RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYRM9 (Homo sapiens)

Ensembl gene IDs: ENSG00000232859

Ensembl transcript IDs: ENST00000379102.8, ENST00000379103.7, ENST00000460380.6, ENST00000503642.1, ENST00000508816.1, ENST00000508862.5, ENST00000582343.1

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGAGTCCCCCGCCAGGACAGCTTCCCTCTCTGCGGCATCACAGTaGCACCGCCGGCTCTGGCACTATAGCTTTCCCTCCTTCTTCCTG +
Preference number: 1 (lower is better)
Translates to: RESPARTASLSAASQ*HRRLWHYSFPSFFL
Trigger: CAGGAAGAAGGAGGGAAAGCTATAGTGCCAGAGCCGGCGGTGGCACTGTGATGCCGCAGAGAGGGAAGCTGTCCTGGCGGGGGACTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR GCA 90 bp AGTGCCACCGCCGGCTCTGGCACTATAGCTTTCCCTCCTTCTTCCTaGTGCCCCCTCTCAGCTCGATCAGCACTGTTGGGCAGAAATTTG +
Preference number: 1 (lower is better)
Translates to: SATAGSGTIAFPPSS*CPLSARSALLGRNL
Trigger: CAAATTTCTGCCCAACAGTGCTGATCGAGCTGAGAGGGGGCAGCAGGAAGAAGGAGGGAAAGCTATAGTGCCAGAGCCGGCGGTGGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR GCA 90 bp GAGGACTCTGGAGAAATCTCAGGCCTCCATCATCTGGACCTCACCTaGCTCCTGCAGGGGCTTCTTGGAGGTGGTGAAACCCAAGCAGGA +
Preference number: 1 (lower is better)
Translates to: EDSGEISGLHHLDLT*LLQGLLGGGETQAG
Trigger: TCCTGCTTGGGTTTCACCACCTCCAAGAAGCCCCTGCAGGAGGCAGGTGAGGTCCAGATGATGGAGGCCTGAGATTTCTCCAGAGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR GCA 90 bp GGGCAGGACGGCTTCCTTGAAGGGAGCCCTTCAGGCACTGTCATGTaGCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCT +
Preference number: 1 (lower is better)
Translates to: GQDGFLEGSPSGTVM*HILCEALHLHLIAS
Trigger: AGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGACAGTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR CCA 90 bp CGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTaGGACTCAGAGAATGATAAAGAGATCTCCAGAATAAATGAATCA +
Preference number: 1 (lower is better)
Translates to: RAFFCTGCYLRGHLL*DSENDKEISRINES
Trigger: TGATTCATTTATTCTGGAGATCTCTTTATCATTCTCTGAGTCCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
3UTR-3UTR TCA 90 bp GCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACATCTGGCCGTTCTCCCTaGGCCCACCCACCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: ALASLLGSCGGHFTTSRTSGRSP*AHPPSP
Trigger: GGGAGAAGGTGGGTGGGCTCAGGGAGAACGGCCAGA...TGTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR TCA 90 bp CTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTCAGTTTTGTTTGCAGGACGGCTTCCTTaGAGGGAGCCCTTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: LSTSRGQEGSPSELSVLFAGRLP*REPFRH
Trigger: GTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTGC...AAACAAAACTGAGAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR GCA 90 bp AAACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGTCTGCGGCATCACAGTaGCACCGCCGGCTCTGGCAC +
Preference number: 2 (lower is better)
Translates to: KPTCFLLYRLLPEGTSALSAASQ*HRRLWH
Trigger: GTGCCAGAGCCGGCGGTGGCACTGTGATGCCGCAGA...CAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR CCA 90 bp CTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTCAGTTTTGTTTAGGGAAGCAGCTGGCTaGTGGCCTCCTCCACAGGGA +
Preference number: 2 (lower is better)
Translates to: LSTSRGQEGSPSELSVLFREAAG*WPPPQG
Trigger: TCCCTGTGGAGGAGGCCACCAGCCAGCTGCTTCCCT...AAACAAAACTGAGAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR CCA 90 bp GTGAAACCCAAGCAGGAGGCACTGGGCAGCCAAATCTCTAGTTCATGCCTGGACAGGATGCTAGCAACATaGCCGCGGCAAGAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: VKPKQEALGSQISSSCLDRMLAT*PRQEEP
Trigger: AGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCT...GTCCAGGCATGAACTAGAGATTTGGCTGCCCAGTGCCTCCTGCTTGGGTTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR TCA 90 bp AAACCCAAGCAGGAGGCACTGGGCAGCCAAATCTCTAGTTCATGCCTGGACTCCGTGCCACATCCTGTGTaGGGCACTTCACCTTCATCT +
Preference number: 2 (lower is better)
Translates to: KPKQEALGSQISSSCLDSVPHPV*GTSPSS
Trigger: AGATGAAGGTGAAGTGCCTCACACAGGATGTGGCAC...GGAGTCCAGGCATGAACTAGAGATTTGGCTGCCCAGTGCCTCCTGCTTGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR CCA 90 bp TGCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACGCAGGGAAGTGCCAGTaGAAAGAGACTGCAGGTGCA +
Preference number: 2 (lower is better)
Translates to: CFGVSPWFMWWALHHFKDAGKCQ*KETAGA
Trigger: TGCACCTGCAGTCTCTTTCCACTGGCACTTCCCTGC...GTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR TCA 90 bp AACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGGGTCAGCTTCTCCCCTaGTTTCTGGCTTTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: NPRAFFCTGCYLRGHLLWGQLLP*FLAFSQ
Trigger: TTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACC...CCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
3UTR-3UTR TCA 90 bp TTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGTACAGGTTGCTACCTaGGGGGACATCTGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: FSPDFWLSANKANGSSKPVQVAT*GDICSG
Trigger: CCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTAC...TGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
3UTR-3UTR CCA 90 bp CAGGACGGCTTCCTTGAAGGGAGCCCTTCAGGCACTGTCATGTGCCACATCCTGAGGGGACATCTGCTCTaGGACTCAGAGAATGATAAA +
Preference number: 2 (lower is better)
Translates to: QDGFLEGSPSGTVMCHILRGHLL*DSENDK
Trigger: TTTATCATTCTCTGAGTCCCAGAGCAGATGTCCCCT...CAGGATGTGGCACATGACAGTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CCA 90 bp GCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACACAGAGAGATTCGAAGTaGAGGAGGGAAGCCAACAGG +
Preference number: 2 (lower is better)
Translates to: ALASLLGSCGGHFTTSRTQRDSK*RREANR
Trigger: CCTGTTGGCTTCCCTCCTCCACTTCGAATCTCTCTG...TGTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR TCA 90 bp AAACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGGTCAGCTTCTCCCCTaGTTTCTGGCTTTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: KPTCFLLYRLLPEGTSALGQLLP*FLAFSQ
Trigger: TTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACC...CAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
3UTR-3UTR TCA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTGTGCCACATCCTGTGTaGGGCACTTCACCTTCATCT +
Preference number: 2 (lower is better)
Translates to: KVSFSPDFWLSANKANGSVPHPV*GTSPSS
Trigger: AGATGAAGGTGAAGTGCCTCACACAGGATGTGGCAC...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CCA 90 bp GCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACATCTCCTTGGTTCATGTaGTGGGCACTTCACCACTTC +
Preference number: 2 (lower is better)
Translates to: ALASLLGSCGGHFTTSRTSPWFM*WALHHF
Trigger: GAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGA...TGTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR TCA 90 bp TTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAACTCACTCTGGAGAGTaGGTTAGAAGGACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: FSPDFWLSANKANGSSKPTHSGE*VRRTGR
Trigger: CCTCCCTGTCCTTCTAACTCACTCTCCAGAGTGAGT...TGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR CCA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTCCTTGGTTCATGTGGTaGGCACTTCACCACTTCAAG +
Preference number: 2 (lower is better)
Translates to: KVSFSPDFWLSANKANGSPWFMW*ALHHFK
Trigger: CTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGG...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CCA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCTCCTTGGTTCATGTaGTGGGCACTTCACCACTTC +
Preference number: 2 (lower is better)
Translates to: KVSFSPDFWLSANKANGSSPWFM*WALHHF
Trigger: GAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGA...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR GCA 90 bp CAGGACGGCTTCCTTGAAGGGAGCCCTTCAGGCACTGTCATGTGCCACATCCTGTCACCTTCATCTTATTaGATCTGGGATTCAAATCCA +
Preference number: 2 (lower is better)
Translates to: QDGFLEGSPSGTVMCHILSPSSY*IWDSNP
Trigger: TGGATTTGAATCCCAGATGCAATAAGATGAAGGTGA...CAGGATGTGGCACATGACAGTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CCA 90 bp TCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGAAGGATGCTAGCAACATaGCCGCGGCAAGAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: SCVRHFTFILLHLGFKSRRMLAT*PRQEEP
Trigger: AGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCT...TCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CCA 90 bp GGCACTGTCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCAAAGGACAGGGAGGTATaGTCACACTCCAACTCTCTA +
Preference number: 2 (lower is better)
Translates to: GTVMCHILCEALHLHLIAKDREV*SHSNSL
Trigger: TAGAGAGTTGGAGTGTGACCATACCTCCCTGTCCTT...TGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGACAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR GCA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTGTTCTAAAACCCACGTaGTTTCTTCTGTACAGGTTG +
Preference number: 2 (lower is better)
Translates to: KVSFSPDFWLSANKANGSVLKPT*FLLYRL
Trigger: CAACCTGTACAGAAGAAAGCACGTGGGTTTTAGAAC...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
3UTR-3UTR CCA 90 bp TTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAAGGGGACATCTGCTCTaGGACTCAGAGAATGATAAA +
Preference number: 2 (lower is better)
