Pregenerated sensors for LYSMD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000140280Ensembl transcript IDs: ENST00000267838.7, ENST00000454181.6, ENST00000558126.1, ENST00000560491.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTCAGAAGGGATGTTTTTaGATCTTCAGTTGTTGGATT | + |
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Preference number: 2 (lower is better) Translates to: SVQLQQVELPSYDFKMDTQKGCF*IFSCWI Trigger: AATCCAACAACTGAAGATTCAAAAACATCCCTTCTG...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| 3UTR TCA 72 bp | AAGATGGACACTATAGGAATCCAGAAGGGATGTTTTTaGATCTTCAGTTGTTGGATTCTTTATGGTCCAAAC | + |
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Preference number: 3 (lower is better) Translates to: KMDTIGIQKGCF*IFSCWILYGPN Trigger: GTTTGGACCATAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR TCA 90 bp | GATGGACACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATCCACATGGCGCTCGATaGCGCCGGCGCCCAGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: DGHYRNPEGMFLNLQLLDPHGAR*RRRPAA Trigger: CGCCGCTGGGCGCCGGCGTCATCGAGCGCCATGTGG...ATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR GCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGATCCGCCATGGGTCCTaGCGAGGCCGCCGGGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKIRHGS*RGRRVG Trigger: CCCGACCCGGCGGCCTCGGCAGGACCCATGGCGGAT...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR GCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGCTCCCGCCGCGGCCTaGCGGTACCGGGAAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQAPAAA*RYREDP Trigger: AGGGTCTTCCCGGTACCGGCAGGCCGCGGCGGGAGC...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS-3UTR CCA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTGCGAGGAATCCGCCATaGGTCCTGCCGAGGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: SVQLQQVELPSYDFKMDTARNPP*VLPRPP Trigger: CGGCGGCCTCGGCAGGACCCATGGCGGATTCCTCGC...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR GCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGCACGCTGGCGGTGCTaGCGTACGAGCGGGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQARWRC*RTSGSW Trigger: CCAAGACCCGCTCGTACGGCAGCACCGCCAGCGTGC...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR GCA 90 bp | GATGGACACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATCCCGCGCGGACCCGGTaGTCCACATGGCGCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: DGHYRNPEGMFLNLQLLDPARTR*STWRSM Trigger: CATCGAGCGCCATGTGGAGCACCGGGTCCGCGCGGG...ATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR CCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGCGTACGAGCGGGTCTTaGTGCGGGCCAGGCTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKRTSGS*CGPGSA Trigger: CGCTGAGCCTGGCCCGCACCAAGACCCGCTCGTACG...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR CCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGACCCGGTGCTCCACATaGCGCTCGATGACGCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKTRCST*RSMTPA Trigger: CGCCGGCGTCATCGAGCGCCATGTGGAGCACCGGGT...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR GCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAAGCCCTGGCAGAACCCTaGCCTGGCCACGGCGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVEALAEP*PGHGEK Trigger: TTTTTCGCCGTGGCCAGGGCAGGGTTCTGCCAGGGC...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS-3UTR CCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAATTGGCGATAGAGCCCTaGCAGAACCCTGCCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVELAIEP*QNPALA Trigger: GGCCAGGGCAGGGTTCTGCCAGGGCTCTATCGCCAA...