RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYRM4 (Homo sapiens)

Ensembl gene IDs: ENSG00000214113

Ensembl transcript IDs: ENST00000330636.9, ENST00000458438.2, ENST00000463032.5, ENST00000464010.5, ENST00000468929.5, ENST00000480566.5, ENST00000606472.1

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCTCAAACAGAGAGTGGATGCTGAAGGTGGTCCCTGGCCGCCACTaGTGGCTGGTCCCCGGCTTGCTAGGTCCTGGGCATGTCTCGATT +
Preference number: 1 (lower is better)
Translates to: ISNREWMLKVVPGRH*WLVPGLLGPGHVSI
Trigger: AATCGAGACATGCCCAGGACCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGTTTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR TCA 90 bp TGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCAGAGTTaGACCCTCCCTGAGGGCCCCCAACAGCCCTCTCCAGGCCTTGTA +
Preference number: 1 (lower is better)
Translates to: WCLNLPSPRQFSSQS*TLPEGPQQPSPGLV
Trigger: TACAAGGCCTGGAGAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR CCA 90 bp GTGGACCTTGTCTTCAGGTCAAGGCGAAGAAGAGGTGGAGAGTTGTaGCGAGGGGACCCAGTTAAGGGGCCAGTAAGAGTGCAGGTGAGG +
Preference number: 1 (lower is better)
Translates to: VDLVFRSRRRRGGEL*RGDPVKGPVRVQVR
Trigger: CCTCACCTGCACTCTTACTGGCCCCTTAACTGGGTCCCCTCGCCACAACTCTCCACCTCTTCTTCGCCTTGACCTGAAGACAAGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463032.5
3UTR TCA 90 bp CTTGCCTTCACCAAGGCAGTTCTCGTCTCAGAGTTGAACCCTCCCTaGGGGCCCCCAACAGCCCTCTCCAGGCCTTGTATCAGTAGGAAA +
Preference number: 1 (lower is better)
Translates to: LAFTKAVLVSELNPP*GPPTALSRPCISRK
Trigger: TTTCCTACTGATACAAGGCCTGGAGAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAACTGCCTTGGTGAAGGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR GCA 90 bp CCTGCATTTCCAGCAAATTCCCAGGTGGGGCTGAGGTTGCTGATCTaGAGTGCTCCATCTCTGGGTGTGTACCTACACACCCGTCACCTT +
Preference number: 1 (lower is better)
Translates to: PAFPANSQVGLRLLI*SAPSLGVYLHTRHL
Trigger: AAGGTGACGGGTGTGTAGGTACACACCCAGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAATTTGCTGGAAATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR GCA 90 bp ATTTCCAGCAAATTCCCAGGTGGGGCTGAGGTTGCTGATCTGCAGTaGTCCATCTCTGGGTGTGTACCTACACACCCGTCACCTTTGTTG +
Preference number: 1 (lower is better)
Translates to: ISSKFPGGAEVADLQ*SISGCVPTHPSPLL
Trigger: CAACAAAGGTGACGGGTGTGTAGGTACACACCCAGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAATTTGCTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR TCA 90 bp ATTTCAACAATCCCAGGTGTTGTCAAAGAAGGTGGCATTTACAAATaGGTCCCACAGGTCCTAGCCACAGTCTGTGGTAATGACATGCTA +
Preference number: 1 (lower is better)
Translates to: ISTIPGVVKEGGIYK*VPQVLATVCGNDML
Trigger: TAGCATGTCATTACCACAGACTGTGGCTAGGACCTGTGGGACTCATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTGTTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR TCA 90 bp AAGTATCCTTTTGAGTCCCTGCTTTCAGTTCTCTGGGGTATATACTaGGAAATGGAATCACTAGATCATTTGGTCATTCTATTCAATACT +
Preference number: 1 (lower is better)
Translates to: KYPFESLLSVLWGIY*EMESLDHLVILFNT
Trigger: AGTATTGAATAGAATGACCAAATGATCTAGTGATTCCATTTCTCAGTATATACCCCAGAGAACTGAAAGCAGGGACTCAAAAGGATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR CCA 90 bp GGAGAGTTGTGGCGAGGGGACCCAGTTAAGGGGCCAGTAAGAGTGCAGGTGAGGGTCCCTGGCCGCCACTaGTGGCTGGTCCCCGGCTTG +
Preference number: 2 (lower is better)
Translates to: GELWRGDPVKGPVRVQVRVPGRH*WLVPGL
Trigger: CAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGAC...CCTCACCTGCACTCTTACTGGCCCCTTAACTGGGTCCCCTCGCCACAACTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463032.5
3UTR-3UTR TCA 90 bp ACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGGGACAGAGAGTGGATGCTaGAGGTGGTCCCTGGCCGCC +
Preference number: 2 (lower is better)
Translates to: TRCGEGLEPAFPANSQVGTESGC*RWSLAA
Trigger: GGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGT...CCCCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp GATCTGCAGTGCTCCATCTCTGGGTGTGTACCTACACACCCGTCACCTTTGTTGGTCCCTGGCCGCCACTaGTGGCTGGTCCCCGGCTTG +
Preference number: 2 (lower is better)
Translates to: DLQCSISGCVPTHPSPLLVPGRH*WLVPGL
Trigger: CAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGAC...CAACAAAGGTGACGGGTGTGTAGGTACACACCCAGAGATGGAGCACTGCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp AAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGTCCCTGGCCGCCACTaGTGGCTGGTCCCCGGCTTG +
Preference number: 2 (lower is better)
Translates to: KKLSNSPGASVHQPDLGTVPGRH*WLVPGL
Trigger: CAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGAC...GGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp AGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGTCCACCAGCCAGATTTaGGCACCGGTGCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SSPTLQVLLSTSQIWAPVSTSQI*APVLPS
Trigger: GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGA...CACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp AAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTACAGAGAGTGGATGCTaGAGGTGGTCCCTGGCCGCC +
Preference number: 2 (lower is better)
Translates to: KLSNSPGASVHQPDLGTGTESGC*RWSLAA
Trigger: GGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGT...ACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp TGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGAGTTGAACCCTCCCTaGGGGCCCCCAACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: CCPQSQVVLELAFTKAVLELNPP*GPPTAL
Trigger: GAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTC...GAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp TCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGTTCTCGTCTCAGAGTTaGACCCTCCCTGAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: SPGVGRGLSLHFQQIPRWFSSQS*TLPEGP
Trigger: GGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAA...CCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp ACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGCTGCCCAGCACGAGGTCACAAGTCTaGGACCAGCCTGACCAACAC +
Preference number: 2 (lower is better)
Translates to: TLQVLLSTSQIWAPVLPSTRSQV*DQPDQH
Trigger: GTGTTGGTCAGGCTGGTCTCAGACTTGTGACCTCGT...GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463032.5
3UTR-3UTR GCA 90 bp AGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGCCCTGCCCTACTCCATaGTGCCCCCAGTCTCAAGTG +
Preference number: 2 (lower is better)
Translates to: SSPTLQVLLSTSQIWAPVPCPTP*CPQSQV
Trigger: CACTTGAGACTGGGGGCAGCATGGAGTAGGGCAGGG...CACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp CATGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCGCTGAAGGTGGTCCCTaGCCGCCACTGGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: HAAPSLKWCLNLPSPRQFAEGGP*PPLVAG
Trigger: ACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGC...GAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp AAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTTTCTCGTCTCAGAGTTaGACCCTCCCTGAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: KLSNSPGASVHQPDLGTGFSSQS*TLPEGP
Trigger: GGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAA...ACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp ACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGGCTGAAGGTGGTCCCTaGCCGCCACTGGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: TVPHPSLTESESAEREVLAEGGP*PPLVAG
Trigger: ACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGC...CAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp ACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGGTATGGGAGTCGCCCTaGGCTTGGGTCAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: TVPHPSLTESESAEREVLVWESP*AWVRLG
Trigger: CCCCAGCCTGACCCAAGCCCAGGGCGACTCCCATAC...CAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp CACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCCCTGGCCGCCACTGGTaGCTGGTCCCCGGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: HPSLTESESAEREVLRDVPGRHW*LVPGLL
Trigger: TAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGG...GACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp CTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCCCGTAGAGTTGAACCCTCCCTaGGGGCCCCCAACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: LCCTGLRYKLQGAPCIPVELNPP*GPPTAL
Trigger: GAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTC...TACGGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp ACTCCATGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCATTCTCGTCTCAGAGTTaGACCCTCCCTGAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: TPCCPQSQVVLELAFTKAFSSQS*TLPEGP