Translates to: FSPDFWLSANKANGSSKPRGHLL*DSENDK
Trigger: TTTATCATTCTCTGAGTCCCAGAGCAGATGTCCCCT...TGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
3UTR-3UTR GCA 90 bp GGCACTGTCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCAATATATTTACTTCATTaGCAGCGGAGTACACTCGCA +
Preference number: 2 (lower is better)
Translates to: GTVMCHILCEALHLHLIAIYLLH*QRSTLA
Trigger: TGCGAGTGTACTCCGCTGGCAATGAAGTAAATATAT...TGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGACAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR GCA 90 bp TTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCATCACCTTCATCTTATTaGATCTGGGATTCAAATCCA +
Preference number: 2 (lower is better)
Translates to: FSPDFWLSANKANGSSKPSPSSY*IWDSNP
Trigger: TGGATTTGAATCCCAGATGCAATAAGATGAAGGTGA...TGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CCA 90 bp TCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGAAGGGGACATCTGCTCTaGGACTCAGAGAATGATAAA +
Preference number: 2 (lower is better)
Translates to: SCVRHFTFILLHLGFKSRRGHLL*DSENDK
Trigger: TTTATCATTCTCTGAGTCCCAGAGCAGATGTCCCCT...TCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR GCA 72 bp AGACAGGGAGTCCCCCGCCAGGACAGCTTCCCTCTCTaGGGCATCACAGTGCCACCGCCGGCTCTGGCACTA +
Preference number: 3 (lower is better)
Translates to: RQGVPRQDSFPL*GITVPPPALAL
Trigger: TAGTGCCAGAGCCGGCGGTGGCACTGTGATGCCGCAGAGAGGGAAGCTGTCCTGGCGGGGGACTCCCTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR CAA 90 bp GGCACTGTCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCAGGCAGGACGGCTTCCTaGAAGGGAGCCCTTCAGGCA +
Preference number: 3 (lower is better)
Translates to: GTVMCHILCEALHLHLIAGRTAS*KGALQA
Trigger: TGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTGCC...TGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGACAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CAA 90 bp GCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACATCCTGCAGGGGCTTCTaGGAGGTGGTGAAACCCAAG +
Preference number: 3 (lower is better)
Translates to: ALASLLGSCGGHFTTSRTSCRGF*EVVKPK
Trigger: CTTGGGTTTCACCACCTCCAAGAAGCCCCTGCAGGA...TGTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR CAA 90 bp AGGGGCAGGAGGACTCTGGAGAAATCTCAGGCCTCCATCATCTGGACCTCACCTTTTCTTCTGTACAGGTaGCTACCTGAGGGGACATCT +
Preference number: 3 (lower is better)
Translates to: RGRRTLEKSQASIIWTSPFLLYR*LPEGTS
Trigger: AGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAA...AGGTGAGGTCCAGATGATGGAGGCCTGAGATTTCTCCAGAGTCCTCCTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR CAA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTCTTTGGCGTCTCTCCTaGGTTCATGTGGTGGGCACT +
Preference number: 3 (lower is better)
Translates to: KVSFSPDFWLSANKANGSLWRLS*VHVVGT
Trigger: AGTGCCCACCACATGAACCAAGGAGAGACGCCAAAG...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CAA 90 bp TTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCACTTTGGCGTCTCTCCTaGGTTCATGTGGTGGGCACT +
Preference number: 3 (lower is better)
Translates to: FSPDFWLSANKANGSSKPLWRLS*VHVVGT
Trigger: AGTGCCCACCACATGAACCAAGGAGAGACGCCAAAG...TGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CAA 90 bp CAGGACGGCTTCCTTGAAGGGAGCCCTTCAGGCACTGTCATGTGCCACATCCTGTTCACCTTCATCTTATaGCATCTGGGATTCAAATCC +
Preference number: 3 (lower is better)
Translates to: QDGFLEGSPSGTVMCHILFTFIL*HLGFKS
Trigger: GGATTTGAATCCCAGATGCAATAAGATGAAGGTGAA...CAGGATGTGGCACATGACAGTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR TCA 72 bp TGGGGAGGGAGGATAGTGATAACTCACTCTGGAGAGTaGGTTAGAAGGACAGGGAGGTATGGTCACACTCCA +
Preference number: 3 (lower is better)
Translates to: WGGRIVITHSGE*VRRTGRYGHTP
Trigger: TGGAGTGTGACCATACCTCCCTGTCCTTCTAACTCACTCTCCAGAGTGAGTTATCACTATCCTCCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR CAA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTTTCTTCTGTACAGGTaGCTACCTGAGGGGACATCT +
Preference number: 3 (lower is better)
Translates to: KVSFSPDFWLSANKANGSFLLYR*LPEGTS
Trigger: AGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAA...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
3UTR-3UTR CAA 90 bp TGCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACGATATATTTACTTCATaGCCAGCGGAGTACACTCGC +
Preference number: 3 (lower is better)
Translates to: CFGVSPWFMWWALHHFKDDIFTS*PAEYTR
Trigger: GCGAGTGTACTCCGCTGGCAATGAAGTAAATATATC...GTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR-3UTR CAA 90 bp TTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCAACCAGAAGGGATTaGTCTTCACCTTTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: FSPDFWLSANKANGSSKPATRRD*SSPFSF
Trigger: GAAGCTGAAAGGTGAAGACAAATCCCTTCTGGTTGC...TGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
3UTR-3UTR CAA 90 bp GGCACTGTCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATTCACCTTCATCTTATaGCATCTGGGATTCAAATCC +
Preference number: 3 (lower is better)
Translates to: GTVMCHILCEALHLHLIAFTFIL*HLGFKS
Trigger: GGATTTGAATCCCAGATGCAATAAGATGAAGGTGAA...TGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGACAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR CCA 72 bp TTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTaGGACTCAGAGAATGATAAAGAGATCTCCAGAATA +
Preference number: 3 (lower is better)
Translates to: FCTGCYLRGHLL*DSENDKEISRI
Trigger: TATTCTGGAGATCTCTTTATCATTCTCTGAGTCCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
3UTR-3UTR CAA 90 bp ACGTATGGTTTATCAGTTGAGAAGACACACGAGCTTCCACAAATTGATATATTTAGGAAAAGCAGCTCCTaGGCAGACTGCTGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: TYGLSVEKTHELPQIDIFRKSSS*ADCWVC
Trigger: ACACACCCAGCAGTCTGCCAAGGAGCTGCTTTTCCT...AAATATATCAATTTGTGGAAGCTCGTGTGTCTTCTCAACTGATAAACCATACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR TCA 90 bp CAGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCCAGCGGGGCCATCCGTaGGACCCTCTGTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QKRGLSTSRGQEGSPSELQRGHP*DPLSQP
Trigger: AGGCTGGGACAGAGGGTCTCACGGATGGCCCCGCTG...GAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000460380.6
ENST00000508862.5
CDS-3UTR GCA 90 bp CAGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTCTGCGGCATCACAGTaGCACCGCCGGCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QKRGLSTSRGQEGSPSELSAASQ*HRRLWH
Trigger: GTGCCAGAGCCGGCGGTGGCACTGTGATGCCGCAGA...GAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp GCCTCCTCCACAGGGACCATTCTCAACTGTGGGGCAGGAGTGGCCTCTAGTGGTTCTGGCCGTTCTCCCTaGGCCCACCCACCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ASSTGTILNCGAGVASSGSGRSP*AHPPSP
Trigger: GGGAGAAGGTGGGTGGGCTCAGGGAGAACGGCCAGA...ACCACTAGAGGCCACTCCTGCCCCACAGTTGAGAATGGTCCCTGTGGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CCA 90 bp CAGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCAGGGAAGCAGCTGGCTaGTGGCCTCCTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: QKRGLSTSRGQEGSPSELREAAG*WPPPQG
Trigger: TCCCTGTGGAGGAGGCCACCAGCCAGCTGCTTCCCT...GAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460380.6
ENST00000508862.5
CDS-3UTR GCA 90 bp GCCAGGACAGCTTCCCTCTCTGCGGCATCACAGTGCCACCGCCGGCTCTGGCACTCAGGCACTGTCATGTaGCACATCCTGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: ARTASLSAASQCHRRLWHSGTVM*HILCEA
Trigger: TGCCTCACACAGGATGTGGCACATGACAGTGCCTGA...GTGCCAGAGCCGGCGGTGGCACTGTGATGCCGCAGAGAGGGAAGCTGTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR GCA 90 bp CAGGACGGCTTCCTTGAAGGGAGCCCTTCAGGCACTGTCATGTGCCACATCCTGCCTCCGAACCAGTTCTaGTCCTGGCAGCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QDGFLEGSPSGTVMCHILPPNQF*SWQRGH
Trigger: ATGGCCCCGCTGCCAGGAGCAGAACTGGTTCGGAGG...CAGGATGTGGCACATGACAGTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp CAGGACGGCTTCCTTGAAGGGAGCCCTTCAGGCACTGTCATGTGCCACATCCTGACCCGATGCGGTGCATaGGGGGAGCAGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: QDGFLEGSPSGTVMCHILTRCGA*GEQSCA
Trigger: TGCACAGCTCTGCTCCCCGCATGCACCGCATCGGGT...CAGGATGTGGCACATGACAGTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp CAGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCAGGATGCTAGCAACATaGCCGCGGCAAGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QKRGLSTSRGQEGSPSELRMLAT*PRQEEP
Trigger: AGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCT...GAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR TCA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGTCTGGCCGTTCTCCCTaGGCCCACCCACCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLSGRSP*AHPPSP
Trigger: GGGAGAAGGTGGGTGGGCTCAGGGAGAACGGCCAGA...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp CAGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCGCAGGGAAGTGCCAGTaGAAAGAGACTGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: QKRGLSTSRGQEGSPSELAGKCQ*KETAGA
Trigger: TGCACCTGCAGTCTCTTTCCACTGGCACTTCCCTGC...GAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR TCA 90 bp AAACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGCAGCGGGGCCATCCGTaGGACCCTCTGTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KPTCFLLYRLLPEGTSALQRGHP*DPLSQP
