTGGCAGGGT +
Preference number: 6 (lower is better)
Translates to: AFQFWLNRGVLG*YSRPLLTAWQG
Trigger: ACCCTGCCAGGCCGTCAGGAGAGGCCTGCTGTAGCAGCCAAGGACTCCCCTATTTAGCCAGAATTGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479791.1
ENST00000493256.1
CDS CCA 72 bp CACGGGGCCAGGAGGTTTCAGACGTTCCAGGTCAAGTaGGCTTGTGTCCTCATCCCGCAGAAAGTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: HGARRFQTFQVK*ACVLIPQKVAE
Trigger: CTCAGCAACTTTCTGCGGGATGAGGACACAAGCCCACTTGACCTGGAACGTCTGAAACCTCCTGGCCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS GCA 72 bp GCTGGGCCTTGGAAGGTCTTGGTTAACAATTCCTCGTaGCTCATTTTCTTCACTCAGCGCCCAGGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: AGPWKVLVNNSS*LIFFTQRPGSA
Trigger: GGCGGAGCCTGGGCGCTGAGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450512.1
ENST00000684762.1
CDS CCA 72 bp CCCGAGTCCCCACTGCCATTCTTAAACATGTATACGTaGCTGGTCGGAGTCCCACACACAACAGCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PESPLPFLNMYT*LVGVPHTTAGP
Trigger: AGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCCACGTATACATGTTTAAGAATGGCAGTGGGGACTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000450512.1
ENST00000479791.1
ENST00000493256.1
ENST00000684762.1
CDS CAA 90 bp TCCTTTCACGAAGACCTTTTTCACCTGCAGGCTTCTTTCTCTGGGTaGAGACAGGGTCAAGGAAACCGTCCCAACGCCCCCACTGGCCTC +
Preference number: 6 (lower is better)
Translates to: SFHEDLFHLQASFSG*RQGQGNRPNAPTGL
Trigger: GAGGCCAGTGGGGGCGTTGGGACGGTTTCCTTGACCCTGTCTCAACCCAGAGAAAGAAGCCTGCAGGTGAAAAAGGTCTTCGTGAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS TCA 72 bp CCTGTTTTCAGGCCGATTCTGTGGCACCAGCCAAGATaGTTTTCAGTCGGAGCCCTGTGCCAGCTGATTGGC +
Preference number: 6 (lower is better)
Translates to: PVFRPILWHQPR*FSVGALCQLIG
Trigger: GCCAATCAGCTGGCACAGGGCTCCGACTGAAAATCATCTTGGCTGGTGCCACAGAATCGGCCTGAAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS GCA 72 bp GCACTCACTCCAGTAAAGACGGACTGGCTCTTCCTGTaGGTCGAGACTCTGTCATGTTTGCCTGGGGACACA +
Preference number: 6 (lower is better)
Translates to: ALTPVKTDWLFL*VETLSCLPGDT
Trigger: TGTGTCCCCAGGCAAACATGACAGAGTCTCGACGCACAGGAAGAGCCAGTCCGTCTTTACTGGAGTGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CAA 90 bp TTGGTGCTCCTCATTTCATCAGTCTTGCTTCCCAGAGGACCCAGATaGACAGGGCATCTTACTCGGCTTAGACGCCAGGGCCTACACTCC +
Preference number: 6 (lower is better)
Translates to: LVLLISSVLLPRGPR*TGHLTRLRRQGLHS
Trigger: GGAGTGTAGGCCCTGGCGTCTAAGCCGAGTAAGATGCCCTGTCAATCTGGGTCCTCTGGGAAGCAAGACTGATGAAATGAGGAGCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CAA 90 bp TGGCTGGTCGGAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTaGGTTAACAATTCCTCGTGCCTCATTTTCTTCACTCAGCGCCCA +
Preference number: 6 (lower is better)
Translates to: WLVGVPHTTAGPWKV*VNNSSCLIFFTQRP
Trigger: TGGGCGCTGAGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450512.1
ENST00000684762.1
CDS GCA 72 bp GATGAAAACAGCATTCCACCACTGAATGCCACAATCTaGACCATCCATAGGCGTCTTCGGAGGTGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: DENSIPPLNATI*TIHRRLRRCRE
Trigger: CTCCCGGCACCTCCGAAGACGCCTATGGATGGTGCAGATTGTGGCATTCAGTGGTGGAATGCTGTTTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000545021.2
ENST00000684762.1
CDS CCA 72 bp TGGCTGGTCGGAGTCCCACACACAACAGCTGGGCCTTaGAAGGTCTTGGTTAACAATTCCTCGTGCCTCATT +
Preference number: 6 (lower is better)