Trigger: GGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAA...TGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCATGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp ACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGCCAGGCTTCAGGGTATaGGAGTCGCCCTGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: TVPHPSLTESESAEREVLPGFRV*ESPWAW
Trigger: CCAAGCCCAGGGCGACTCCCATACCCTGAAGCCTGG...CAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR CAA 90 bp GGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGGGCTGAGGTaGCTGATCTGCAGTGCTCCATCTCTGGGTGTGTACCTACACACC +
Preference number: 2 (lower is better)
Translates to: GLEPAFPANSQVGLR*LICSAPSLGVYLHT
Trigger: GGTGTGTAGGTACACACCCAGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp GCTCTCTCATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATGTGTGGGGAGGGGCTTaGGCCTGCATTTCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: ALSFTRCGEGLEPAFPANVWGGA*ACISSK
Trigger: TTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACAC...ATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATGAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp CTGGGTGTGTACCTACACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGCGGTGCTGCCCAGCATaGCCCAGGCTTCAGGGTATG +
Preference number: 2 (lower is better)
Translates to: LGVYLHTRHLCCTGLRYKRCCPA*PRLQGM
Trigger: CATACCCTGAAGCCTGGGGCATGCTGGGCAGCACCG...CTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGTAGGTACACACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR CAA 90 bp AATGTGGACCTTGTCTTCAGGTCAAGGCGAAGAAGAGGTGGAGAGTaGTGGCGAGGGGACCCAGTTAAGGGGCCAGTAAGAGTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: NVDLVFRSRRRRGGE*WRGDPVKGPVRVQV
Trigger: CACCTGCACTCTTACTGGCCCCTTAACTGGGTCCCCTCGCCACAACTCTCCACCTCTTCTTCGCCTTGACCTGAAGACAAGGTCCACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463032.5
3UTR-3UTR TCA 90 bp CCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTGAGTTGAACCCTCCCTaGGGGCCCCCAACAGCCCTC +
Preference number: 2 (lower is better)
Translates to: PSLTESESAEREVLRDVFELNPP*GPPTAL
Trigger: GAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTC...AAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp ACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGGGCAGAATAGAGAAAAATaGCTGTGCCTCACCCCTCAC +
Preference number: 2 (lower is better)
Translates to: TRCGEGLEPAFPANSQVGQNREK*LCLTPH
Trigger: GTGAGGGGTGAGGCACAGTCATTTTTCTCTATTCTG...CCCCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp AGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGCCCAGTCTCAAGTGGTaGTTGAACTTGCCTTCACCA +
Preference number: 2 (lower is better)
Translates to: SSPTLQVLLSTSQIWAPVPSLKW*LNLPSP
Trigger: TGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGG...CACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp ACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGTGCCCTACTCCATGCTaGCCCCAGTCTCAAGTGGTG +
Preference number: 2 (lower is better)
Translates to: TVPHPSLTESESAEREVLCPTPC*PQSQVV
Trigger: CACCACTTGAGACTGGGGGCAGCATGGAGTAGGGCA...CAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp ACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGGGAAGGCTATTGTAAGCTaGTTTTGGGAGCCCCCATCT +
Preference number: 2 (lower is better)
Translates to: TRCGEGLEPAFPANSQVGKAIVS*FWEPPS
Trigger: AGATGGGGGCTCCCAAAACCAGCTTACAATAGCCTT...CCCCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp AAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGCAGTGCTCCATCTCTaGGTGTGTACCTACACACCC +
Preference number: 2 (lower is better)
Translates to: KSSPTLQVLLSTSQIWAPAVLHL*VCTYTP
Trigger: GGGTGTGTAGGTACACACCCAGAGATGGAGCACTGC...CGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp AGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAACCCTGGCCGCCACTGGTaGCTGGTCCCCGGCTTGCTA +
Preference number: 2 (lower is better)
Translates to: RRGNTQHYSERTPALHSNPGRHW*LVPGLL
Trigger: TAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGG...GTTAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp GCTCTCTCATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATGTCTCAAGTGGTGCTTaGACTTGCCTTCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: ALSFTRCGEGLEPAFPANVSSGA*TCLHQG
Trigger: GCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGAC...ATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATGAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp CACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTGCCCTACTCCATGCTaGCCCCAGTCTCAAGTGGTG +
Preference number: 2 (lower is better)
Translates to: HPSLTESESAEREVLRDVCPTPC*PQSQVV
Trigger: CACCACTTGAGACTGGGGGCAGCATGGAGTAGGGCA...GACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp CACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGGGCTCAGGTATAAGTTaGAGGGTGCACCGTGTATCC +
Preference number: 2 (lower is better)
Translates to: HTRHLCCTGLRYKLQGAPGSGIS*RVHRVS
Trigger: GGATACACGGTGCACCCTGCAACTTATACCTGAGCC...CGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp AGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGATCTCAAACAGAGAGTaGATGCTGAAGGTGGTCCCT +
Preference number: 2 (lower is better)
Translates to: SSPTLQVLLSTSQIWAPVISNRE*MLKVVP
Trigger: AGGGACCACCTTCAGCATCCACTCTCTGTTTGAGAT...CACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp ACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGTGGGAGGGGTTTATCTaGGGTCAAAGGCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: TVPHPSLTESESAEREVLWEGFI*GQRLRE
Trigger: CTCCCTGAGCCTTTGACCCCAGATAAACCCCTCCCA...CAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp GAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTACAGAGAGTGGATGCTaGAGGTGGTCCCTGGCCGCC +
Preference number: 2 (lower is better)
Translates to: EGSAERCLFKKLSNSPGATESGC*RWSLAA
Trigger: GGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGT...AGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp AAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGCACACAGCACTATTCTaGACGAACTCCAGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: KSSPTLQVLLSTSQIWAPHTALF*TNSSSP
Trigger: TGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTG...CGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp ACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGGTCTCAAGTGGTGCTTaGACTTGCCTTCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: TVPHPSLTESESAEREVLVSSGA*TCLHQG
Trigger: GCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGAC...CAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp CATGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCCCCAGTCTCAAGTGGTaGTTGAACTTGCCTTCACCA +
Preference number: 2 (lower is better)
Translates to: HAAPSLKWCLNLPSPRQFPSLKW*LNLPSP
Trigger: TGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGG...GAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp GCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACTTTGGGCACCGGTGCTaGCCAGCATGCCCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: AERCLFKKLSNSPGASVHFGHRC*PACPRL
Trigger: AAGCCTGGGGCATGCTGGGCAGCACCGGTGCCCAAA...GTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp CTGGGTGTGTACCTACACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGCTCCAACTCTCCAGGTaGTTCTGTCCACCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: LGVYLHTRHLCCTGLRYKLQLSR*FCPPAR
Trigger: TCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAG...CTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGTAGGTACACACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp TTCCCAGGTGGGGCTGAGGTTGCTGATCTGCAGTGCTCCATCTCTGGGTGTGTAATCTCAAACAGAGAGTaGATGCTGAAGGTGGTCCCT +
Preference number: 2 (lower is better)
Translates to: FPGGAEVADLQCSISGCVISNRE*MLKVVP
Trigger: AGGGACCACCTTCAGCATCCACTCTCTGTTTGAGAT...TACACACCCAGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp GCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGATCTCAAACAGAGAGTaGATGCTGAAGGTGGTCCCT +
Preference number: 2 (lower is better)
Translates to: AAPSLKWCLNLPSPRQFSISNRE*MLKVVP
Trigger: AGGGACCACCTTCAGCATCCACTCTCTGTTTGAGAT...CGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp GCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGAAGGCTATTGTAAGCTaGTTTTGGGAGCCCCCATCT +
Preference number: 2 (lower is better)