Trigger: AGGCTGGGACAGAGGGTCTCACGGATGGCCCCGCTG...CAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000460380.6
ENST00000508862.5
CDS-3UTR TCA 90 bp CAGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCGGTCAGCTTCTCCCCTaGTTTCTGGCTTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: QKRGLSTSRGQEGSPSELGQLLP*FLAFSQ
Trigger: TTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACC...GAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR TCA 90 bp GGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTCAGTTTTGTACAGGTTGCTACCTaGGGGGACATCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GPLNFQRPGRLTLGALSFVQVAT*GDICSG
Trigger: CCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTAC...AAAACTGAGAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460380.6
ENST00000508862.5
CDS-3UTR TCA 90 bp GCAAACATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCAGCAGGACGGCTTCCTTaGAGGGAGCCCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ANIKDASNMAAARGASGAAGRLP*REPFRH
Trigger: GTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTGC...TGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTATGTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR TCA 90 bp TGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGGACTCAGACAGCGGGGCCATCCGTaGGACCCTCTGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CFLLYRLLPEGTSALGLRQRGHP*DPLSSL
Trigger: GAGGCTGGACAGAGGGTCTCACGGATGGCCCCGCTG...TCTGAGTCCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR GCA 90 bp GTGAAACCCAAGCAGGAGGCACTGGGCAGCCAAATCTCTAGTTCATGCCTGGACCCTCCGAACCAGTTCTaGTCCTGGCAGCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VKPKQEALGSQISSSCLDPPNQF*SWQRGH
Trigger: ATGGCCCCGCTGCCAGGAGCAGAACTGGTTCGGAGG...GTCCAGGCATGAACTAGAGATTTGGCTGCCCAGTGCCTCCTGCTTGGGTTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp TGCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACGCAGGACGGCTTCCTTaGAGGGAGCCCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: CFGVSPWFMWWALHHFKDAGRLP*REPFRH
Trigger: GTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTGC...GTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp GTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCCCTCCGAACCAGTTCTaGTCCTGGCAGCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VSFSPDFWLSANKANGSSPPNQF*SWQRGH
Trigger: ATGGCCCCGCTGCCAGGAGCAGAACTGGTTCGGAGG...GGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR GCA 90 bp CAGGACGGCTTCCTTGAAGGGAGCCCTTCAGGCACTGTCATGTGCCACATCCTGCCAGTGGAAAGAGACTaGAGGTGCACAGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QDGFLEGSPSGTVMCHILPVERD*RCTEAW
Trigger: CCAAGCCTCTGTGCACCTGCAGTCTCTTTCCACTGG...CAGGATGTGGCACATGACAGTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp AAACCCAAGCAGGAGGCACTGGGCAGCCAAATCTCTAGTTCATGCCTGGACTCCACCTCACCTGCCTCCTaGAGGGGCTTCTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KPKQEALGSQISSSCLDSTSPAS*RGFLEV
Trigger: CACCTCCAAGAAGCCCCTGCAGGAGGCAGGTGAGGT...GGAGTCCAGGCATGAACTAGAGATTTGGCTGCCCAGTGCCTCCTGCTTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CCA 90 bp CAGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTCTCCTTGGTTCATGTaGTGGGCACTTCACCACTTC +
Preference number: 4 (lower is better)
Translates to: QKRGLSTSRGQEGSPSELSPWFM*WALHHF
Trigger: GAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGA...GAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp AGAGGAGCCTCTGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACTGTGGGGCAGGAGTaGCCTCTAGTGGTCATGGGG +
Preference number: 4 (lower is better)
Translates to: RGASGARSASPLISGFQPTVGQE*PLVVMG
Trigger: CCCCATGACCACTAGAGGCCACTCCTGCCCCACAGT...TGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCAGAGGCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp AAACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGCAGGACGGCTTCCTTaGAGGGAGCCCTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KPTCFLLYRLLPEGTSALAGRLP*REPFRH
Trigger: GTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTGC...CAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp TGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGGACTCAGACCTCCGAACCAGTTCTaGTCCTGGCAGCGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CFLLYRLLPEGTSALGLRPPNQF*SWQRGH
Trigger: ATGGCCCCGCTGCCAGGAGCAGAACTGGTTCGGAGG...TCTGAGTCCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR GCA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATACCCGATGCGGTGCATaGGGGGAGCAGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: WSKVSFSPDFWLSANKANTRCGA*GEQSCA
Trigger: TGCACAGCTCTGCTCCCCGCATGCACCGCATCGGGT...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp GCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACAGACAGCTTCCCTCTCTaGGGCATCACAGTGCCACCG +
Preference number: 4 (lower is better)
Translates to: ALASLLGSCGGHFTTSRTDSFPL*GITVPP
Trigger: CGGTGGCACTGTGATGCCGCAGAGAGGGAAGCTGTC...TGTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CCA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGTCGGTAGAGCTGCAGTaGCCTCCGAACCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLSVELQ*PPNQFC
Trigger: GCAGAACTGGTTCGGAGGCCACTGCAGCTCTACCGA...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp GCAAACATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCAGGGGCAGGAGGACTCTaGAGAAATCTCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ANIKDASNMAAARGASGAGAGGL*RNLRPP
Trigger: TGGAGGCCTGAGATTTCTCCAGAGTCCTCCTGCCCC...TGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTATGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp GCAAACATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCAGCCAGTCTACATTCCTaGCTCACTCCCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ANIKDASNMAAARGASGAASLHS*LTPFLH
Trigger: GTGGAGGAAGGGAGTGAGTCAGGAATGTAGACTGGC...TGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTATGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR GCA 90 bp TTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCACCCTTGGTCGGCAGCTaGTGGCAACAGCGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FSPDFWLSANKANGSSKPPLVGS*WQQRSK
Trigger: CTTGCTGCGCTGTTGCCAGCAGCTGCCGACCAAGGG...TGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR GCA 90 bp TGCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACAAAACTGAGACCCGATaGGGTGCATGCGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CFGVSPWFMWWALHHFKDKTETR*GACGEQ
Trigger: CTGCTCCCCGCATGCACCGCATCGGGTCTCAGTTTT...GTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp GTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAAACTGAGACCCGATaGGGTGCATGCGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VSFSPDFWLSANKANGSSKTETR*GACGEQ
Trigger: CTGCTCCCCGCATGCACCGCATCGGGTCTCAGTTTT...GGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp ATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCAAGGTCAAGAGTCCATGGCAGCTaGTTTGGCGTCTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IKDASNMAAARGASGARSRVHGS*FGVSPW
Trigger: CCAAGGAGAGACGCCAAAGCAGCTGCCATGGACTCT...TGACCTTGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp AGAGGAGCCTCTGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAGAAAGAGACTGCAGGTaGACAGAGGCTTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: RGASGARSASPLISGFQPERDCR*TEAWTG
Trigger: GCCTGTCCAAGCCTCTGTGCACCTGCAGTCTCTTTC...TGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCAGAGGCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp AACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGTCGGTAGAGCTGCAGTaGCCTCCGAACCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NPRAFFCTGCYLRGHLLWSVELQ*PPNQFC
Trigger: GCAGAACTGGTTCGGAGGCCACTGCAGCTCTACCGA...CCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp GTGAAACCCAAGCAGGAGGCACTGGGCAGCCAAATCTCTAGTTCATGCCTGGACGCAGGGAAGTGCCAGTaGAAAGAGACTGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VKPKQEALGSQISSSCLDAGKCQ*KETAGA
Trigger: TGCACCTGCAGTCTCTTTCCACTGGCACTTCCCTGC...GTCCAGGCATGAACTAGAGATTTGGCTGCCCAGTGCCTCCTGCTTGGGTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CCA 90 bp GCAAACATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCATCTCTCTGCATCTTCTaGCCACTCTGGCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ANIKDASNMAAARGASGASLCIF*PLWPFS
Trigger: GGAGAACGGCCAGAGTGGCCAGAAGATGCAGAGAGA...TGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTATGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATTGCCACCGCCGGCTCTaGCACTATAGCTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: WSKVSFSPDFWLSANKANCHRRL*HYSFPS
Trigger: GGAGGGAAAGCTATAGTGCCAGAGCCGGCGGTGGCA...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CCA 90 bp GCCTCCTCCACAGGGACCATTCTCAACTGTGGGGCAGGAGTGGCCTCTAGTGGTAAGGACAGGGAGGTATaGTCACACTCCAACTCTCTA +
Preference number: 4 (lower is better)
Translates to: ASSTGTILNCGAGVASSGKDREV*SHSNSL