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | CACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTTTACCCGCACGCTGGCGGTaGTGCCGTACGAGCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HYRNPEGMFLNLQLLDSLPARWR*CRTSGS Trigger: AGACCCGCTCGTACGGCAGCACCGCCAGCGTGCGGG...TAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR GCA 90 bp | CACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTTTATTGAGCGCGATGCCCTaGAGCGTGTCGCCCGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: HYRNPEGMFLNLQLLDSLLSAMP*SVSPAR Trigger: CCGCGCGGGCGACACGCTGCAGGGCATCGCGCTCAA...TAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR GCA 90 bp | CACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTTTACTACGCTTCCCAGCCTaGTCCGCTGCAGCCGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: HYRNPEGMFLNLQLLDSLLRFPA*SAAAAR Trigger: GCGCGCGGCTGCAGCGGAGCAGGCTGGGAAGCGTAG...TAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454181.6 |
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| CDS-3UTR GCA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTAGGTGCTTCCTCCCCTaGAGAGCTGTGGCGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SVQLQQVELPSYDFKMDTRCFLP*RAVAGF Trigger: GAACCCCGCCACAGCTCTGCAGGGGAGGAAGCACCT...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000454181.6 |
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| CDS-3UTR GCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGTCTCCCCGACCCAGGTaGTTCCTCCCCTGCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKSPRPR*FLPCRA Trigger: AGCTCTGCAGGGGAGGAAGCACCTGGGTCGGGGAGA...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR GCA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTCGTCTCCAAAGAGCCTaGCCAGGCTTCTCCCCGACC | + |
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Preference number: 4 (lower is better) Translates to: SVQLQQVELPSYDFKMDTRLQRA*PGFSPT Trigger: GGTCGGGGAGAAGCCTGGGCAGGCTCTTTGGAGACG...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR GCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGCCCCAGGTGGACCCCTaGTCCATTGGCGATAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKPQVDP*SIGDRA Trigger: GGCTCTATCGCCAATGGAGCAGGGGTCCACCTGGGG...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | GATGGACACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTCCCCGACCCAGGTaGTTCCTCCCCTGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: DGHYRNPEGMFLNLQLLDSPRPR*FLPCRA Trigger: AGCTCTGCAGGGGAGGAAGCACCTGGGTCGGGGAGA...ATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR GCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAACAGCAGGAGCCAGCTTaGACAGACCTTCCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVEQQEPA*TDLPAL Trigger: CAGAGCTGGAAGGTCTGTGCAAGCTGGCTCCTGCTG...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAAAGGCTTGAAAGCCTTTaGCATCCACGCTCTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVERLESL*HPRSPE Trigger: CTCCGGAGAGCGTGGATGGCAAAGGCTTTCAAGCCT...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR CCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAATTCCCCGGCCACCACTaGCTCCTCTTCCTGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVEFPGHH*LLFLRK Trigger: TTTTCTCAGGAAGAGGAGCCAGTGGTGGCCGGGGAA...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR CCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAACAGATTCTTGAGGACTaGGAGGAGGGAGGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVEQILED*EEGGLP Trigger: GGGAAGACCTCCCTCCTCCCAGTCCTCAAGAATCTG...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR TCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGCAGGAAATCTCTGGCTaGCACTTCCTCAGGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKQEISG*HFLRLH Trigger: GTGCAGCCTGAGGAAGTGTCAGCCAGAGATTTCCTG...