Translates to: AAPSLKWCLNLPSPRQFSKAIVS*FWEPPS
Trigger: AGATGGGGGCTCCCAAAACCAGCTTACAATAGCCTT...CGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp AAAATGACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGGGCTTGGGTCAGGCTaGGGCTCTCTCATTCACCAG +
Preference number: 2 (lower is better)
Translates to: KMTVPHPSLTESESAEREGLGSG*GSLIHQ
Trigger: CTGGTGAATGAGAGAGCCCCAGCCTGACCCAAGCCC...TTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGTCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp CGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCTGTGGACCAGCTCTGTaGGGAAGAGCAAACGTCTGT +
Preference number: 2 (lower is better)
Translates to: RHLCCTGLRYKLQGAPCICGPAL*GRANVC
Trigger: ACAGACGTTTGCTCTTCCTCACAGAGCTGGTCCACA...GATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464010.5
3UTR-3UTR TCA 90 bp CATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGGATCAGCTTGTCAGTTaGATACAGTTGGCCAATGTG +
Preference number: 2 (lower is better)
Translates to: HSPGVGRGLSLHFQQIPRDQLVS*IQLANV
Trigger: CACATTGGCCAACTGTATTCAACTGACAAGCTGATC...CCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463032.5
ENST00000464010.5
3UTR-3UTR GCA 90 bp GAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCCTGCCCTACTCCATaGTGCCCCCAGTCTCAAGTG +
Preference number: 2 (lower is better)
Translates to: ERCLFKKLSNSPGASVHQPCPTP*CPQSQV
Trigger: CACTTGAGACTGGGGGCAGCATGGAGTAGGGCAGGG...CTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp CCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTCTCCAACTCTCCAGGTaGTTCTGTCCACCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: PSLTESESAEREVLRDVFLQLSR*FCPPAR
Trigger: TCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAG...AAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTTTCTCGTCTCAGAGTTaGACCCTCCCTGAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: ESESAEREVLRDVFLKSSFSSQS*TLPEGP
Trigger: GGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAA...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp GTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCGATCAGCTTGTCAGTTaGATACAGTTGGCCAATGTG +
Preference number: 2 (lower is better)
Translates to: VQGRRGNTQHYSERTPALDQLVS*IQLANV
Trigger: CACATTGGCCAACTGTATTCAACTGACAAGCTGATC...GAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463032.5
ENST00000464010.5
3UTR-3UTR TCA 90 bp GCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTGTCTCGATTCTCAATaGTCAGCTTGTCAGTTGAAT +
Preference number: 2 (lower is better)
Translates to: AAPSLKWCLNLPSPRQFSCLDSQ*SACQLN
Trigger: ATTCAACTGACAAGCTGATCATTGAGAATCGAGACA...CGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463032.5
ENST00000464010.5
3UTR-3UTR GCA 90 bp GATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGGGCTCAGGTATAAGTTaGAGGGTGCACCGTGTATCC +
Preference number: 2 (lower is better)
Translates to: DVFLKSSPTLQVLLSTSQGSGIS*RVHRVS
Trigger: GGATACACGGTGCACCCTGCAACTTATACCTGAGCC...CTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp GCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCTCCAACTCTCCAGGTaGTTCTGTCCACCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: AERCLFKKLSNSPGASVHLQLSR*FCPPAR
Trigger: TCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAG...GTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp CACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCATCTCAAACAGAGAGTaGATGCTGAAGGTGGTCCCT +
Preference number: 2 (lower is better)
Translates to: HPSLTESESAEREVLRDVISNRE*MLKVVP
Trigger: AGGGACCACCTTCAGCATCCACTCTCTGTTTGAGAT...GACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp GAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTGGGAGGGGTTTATCTaGGGTCAAAGGCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: EGSAERCLFKKLSNSPGAWEGFI*GQRLRE
Trigger: CTCCCTGAGCCTTTGACCCCAGATAAACCCCTCCCA...AGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp ACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCCCGTACAGTTGGCCAATGTaGACCTTGTCTTCAGGTCAA +
Preference number: 2 (lower is better)
Translates to: TFVVLGSGISCRVHRVSPYSWPM*TLSSGQ
Trigger: TTGACCTGAAGACAAGGTCCACATTGGCCAACTGTA...CGGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463032.5
3UTR-3UTR TCA 90 bp GATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGCACACAGCACTATTCTaGACGAACTCCAGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: DVFLKSSPTLQVLLSTSQHTALF*TNSSSP
Trigger: TGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTG...CTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp GCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACGTCTCAAGTGGTGCTTaGACTTGCCTTCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: AERCLFKKLSNSPGASVHVSSGA*TCLHQG
Trigger: GCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGAC...GTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTGTGTGGGGAGGGGCTTaGGCCTGCATTTCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: ESESAEREVLRDVFLKSSVWGGA*ACISSK
Trigger: TTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACAC...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp ACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCGTGTGGGGAGGGGCTTaGGCCTGCATTTCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: TESESAEREVLRDVFLKSVWGGA*ACISSK
Trigger: TTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACAC...GCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp TGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATGCCCCCAGTCTCAAGTaGTGCTTGAACTTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: CLFKKLSNSPGASVHQPDAPSLK*CLNLPS
Trigger: TGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGC...ATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR GCA 90 bp AGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAACCCCAGTCTCAAGTGGTaGTTGAACTTGCCTTCACCA +
Preference number: 2 (lower is better)
Translates to: RRGNTQHYSERTPALHSNPSLKW*LNLPSP
Trigger: TGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGG...GTTAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp ACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCAGAGGTGGAGAGTTGTaGCGAGGGGACCCAGTTAAG +
Preference number: 2 (lower is better)
Translates to: TESESAEREVLRDVFLKSRGGEL*RGDPVK
Trigger: CTTAACTGGGTCCCCTCGCCACAACTCTCCACCTCT...GCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000463032.5
3UTR-3UTR CCA 90 bp TGGGTTGAGGGTGGAGAAGCGGGAAGACACGATAATGTAGTACTTAAGAGCCTGGCACAGAAGAAACTCTaGTCTCTTCCTGATGTCTCT +
Preference number: 2 (lower is better)
Translates to: WVEGGEAGRHDNVVLKSLAQKKL*SLPDVS
Trigger: AGAGACATCAGGAAGAGACCAGAGTTTCTTCTGTGC...CAGGCTCTTAAGTACTACATTATCGTGTCTTCCCGCTTCTCCACCCTCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR GCA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTGGCTCAGGTATAAGTTaGAGGGTGCACCGTGTATCC +
Preference number: 2 (lower is better)
Translates to: ESESAEREVLRDVFLKSSGSGIS*RVHRVS
Trigger: GGATACACGGTGCACCCTGCAACTTATACCTGAGCC...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp CAATCCCAGGTGTTGTCAAAGAAGGTGGCATTTACAAATGAGTCCCACAGGTCCCACCATCAAATCTGGTaGCAGACAATGACTATGGAC +
Preference number: 2 (lower is better)
Translates to: QSQVLSKKVAFTNESHRSHHQIW*QTMTMD
Trigger: GTCCATAGTCATTGTCTGCCACCAGATTTGATGGTG...GGACCTGTGGGACTCATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR TCA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTTCACCCCTCACTTACTaGGTCAGAATCTGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: ESESAEREVLRDVFLKSSSPLTY*VRICRE
Trigger: CTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGA...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp TTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCTGTCTCGATTCTCAATaGTCAGCTTGTCAGTTGAAT +
Preference number: 2 (lower is better)
Translates to: FKKLSNSPGASVHQPDLGCLDSQ*SACQLN
Trigger: ATTCAACTGACAAGCTGATCATTGAGAATCGAGACA...GCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463032.5
ENST00000464010.5
3UTR-3UTR TCA 90 bp ACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCCAGAATAGAGAAAAATaGCTGTGCCTCACCCCTCAC +
Preference number: 2 (lower is better)
Translates to: TESESAEREVLRDVFLKSQNREK*LCLTPH
Trigger: GTGAGGGGTGAGGCACAGTCATTTTTCTCTATTCTG...GCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTAAGGCTATTGTAAGCTaGTTTTGGGAGCCCCCATCT +
Preference number: 2 (lower is better)