Translates to: WLVGVPHTTAGP*KVLVNNSSCLI
Trigger: AATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000450512.1
ENST00000479791.1
ENST00000493256.1
ENST00000684762.1
CDS CCA 72 bp TCTTCCCAGGCAGCCCCAGCCCCAAATGCACATAGCTaGGGTGTAAAGCTTTGGTGCTCCTCATTTCATCAG +
Preference number: 6 (lower is better)
Translates to: SSQAAPAPNAHS*GVKLWCSSFHQ
Trigger: CTGATGAAATGAGGAGCACCAAAGCTTTACACCCCAGCTATGTGCATTTGGGGCTGGGGCTGCCTGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CAA 72 bp CTCATTTCATCAGTCTTGCTTCCCAGAGGACCCAGATaGACAGGGCATCTTACTCGGCTTAGACGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: LISSVLLPRGPR*TGHLTRLRRQG
Trigger: GCCCTGGCGTCTAAGCCGAGTAAGATGCCCTGTCAATCTGGGTCCTCTGGGAAGCAAGACTGATGAAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CAA 90 bp TGGCTGGTCGGAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTaGGTTAACAATTCCTCGTGCCTCATTTTCTTCACTGCAGGACCA +
Preference number: 6 (lower is better)
Translates to: WLVGVPHTTAGPWKV*VNNSSCLIFFTAGP
Trigger: TGGTCCTGCAGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCCGACCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000344791.6
CDS CCA 72 bp TGTTTGTCTCCCGCACTCACTCCAGTAAAGACGGACTaGCTCTTCCTGTGCGTCGAGACTCTGTCATGTTTG +
Preference number: 6 (lower is better)
Translates to: CLSPALTPVKTD*LFLCVETLSCL
Trigger: CAAACATGACAGAGTCTCGACGCACAGGAAGAGCCAGTCCGTCTTTACTGGAGTGAGTGCGGGAGACAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CAA 90 bp TGCAGAGAAAGAAATGCGCTAACCCTCCCTCTTTGGGGGCCAGGGTaGGGAACTAAAGGTACTCCCACCTGCATTCCAATTCTGGCTAAA +
Preference number: 6 (lower is better)
Translates to: CRERNALTLPLWGPG*GTKGTPTCIPILAK
Trigger: TTTAGCCAGAATTGGAATGCAGGTGGGAGTACCTTTAGTTCCCAACCCTGGCCCCCAAAGAGGGAGGGTTAGCGCATTTCTTTCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479791.1
CDS CAA 90 bp TGTCGAGGGACCTTGGTGCCCTTATCTAAGTCCAAGCCTTCTGTGTaGCATCCTGGGTCTCATCATCTCCTTCTCAAGGTCTTCGCTTCT +
Preference number: 6 (lower is better)
Translates to: CRGTLVPLSKSKPSV*HPGSHHLLLKVFAS
Trigger: AGAAGCGAAGACCTTGAGAAGGAGATGATGAGACCCAGGATGCAACACAGAAGGCTTGGACTTAGATAAGGGCACCAAGGTCCCTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604213.1
CDS GCA 72 bp GCCCCAAATGCACATAGCTGGGGTGTAAAGCTTTGGTaGTCCTCATTTCATCAGTCTTGCTTCCCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: APNAHSWGVKLW*SSFHQSCFPED
Trigger: GTCCTCTGGGAAGCAAGACTGATGAAATGAGGAGCACCAAAGCTTTACACCCCAGCTATGTGCATTTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CCA 72 bp GAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTTaGTTAACAATTCCTCGTGCCTCATTTTCTTCACGC +
Preference number: 6 (lower is better)
Translates to: ESHTQQLGLGRS*LTIPRASFSSR
Trigger: GCGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409796.5
ENST00000493256.1
CDS CAA 72 bp GGAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTaGGTTAACAATTCCTCGTGCCTCATTTTCTTCACG +
Preference number: 6 (lower is better)
Translates to: GVPHTTAGPWKV*VNNSSCLIFFT
Trigger: CGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409796.5
ENST00000493256.1
CDS TCA 72 bp CAGGGCCTACACTCCAGTCACTTTCTTACAGATGCATaGTGGGCCTGCTTTCTAGCTAACCAAAGCAAACGC +
Preference number: 6 (lower is better)
Translates to: QGLHSSHFLTDA*WACFLANQSKR