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR TCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGCAGGAAATCTCTGGCTaGCACTTCCTCAGGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQQEISG*HFLRLH Trigger: GTGCAGCCTGAGGAAGTGTCAGCCAGAGATTTCCTG...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR TCA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTCTCTGCCTCCTTTATTaGTTCCCCAGCAGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVQLQQVELPSYDFKMDTLCLLY*FPSRSQ Trigger: CTGGCTCCTGCTGGGGAATCAATAAAGGAGGCAGAG...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | CACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTTTATTCCCGCAGGGACAGTaGGGGCGAGGAATCCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HYRNPEGMFLNLQLLDSLFPQGQ*GRGIRH Trigger: ATGGCGGATTCCTCGCCCGCACTGTCCCTGCGGGAA...TAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR GCA 90 bp | CACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTTTACGTCTCCAAAGAGCCTaGCCAGGCTTCTCCCCGACC | + |
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Preference number: 4 (lower is better) Translates to: HYRNPEGMFLNLQLLDSLRLQRA*PGFSPT Trigger: GGTCGGGGAGAAGCCTGGGCAGGCTCTTTGGAGACG...TAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR GCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGCTTCCGTGTCAGGATaGTCGCTCACAGGAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQASVSG*SLTGML Trigger: GAGCATTCCTGTGAGCGAGCATCCTGACACGGAAGC...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR CCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGTTCCCCGGCCACCACTaGCTCCTCTTCCTGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQFPGHH*LLFLRK Trigger: TTTTCTCAGGAAGAGGAGCCAGTGGTGGCCGGGGAA...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR CCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGCAGATTCTTGAGGACTaGGAGGAGGGAGGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKQILED*EEGGLP Trigger: GGGAAGACCTCCCTCCTCCCAGTCCTCAAGAATCTG...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR TCA 90 bp | GATGGACACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATCAGGAAATCTCTGGCTaGCACTTCCTCAGGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: DGHYRNPEGMFLNLQLLDQEISG*HFLRLH Trigger: GTGCAGCCTGAGGAAGTGTCAGCCAGAGATTTCCTG...ATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR TCA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTTGCTCATCACAGGCTTaGAAGCCTTTGCCATCCACG | + |
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Preference number: 4 (lower is better) Translates to: SVQLQQVELPSYDFKMDTCSSQA*KPLPST Trigger: CGTGGATGGCAAAGGCTTTCAAGCCTGTGATGAGCA...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR TCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGAGCAGTTTCATTTTCTaGGACCGCTCTCAACGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQSSFIF*DRSQRG Trigger: GCCGCGTTGAGAGCGGTCTCAGAAAATGAAACTGCT...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558126.1 |