Trigger: TAGAGAGTTGGAGTGTGACCATACCTCCCTGTCCTT...ACCACTAGAGGCCACTCCTGCCCCACAGTTGAGAATGGTCCCTGTGGAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp TCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGACAGCGGGGCCATCCGTaGGACCCTCTGTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SCVRHFTFILLHLGFKSRQRGHP*DPLSQP
Trigger: AGGCTGGGACAGAGGGTCTCACGGATGGCCCCGCTG...TCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379102.8
ENST00000460380.6
CDS-3UTR TCA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGTACAGGTTGCTACCTaGGGGGACATCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WSKVSFSPDFWLSANKANVQVAT*GDICSG
Trigger: CCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTAC...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR TCA 90 bp AGAGGAGCCTCTGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAGTGCCACATCCTGTGTaGGGCACTTCACCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RGASGARSASPLISGFQPVPHPV*GTSPSS
Trigger: AGATGAAGGTGAAGTGCCTCACACAGGATGTGGCAC...TGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCAGAGGCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR TCA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGGTGCCACATCCTGTGTaGGGCACTTCACCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLVPHPV*GTSPSS
Trigger: AGATGAAGGTGAAGTGCCTCACACAGGATGTGGCAC...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp AGAGGAGCCTCTGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCATCAGGCACTGTCATGTaGCACATCCTGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RGASGARSASPLISGFQPSGTVM*HILCEA
Trigger: TGCCTCACACAGGATGTGGCACATGACAGTGCCTGA...TGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCAGAGGCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp TGCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACCCAGTGGAAAGAGACTaGAGGTGCACAGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CFGVSPWFMWWALHHFKDPVERD*RCTEAW
Trigger: CCAAGCCTCTGTGCACCTGCAGTCTCTTTCCACTGG...GTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATAGGATGCTAGCAACATaGCCGCGGCAAGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: WSKVSFSPDFWLSANKANRMLAT*PRQEEP
Trigger: AGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCT...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp AACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGTCTCTCTGCATCTTCTaGCCACTCTGGCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: NPRAFFCTGCYLRGHLLWSLCIF*PLWPFS
Trigger: GGAGAACGGCCAGAGTGGCCAGAAGATGCAGAGAGA...CCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TGCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACTCTCTCTGCATCTTCTaGCCACTCTGGCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CFGVSPWFMWWALHHFKDSLCIF*PLWPFS
Trigger: GGAGAACGGCCAGAGTGGCCAGAAGATGCAGAGAGA...GTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGACTAGTTCATCCCTGTaGCTGAGTGCCCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLTSSSL*LSALGE
Trigger: TTCCCCAAGGGCACTCAGCCACAGGGATGAACTAGT...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTACATCAGCCATGGTCTaGCGAGGGCACCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: KVSFSPDFWLSANKANGSTSAMV*RGHQAT
Trigger: TGTGGCTTGGTGCCCTCGCCAGACCATGGCTGATGT...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR CCA 90 bp AGAGGAGCCTCTGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCACAGAGAGATTCGAAGTaGAGGAGGGAAGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: RGASGARSASPLISGFQPQRDSK*RREANR
Trigger: CCTGTTGGCTTCCCTCCTCCACTTCGAATCTCTCTG...TGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCAGAGGCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp CTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTCAGTTTTGTTTGGTCAGCTTCTCCCCTaGTTTCTGGCTTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LSTSRGQEGSPSELSVLFGQLLP*FLAFSQ
Trigger: TTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACC...AAACAAAACTGAGAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460380.6
ENST00000508862.5
CDS-3UTR TCA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGAAAGCAGGAAGACCCTaGGGGGCAATCACTAGGAAA +
Preference number: 4 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLKAGRP*GAITRK
Trigger: TTTCCTAGTGATTGCCCCTCAGGGTCTTCCTGCTTT...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR TCA 90 bp AACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGACTCACTCTGGAGAGTaGGTTAGAAGGACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NPRAFFCTGCYLRGHLLWTHSGE*VRRTGR
Trigger: CCTCCCTGTCCTTCTAACTCACTCTCCAGAGTGAGT...CCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR GCA 90 bp CCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTAGAGTCCATGGCAGCTaGTTTGGCGTCTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PDFWLSANKANGSSKPAARVHGS*FGVSPW
Trigger: CCAAGGAGAGACGCCAAAGCAGCTGCCATGGACTCT...AGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp CCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGAAAGAGACTGCAGGTaGACAGAGGCTTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: PDFWLSANKANGSSKPAAERDCR*TEAWTG
Trigger: GCCTGTCCAAGCCTCTGTGCACCTGCAGTCTCTTTC...AGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATTTGGTCGGCAGCTGCTaGCAACAGCGCAGCAAGTAT +
Preference number: 4 (lower is better)
Translates to: WSKVSFSPDFWLSANKANLVGSC*QQRSKY
Trigger: ATACTTGCTGCGCTGTTGCCAGCAGCTGCCGACCAA...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTGCAGGGAAGTGCCAGTaGAAAGAGACTGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KVSFSPDFWLSANKANGSAGKCQ*KETAGA
Trigger: TGCACCTGCAGTCTCTTTCCACTGGCACTTCCCTGC...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCACTAGTTCATCCCTGTaGCTGAGTGCCCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SKVSFSPDFWLSANKANGTSSSL*LSALGE
Trigger: TTCCCCAAGGGCACTCAGCCACAGGGATGAACTAGT...GCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp AACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGACTAGTTCATCCCTGTaGCTGAGTGCCCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: NPRAFFCTGCYLRGHLLWTSSSL*LSALGE
Trigger: TTCCCCAAGGGCACTCAGCCACAGGGATGAACTAGT...CCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp AACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGGTCCAGCCTCATCCCTaGCGTCTTCTTTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: NPRAFFCTGCYLRGHLLWVQPHP*RLLSGT
Trigger: AGTTCCAGAAAGAAGACGCCAGGGATGAGGCTGGAC...CCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR CCA 90 bp CTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTCAGTTTTGTTTCCAAGCAGGAGGCACTaGGCAGCCAAATCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: LSTSRGQEGSPSELSVLFPSRRH*AAKSLV
Trigger: AACTAGAGATTTGGCTGCCCAGTGCCTCCTGCTTGG...AAACAAAACTGAGAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp AGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCCCCGAAAACTCTGCCTaGCAGCATGCTTGTAATGCT +
Preference number: 4 (lower is better)
Translates to: SKVSFSPDFWLSANKANGPENSA*QHACNA
Trigger: AGCATTACAAGCATGCTGTCAGGCAGAGTTTTCGGG...GCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR TCA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTGGTCAGCTTCTCCCCTaGTTTCTGGCTTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: KVSFSPDFWLSANKANGSGQLLP*FLAFSQ
Trigger: TTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACC...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR TCA 90 bp AAACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGTGCCACATCCTGTGTaGGGCACTTCACCTTCATCT +
Preference number: 4 (lower is better)
Translates to: KPTCFLLYRLLPEGTSALVPHPV*GTSPSS
Trigger: AGATGAAGGTGAAGTGCCTCACACAGGATGTGGCAC...CAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR TCA 90 bp ATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCAAGGTCAGAATGCCTACAGGCCTaGGCCCTTTCCTACTTTATT +
Preference number: 4 (lower is better)
Translates to: IKDASNMAAARGASGARSECLQA*ALSYFI
Trigger: AATAAAGTAGGAAAGGGCTCAGGCCTGTAGGCATTC...TGACCTTGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR GCA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATTCAGGCACTGTCATGTaGCACATCCTGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: WSKVSFSPDFWLSANKANSGTVM*HILCEA
Trigger: TGCCTCACACAGGATGTGGCACATGACAGTGCCTGA...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp TCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGAACCCGATGCGGTGCATaGGGGGAGCAGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SCVRHFTFILLHLGFKSRTRCGA*GEQSCA
Trigger: TGCACAGCTCTGCTCCCCGCATGCACCGCATCGGGT...TCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATCGGTAGAGCTGCAGTaGCCTCCGAACCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SCATSCVRHFTFILLHLGSVELQ*PPNQFC
Trigger: GCAGAACTGGTTCGGAGGCCACTGCAGCTCTACCGA...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp GCTCGATCAGCACTGTTGGGCAGAAATTTGCCTTTAAGGATGAAGAGTGAGAGCTCGGTAGAGCTGCAGTaGCCTCCGAACCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ARSALLGRNLPLRMKSESSVELQ*PPNQFC