Translates to: ESESAEREVLRDVFLKSSKAIVS*FWEPPS
Trigger: AGATGGGGGCTCCCAAAACCAGCTTACAATAGCCTT...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CCA 90 bp GTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAACACTTGAAAAGGCTATTGTAAGCTaGTTTTGGGAGCCCCCATCT +
Preference number: 2 (lower is better)
Translates to: VTHSTILNELQLSILTLEKAIVS*FWEPPS
Trigger: AGATGGGGGCTCCCAAAACCAGCTTACAATAGCCTT...TTCAAGTGTTAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR TCA 90 bp GCACACAGCTTTCAATTAATGGCTTCTAGTAATCGATTACTTCCATTTCAACAAGGTGGCATTTACAAATaGGTCCCACAGGTCCTAGCC +
Preference number: 2 (lower is better)
Translates to: AHSFQLMASSNRLLPFQQGGIYK*VPQVLA
Trigger: GGCTAGGACCTGTGGGACTCATTTGTAAATGCCACC...TTGTTGAAATGGAAGTAATCGATTACTAGAAGCCATTAATTGAAAGCTGTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR TCA 90 bp TTACTTCCATTTCAACAATCCCAGGTGTTGTCAAAGAAGGTGGCATTTACAAATACTCTGGTCTCTTCCTaGTGTCTCTTAACAGCTTTA +
Preference number: 2 (lower is better)
Translates to: LLPFQQSQVLSKKVAFTNTLVSS*CLLTAL
Trigger: TAAAGCTGTTAAGAGACATCAGGAAGAGACCAGAGT...ATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTGTTGAAATGGAAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR CCA 90 bp TTACTTCCATTTCAACAATCCCAGGTGTTGTCAAAGAAGGTGGCATTTACAAATATACACCATCAAATCTaGTGGCAGACAATGACTATG +
Preference number: 2 (lower is better)
Translates to: LLPFQQSQVLSKKVAFTNIHHQI*WQTMTM
Trigger: CATAGTCATTGTCTGCCACCAGATTTGATGGTGTAT...ATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTGTTGAAATGGAAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR CCA 72 bp AGAGAGTGGATGCTGAAGGTGGTCCCTGGCCGCCACTaGTGGCTGGTCCCCGGCTTGCTAGGTCCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: REWMLKVVPGRH*WLVPGLLGPGH
Trigger: ATGCCCAGGACCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp ACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGCTGCCCAGCCAGGTGGGGCTGAGGTaGCTGATCTGCAGTGCTCCA +
Preference number: 3 (lower is better)
Translates to: TLQVLLSTSQIWAPVLPSQVGLR*LICSAP
Trigger: TGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTG...GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR CCA 72 bp CCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTaGGCACCGGTGCTGCCCAGCATGCCCCAGGCTTCA +
Preference number: 3 (lower is better)
Translates to: PTLQVLLSTSQI*APVLPSMPQAS
Trigger: TGAAGCCTGGGGCATGCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR CCA 72 bp CATCTCAAACAGAGAGTGGATGCTGAAGGTGGTCCCTaGCCGCCACTGGTGGCTGGTCCCCGGCTTGCTAGG +
Preference number: 3 (lower is better)
Translates to: HLKQRVDAEGGP*PPLVAGPRLAR
Trigger: CCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGTTTGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR TCA 72 bp TTTTGGGAGCCCCCATCTCAAACAGAGAGTGGATGCTaGAGGTGGTCCCTGGCCGCCACTGGTGGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: FWEPPSQTESGC*RWSLAATGGWS
Trigger: GGACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGTTTGAGATGGGGGCTCCCAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp CCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCATGGCTGGTCCCCGGCTaGCTAGGTCCTGGGCATGTC +
Preference number: 3 (lower is better)
Translates to: PQSQVVLELAFTKAVLVSWLVPG*LGPGHV
Trigger: GACATGCCCAGGACCTAGCAAGCCGGGGACCAGCCA...TGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp GATCTGCAGTGCTCCATCTCTGGGTGTGTACCTACACACCCGTCACCTTTGTTGTGGCTGGTCCCCGGCTaGCTAGGTCCTGGGCATGTC +
Preference number: 3 (lower is better)
Translates to: DLQCSISGCVPTHPSPLLWLVPG*LGPGHV
Trigger: GACATGCCCAGGACCTAGCAAGCCGGGGACCAGCCA...CAACAAAGGTGACGGGTGTGTAGGTACACACCCAGAGATGGAGCACTGCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp GCTCTCTCATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATGGTGTGGGGAGGGGCTaGAGCCTGCATTTCCAGCAA +
Preference number: 3 (lower is better)
Translates to: ALSFTRCGEGLEPAFPANGVGRG*SLHFQQ
Trigger: TTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACC...ATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATGAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR TCA 72 bp AACTTGCCTTCACCAAGGCAGTTCTCGTCTCAGAGTTaGACCCTCCCTGAGGGCCCCCAACAGCCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: NLPSPRQFSSQS*TLPEGPQQPSP
Trigger: TGGAGAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAACTGCCTTGGTGAAGGCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp GATCTGCAGTGCTCCATCTCTGGGTGTGTACCTACACACCCGTCACCTTTGTTGCAGGTGGGGCTGAGGTaGCTGATCTGCAGTGCTCCA +
Preference number: 3 (lower is better)
Translates to: DLQCSISGCVPTHPSPLLQVGLR*LICSAP
Trigger: TGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTG...CAACAAAGGTGACGGGTGTGTAGGTACACACCCAGAGATGGAGCACTGCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR CCA 72 bp GTCTTCAGGTCAAGGCGAAGAAGAGGTGGAGAGTTGTaGCGAGGGGACCCAGTTAAGGGGCCAGTAAGAGTG +
Preference number: 3 (lower is better)
Translates to: VFRSRRRRGGEL*RGDPVKGPVRV
Trigger: CACTCTTACTGGCCCCTTAACTGGGTCCCCTCGCCACAACTCTCCACCTCTTCTTCGCCTTGACCTGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463032.5
3UTR-3UTR CAA 90 bp AAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGGGCTCAGGTATAAGTaGCAGGGTGCACCGTGTATC +
Preference number: 3 (lower is better)
Translates to: KSSPTLQVLLSTSQIWAPGLRYK*QGAPCI
Trigger: GATACACGGTGCACCCTGCAACTTATACCTGAGCCC...CGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR GCA 72 bp AAATTCCCAGGTGGGGCTGAGGTTGCTGATCTGCAGTaGTCCATCTCTGGGTGTGTACCTACACACCCGTCA +
Preference number: 3 (lower is better)
Translates to: KFPGGAEVADLQ*SISGCVPTHPS
Trigger: TGACGGGTGTGTAGGTACACACCCAGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp GCTCTCTCATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATACACACCCGTCACCTTaGTTGTACTGGGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: ALSFTRCGEGLEPAFPANTHPSP*LYWAQV
Trigger: TACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGT...ATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATGAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp GAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTGGCTGGTCCCCGGCTaGCTAGGTCCTGGGCATGTC +
Preference number: 3 (lower is better)
Translates to: EGSAERCLFKKLSNSPGAWLVPG*LGPGHV
Trigger: GACATGCCCAGGACCTAGCAAGCCGGGGACCAGCCA...AGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp GATCTGCAGTGCTCCATCTCTGGGTGTGTACCTACACACCCGTCACCTTTGTTGACACACCCGTCACCTTaGTTGTACTGGGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: DLQCSISGCVPTHPSPLLTHPSP*LYWAQV
Trigger: TACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGT...CAACAAAGGTGACGGGTGTGTAGGTACACACCCAGAGATGGAGCACTGCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp CTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCCCGTAAAGTGGTGCTTGAACTaGCCTTCACCAAGGCAGTTC +
Preference number: 3 (lower is better)
Translates to: LCCTGLRYKLQGAPCIPVKWCLN*PSPRQF
Trigger: GAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTT...TACGGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp CTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCCCGTAAGTCTCAAGTGGTGCTaGAACTTGCCTTCACCAAGG +
Preference number: 3 (lower is better)
Translates to: LCCTGLRYKLQGAPCIPVSLKWC*NLPSPR
Trigger: CCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACT...TACGGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp TCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGTTCTCAATGATCAGCTaGTCAGTTGAATACAGTTGG +
Preference number: 3 (lower is better)
Translates to: SPGVGRGLSLHFQQIPRWFSMIS*SVEYSW
Trigger: CCAACTGTATTCAACTGACAAGCTGATCATTGAGAA...CCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463032.5
ENST00000464010.5
3UTR CCA 72 bp GTACTTAAGAGCCTGGGGTTTGTCCCAAGACAAACCTaGTTTAAACACCTGCTCTGCCAATCACTGGCTCCG +
Preference number: 3 (lower is better)
Translates to: VLKSLGFVPRQT*FKHLLCQSLAP
Trigger: CGGAGCCAGTGATTGGCAGAGCAGGTGTTTAAACCAGGTTTGTCTTGGGACAAACCCCAGGCTCTTAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR CAA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTCAGGTGGGGCTGAGGTaGCTGATCTGCAGTGCTCCA +
Preference number: 3 (lower is better)
Translates to: ESESAEREVLRDVFLKSSQVGLR*LICSAP
Trigger: TGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTG...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR GCA 72 bp TGGGGTTTGTCCCAAGACAAACCTGGTTTAAACACCTaGTCTGCCAATCACTGGCTCCGAAACCTTGGGTTT +
Preference number: 3 (lower is better)