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| CDS-3UTR GCA 90 bp | GATGGACACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATAGGCTTGAAAGCCTTTaGCATCCACGCTCTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: DGHYRNPEGMFLNLQLLDRLESL*HPRSPE Trigger: CTCCGGAGAGCGTGGATGGCAAAGGCTTTCAAGCCT...ATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR CCA 90 bp | GATGGACACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATCAGATTCTTGAGGACTaGGAGGAGGGAGGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: DGHYRNPEGMFLNLQLLDQILED*EEGGLP Trigger: GGGAAGACCTCCCTCCTCCCAGTCCTCAAGAATCTG...ATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTTGCAAGTCAAGTCTCTaGAGGAAATCTCTGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SVQLQQVELPSYDFKMDTCKSSL*RKSLAD Trigger: GTCAGCCAGAGATTTCCTGCAGAGACTTGACTTGCA...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGTGCAAGTCAAGTCTCTaGAGGAAATCTCTGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQCKSSL*RKSLAD Trigger: GTCAGCCAGAGATTTCCTGCAGAGACTTGACTTGCA...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGTGCAAGTCAAGTCTCTaGAGGAAATCTCTGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKCKSSL*RKSLAD Trigger: GTCAGCCAGAGATTTCCTGCAGAGACTTGACTTGCA...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | CACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTTTAGCTTCCGTGTCAGGATaGTCGCTCACAGGAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: HYRNPEGMFLNLQLLDSLASVSG*SLTGML Trigger: GAGCATTCCTGTGAGCGAGCATCCTGACACGGAAGC...TAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR TCA 90 bp | CACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTTTATGCTCATCACAGGCTTaGAAGCCTTTGCCATCCACG | + |
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Preference number: 4 (lower is better) Translates to: HYRNPEGMFLNLQLLDSLCSSQA*KPLPST Trigger: CGTGGATGGCAAAGGCTTTCAAGCCTGTGATGAGCA...TAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS-3UTR GCA 90 bp | GATGGACACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTGCAAGTCAAGTCTCTaGAGGAAATCTCTGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: DGHYRNPEGMFLNLQLLDCKSSL*RKSLAD Trigger: GTCAGCCAGAGATTTCCTGCAGAGACTTGACTTGCA...ATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAAGTGATAGAGGGAAGTTaGATAGGGACTTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVEVIEGS*IGTFFI Trigger: GATGAAGAAAGTCCCTATGCAACTTCCCTCTATCAC...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTGTGATAGAGGGAAGTTaGATAGGGACTTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVQLQQVELPSYDFKMDTVIEGS*IGTFFI Trigger: GATGAAGAAAGTCCCTATGCAACTTCCCTCTATCAC...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTGATAGAGGGAAGTTaGATAGGGACTTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQVIEGS*IGTFFI Trigger: GATGAAGAAAGTCCCTATGCAACTTCCCTCTATCAC...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR CCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAACTTCTTTTAGCTTCTTaGCTGCCTGTGTTGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVELLLAS*LPVLIT Trigger: AGTTATCAACACAGGCAGCCAAGAAGCTAAAAGAAG...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR TCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGCAACAAAGGCTTCTCTaGTATAACTGGGATGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQQQRLL*YNWDVQ Trigger: TTGAACATCCCAGTTATATCAGAGAAGCCTTTGTTG...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000560491.2 |
||
| CDS-3UTR TCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAACAGAAGGGATGTTTTTaGATCTTCAGTTGTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVEQKGCF*IFSCWI Trigger: AATCCAACAACTGAAGATTCAAAAACATCCCTTCTG...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR GCA 90 bp | GATGGACACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATGTGATAGAGGGAAGTTaGATAGGGACTTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DGHYRNPEGMFLNLQLLDVIEGS*IGTFFI Trigger: GATGAAGAAAGTCCCTATGCAACTTCCCTCTATCAC...ATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR GCA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAATTTAGGCTACAACCTTaGCATCATGCCATAATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIESQRELITSVQLQQVEFRLQP*HHAIIK Trigger: CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAA...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR GCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGTTAATCTGTTCCATCTaGAAGGTTAAGAGCGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKLICSI*KVKSES Trigger: GCTTTCGCTCTTAACCTTGCAGATGGAACAGATTAA...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560491.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTCTTCTTTTAGCTTCTTaGCTGCCTGTGTTGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: SVQLQQVELPSYDFKMDTLLLAS*LPVLIT Trigger: AGTTATCAACACAGGCAGCCAAGAAGCTAAAAGAAG...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR CCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGCTTCTTTTAGCTTCTTaGCTGCCTGTGTTGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQLLLAS*LPVLIT Trigger: AGTTATCAACACAGGCAGCCAAGAAGCTAAAAGAAG...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR TCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGCAGAAGGGATGTTTTTaGATCTTCAGTTGTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQQKGCF*IFSCWI Trigger: AATCCAACAACTGAAGATTCAAAAACATCCCTTCTG...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR GCA 90 bp | CCTACAAAAGTGATGAGCTTTAGGCTACAACCTTGCCATCATGCCATAATAAAGTTTAGGCTACAACCTTaGCATCATGCCATAATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTKVMSFRLQPCHHAIIKFRLQP*HHAIIK Trigger: CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAA...CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR GCA 90 bp | CTTAAAATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGTTTAGGCTACAACCTTaGCATCATGCCATAATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKIIESQRELITSVQLQQFRLQP*HHAIIK Trigger: CTTTATTATGGCATGATGGCAAGGTTGTAGCCTAAA...CTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAATTTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR TCA 90 bp | GATGGACACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATCAGAAGGGATGTTTTTaGATCTTCAGTTGTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: DGHYRNPEGMFLNLQLLDQKGCF*IFSCWI Trigger: AATCCAACAACTGAAGATTCAAAAACATCCCTTCTG...ATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTGTCCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR CCA 90 bp | CACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTTTACTTCTTTTAGCTTCTTaGCTGCCTGTGTTGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: HYRNPEGMFLNLQLLDSLLLLAS*LPVLIT Trigger: AGTTATCAACACAGGCAGCCAAGAAGCTAAAAGAAG...TAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
||
| CDS-3UTR TCA 90 bp | CACTATAGGAATCCAGAAGGGATGTTTTTGAATCTTCAGTTGTTGGATTCTTTACAGAAGGGATGTTTTTaGATCTTCAGTTGTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: HYRNPEGMFLNLQLLDSLQKGCF*IFSCWI Trigger: AATCCAACAACTGAAGATTCAAAAACATCCCTTCTG...TAAAGAATCCAACAACTGAAGATTCAAAAACATCCCTTCTGGATTCCTATAGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS TCA 90 bp | GCAGCGTGTCGCCCGCGCGGACCCGGTGCTCCACATGGCGCTCGATaGCGCCGGCGCCCAGCGGCGCCCGCACGCTGGCGGTGCTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AACRPRGPGAPHGAR*RRRPAAPARWRCCR Trigger: ACGGCAGCACCGCCAGCGTGCGGGCGCCGCTGGGCGCCGGCGTCATCGAGCGCCATGTGGAGCACCGGGTCCGCGCGGGCGACACGCTGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS CCA 90 bp | GCGATGCCCTGCAGCGTGTCGCCCGCGCGGACCCGGTGCTCCACATaGCGCTCGATGACGCCGGCGCCCAGCGGCGCCCGCACGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AMPCSVSPARTRCST*RSMTPAPSGARTLA Trigger: CGCCAGCGTGCGGGCGCCGCTGGGCGCCGGCGTCATCGAGCGCCATGTGGAGCACCGGGTCCGCGCGGGCGACACGCTGCAGGGCATCGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267838.7 |