Trigger: GCAGAACTGGTTCGGAGGCCACTGCAGCTCTACCGA...GCTCTCACTCTTCATCCTTAAAGGCAAATTTCTGCCCAACAGTGCTGATCGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CCA 90 bp CAGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTCATCTTATTGCATCTaGGATTCAAATCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: QKRGLSTSRGQEGSPSELSSYCI*DSNPDL
Trigger: CAGATCTGGATTTGAATCCCAGATGCAATAAGATGA...GAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TGCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACCCTTGGTTCATGTGGTaGGCACTTCACCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: CFGVSPWFMWWALHHFKDPWFMW*ALHHFK
Trigger: CTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGG...GTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp GTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCTTTGGCGTCTCTCCTTaGTTCATGTGGTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: VSFSPDFWLSANKANGSSFGVSP*FMWWAL
Trigger: AAGTGCCCACCACATGAACCAAGGAGAGACGCCAAA...GGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp AGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTATACTTTCAGCTTCTaGAGGAGGGAAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SKVSFSPDFWLSANKANGYTFSF*RREAAG
Trigger: GCCAGCTGCTTCCCTCCTCCAGAAGCTGAAAGTATA...GCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508862.5
CDS-3UTR TCA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTCCCGAAAACTCTGCCTaGCAGCATGCTTGTAATGCT +
Preference number: 4 (lower is better)
Translates to: KVSFSPDFWLSANKANGSPENSA*QHACNA
Trigger: AGCATTACAAGCATGCTGTCAGGCAGAGTTTTCGGG...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR TCA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGAACTTCAAGTGGTGCATaGGTAGGTGTCCCTCACCGG +
Preference number: 4 (lower is better)
Translates to: SCATSCVRHFTFILLHLGTSSGA*VGVPHR
Trigger: CCGGTGAGGGACACCTACTCATGCACCACTTGAAGT...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR CCA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGAGGGGACATCTGCTCTaGGACTCAGAGAATGATAAA +
Preference number: 4 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLRGHLL*DSENDK
Trigger: TTTATCATTCTCTGAGTCCCAGAGCAGATGTCCCCT...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp AGAGGAGCCTCTGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAAGGGGACATCTGCTCTaGGACTCAGAGAATGATAAA +
Preference number: 4 (lower is better)
Translates to: RGASGARSASPLISGFQPRGHLL*DSENDK
Trigger: TTTATCATTCTCTGAGTCCCAGAGCAGATGTCCCCT...TGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCAGAGGCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp TGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGGACTCAGACCTTGGTTCATGTGGTaGGCACTTCACCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: CFLLYRLLPEGTSALGLRPWFMW*ALHHFK
Trigger: CTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGG...TCTGAGTCCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp CCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTCCTTGGTTCATGTGGTaGGCACTTCACCACTTCAAG +
Preference number: 4 (lower is better)
Translates to: PDFWLSANKANGSSKPAAPWFMW*ALHHFK
Trigger: CTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGG...AGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TGCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACGAACTCAACTTCAAGTaGTGCATGAGTAGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: CFGVSPWFMWWALHHFKDELNFK*CMSRCP
Trigger: GGGACACCTACTCATGCACCACTTGAAGTTGAGTTC...GTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379103.7
3UTR CAA 72 bp TCTTCCTGCTGCCCCCTCTCAGCTCGATCAGCACTGTaGGGCAGAAATTTGCCTTTAAGGATGAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SSCCPLSARSAL*GRNLPLRMKSE
Trigger: CTCACTCTTCATCCTTAAAGGCAAATTTCTGCCCAACAGTGCTGATCGAGCTGAGAGGGGGCAGCAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGAGGTCAGCTTCTCCCCTaGTTTCTGGCTTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SCATSCVRHFTFILLHLGGQLLP*FLAFSQ
Trigger: TTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACC...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR TCA 90 bp TCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGAGTACAGGTTGCTACCTaGGGGGACATCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SCVRHFTFILLHLGFKSRVQVAT*GDICSG
Trigger: CCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTAC...TCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR TCA 90 bp GTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCGTATGGTTTATCAGTTaGGAAGACACACGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSFSPDFWLSANKANGSSVWFIS*EDTRAS
Trigger: GGAAGCTCGTGTGTCTTCTCAACTGATAAACCATAC...GGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR TCA 90 bp AGAGGAGCCTCTGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCACACCTACTTTGTTCATaGTCCAGTCAGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: RGASGARSASPLISGFQPHLLCS*SSQHLQ
Trigger: TTGAAGATGCTGACTGGATCATGAACAAAGTAGGTG...TGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCAGAGGCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTTAAGGATGAAGAGTaGGAGCCCCTCCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: SCATSCVRHFTFILLHLGFKDEE*EPLPTC
Trigger: GCAAGTGGGGAGGGGCTCTCACTCTTCATCCTTAAA...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR GCA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGGTTCTAAAACCCACGTaGTTTCTTCTGTACAGGTTG +
Preference number: 4 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLVLKPT*FLLYRL
Trigger: CAACCTGTACAGAAGAAAGCACGTGGGTTTTAGAAC...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp CAGGACGGCTTCCTTGAAGGGAGCCCTTCAGGCACTGTCATGTGCCACATCCTGCTTTTAATAATCTGCTaGATTCTCTCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: QDGFLEGSPSGTVMCHILLLIIC*ILSGLS
Trigger: AGACAACCCTGAGAGAATCCAGCAGATTATTAAAAG...CAGGATGTGGCACATGACAGTGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCATTTGGCGTCTCTCCTTaGTTCATGTGGTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: FSPDFWLSANKANGSSKPFGVSP*FMWWAL
Trigger: AAGTGCCCACCACATGAACCAAGGAGAGACGCCAAA...TGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp ATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCAAGGTCAGCTCTTTTAATAATCTaGTGGATTCTCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: IKDASNMAAARGASGARSALLII*WILSGL
Trigger: CAACCCTGAGAGAATCCAGCAGATTATTAAAAGAGC...TGACCTTGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR GCA 90 bp GCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACAGTTCTAAAACCCACGTaGTTTCTTCTGTACAGGTTG +
Preference number: 4 (lower is better)
Translates to: ALASLLGSCGGHFTTSRTVLKPT*FLLYRL
Trigger: CAACCTGTACAGAAGAAAGCACGTGGGTTTTAGAAC...TGTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp TCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGAGAAAGAGACTGCAGGTaGACAGAGGCTTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: SCVRHFTFILLHLGFKSRERDCR*TEAWTG
Trigger: GCCTGTCCAAGCCTCTGTGCACCTGCAGTCTCTTTC...TCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp TCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGACCAGTGGAAAGAGACTaGAGGTGCACAGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SCVRHFTFILLHLGFKSRPVERD*RCTEAW
Trigger: CCAAGCCTCTGTGCACCTGCAGTCTCTTTCCACTGG...TCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATAGGGGACATCTGCTCTaGGACTCAGAGAATGATAAA +
Preference number: 4 (lower is better)
Translates to: WSKVSFSPDFWLSANKANRGHLL*DSENDK
Trigger: TTTATCATTCTCTGAGTCCCAGAGCAGATGTCCCCT...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp AAACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGAGGGGACATCTGCTCTaGGACTCAGAGAATGATAAA +
Preference number: 4 (lower is better)
Translates to: KPTCFLLYRLLPEGTSALRGHLL*DSENDK
Trigger: TTTATCATTCTCTGAGTCCCAGAGCAGATGTCCCCT...CAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATCTCCTTGGTTCATGTaGTGGGCACTTCACCACTTC +
Preference number: 4 (lower is better)
Translates to: SCATSCVRHFTFILLHLGSPWFM*WALHHF
Trigger: GAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGA...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp GCTCGATCAGCACTGTTGGGCAGAAATTTGCCTTTAAGGATGAAGAGTGAGAGCTTTGGCGTCTCTCCTTaGTTCATGTGGTGGGCACTT +
Preference number: 4 (lower is better)
Translates to: ARSALLGRNLPLRMKSESFGVSP*FMWWAL
Trigger: AAGTGCCCACCACATGAACCAAGGAGAGACGCCAAA...GCTCTCACTCTTCATCCTTAAAGGCAAATTTCTGCCCAACAGTGCTGATCGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR TCA 90 bp ACGTATGGTTTATCAGTTGAGAAGACACACGAGCTTCCACAAATTGATATATTTTCTGGCCGTTCTCCCTaGGCCCACCCACCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TYGLSVEKTHELPQIDIFSGRSP*AHPPSP
Trigger: GGGAGAAGGTGGGTGGGCTCAGGGAGAACGGCCAGA...AAATATATCAATTTGTGGAAGCTCGTGTGTCTTCTCAACTGATAAACCATACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR GCA 90 bp AGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCGCTCTTTTAATAATCTaGTGGATTCTCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: SKVSFSPDFWLSANKANGALLII*WILSGL