Translates to: WGLSQDKPGLNT*SANHWLRNLGF
Trigger: AAACCCAAGGTTTCGGAGCCAGTGATTGGCAGAGCAGGTGTTTAAACCAGGTTTGTCTTGGGACAAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR CAA 90 bp CCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTAGTCTCAAGTGGTGCTaGAACTTGCCTTCACCAAGG +
Preference number: 3 (lower is better)
Translates to: PSLTESESAEREVLRDVFSLKWC*NLPSPR
Trigger: CCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACT...AAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR CCA 72 bp AAACACCTGCTCTGCCAATCACTGGCTCCGAAACCTTaGGTTTCACCTAACCCTGTAGTCTCAGTTTCCTTA +
Preference number: 3 (lower is better)
Translates to: KHLLCQSLAPKP*VSPNPVVSVSL
Trigger: TAAGGAAACTGAGACTACAGGGTTAGGTGAAACCCAAGGTTTCGGAGCCAGTGATTGGCAGAGCAGGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR CAA 90 bp GAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTAGTCTCAAGTGGTGCTaGAACTTGCCTTCACCAAGG +
Preference number: 3 (lower is better)
Translates to: EGSAERCLFKKLSNSPGASLKWC*NLPSPR
Trigger: CCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACT...AGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR-3UTR CAA 90 bp TGGGTTGAGGGTGGAGAAGCGGGAAGACACGATAATGTAGTACTTAAGAGCCTGCAACAATCCCAGGTGTaGTCAAAGAAGGTGGCATTT +
Preference number: 3 (lower is better)
Translates to: WVEGGEAGRHDNVVLKSLQQSQV*SKKVAF
Trigger: AAATGCCACCTTCTTTGACAACACCTGGGATTGTTG...CAGGCTCTTAAGTACTACATTATCGTGTCTTCCCGCTTCTCCACCCTCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR CAA 90 bp ACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCACACACCCGTCACCTTaGTTGTACTGGGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: TESESAEREVLRDVFLKSTHPSP*LYWAQV
Trigger: TACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGT...GCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR TCA 72 bp ATCCCAGGTGTTGTCAAAGAAGGTGGCATTTACAAATaGGTCCCACAGGTCCTAGCCACAGTCTGTGGTAAT +
Preference number: 3 (lower is better)
Translates to: IPGVVKEGGIYK*VPQVLATVCGN
Trigger: ATTACCACAGACTGTGGCTAGGACCTGTGGGACTCATTTGTAAATGCCACCTTCTTTGACAACACCTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR TCA 72 bp AATACTGCTCTGAACACTGGTGGGCAAGTATCCTTTTaGGTCCCTGCTTTCAGTTCTCTGGGGTATATACTG +
Preference number: 3 (lower is better)
Translates to: NTALNTGGQVSF*VPAFSSLGYIL
Trigger: CAGTATATACCCCAGAGAACTGAAAGCAGGGACTCAAAAGGATACTTGCCCACCAGTGTTCAGAGCAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR CCA 72 bp CGATTCTCAATGATCAGCTTGTCAGTTGAATACAGTTaGCCAATGTGGACCAGCTCTGTGAGGAAGAGCAAA +
Preference number: 3 (lower is better)
Translates to: RFSMISLSVEYS*PMWTSSVRKSK
Trigger: TTTGCTCTTCCTCACAGAGCTGGTCCACATTGGCCAACTGTATTCAACTGACAAGCTGATCATTGAGAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464010.5
3UTR CCA 72 bp CGATTCTCAATGATCAGCTTGTCAGTTGAATACAGTTaGCCAATGTGGACCTTGTCTTCAGGTCAAGGCGAA +
Preference number: 3 (lower is better)
Translates to: RFSMISLSVEYS*PMWTLSSGQGE
Trigger: TTCGCCTTGACCTGAAGACAAGGTCCACATTGGCCAACTGTATTCAACTGACAAGCTGATCATTGAGAATCG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463032.5
3UTR CCA 72 bp TTCCATTTCAACAATCCCAGGTGTTGTCAAAGAAGGTaGCATTTACAAATGAGTCCCACAGGTCCTAGCCAC +
Preference number: 3 (lower is better)
Translates to: FHFNNPRCCQRR*HLQMSPTGPSH
Trigger: GTGGCTAGGACCTGTGGGACTCATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTGTTGAAATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR-3UTR CAA 90 bp GATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGTTCTCAATGATCAGCTaGTCAGTTGAATACAGTTGG +
Preference number: 3 (lower is better)
Translates to: DVFLKSSPTLQVLLSTSQFSMIS*SVEYSW
Trigger: CCAACTGTATTCAACTGACAAGCTGATCATTGAGAA...CTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463032.5
ENST00000464010.5
3UTR TCA 72 bp TTTGAGTCCCTGCTTTCAGTTCTCTGGGGTATATACTaGGAAATGGAATCACTAGATCATTTGGTCATTCTA +
Preference number: 3 (lower is better)
Translates to: FESLLSVLWGIY*EMESLDHLVIL
Trigger: TAGAATGACCAAATGATCTAGTGATTCCATTTCTCAGTATATACCCCAGAGAACTGAAAGCAGGGACTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR GCA 90 bp AGAGTGGATGCTGAAGGTGGTCCCTGGCCGCCACTGGTGGCTGGTCCCCGGCTTCTAAGCGGGCAGCCCTaGGGATCGCGGACGGCGCCA +
Preference number: 4 (lower is better)
Translates to: RVDAEGGPWPPLVAGPRLLSGQP*GSRTAP
Trigger: TGGCGCCGTCCGCGATCCGCAGGGCTGCCCGCTTAG...AAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330636.9
CDS-3UTR CCA 90 bp GAAGGTGGTCCCTGGCCGCCACTGGTGGCTGGTCCCCGGCTTGCTAGGTCCTGGGTATGGGAGTCGCCCTaGGCTTGGGTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EGGPWPPLVAGPRLARSWVWESP*AWVRLG
Trigger: CCCCAGCCTGACCCAAGCCCAGGGCGACTCCCATAC...CCAGGACCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TCTCGTCTCAGAGTTGAACCCTCCCTGAGGGCCCCCAACAGCCCTCTCCAGGCCGCTGAAGGTGGTCCCTaGCCGCCACTGGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SRLRVEPSLRAPNSPLQAAEGGP*PPLVAG
Trigger: ACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGC...GGCCTGGAGAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp AGAGTGGATGCTGAAGGTGGTCCCTGGCCGCCACTGGTGGCTGGTCCCCGGCTTTCCACCAGCCAGATTTaGGCACCGGTGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RVDAEGGPWPPLVAGPRLSTSQI*APVLPS
Trigger: GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGA...AAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp ACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGCTGCCCAGCTCCCCAGGCTCCGGCTaGTGTTCCCCGACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLQVLLSTSQIWAPVLPSSPGSG*CSPTSS
Trigger: GGAGGAAGTCGGGGAACAGCAGCCGGAGCCTGGGGA...GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR TCA 90 bp AAGGTGGTCCCTGGCCGCCACTGGTGGCTGGTCCCCGGCTTGCTAGGTCCTGGGTGTGGACCAGCTCTGTaGGGAAGAGCAAACGTCTGT +
Preference number: 4 (lower is better)
Translates to: KVVPGRHWWLVPGLLGPGCGPAL*GRANVC
Trigger: ACAGACGTTTGCTCTTCCTCACAGAGCTGGTCCACA...CCCAGGACCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR CCA 90 bp AAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGTCCCTGGCCGCCACTaGTGGCTGGTCCCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: KLSNSPGASVHQPDLGTGVPGRH*WLVPGL
Trigger: CAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGAC...ACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGCTGCCCAGCATGCCCCAGGGGCTTGGGTCAGGCTaGGGCTCTCTCATTCACCAG +
Preference number: 4 (lower is better)
Translates to: VLLSTSQIWAPVLPSMPQGLGSG*GSLIHQ
Trigger: CTGGTGAATGAGAGAGCCCCAGCCTGACCCAAGCCC...CTGGGGCATGCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp AGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGGAGTTGAACCCTCCCTaGGGGCCCCCAACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSPTLQVLLSTSQIWAPVELNPP*GPPTAL
Trigger: GAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTC...CACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp ACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGGGTTTGGGCACCGGTGCTaGCCAGCATGCCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TRCGEGLEPAFPANSQVGFGHRC*PACPRL
Trigger: AAGCCTGGGGCATGCTGGGCAGCACCGGTGCCCAAA...CCCCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CATCTCAAACAGAGAGTGGATGCTGAAGGTGGTCCCTGGCCGCCACTGGTGGCTGTATGGGAGTCGCCCTaGGCTTGGGTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLKQRVDAEGGPWPPLVAVWESP*AWVRLG
Trigger: CCCCAGCCTGACCCAAGCCCAGGGCGACTCCCATAC...AGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGTTTGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp GATCTGCAGTGCTCCATCTCTGGGTGTGTACCTACACACCCGTCACCTTTGTTGGCTGCGGCTCGGCTTTaGCAGCGGGCCGGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: DLQCSISGCVPTHPSPLLAAARL*QRAGPK
Trigger: CTTAGGCCCGGCCCGCTGGCAAAGCCGAGCCGCAGC...CAACAAAGGTGACGGGTGTGTAGGTACACACCCAGAGATGGAGCACTGCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330636.9
CDS-3UTR CCA 90 bp AAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGCCTGGCCGCCACTGGTaGCTGGTCCCCGGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: KSSPTLQVLLSTSQIWAPPGRHW*LVPGLL
Trigger: TAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGG...CGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCCCTGGCCGCCACTGGTaGCTGGTCCCCGGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: CCPQSQVVLELAFTKAVLPGRHW*LVPGLL
Trigger: TAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGG...GAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TCTCGTCTCAGAGTTGAACCCTCCCTGAGGGCCCCCAACAGCCCTCTCCAGGCCTGGGAGGGGTTTATCTaGGGTCAAAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SRLRVEPSLRAPNSPLQAWEGFI*GQRLRE