||
| CDS GCA 90 bp | TACTTGAGCGCGATGCCCTGCAGCGTGTCGCCCGCGCGGACCCGGTaGTCCACATGGCGCTCGATGACGCCGGCGCCCAGCGGCGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: YLSAMPCSVSPARTR*STWRSMTPAPSGAR Trigger: GCGGGCGCCGCTGGGCGCCGGCGTCATCGAGCGCCATGTGGAGCACCGGGTCCGCGCGGGCGACACGCTGCAGGGCATCGCGCTCAAGTA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS GCA 90 bp | AGCGAAAGCAGCTCCCGCCGCGGCCTGCCGGTACCGGGAAGACCCTaGAGAGCGAGGGAGCCGGGGAGCGCTGAAGCCCGCGGCCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SESSSRRGLPVPGRP*RAREPGSAEARGRW Trigger: CCAACGGCCGCGGGCTTCAGCGCTCCCCGGCTCCCTCGCTCTGCAGGGTCTTCCCGGTACCGGCAGGCCGCGGCGGGAGCTGCTTTCGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS GCA 90 bp | GTTCCATCTGCAAGGTTAAGAGCGAAAGCAGCTCCCGCCGCGGCCTaGCGGTACCGGGAAGACCCTGCAGAGCGAGGGAGCCGGGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VPSARLRAKAAPAAA*RYREDPAERGSRGA Trigger: CGCTCCCCGGCTCCCTCGCTCTGCAGGGTCTTCCCGGTACCGGCAGGCCGCGGCGGGAGCTGCTTTCGCTCTTAACCTTGCAGATGGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS GCA 90 bp | CTTTTAATCTGTTCCATCGTGACACCGTACTTGAGCGCGATGCCCTaGAGCGTGTCGCCCGCGCGGACCCGGTGCTCCACATGGCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLICSIVTPYLSAMP*SVSPARTRCSTWRS Trigger: CGAGCGCCATGTGGAGCACCGGGTCCGCGCGGGCGACACGCTGCAGGGCATCGCGCTCAAGTACGGTGTCACGATGGAACAGATTAAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS TCA 90 bp | CTTCCGTGTCAGGATGCTCGCTCACAGGAATGCTCATCACAGGCTTaGAAGCCTTTGCCATCCACGCTCTCCGGAGCCCCGAGCGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPCQDARSQECSSQA*KPLPSTLSGAPSVS Trigger: GGAGACGCTCGGGGCTCCGGAGAGCGTGGATGGCAAAGGCTTTCAAGCCTGTGATGAGCATTCCTGTGAGCGAGCATCCTGACACGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS CCA 90 bp | ACACTTCCTCAGGCTGCACAGGCTGAACATCAGATTCTTGAGGACTaGGAGGAGGGAGGTCTTCCCCGGCCACCACTGGCTCCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TLPQAAQAEHQILED*EEGGLPRPPLAPLP Trigger: AGGAAGAGGAGCCAGTGGTGGCCGGGGAAGACCTCCCTCCTCCCAGTCCTCAAGAATCTGATGTTCAGCCTGTGCAGCCTGAGGAAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS-3UTR CAA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTCCGTACGAGCGGGTCTaGGTGCGGGCCAGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVQLQQVELPSYDFKMDTPYERV*VRARLS Trigger: GCTGAGCCTGGCCCGCACCAAGACCCGCTCGTACGG...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR CAA 90 bp | ATTATAGAAAGCCAGAGGGAACTAATCACTTCAGTGCAACTGCAGCAGGTAGAATGGACCCCTGCTCCATaGGCGATAGAGCCCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IIESQRELITSVQLQQVEWTPAP*AIEPWQ Trigger: CTGCCAGGGCTCTATCGCCAATGGAGCAGGGGTCCA...TTCTACCTGCTGCAGTTGCACTGAAGTGATTAGTTCCCTCTGGCTTTCTATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS-3UTR CAA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTATCGTGACACCGTACTaGAGCGCGATGCCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVQLQQVELPSYDFKMDTIVTPY*SAMPCS Trigger: GCTGCAGGGCATCGCGCTCAAGTACGGTGTCACGAT...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS-3UTR CAA 90 bp | TCAGTGCAACTGCAGCAGGTAGAACTACCTAGTTATGATTTTAAGATGGACACTGCTCTGCCTCCTTTATaGATTCCCCAGCAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVQLQQVELPSYDFKMDTALPPL*IPQQEP Trigger: TGGCTCCTGCTGGGGAATCAATAAAGGAGGCAGAGC...AGTGTCCATCTTAAAATCATAACTAGGTAGTTCTACCTGCTGCAGTTGCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS GCA 90 bp | CTCTCTTCTTTTAGCTTCTTGGCTGCCTGTGTTGATAACTTAATCTaGAAGTCAAGTCTCTGCAGGAAATCTCTGGCTGACACTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSFSFLAACVDNLI*KSSLCRKSLADTSS Trigger: TGAGGAAGTGTCAGCCAGAGATTTCCTGCAGAGACTTGACTTGCAGATTAAGTTATCAACACAGGCAGCCAAGAAGCTAAAAGAAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS CCA 90 bp | TGGCTCCTCTTCCTGAGAAAAACTGTTATCAGCAGTTTCATTTTCTaGAGAATCAATGGAGTTAAGTCCATTAAACAACAAAGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLLFLRKTVISSFIF*RINGVKSIKQQRLL Trigger: GAGAAGCCTTTGTTGTTTAATGGACTTAACTCCATTGATTCTCCAGAAAATGAAACTGCTGATAACAGTTTTTCTCAGGAAGAGGAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000560491.2 |