Trigger: CAACCCTGAGAGAATCCAGCAGATTATTAAAAGAGC...GCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR GCA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGTCACCTTCATCTTATTaGATCTGGGATTCAAATCCA +
Preference number: 4 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLSPSSY*IWDSNP
Trigger: TGGATTTGAATCCCAGATGCAATAAGATGAAGGTGA...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp GTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCATATATTTACTTCATTaGCAGCGGAGTACACTCGCA +
Preference number: 4 (lower is better)
Translates to: VSFSPDFWLSANKANGSSIYLLH*QRSTLA
Trigger: TGCGAGTGTACTCCGCTGGCAATGAAGTAAATATAT...GGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGACTCAACTTCAAGTGGTaGATGAGTAGGTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SCATSCVRHFTFILLHLGLNFKW*MSRCPS
Trigger: TGAGGGACACCTACTCATGCACCACTTGAAGTTGAG...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR CCA 90 bp ATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCAAGGTCACTTTTAATAATCTGCTaGATTCTCTCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: IKDASNMAAARGASGARSLLIIC*ILSGLS
Trigger: AGACAACCCTGAGAGAATCCAGCAGATTATTAAAAG...TGACCTTGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGTCATCTTATTGCATCTaGGATTCAAATCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLSSYCI*DSNPDL
Trigger: CAGATCTGGATTTGAATCCCAGATGCAATAAGATGA...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR TCA 90 bp AACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGTTCTCAATTTGTTCATaGTCCAGTCAGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: NPRAFFCTGCYLRGHLLWFSICS*SSQHLQ
Trigger: TTGAAGATGCTGACTGGATCATGAACAAATTGAGAA...CCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508862.5
CDS-3UTR GCA 90 bp CCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTCTTTTAATAATCTaGTGGATTCTCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PDFWLSANKANGSSKPAAALLII*WILSGL
Trigger: CAACCCTGAGAGAATCCAGCAGATTATTAAAAGAGC...AGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR GCA 90 bp TGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGGACTCAGAGCTCTTTTAATAATCTaGTGGATTCTCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: CFLLYRLLPEGTSALGLRALLII*WILSGL
Trigger: CAACCCTGAGAGAATCCAGCAGATTATTAAAAGAGC...TCTGAGTCCCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR GCA 90 bp GGCACTGTCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCAGTTCTAAAACCCACGTaGTTTCTTCTGTACAGGTTG +
Preference number: 4 (lower is better)
Translates to: GTVMCHILCEALHLHLIAVLKPT*FLLYRL
Trigger: CAACCTGTACAGAAGAAAGCACGTGGGTTTTAGAAC...TGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGACAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp GCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACATCATCTTATTGCATCTaGGATTCAAATCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: ALASLLGSCGGHFTTSRTSSYCI*DSNPDL
Trigger: CAGATCTGGATTTGAATCCCAGATGCAATAAGATGA...TGTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
3UTR CAA 72 bp CCCCACTTGCAGAATATAAATGCAACCAGAAGGGATTaGTCTTCACCTTTCAGCTTCTGGAGGAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PHLQNINATRRD*SSPFSFWRREA
Trigger: TGCTTCCCTCCTCCAGAAGCTGAAAGGTGAAGACAAATCCCTTCTGGTTGCATTTATATTCTGCAAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR GCA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGAGTTCTAAAACCCACGTaGTTTCTTCTGTACAGGTTG +
Preference number: 4 (lower is better)
Translates to: SCATSCVRHFTFILLHLGVLKPT*FLLYRL
Trigger: CAACCTGTACAGAAGAAAGCACGTGGGTTTTAGAAC...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATTCACCTTCATCTTATTaGATCTGGGATTCAAATCCA +
Preference number: 4 (lower is better)
Translates to: WSKVSFSPDFWLSANKANSPSSY*IWDSNP
Trigger: TGGATTTGAATCCCAGATGCAATAAGATGAAGGTGA...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CCA 90 bp AAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTCTTTTAATAATCTGCTaGATTCTCTCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KVSFSPDFWLSANKANGSLLIIC*ILSGLS
Trigger: AGACAACCCTGAGAGAATCCAGCAGATTATTAAAAG...AGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CCA 90 bp TGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGATCTGTTCTCCTTGGTTCATGTaGTGGGCACTTCACCACTTC +
Preference number: 4 (lower is better)
Translates to: CEALHLHLIASGIQIQICSPWFM*WALHHF
Trigger: GAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGA...ACAGATCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGAATATATTTACTTCATTaGCAGCGGAGTACACTCGCA +
Preference number: 4 (lower is better)
Translates to: SCATSCVRHFTFILLHLGIYLLH*QRSTLA
Trigger: TGCGAGTGTACTCCGCTGGCAATGAAGTAAATATAT...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR GCA 90 bp ACGTATGGTTTATCAGTTGAGAAGACACACGAGCTTCCACAAATTGATATATTTAGAGTCCATGGCAGCTaGTTTGGCGTCTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TYGLSVEKTHELPQIDIFRVHGS*FGVSPW
Trigger: CCAAGGAGAGACGCCAAAGCAGCTGCCATGGACTCT...AAATATATCAATTTGTGGAAGCTCGTGTGTCTTCTCAACTGATAAACCATACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR CCA 90 bp GCTCGATCAGCACTGTTGGGCAGAAATTTGCCTTTAAGGATGAAGAGTGAGAGCCTTTTAATAATCTGCTaGATTCTCTCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ARSALLGRNLPLRMKSESLLIIC*ILSGLS
Trigger: AGACAACCCTGAGAGAATCCAGCAGATTATTAAAAG...GCTCTCACTCTTCATCCTTAAAGGCAAATTTCTGCCCAACAGTGCTGATCGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR GCA 90 bp TCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGATCACCTTCATCTTATTaGATCTGGGATTCAAATCCA +
Preference number: 4 (lower is better)
Translates to: SCVRHFTFILLHLGFKSRSPSSY*IWDSNP
Trigger: TGGATTTGAATCCCAGATGCAATAAGATGAAGGTGA...TCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS GCA 90 bp GGCTGGCCTCCGGGCTGCCCCGGACCTCGCGCCCCTAGCTCGCGCTaGAGGCCTTTCCTGCTCCTCCGAGGCCGCCCGGCCAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GWPPGCPGPRAPSSR*RPFLLLRGRPARPA
Trigger: CGCAGGCCTGGCCGGGCGGCCTCGGAGGAGCAGGAAAGGCCTGCAGCGCGAGCTAGGGGCGCGAGGTCCGGGGCAGCCCGGAGGCCAGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS GCA 90 bp GCTGCCCCGGACCTCGCGCCCCTAGCTCGCGCTGCAGGCCTTTCCTaGTCCTCCGAGGCCGCCCGGCCAGGCCTGCGTCAAGCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: AAPDLAPLARAAGLS*SSEAARPGLRQARA
Trigger: CGCCCGGGCTTGACGCAGGCCTGGCCGGGCGGCCTCGGAGGAGCAGGAAAGGCCTGCAGCGCGAGCTAGGGGCGCGAGGTCCGGGGCAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS GCA 90 bp GGCCGCCCGGCCAGGCCTGCGTCAAGCCCGGGCGCCGCGCTCCGGTaGACTCAGCTCTCCGGTGGAAGAGCGCAGACCGCAAGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: GRPARPASSPGAALR*TQLSGGRAQTAREK
Trigger: CTTTTCCCTTGCGGTCTGCGCTCTTCCACCGGAGAGCTGAGTGCACCGGAGCGCGGCGCCCGGGCTTGACGCAGGCCTGGCCGGGCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CCA 90 bp TGCGTCAAGCCCGGGCGCCGCGCTCCGGTGCACTCAGCTCTCCGGTaGAAGAGCGCAGACCGCAAGGGAAAAGGTGCCGGCGCGGGTCGC +
Preference number: 5 (lower is better)
Translates to: CVKPGRRAPVHSALR*KSADRKGKGAGAGR
Trigger: GCGACCCGCGCCGGCACCTTTTCCCTTGCGGTCTGCGCTCTTCCACCGGAGAGCTGAGTGCACCGGAGCGCGGCGCCCGGGCTTGACGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS-3UTR CAA 90 bp GCCTCCTCCACAGGGACCATTCTCAACTGTGGGGCAGGAGTGGCCTCTAGTGGTGGCAGGACGGCTTCCTaGAAGGGAGCCCTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: ASSTGTILNCGAGVASSGGRTAS*KGALQA
Trigger: TGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTGCC...ACCACTAGAGGCCACTCCTGCCCCACAGTTGAGAATGGTCCCTGTGGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS GCA 90 bp GAGCAACTTGCTCTTACGCAGAAGCATAAATCATCACGACAAGGTTaGTCCGGCCACCGGGTGCCGCGGGCAGAGGGACGGTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: EQLALTQKHKSSRQG*SGHRVPRAEGRWRG
Trigger: TCCCCTCCACCGTCCCTCTGCCCGCGGCACCCGGTGGCCGGAGCAACCTTGTCGTGATGATTTATGCTTCTGCGTAAGAGCAAGTTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS-3UTR CAA 90 bp AGAGGAGCCTCTGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAAGGAAAAGCAGCTCCTaGGCAGACTGCTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: RGASGARSASPLISGFQPRKSSS*ADCWVC
Trigger: ACACACCCAGCAGTCTGCCAAGGAGCTGCTTTTCCT...TGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCAGAGGCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGCTTTGGCGTCTCTCCTaGGTTCATGTGGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLLWRLS*VHVVGT
Trigger: AGTGCCCACCACATGAACCAAGGAGAGACGCCAAAG...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS TCA 90 bp AGGGCACCAAGCCACAGAGGGGAGAATGCCTACAGGCCTGAGCCTTaGAATTCAAAGTGTGCTCCTGAACCAGCAAAACCCACAGCATCG +
Preference number: 5 (lower is better)
Translates to: RAPSHRGENAYRPEP*NSKCAPEPAKPTAS
Trigger: CGATGCTGTGGGTTTTGCTGGTTCAGGAGCACACTTTGAATTTCAAGGCTCAGGCCTGTAGGCATTCTCCCCTCTGTGGCTTGGTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508816.1
CDS-3UTR CAA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGAGGCAGGACGGCTTCCTaGAAGGGAGCCCTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: SCATSCVRHFTFILLHLGGRTAS*KGALQA
Trigger: TGCCTGAAGGGCTCCCTTCAAGGAAGCCGTCCTGCC...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCAGGAAAAGCAGCTCCTaGGCAGACTGCTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: SKVSFSPDFWLSANKANGRKSSS*ADCWVC