Trigger: CTCCCTGAGCCTTTGACCCCAGATAAACCCCTCCCA...GGCCTGGAGAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp TTCCCAGGTGGGGCTGAGGTTGCTGATCTGCAGTGCTCCATCTCTGGGTGTGTACGGTGCTGCCCAGCATaGCCCAGGCTTCAGGGTATG +
Preference number: 4 (lower is better)
Translates to: FPGGAEVADLQCSISGCVRCCPA*PRLQGM
Trigger: CATACCCTGAAGCCTGGGGCATGCTGGGCAGCACCG...TACACACCCAGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp ACTCCATGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTATGGGAGTCGCCCTaGGCTTGGGTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TPCCPQSQVVLELAFTKAVWESP*AWVRLG
Trigger: CCCCAGCCTGACCCAAGCCCAGGGCGACTCCCATAC...TGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCATGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp GCTCTCTCATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATACAGAGAGTGGATGCTaGAGGTGGTCCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ALSFTRCGEGLEPAFPANTESGC*RWSLAA
Trigger: GGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGT...ATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATGAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp TCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGGTGTGGGGAGGGGCTTaGGCCTGCATTTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SPGVGRGLSLHFQQIPRWVWGGA*ACISSK
Trigger: TTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACAC...CCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp AGAGTGGATGCTGAAGGTGGTCCCTGGCCGCCACTGGTGGCTGGTCCCCGGCTTCAGAATAGAGAAAAATaGCTGTGCCTCACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: RVDAEGGPWPPLVAGPRLQNREK*LCLTPH
Trigger: GTGAGGGGTGAGGCACAGTCATTTTTCTCTATTCTG...AAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp AAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGCGGTGCTGCCCAGCATaGCCCAGGCTTCAGGGTATG +
Preference number: 4 (lower is better)
Translates to: KSSPTLQVLLSTSQIWAPRCCPA*PRLQGM
Trigger: CATACCCTGAAGCCTGGGGCATGCTGGGCAGCACCG...CGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp TGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCCGGTGCTGCCCAGCATaGCCCAGGCTTCAGGGTATG +
Preference number: 4 (lower is better)
Translates to: CCPQSQVVLELAFTKAVLRCCPA*PRLQGM
Trigger: CATACCCTGAAGCCTGGGGCATGCTGGGCAGCACCG...GAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp AAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGTTTGGGCACCGGTGCTaGCCAGCATGCCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KSSPTLQVLLSTSQIWAPFGHRC*PACPRL
Trigger: AAGCCTGGGGCATGCTGGGCAGCACCGGTGCCCAAA...CGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp ACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGGGCTCCAACTCTCCAGGTaGTTCTGTCCACCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TRCGEGLEPAFPANSQVGLQLSR*FCPPAR
Trigger: TCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAG...CCCCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp GCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCCTCCTGGCGGCTGTaGCTTGCTCAGCTACCTGTC +
Preference number: 4 (lower is better)
Translates to: AAPSLKWCLNLPSPRQFSSSWRL*LAQLPV
Trigger: GACAGGTAGCTGAGCAAGGCACAGCCGCCAGGAGGA...CGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR CCA 90 bp TTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCGTCCCTGGCCGCCACTaGTGGCTGGTCCCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: FKKLSNSPGASVHQPDLGVPGRH*WLVPGL
Trigger: CAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGAC...GCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCCCGCTGAAGGTGGTCCCTaGCCGCCACTGGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HLCCTGLRYKLQGAPCIPAEGGP*PPLVAG
Trigger: ACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGC...GGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCGCTGAAGGTGGTCCCTaGCCGCCACTGGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VQGRRGNTQHYSERTPALAEGGP*PPLVAG
Trigger: ACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGC...GAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTCCACCAGCCAGATTTaGGCACCGGTGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HTRHLCCTGLRYKLQGAPSTSQI*APVLPS
Trigger: GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGA...CGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp CCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCAACAGAGAGTGGATGCTaGAGGTGGTCCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PQSQVVLELAFTKAVLVSTESGC*RWSLAA
Trigger: GGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGT...TGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp CGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCGAGTTGAACCCTCCCTaGGGGCCCCCAACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RHLCCTGLRYKLQGAPCIELNPP*GPPTAL
Trigger: GAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTC...GATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp AGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGACGAGGTCACAAGTCTaGGACCAGCCTGACCAACAC +
Preference number: 4 (lower is better)
Translates to: SSPTLQVLLSTSQIWAPVTRSQV*DQPDQH
Trigger: GTGTTGGTCAGGCTGGTCTCAGACTTGTGACCTCGT...CACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR GCA 90 bp CAATGTGGACCTTGTCTTCAGGTCAAGGCGAAGAAGAGGTGGAGAGTTGTGGCGCGGTGCTGCCCAGCATaGCCCAGGCTTCAGGGTATG +
Preference number: 4 (lower is better)
Translates to: QCGPCLQVKAKKRWRVVARCCPA*PRLQGM
Trigger: CATACCCTGAAGCCTGGGGCATGCTGGGCAGCACCG...CGCCACAACTCTCCACCTCTTCTTCGCCTTGACCTGAAGACAAGGTCCACATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR CCA 90 bp CCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTGTCCCTGGCCGCCACTaGTGGCTGGTCCCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PSLTESESAEREVLRDVFVPGRH*WLVPGL
Trigger: CAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGAC...AAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAGTCCCTGGCCGCCACTaGTGGCTGGTCCCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GDVVTHSTILNELQLSILVPGRH*WLVPGL
Trigger: CAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGAC...TAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp AGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGTGGGAGGGGTTTATCTaGGGTCAAAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSPTLQVLLSTSQIWAPVWEGFI*GQRLRE
Trigger: CTCCCTGAGCCTTTGACCCCAGATAAACCCCTCCCA...CACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp ACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGGGGCCCCCAGTCTCAAGTaGTGCTTGAACTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TRCGEGLEPAFPANSQVGAPSLK*CLNLPS
Trigger: TGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGC...CCCCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CATCTCAAACAGAGAGTGGATGCTGAAGGTGGTCCCTGGCCGCCACTGGTGGCTAAGGCGAAGAAGAGGTaGAGAGTTGTGGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HLKQRVDAEGGPWPPLVAKAKKR*RVVARG
Trigger: TCCCCTCGCCACAACTCTCCACCTCTTCTTCGCCTT...AGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGTTTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463032.5
3UTR CAA 72 bp ACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTaGCAGGGTGCACCGTGTATCCCCGTAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TRHLCCTGLRYK*QGAPCIPVALP
Trigger: GGGCAGGGCTACGGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp TTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCGAGTTGAACCCTCCCTaGGGGCCCCCAACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FKKLSNSPGASVHQPDLGELNPP*GPPTAL
Trigger: GAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTC...GCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp GTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCTTCTCGTCTCAGAGTTaGACCCTCCCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VQGRRGNTQHYSERTPALFSSQS*TLPEGP
Trigger: GGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAA...GAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp CACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGCCCTACTCCATGCTaGCCCCAGTCTCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HTRHLCCTGLRYKLQGAPCPTPC*PQSQVV