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| CDS GCA 72 bp | CCGCGGCGCGCGGGGGCCGCCTTCCCGCAGGGACAGTaGGGGCGAGGAATCCGCCATGGGTCCTGCCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRRAGAAFPQGQ*GRGIRHGSCRG Trigger: GCCTCGGCAGGACCCATGGCGGATTCCTCGCCCGCACTGTCCCTGCGGGAAGGCGGCCCCCGCGCGCCGCGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS GCA 72 bp | CGCCGGCGCCCAGCGGCGCCCGCACGCTGGCGGTGCTaGCGTACGAGCGGGTCTTGGTGCGGGCCAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRRPAAPARWRC*RTSGSWCGPGS Trigger: TGAGCCTGGCCCGCACCAAGACCCGCTCGTACGGCAGCACCGCCAGCGTGCGGGCGCCGCTGGGCGCCGGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS CCA 72 bp | TGCAGCGTGTCGCCCGCGCGGACCCGGTGCTCCACATaGCGCTCGATGACGCCGGCGCCCAGCGGCGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CSVSPARTRCST*RSMTPAPSGAR Trigger: GCGGGCGCCGCTGGGCGCCGGCGTCATCGAGCGCCATGTGGAGCACCGGGTCCGCGCGGGCGACACGCTGCA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267838.7 |
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| CDS GCA 72 bp | GCGATGCCCTGCAGCGTGTCGCCCGCGCGGACCCGGTaGTCCACATGGCGCTCGATGACGCCGGCGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AMPCSVSPARTR*STWRSMTPAPS Trigger: GCTGGGCGCCGGCGTCATCGAGCGCCATGTGGAGCACCGGGTCCGCGCGGGCGACACGCTGCAGGGCATCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267838.7 |
||
| CDS GCA 72 bp | AGCTCCCGCCGCGGCCTGCCGGTACCGGGAAGACCCTaGAGAGCGAGGGAGCCGGGGAGCGCTGAAGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRRGLPVPGRP*RAREPGSAEAR Trigger: GCGGGCTTCAGCGCTCCCCGGCTCCCTCGCTCTGCAGGGTCTTCCCGGTACCGGCAGGCCGCGGCGGGAGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560491.2 |
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| CDS CAA 72 bp | GCCCGCACGCTGGCGGTGCTGCCGTACGAGCGGGTCTaGGTGCGGGCCAGGCTCAGCGACAGCTCGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARTLAVLPYERV*VRARLSDSSAS Trigger: GGAGGCCGAGCTGTCGCTGAGCCTGGCCCGCACCAAGACCCGCTCGTACGGCAGCACCGCCAGCGTGCGGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267838.7 |
||
| CDS GCA 72 bp | GCACGCTGGCGGTGCTGCCGTACGAGCGGGTCTTGGTaGGGGCCAGGCTCAGCGACAGCTCGGCCTCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ARWRCCRTSGSW*GPGSATARPPR Trigger: CCGAGGAGGCCGAGCTGTCGCTGAGCCTGGCCCGCACCAAGACCCGCTCGTACGGCAGCACCGCCAGCGTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
||
| CDS CCA 72 bp | CCCGCACGCTGGCGGTGCTGCCGTACGAGCGGGTCTTaGTGCGGGCCAGGCTCAGCGACAGCTCGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PARWRCCRTSGS*CGPGSATARPP Trigger: AGGAGGCCGAGCTGTCGCTGAGCCTGGCCCGCACCAAGACCCGCTCGTACGGCAGCACCGCCAGCGTGCGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267838.7 |
||
| CDS CAA 72 bp | GCAGGCGTCCTAGGCCCCAGGTGGACCCCTGCTCCATaGGCGATAGAGCCCTGGCAGAACCCTGCCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGVLGPRWTPAP*AIEPWQNPALA Trigger: GGCCAGGGCAGGGTTCTGCCAGGGCTCTATCGCCAATGGAGCAGGGGTCCACCTGGGGCCTAGGACGCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560491.2 |
||
| CDS GCA 72 bp | GCAAGGTTAAGAGCGAAAGCAGCTCCCGCCGCGGCCTaGCGGTACCGGGAAGACCCTGCAGAGCGAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ARLRAKAAPAAA*RYREDPAERGS Trigger: GCTCCCTCGCTCTGCAGGGTCTTCCCGGTACCGGCAGGCCGCGGCGGGAGCTGCTTTCGCTCTTAACCTTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560491.2 |