Trigger: ACACACCCAGCAGTCTGCCAAGGAGCTGCTTTTCCT...GCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp AACCCACGTGCTTTCTTCTGTACAGGTTGCTACCTGAGGGGACATCTGCTCTGGCTTTGGCGTCTCTCCTaGGTTCATGTGGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: NPRAFFCTGCYLRGHLLWLWRLS*VHVVGT
Trigger: AGTGCCCACCACATGAACCAAGGAGAGACGCCAAAG...CCAGAGCAGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAAGCACGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp AGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTGATATATTTACTTCATaGCCAGCGGAGTACACTCGC +
Preference number: 5 (lower is better)
Translates to: RRGASQLPEARKAHPRSSDIFTS*PAEYTR
Trigger: GCGAGTGTACTCCGCTGGCAATGAAGTAAATATATC...AGAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CAA 90 bp AGAAGAGGGGCCTCTCAACTTCCAGAGGCCAGGAAGGCTCACCCTCGGAGCTCTGGGACCATTCTCAATTaGTTCATGATCCAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RRGASQLPEARKAHPRSSGTILN*FMIQSA
Trigger: TGCTGACTGGATCATGAACAAATTGAGAATGGTCCC...AGAGCTCCGAGGGTGAGCCTTCCTGGCCTCTGGAAGTTGAGAGGCCCCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508862.5
CDS-3UTR CAA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATCTTTGGCGTCTCTCCTaGGTTCATGTGGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: WSKVSFSPDFWLSANKANLWRLS*VHVVGT
Trigger: AGTGCCCACCACATGAACCAAGGAGAGACGCCAAAG...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp ATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCAAGGTCAAGAGCCCCTCCCCACTaGCAGAATATAAATGCAACC +
Preference number: 5 (lower is better)
Translates to: IKDASNMAAARGASGARSRAPPH*QNINAT
Trigger: GGTTGCATTTATATTCTGCAAGTGGGGAGGGGCTCT...TGACCTTGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS TCA 90 bp TCATCCCTGGCGTCTTCTTTCTGGAACTCAACTTCAAGTGGTGCATaGGTAGGTGTCCCTCACCGGCAGGGTAGGGTAGAAAAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: SSLASSFWNSTSSGA*VGVPHRQGRVEKQE
Trigger: TTCCTGCTTTTCTACCCTACCCTGCCGGTGAGGGACACCTACTCATGCACCACTTGAAGTTGAGTTCCAGAAAGAAGACGCCAGGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379103.7
ENST00000508816.1
CDS GCA 90 bp TCCCCACTAACAGCCTTCGTTACCTGTTACCTCAAACACCCACTCTaGCTTCTGGCTGTTGCTACGCCGGATATAAGCCCTAAAGGCACT +
Preference number: 5 (lower is better)
Translates to: SPLTAFVTCYLKHPL*LLAVATPDISPKGT
Trigger: AGTGCCTTTAGGGCTTATATCCGGCGTAGCAACAGCCAGAAGGCAGAGTGGGTGTTTGAGGTAACAGGTAACGAAGGCTGTTAGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS-3UTR CAA 90 bp TGCTTTGGCGTCTCTCCTTGGTTCATGTGGTGGGCACTTCACCACTTCAAGGACTTTCTTCTGTACAGGTaGCTACCTGAGGGGACATCT +
Preference number: 5 (lower is better)
Translates to: CFGVSPWFMWWALHHFKDFLLYR*LPEGTS
Trigger: AGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAA...GTCCTTGAAGTGGTGAAGTGCCCACCACATGAACCAAGGAGAGACGCCAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGAAGGAAAAGCAGCTCCTaGGCAGACTGCTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: SCATSCVRHFTFILLHLGRKSSS*ADCWVC
Trigger: ACACACCCAGCAGTCTGCCAAGGAGCTGCTTTTCCT...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp TCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGCTGCTGGATATATTTACTTCATaGCCAGCGGAGTACACTCGC +
Preference number: 5 (lower is better)
Translates to: SGFQPTRPMALPNQLLLLDIFTS*PAEYTR
Trigger: GCGAGTGTACTCCGCTGGCAATGAAGTAAATATATC...CAGCAGCAGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp ATAAAGGATGCTAGCAACATGGCCGCGGCAAGAGGAGCCTCTGGAGCAAGGTCACGTATGGTTTATCAGTaGAGAAGACACACGAGCTTC +
Preference number: 5 (lower is better)
Translates to: IKDASNMAAARGASGARSRMVYQ*RRHTSF
Trigger: GAAGCTCGTGTGTCTTCTCAACTGATAAACCATACG...TGACCTTGCTCCAGAGGCTCCTCTTGCCGCGGCCATGTTGCTAGCATCCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR CAA 90 bp CCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTGGCCAAGCACCTACTTaGTTCATGATCCAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: PDFWLSANKANGSSKPAAGQAPT*FMIQSA
Trigger: TGCTGACTGGATCATGAACAAAGTAGGTGCTTGGCC...AGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCGCAACCAGAAGGGATTaGTCTTCACCTTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SKVSFSPDFWLSANKANGATRRD*SSPFSF
Trigger: GAAGCTGAAAGGTGAAGACAAATCCCTTCTGGTTGC...GCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CAA 90 bp AGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCGCTCGATCAGCACTGTaGGGCAGAAATTTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: SKVSFSPDFWLSANKANGARSAL*GRNLPL
Trigger: TAAAGGCAAATTTCTGCCCAACAGTGCTGATCGAGC...GCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CAA 90 bp TGGAGCAAGGTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATTTTCTTCTGTACAGGTaGCTACCTGAGGGGACATCT +
Preference number: 5 (lower is better)
Translates to: WSKVSFSPDFWLSANKANFLLYR*LPEGTS
Trigger: AGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAA...ATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGACCTTGCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000508862.5
CDS-3UTR CAA 90 bp GTCAGCTTCTCCCCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCCCTTTCCTACTTTATTaGGCTTTCTGTTCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VSFSPDFWLSANKANGSSPFLLY*AFCSLL
Trigger: CAGCAAGGAACAGAAAGCCAAATAAAGTAGGAAAGG...GGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGGGGAGAAGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379103.7
CDS-3UTR CAA 90 bp TGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTCAAATCCAGATCTGTTCCTGCAGGGGCTTCTaGGAGGTGGTGAAACCCAAG +
Preference number: 5 (lower is better)
Translates to: CEALHLHLIASGIQIQICSCRGF*EVVKPK
Trigger: CTTGGGTTTCACCACCTCCAAGAAGCCCCTGCAGGA...ACAGATCTGGATTTGAATCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CAA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGATTTCTTCTGTACAGGTaGCTACCTGAGGGGACATCT +
Preference number: 5 (lower is better)
Translates to: SCATSCVRHFTFILLHLGFLLYR*LPEGTS
Trigger: AGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAA...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp GCTCGATCAGCACTGTTGGGCAGAAATTTGCCTTTAAGGATGAAGAGTGAGAGCTTTCTTCTGTACAGGTaGCTACCTGAGGGGACATCT +
Preference number: 5 (lower is better)
Translates to: ARSALLGRNLPLRMKSESFLLYR*LPEGTS
Trigger: AGATGTCCCCTCAGGTAGCAACCTGTACAGAAGAAA...GCTCTCACTCTTCATCCTTAAAGGCAAATTTCTGCCCAACAGTGCTGATCGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS-3UTR CAA 90 bp CCTGATTTCTGGCTTTCAGCCAACAAGGCCAATGGCTCTTCCAAACCAGCTGCTTTCACCTTCATCTTATaGCATCTGGGATTCAAATCC +
Preference number: 5 (lower is better)
Translates to: PDFWLSANKANGSSKPAAFTFIL*HLGFKS
Trigger: GGATTTGAATCCCAGATGCAATAAGATGAAGGTGAA...AGCAGCTGGTTTGGAAGAGCCATTGGCCTTGTTGGCTGAAAGCCAGAAATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS-3UTR CAA 90 bp TCATGTGCCACATCCTGTGTGAGGCACTTCACCTTCATCTTATTGCATCTGGGAGATATATTTACTTCATaGCCAGCGGAGTACACTCGC +
Preference number: 5 (lower is better)
Translates to: SCATSCVRHFTFILLHLGDIFTS*PAEYTR
Trigger: GCGAGTGTACTCCGCTGGCAATGAAGTAAATATATC...TCCCAGATGCAATAAGATGAAGGTGAAGTGCCTCACACAGGATGTGGCACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
CDS TCA 90 bp ATTCCCAAGTTACCAGAGGAAACTAAAGCCAGCAGGAAACTGTCCTaGAGTCAAGAACCTATGGCAGGTGAACCCAGAAAACATTACGCT +
Preference number: 5 (lower is better)
Translates to: IPKLPEETKASRKLS*SQEPMAGEPRKHYA
Trigger: AGCGTAATGTTTTCTGGGTTCACCTGCCATAGGTTCTTGACTTCAGGACAGTTTCCTGCTGGCTTTAGTTTCCTCTGGTAACTTGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CCA 90 bp AGGAAACTAAAGCCAGCAGGAAACTGTCCTGAAGTCAAGAACCTATaGCAGGTGAACCCAGAAAACATTACGCTAAGTGAACAAACCCAG +
Preference number: 5 (lower is better)
Translates to: RKLKPAGNCPEVKNL*QVNPENITLSEQTQ
Trigger: CTGGGTTTGTTCACTTAGCGTAATGTTTTCTGGGTTCACCTGCCATAGGTTCTTGACTTCAGGACAGTTTCCTGCTGGCTTTAGTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS TCA 90 bp ATGGGGTGTTCAAGATCTCTGAAAGGCTTGCTGGAGGACTTTTCCTaGACCTCTCGTGTTGATGACAAGAATTGTGTTTGGATAGGAATC +
Preference number: 5 (lower is better)
Translates to: MGCSRSLKGLLEDFS*TSRVDDKNCVWIGI
Trigger: GATTCCTATCCAAACACAATTCTTGTCATCAACACGAGAGGTTCAGGAAAAGTCCTCCAGCAAGCCTTTCAGAGATCTTGAACACCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS GCA 72 bp CCGGGCTGCCCCGGACCTCGCGCCCCTAGCTCGCGCTaGAGGCCTTTCCTGCTCCTCCGAGGCCGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: PGCPGPRAPSSR*RPFLLLRGRPA
Trigger: GGCCGGGCGGCCTCGGAGGAGCAGGAAAGGCCTGCAGCGCGAGCTAGGGGCGCGAGGTCCGGGGCAGCCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS GCA 72 bp GACCTCGCGCCCCTAGCTCGCGCTGCAGGCCTTTCCTaGTCCTCCGAGGCCGCCCGGCCAGGCCTGCGTCAA +
Preference number: 6 (lower is better)
Translates to: DLAPLARAAGLS*SSEAARPGLRQ
Trigger: TTGACGCAGGCCTGGCCGGGCGGCCTCGGAGGAGCAGGAAAGGCCTGCAGCGCGAGCTAGGGGCGCGAGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CCA 72 bp CCCTCTGCCGGCCGCGCGCGGGACTCGGGGTCCTACTaGGTGCCTCTTCCTAGATCCGACCCCACCCAGTTG +
Preference number: 6 (lower is better)
Translates to: PSAGRARDSGSY*VPLPRSDPTQL