Trigger: CACCACTTGAGACTGGGGGCAGCATGGAGTAGGGCA...CGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp CAAGGTAGGAATGGGGTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAATTTGGGCACCGGTGCTaGCCAGCATGCCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QGRNGVQGRRGNTQHYSEFGHRC*PACPRL
Trigger: AAGCCTGGGGCATGCTGGGCAGCACCGGTGCCCAAA...TTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCACCCCATTCCTACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp TGGCCAATGTGGACCTTGTCTTCAGGTCAAGGCGAAGAAGAGGTGGAGAGTTGTTTTGGGCACCGGTGCTaGCCAGCATGCCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WPMWTLSSGQGEEEVESCFGHRC*PACPRL
Trigger: AAGCCTGGGGCATGCTGGGCAGCACCGGTGCCCAAA...ACAACTCTCCACCTCTTCTTCGCCTTGACCTGAAGACAAGGTCCACATTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR GCA 90 bp CATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGCTCCAACTCTCCAGGTaGTTCTGTCCACCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HSPGVGRGLSLHFQQIPRLQLSR*FCPPAR
Trigger: TCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAG...CCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp ACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGGGACACTTGTGCGCGACTaGAGGCTGCCATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TRCGEGLEPAFPANSQVGTLVRD*RLPFWK
Trigger: TTTCCAAAATGGCAGCCTCCAGTCGCGCACAAGTGT...CCCCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330636.9
ENST00000468929.5
CDS-3UTR CCA 90 bp TTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCGTATGGGAGTCGCCCTaGGCTTGGGTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FKKLSNSPGASVHQPDLGVWESP*AWVRLG
Trigger: CCCCAGCCTGACCCAAGCCCAGGGCGACTCCCATAC...GCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TGGCCAATGTGGACCTTGTCTTCAGGTCAAGGCGAAGAAGAGGTGGAGAGTTGTCCAGGCTTCAGGGTATaGGAGTCGCCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: WPMWTLSSGQGEEEVESCPGFRV*ESPWAW
Trigger: CCAAGCCCAGGGCGACTCCCATACCCTGAAGCCTGG...ACAACTCTCCACCTCTTCTTCGCCTTGACCTGAAGACAAGGTCCACATTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR CCA 90 bp CATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGAGAGGTGGAGAGTTGTaGCGAGGGGACCCAGTTAAG +
Preference number: 4 (lower is better)
Translates to: HSPGVGRGLSLHFQQIPRRGGEL*RGDPVK
Trigger: CTTAACTGGGTCCCCTCGCCACAACTCTCCACCTCT...CCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR CCA 90 bp CTGGGTGTGTACCTACACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTCCCCGACTTCCTCCTaGCGGCTGTGCCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LGVYLHTRHLCCTGLRYKSPTSS*RLCLAQ
Trigger: CTGAGCAAGGCACAGCCGCCAGGAGGAAGTCGGGGA...CTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGTAGGTACACACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR TCA 90 bp AGTTCTCGTCTCAGAGTTGAACCCTCCCTGAGGGCCCCCAACAGCCCTCTCCAGTGTAATTGTAGGCGCTaGAACGCTTGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSRLRVEPSLRAPNSPLQCNCRR*NACSLS
Trigger: TGAGAGAGAGCAAGCGTTTCAGCGCCTACAATTACA...CTGGAGAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330636.9
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp TCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGCACACAGCACTATTCTaGACGAACTCCAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPGVGRGLSLHFQQIPRWHTALF*TNSSSP
Trigger: TGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTG...CCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp GGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAGAGTTGAACCCTCCCTaGGGGCCCCCAACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GDVVTHSTILNELQLSILELNPP*GPPTAL
Trigger: GAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTC...TAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp TGTCTTCAGGTCAAGGCGAAGAAGAGGTGGAGAGTTGTGGCGAGGGGACCCAGTGTCTCAAGTGGTGCTTaGACTTGCCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: CLQVKAKKRWRVVARGPSVSSGA*TCLHQG
Trigger: GCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGAC...ACTGGGTCCCCTCGCCACAACTCTCCACCTCTTCTTCGCCTTGACCTGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR TCA 90 bp AAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGTCTCAAGTGGTGCTTaGACTTGCCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: KLSNSPGASVHQPDLGTGVSSGA*TCLHQG
Trigger: GCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGAC...ACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp ACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGGTGTGGGGAGGGGCTTaGGCCTGCATTTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: TVPHPSLTESESAEREVLVWGGA*ACISSK
Trigger: TTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACAC...CAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp CAAGGTAGGAATGGGGTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAACCCTGCCCTACTCCATaGTGCCCCCAGTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: QGRNGVQGRRGNTQHYSEPCPTP*CPQSQV
Trigger: CACTTGAGACTGGGGGCAGCATGGAGTAGGGCAGGG...TTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCACCCCATTCCTACCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TCTCGTCTCAGAGTTGAACCCTCCCTGAGGGCCCCCAACAGCCCTCTCCAGGCCCTCCAAGGTCTCTCTTaGCTTTATTCACTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: SRLRVEPSLRAPNSPLQALQGLS*LYSLGF
Trigger: AAACCCTAGTGAATAAAGCCAAGAGAGACCTTGGAG...GGCCTGGAGAGGGCTGTTGGGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
CDS-3UTR CCA 90 bp AACGAACTCCAGCTCTCCATTCTAACACTTGAACCAAGGAAAGACAGCAGTCCTCCTGGCCGCCACTGGTaGCTGGTCCCCGGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: NELQLSILTLEPRKDSSPPGRHW*LVPGLL
Trigger: TAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGG...AGGACTGCTGTCTTTCCTTGGTTCAAGTGTTAGAATGGAGAGCTGGAGTTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR CAA 72 bp CCTGCATTTCCAGCAAATTCCCAGGTGGGGCTGAGGTaGCTGATCTGCAGTGCTCCATCTCTGGGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: PAFPANSQVGLR*LICSAPSLGVY
Trigger: GTACACACCCAGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAATTTGCTGGAAATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
3UTR CAA 72 bp CTTGTCTTCAGGTCAAGGCGAAGAAGAGGTGGAGAGTaGTGGCGAGGGGACCCAGTTAAGGGGCCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LVFRSRRRRGGE*WRGDPVKGPVR
Trigger: TCTTACTGGCCCCTTAACTGGGTCCCCTCGCCACAACTCTCCACCTCTTCTTCGCCTTGACCTGAAGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR TCA 90 bp AAAATGACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAACAGAGAGTGGATGCTaGAGGTGGTCCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KMTVPHPSLTESESAERETESGC*RWSLAA
Trigger: GGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGT...TTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp AAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTCACACAGCACTATTCTaGACGAACTCCAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KLSNSPGASVHQPDLGTGHTALF*TNSSSP
Trigger: TGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTG...ACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp GCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCACCCCTCACTTACTaGGTCAGAATCTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: AAPSLKWCLNLPSPRQFSSPLTY*VRICRE
Trigger: CTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGA...CGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp CATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGAACGAAATAAAATGCTaGGGCTCGGCTTTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: HSPGVGRGLSLHFQQIPRNEIKC*GSALPA
Trigger: CGCTGGCAAAGCCGAGCCGCAGCATTTTATTTCGTT...CCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330636.9
CDS-3UTR GCA 90 bp TCCAGCAAATTCCCAGGTGGGGCTGAGGTTGCTGATCTGCAGTGCTCCATCTCTGGCTCAGGTATAAGTTaGAGGGTGCACCGTGTATCC +
Preference number: 4 (lower is better)
Translates to: SSKFPGGAEVADLQCSISGSGIS*RVHRVS
Trigger: GGATACACGGTGCACCCTGCAACTTATACCTGAGCC...AGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAATTTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp CCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCACTCCAACTCTCCAGGTaGTTCTGTCCACCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PQSQVVLELAFTKAVLVSLQLSR*FCPPAR
Trigger: TCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAG...TGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGGCTGAAGGTGGTCCCTaGCCGCCACTGGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ERCLFKKLSNSPGASVHQAEGGP*PPLVAG