||
| CDS GCA 72 bp | TGTTCCATCGTGACACCGTACTTGAGCGCGATGCCCTaGAGCGTGTCGCCCGCGCGGACCCGGTGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: CSIVTPYLSAMP*SVSPARTRCST Trigger: TGTGGAGCACCGGGTCCGCGCGGGCGACACGCTGCAGGGCATCGCGCTCAAGTACGGTGTCACGATGGAACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000267838.7 |
||
| CDS CAA 72 bp | TTGGCCCTTTTAATCTGTTCCATCGTGACACCGTACTaGAGCGCGATGCCCTGCAGCGTGTCGCCCGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LALLICSIVTPY*SAMPCSVSPAR Trigger: CCGCGCGGGCGACACGCTGCAGGGCATCGCGCTCAAGTACGGTGTCACGATGGAACAGATTAAAAGGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000267838.7 |
||
| CDS CAA 90 bp | GCTTCCGTGTCAGGATGCTCGCTCACAGGAATGCTCATCACAGGCTaGAAAGCCTTTGCCATCCACGCTCTCCGGAGCCCCGAGCGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASVSGCSLTGMLITG*KAFAIHALRSPERL Trigger: GAGACGCTCGGGGCTCCGGAGAGCGTGGATGGCAAAGGCTTTCAAGCCTGTGATGAGCATTCCTGTGAGCGAGCATCCTGACACGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
||
| CDS TCA 72 bp | CAGGATGCTCGCTCACAGGAATGCTCATCACAGGCTTaGAAGCCTTTGCCATCCACGCTCTCCGGAGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QDARSQECSSQA*KPLPSTLSGAP Trigger: CGGGGCTCCGGAGAGCGTGGATGGCAAAGGCTTTCAAGCCTGTGATGAGCATTCCTGTGAGCGAGCATCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
||
| CDS CCA 72 bp | AGGACTGGGAGGAGGGAGGTCTTCCCCGGCCACCACTaGCTCCTCTTCCTGAGAAAAACTGTTATCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTGRREVFPGHH*LLFLRKTVISS Trigger: ACTGCTGATAACAGTTTTTCTCAGGAAGAGGAGCCAGTGGTGGCCGGGGAAGACCTCCCTCCTCCCAGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS GCA 72 bp | TCTGAGACCGCTCTCAACGCGGCTTCCGTGTCAGGATaGTCGCTCACAGGAATGCTCATCACAGGCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SETALNAASVSG*SLTGMLITGLK Trigger: TTTCAAGCCTGTGATGAGCATTCCTGTGAGCGAGCATCCTGACACGGAAGCCGCGTTGAGAGCGGTCTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454181.6 ENST00000558126.1 |
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| CDS TCA 72 bp | AATCTGCAAGTCAAGTCTCTGCAGGAAATCTCTGGCTaGCACTTCCTCAGGCTGCACAGGCTGAACATCAGA | + |
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Preference number: 6 (lower is better) Translates to: NLQVKSLQEISG*HFLRLHRLNIR Trigger: TCTGATGTTCAGCCTGTGCAGCCTGAGGAAGTGTCAGCCAGAGATTTCCTGCAGAGACTTGACTTGCAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS GCA 72 bp | GCCTGTGTTGATAACTTAATCTGCAAGTCAAGTCTCTaGAGGAAATCTCTGGCTGACACTTCCTCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ACVDNLICKSSL*RKSLADTSSGC Trigger: GCAGCCTGAGGAAGTGTCAGCCAGAGATTTCCTGCAGAGACTTGACTTGCAGATTAAGTTATCAACACAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS GCA 72 bp | ATGCCCCCAAATCACCTAACTGTGATAGAGGGAAGTTaGATAGGGACTTTCTTCATCTCTGCTCTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: MPPNHLTVIEGS*IGTFFISALFF Trigger: AAAGAAGAGAGCAGAGATGAAGAAAGTCCCTATGCAACTTCCCTCTATCACAGTTAGGTGATTTGGGGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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| CDS CAA 90 bp | AATCTTCAGTTGTTGGATTCTTTATGGTCCAAACATATCTTAATTTaGGTTAGAGTTATGCCCCCAAATCACCTAACTGTGATAGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: NLQLLDSLWSKHILI*VRVMPPNHLTVIEG Trigger: TCCCTCTATCACAGTTAGGTGATTTGGGGGCATAACTCTAACCAAAATTAAGATATGTTTGGACCATAAAGAATCCAACAACTGAAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000267838.7 ENST00000454181.6 ENST00000558126.1 ENST00000560491.2 |
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