Trigger: GCGTTTGCTTTGGTTAGCTAGAAAGCAGGCCCATCATGCATCTGTAAGAAAGTGACTGGAGTGTAGGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS GCA 72 bp CTGTGGATGAGTGGAATCCATTCGGCCTCCAGTAACTaGTTCTCACAGGAAATACGCCAAAGCCTGTTAGAG +
Preference number: 6 (lower is better)
Translates to: LWMSGIHSASSN*FSQEIRQSLLE
Trigger: CTCTAACAGGCTTTGGCGTATTTCCTGTGAGAAGCAGTTACTGGAGGCCGAATGGATTCCACTCATCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS GCA 72 bp CCTTGGTGCCCTTATCTAAGTCCAAGCCTTCTGTGTTaGATCCTGGGTCTCATCATCTCCTTCTCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: PWCPYLSPSLLC*ILGLIISFSRS
Trigger: AGACCTTGAGAAGGAGATGATGAGACCCAGGATGCAACACAGAAGGCTTGGACTTAGATAAGGGCACCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604213.1
CDS CCA 72 bp GAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTTaGTTAACAATTCCTCGTGCCTCATTTTCTTCACTG +
Preference number: 6 (lower is better)
Translates to: ESHTQQLGLGRS*LTIPRASFSSL
Trigger: CAGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332728.8
ENST00000344791.6
CDS CCA 72 bp GAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTTaGTTAACAATTCCTCGTGCCTCATTTTCTTCACTC +
Preference number: 6 (lower is better)
Translates to: ESHTQQLGLGRS*LTIPRASFSSL
Trigger: GAGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450512.1
ENST00000684762.1
CDS CAA 72 bp GGAGTCCCACACACAACAGCTGGGCCTTGGAAGGTCTaGGTTAACAATTCCTCGTGCCTCATTTTCTTCACT +
Preference number: 6 (lower is better)
Translates to: GVPHTTAGPWKV*VNNSSCLIFFT
Trigger: AGTGAAGAAAATGAGGCACGAGGAATTGTTAACCAAGACCTTCCAAGGCCCAGCTGTTGTGTGTGGGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000450512.1
ENST00000479791.1
ENST00000684762.1
CDS CAA 72 bp GGGTGTAAAGCTTTGGTGCTCCTCATTTCATCAGTCTaGCTTCCCAGAGGACCCAGATTGACAGGGCATCTT +
Preference number: 6 (lower is better)
Translates to: GCKALVLLISSV*LPRGPRLTGHL
Trigger: AAGATGCCCTGTCAATCTGGGTCCTCTGGGAAGCAAGACTGATGAAATGAGGAGCACCAAAGCTTTACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS TCA 72 bp CCAATCAGCAGCATGATGAAAACAGCATTCCACCACTaGATGCCACAATCTGCACCATCCATAGGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: PISSMMKTAFHH*MPQSAPSIGVF
Trigger: GAAGACGCCTATGGATGGTGCAGATTGTGGCATTCAGTGGTGGAATGCTGTTTTCATCATGCTGCTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332728.8
ENST00000344791.6
ENST00000409796.5
ENST00000479791.1
ENST00000545021.2
ENST00000684762.1
CDS TCA 72 bp CTAGATGCAGCAGAAGACAGATGTGCTGGCATGAATTaGGTTTTCAGAGTGTTAGGTGTACGTCCCAGTATG +
Preference number: 6 (lower is better)
Translates to: LDAAEDRCAGMN*VFRVLGVRPSM
Trigger: CATACTGGGACGTACACCTAACACTCTGAAAACTCAATTCATGCCAGCACATCTGTCTTCTGCTGCATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CAA 72 bp ATGGTGAAGACAATGCTAAAGGTTGTTGTAAACTGTTaGTCTCCCGCACTCACTCCAGTAAAGACGGACTGG +
Preference number: 6 (lower is better)
Translates to: MVKTMLKVVVNC*SPALTPVKTDW
Trigger: CCAGTCCGTCTTTACTGGAGTGAGTGCGGGAGACAAACAGTTTACAACAACCTTTAGCATTGTCTTCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1
CDS CAA 90 bp TTTTATCAAATGGTGAAGACAATGCTAAAGGTTGTTGTAAACTGTTaGTCTCCCGCACTCACTCCAGTAAAGACGGACTGGCTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: FYQMVKTMLKVVVNC*SPALTPVKTDWLFL
Trigger: CAGGAAGAGCCAGTCCGTCTTTACTGGAGTGAGTGCGGGAGACAAACAGTTTACAACAACCTTTAGCATTGTCTTCACCATTTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378904.4
ENST00000496108.5
ENST00000604213.1