Trigger: CAACTGGGTGGGGTCGGATCTAGGAAGAGGCACCCAGTAGGACCCCGAGTCCCGCGCGCGGCCGGCAGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS TCA 72 bp CCGAACCAGTTCTGCTCCTGGCAGCGGGGCCATCCGTaGGACCCTCTGTCCAGCCTCATCCCTGGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: PNQFCSWQRGHP*DPLSSLIPGVF
Trigger: GAAGACGCCAGGGATGAGGCTGGACAGAGGGTCTCACGGATGGCCCCGCTGCCAGGAGCAGAACTGGTTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379103.7
ENST00000508816.1
CDS CCA 72 bp CTGGCAACAGCGCAGCAAGTATCGGTAGAGCTGCAGTaGCCTCCGAACCAGTTCTGCTCCTGGCAGCGGGGC +
Preference number: 6 (lower is better)
Translates to: LATAQQVSVELQ*PPNQFCSWQRG
Trigger: GCCCCGCTGCCAGGAGCAGAACTGGTTCGGAGGCCACTGCAGCTCTACCGATACTTGCTGCGCTGTTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379102.8
ENST00000379103.7
ENST00000460380.6
ENST00000503642.1
ENST00000508816.1
ENST00000508862.5
CDS GCA 72 bp GCTCTTACGCAGAAGCATAAATCATCACGACAAGGTTaGTCCGGCCACCGGGTGCCGCGGGCAGAGGGACGG +
Preference number: 6 (lower is better)
Translates to: ALTQKHKSSRQG*SGHRVPRAEGR
Trigger: CCGTCCCTCTGCCCGCGGCACCCGGTGGCCGGAGCAACCTTGTCGTGATGATTTATGCTTCTGCGTAAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS TCA 72 bp CCGAACCAGTTCTGCTCCTGGCAGCGGGGCCATCCGTaGGACCCTCTGTCCCTGAACCATAACAGAAGTTCC +
Preference number: 6 (lower is better)
Translates to: PNQFCSWQRGHP*DPLSLNHNRSS
Trigger: GGAACTTCTGTTATGGTTCAGGGACAGAGGGTCTCACGGATGGCCCCGCTGCCAGGAGCAGAACTGGTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503642.1
CDS TCA 72 bp GAAGACCCTGAGGGGCAATCACTAGGAAACCAGCTCTaGCATCAGCCATGGTCTGGCGAGGGCACCAAGCCA +
Preference number: 6 (lower is better)
Translates to: EDPEGQSLGNQL*HQPWSGEGTKP
Trigger: TGGCTTGGTGCCCTCGCCAGACCATGGCTGATGTCAGAGCTGGTTTCCTAGTGATTGCCCCTCAGGGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379103.7
ENST00000508816.1
CDS CCA 72 bp CCTCCACAGGGACCATTCTCAACTGTGGGGCAGGAGTaGCCTCTAGTGGTCATGGGGATCACAGCCATCATC +
Preference number: 6 (lower is better)
Translates to: PPQGPFSTVGQE*PLVVMGITAII
Trigger: GATGATGGCTGTGATCCCCATGACCACTAGAGGCCACTCCTGCCCCACAGTTGAGAATGGTCCCTGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460380.6
CDS CCA 72 bp ATCACTAGGAAACCAGCTCTGACATCAGCCATGGTCTaGCGAGGGCACCAAGCCACAGAGGGGAGAATGCCT +
Preference number: 6 (lower is better)
Translates to: ITRKPALTSAMV*RGHQATEGRMP
Trigger: AGGCATTCTCCCCTCTGTGGCTTGGTGCCCTCGCCAGACCATGGCTGATGTCAGAGCTGGTTTCCTAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379103.7
ENST00000508816.1
CDS TCA 72 bp ACTGGGTGCCTCTTCCTAGATCCGACCCCACCCAGTTaGAAGCTGTCCCCACTAACAGCCTTCGTTACCTGT +
Preference number: 6 (lower is better)
Translates to: TGCLFLDPTPPS*KLSPLTAFVTC
Trigger: ACAGGTAACGAAGGCTGTTAGTGGGGACAGCTTTCAACTGGGTGGGGTCGGATCTAGGAAGAGGCACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CAA 72 bp TACTGGGTGCCTCTTCCTAGATCCGACCCCACCCAGTaGAAAGCTGTCCCCACTAACAGCCTTCGTTACCTG +
Preference number: 6 (lower is better)
Translates to: YWVPLPRSDPTQ*KAVPTNSLRYL
Trigger: CAGGTAACGAAGGCTGTTAGTGGGGACAGCTTTCAACTGGGTGGGGTCGGATCTAGGAAGAGGCACCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS TCA 72 bp TTTCCTCAGCCTCCTACGGTGCTGAGATTATGGGCATaGGCCACTGCGCCCAGCGTTGAACATCTTACCCTT +
Preference number: 6 (lower is better)
Translates to: FPQPPTVLRLWA*ATAPSVEHLTL
Trigger: AAGGGTAAGATGTTCAACGCTGGGCGCAGTGGCTCATGCCCATAATCTCAGCACCGTAGGAGGCTGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CAA 72 bp AACCCACAGCATCGGGAGCTCATCACAAATGTAGTCTaGGGCCCCACCCCAAAGACCCACCAGATCAAACCT +
Preference number: 6 (lower is better)
Translates to: NPQHRELITNVV*GPTPKTHQIKP
Trigger: AGGTTTGATCTGGTGGGTCTTTGGGGTGGGGCCCAAGACTACATTTGTGATGAGCTCCCGATGCTGTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508816.1
CDS TCA 72 bp AGCCACAGAGGGGAGAATGCCTACAGGCCTGAGCCTTaGAATTCAAAGTGTGCTCCTGAACCAGCAAAACCC +
Preference number: 6 (lower is better)
Translates to: SHRGENAYRPEP*NSKCAPEPAKP
Trigger: GGGTTTTGCTGGTTCAGGAGCACACTTTGAATTTCAAGGCTCAGGCCTGTAGGCATTCTCCCCTCTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508816.1
CDS GCA 72 bp ACAGCCTTCGTTACCTGTTACCTCAAACACCCACTCTaGCTTCTGGCTGTTGCTACGCCGGATATAAGCCCT +
Preference number: 6 (lower is better)
Translates to: TAFVTCYLKHPL*LLAVATPDISP
Trigger: AGGGCTTATATCCGGCGTAGCAACAGCCAGAAGGCAGAGTGGGTGTTTGAGGTAACAGGTAACGAAGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS GCA 72 bp TACAGTAGCATGATCAGGGATCACTGCAGTCACAACTaGCCGGGCTCAAACGATTCTACCTCAGCCTCTCAA +
Preference number: 6 (lower is better)
Translates to: YSSMIRDHCSHN*PGSNDSTSASQ
Trigger: TTGAGAGGCTGAGGTAGAATCGTTTGAGCCCGGGCAGTTGTGACTGCAGTGATCCCTGATCATGCTACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CAA 72 bp ATAGGCAAAAGTACAGAGACAGAAGTACATTGGTGGTaGCCTAGGGCTGGGAGAATGGGAGTAGATGGGAGG +
Preference number: 6 (lower is better)
Translates to: IGKSTETEVHWW*PRAGRMGVDGR
Trigger: CCTCCCATCTACTCCCATTCTCCCAGCCCTAGGCAACCACCAATGTACTTCTGTCTCTGTACTTTTGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CAA 90 bp AAAGGATCAATCCTAGGAGCGAAAGGGTTTTGGCCACGGAGCAACTaGCTCTTACGCAGAAGCATAAATCATCACGACAAGGTTGCTCCG +
Preference number: 6 (lower is better)
Translates to: KGSILGAKGFWPRSN*LLRRSINHHDKVAP
Trigger: CGGAGCAACCTTGTCGTGATGATTTATGCTTCTGCGTAAGAGCAAGTTGCTCCGTGGCCAAAACCCTTTCGCTCCTAGGATTGATCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CCA 72 bp CCACAAAAAGGATCAATCCTAGGAGCGAAAGGGTTTTaGCCACGGAGCAACTTGCTCTTACGCAGAAGCATA +
Preference number: 6 (lower is better)
Translates to: PQKGSILGAKGF*PRSNLLLRRSI
Trigger: TATGCTTCTGCGTAAGAGCAAGTTGCTCCGTGGCCAAAACCCTTTCGCTCCTAGGATTGATCCTTTTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CCA 72 bp AGAATAGGCAAAAGTACAGAGACAGAAGTACATTGGTaGTTGCCTAGGGCTGGGAGAATGGGAGTAGATGGG +
Preference number: 6 (lower is better)
Translates to: RIGKSTETEVHW*LPRAGRMGVDG
Trigger: CCCATCTACTCCCATTCTCCCAGCCCTAGGCAACCACCAATGTACTTCTGTCTCTGTACTTTTGCCTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CAA 72 bp ATCCTAGGAGCGAAAGGGTTTTGGCCACGGAGCAACTaGCTCTTACGCAGAAGCATAAATCATCACGACAAG +
Preference number: 6 (lower is better)
Translates to: ILGAKGFWPRSN*LLRRSINHHDK
Trigger: CTTGTCGTGATGATTTATGCTTCTGCGTAAGAGCAAGTTGCTCCGTGGCCAAAACCCTTTCGCTCCTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CCA 72 bp TCCAGAATAGGCAAAAGTACAGAGACAGAAGTACATTaGTGGTTGCCTAGGGCTGGGAGAATGGGAGTAGAT +
Preference number: 6 (lower is better)
Translates to: SRIGKSTETEVH*WLPRAGRMGVD
Trigger: ATCTACTCCCATTCTCCCAGCCCTAGGCAACCACCAATGTACTTCTGTCTCTGTACTTTTGCCTATTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CCA 72 bp AAGCCAGCAGGAAACTGTCCTGAAGTCAAGAACCTATaGCAGGTGAACCCAGAAAACATTACGCTAAGTGAA +
Preference number: 6 (lower is better)
Translates to: KPAGNCPEVKNL*QVNPENITLSE
Trigger: TTCACTTAGCGTAATGTTTTCTGGGTTCACCTGCCATAGGTTCTTGACTTCAGGACAGTTTCCTGCTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS TCA 72 bp TCAAGATCTCTGAAAGGCTTGCTGGAGGACTTTTCCTaGACCTCTCGTGTTGATGACAAGAATTGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: SRSLKGLLEDFS*TSRVDDKNCVW
Trigger: CCAAACACAATTCTTGTCATCAACACGAGAGGTTCAGGAAAAGTCCTCCAGCAAGCCTTTCAGAGATCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS TCA 72 bp CCTATGGCAGGTGAACCCAGAAAACATTACGCTAAGTaGACAAACCCAGTCACAAGGGGCTACTTAATGTAT +
Preference number: 6 (lower is better)
Translates to: PMAGEPRKHYAK*TNPVTRGYLMY
Trigger: ATACATTAAGTAGCCCCTTGTGACTGGGTTTGTTCACTTAGCGTAATGTTTTCTGGGTTCACCTGCCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS TCA 72 bp ACAGCTGCACAACTCTGCAAACACACTAAAAGACACTaGATTGTGCACTTTAGATGGGTGAACTGTATGCTT +
Preference number: 6 (lower is better)
Translates to: TAAQLCKHTKRH*IVHFRWVNCML
Trigger: AAGCATACAGTTCACCCATCTAAAGTGCACAATTCAGTGTCTTTTAGTGTGTTTGCAGAGTTGTGCAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS TCA 72 bp GTGAACAAACCCAGTCACAAGGGGCTACTTAATGTATaGTTCCATTTATACGAAACATCCAGAATAGGCAAA +
Preference number: 6 (lower is better)
Translates to: VNKPSHKGLLNV*FHLYETSRIGK
Trigger: TTTGCCTATTCTGGATGTTTCGTATAAATGGAATCATACATTAAGTAGCCCCTTGTGACTGGGTTTGTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CAA 90 bp TCTCGTGTTGATGACAAGAATTGTGTTTGGATAGGAATCTGCGTTTaGAATCATTTCACCAAATTACAGTCCCATAACACCTGTCAAAAG +
Preference number: 6 (lower is better)
Translates to: SRVDDKNCVWIGICV*NHFTKLQSHNTCQK
Trigger: CTTTTGACAGGTGTTATGGGACTGTAATTTGGTGAAATGATTCAAAACGCAGATTCCTATCCAAACACAATTCTTGTCATCAACACGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS GCA 72 bp CGTGTTGATGACAAGAATTGTGTTTGGATAGGAATCTaGGTTTTGAATCATTTCACCAAATTACAGTCCCAT +
Preference number: 6 (lower is better)
Translates to: RVDDKNCVWIGI*VLNHFTKLQSH
Trigger: ATGGGACTGTAATTTGGTGAAATGATTCAAAACGCAGATTCCTATCCAAACACAATTCTTGTCATCAACACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582343.1
CDS CAA 72 bp GATGACAAGAATTGTGTTTGGATAGGAATCTGCGTTTaGAATCATTTCACCAAATTACAGTCCCATAACACC +
Preference number: 6 (lower is better)
Translates to: DDKNCVWIGICV*NHFTKLQSHNT
Trigger: GGTGTTATGGGACTGTAATTTGGTGAAATGATTCAAAACGCAGATTCCTATCCAAACACAATTCTTGTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582343.1