Trigger: ACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGC...CTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTCCAGGCTTCAGGGTATaGGAGTCGCCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PSLTESESAEREVLRDVFPGFRV*ESPWAW
Trigger: CCAAGCCCAGGGCGACTCCCATACCCTGAAGCCTGG...AAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTATCCACCAGCCAGATTTaGGCACCGGTGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GDVVTHSTILNELQLSILSTSQI*APVLPS
Trigger: GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGA...TAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGCAAACGTCTGTCAGGTaGTTTCCTCAAGGCCAACTT +
Preference number: 4 (lower is better)
Translates to: SPGVGRGLSLHFQQIPRWQTSVR*FPQGQL
Trigger: AAGTTGGCCTTGAGGAAACCACCTGACAGACGTTTG...CCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR TCA 90 bp ACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGCTGCCCAGCTGTCTCGATTCTCAATaGTCAGCTTGTCAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: TLQVLLSTSQIWAPVLPSCLDSQ*SACQLN
Trigger: ATTCAACTGACAAGCTGATCATTGAGAATCGAGACA...GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp GAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGACAGAGAGTGGATGCTaGAGGTGGTCCCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ERCLFKKLSNSPGASVHQTESGC*RWSLAA
Trigger: GGCGGCCAGGGACCACCTTCAGCATCCACTCTCTGT...CTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp GCTCTCTCATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATCACACAGCACTATTCTaGACGAACTCCAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALSFTRCGEGLEPAFPANHTALF*TNSSSP
Trigger: TGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTG...ATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATGAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp CCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTCTCGTCTCAGAGTTaGACCCTCCCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSLTESESAEREVLRDVFFSSQS*TLPEGP
Trigger: GGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAA...AAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp AAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGTCTCAAGTGGTGCTTaGACTTGCCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: KKLSNSPGASVHQPDLGTVSSGA*TCLHQG
Trigger: GCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGAC...GGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp AAAATGACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAACCCTGCCCTACTCCATaGTGCCCCCAGTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: KMTVPHPSLTESESAEREPCPTP*CPQSQV
Trigger: CACTTGAGACTGGGGGCAGCATGGAGTAGGGCAGGG...TTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGTCATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp GTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCGGCTCAGGTATAAGTTaGAGGGTGCACCGTGTATCC +
Preference number: 4 (lower is better)
Translates to: VQGRRGNTQHYSERTPALGSGIS*RVHRVS
Trigger: GGATACACGGTGCACCCTGCAACTTATACCTGAGCC...GAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GTCCCACAGGTCCTAGCCACAGTCTGTGGTAATGACATGCTAAACCGCCCCAAGACACTTGTGCGCGACTaGAGGCTGCCATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VPQVLATVCGNDMLNRPKTLVRD*RLPFWK
Trigger: TTTCCAAAATGGCAGCCTCCAGTCGCGCACAAGTGT...CTTGGGGCGGTTTAGCATGTCATTACCACAGACTGTGGCTAGGACCTGTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR CCA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTCCTGGCCGCCACTGGTaGCTGGTCCCCGGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: ESESAEREVLRDVFLKSSPGRHW*LVPGLL
Trigger: TAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGG...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CATTCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGATCTCAAACAGAGAGTaGATGCTGAAGGTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: HSPGVGRGLSLHFQQIPRISNRE*MLKVVP
Trigger: AGGGACCACCTTCAGCATCCACTCTCTGTTTGAGAT...CCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCAGAGTTGAACCCTTGGGAGGGGTTTATCTaGGGTCAAAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VVLELAFTKAVLVSELNPWEGFI*GQRLRE
Trigger: CTCCCTGAGCCTTTGACCCCAGATAAACCCCTCCCA...AGGGTTCAACTCTGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CTGGGTGTGTACCTACACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGGCAGTGCTCCATCTCTaGGTGTGTACCTACACACCC +
Preference number: 4 (lower is better)
Translates to: LGVYLHTRHLCCTGLRYKAVLHL*VCTYTP
Trigger: GGGTGTGTAGGTACACACCCAGAGATGGAGCACTGC...CTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGTAGGTACACACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTGGGCTTGGGTCAGGCTaGGGCTCTCTCATTCACCAG +
Preference number: 4 (lower is better)
Translates to: PSLTESESAEREVLRDVFGLGSG*GSLIHQ
Trigger: CTGGTGAATGAGAGAGCCCCAGCCTGACCCAAGCCC...AAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp AGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAACCCAGGCTTCAGGGTATaGGAGTCGCCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRGNTQHYSERTPALHSNPGFRV*ESPWAW
Trigger: CCAAGCCCAGGGCGACTCCCATACCCTGAAGCCTGG...GTTAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCCACCAGCCAGATTTaGGCACCGGTGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: EGSAERCLFKKLSNSPGASTSQI*APVLPS
Trigger: GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGA...AGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp ACTCCATGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCATGTAATTGTAGGCGCTaGAACGCTTGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: TPCCPQSQVVLELAFTKACNCRR*NACSLS
Trigger: TGAGAGAGAGCAAGCGTTTCAGCGCCTACAATTACA...TGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCATGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330636.9
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp TCCAGCAAATTCCCAGGTGGGGCTGAGGTTGCTGATCTGCAGTGCTCCATCTCTTGTAATTGTAGGCGCTaGAACGCTTGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSKFPGGAEVADLQCSISCNCRR*NACSLS
Trigger: TGAGAGAGAGCAAGCGTTTCAGCGCCTACAATTACA...AGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAATTTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330636.9
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp AAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGATCAGCTTGTCAGTTaGATACAGTTGGCCAATGTG +
Preference number: 4 (lower is better)
Translates to: KLSNSPGASVHQPDLGTGDQLVS*IQLANV
Trigger: CACATTGGCCAACTGTATTCAACTGACAAGCTGATC...ACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp GAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGTTCTCGTCTCAGAGTTaGACCCTCCCTGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ERCLFKKLSNSPGASVHQFSSQS*TLPEGP
Trigger: GGGGCCCTCAGGGAGGGTTCAACTCTGAGACGAGAA...CTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp ACTCCATGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCACAGAATAGAGAAAAATaGCTGTGCCTCACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TPCCPQSQVVLELAFTKAQNREK*LCLTPH
Trigger: GTGAGGGGTGAGGCACAGTCATTTTTCTCTATTCTG...TGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCATGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp CCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCACGAAACTCCAGCCTGTaGGGAAACCACGAACGAAAT +
Preference number: 4 (lower is better)
Translates to: PQSQVVLELAFTKAVLVSRNSSL*GNHERN
Trigger: ATTTCGTTCGTGGTTTCCGCACAGGCTGGAGTTTCG...TGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330636.9
CDS-3UTR GCA 90 bp CACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCCCCCCAGTCTCAAGTGGTaGTTGAACTTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: HLCCTGLRYKLQGAPCIPPSLKW*LNLPSP
Trigger: TGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGG...GGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp GATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGTGCCCTACTCCATGCTaGCCCCAGTCTCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: DVFLKSSPTLQVLLSTSQCPTPC*PQSQVV
Trigger: CACCACTTGAGACTGGGGGCAGCATGGAGTAGGGCA...CTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp CCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTGCCCTACTCCATGCTaGCCCCAGTCTCAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: PSLTESESAEREVLRDVFCPTPC*PQSQVV
Trigger: CACCACTTGAGACTGGGGGCAGCATGGAGTAGGGCA...AAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp GCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCCCTGCCCTACTCCATaGTGCCCCCAGTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: AERCLFKKLSNSPGASVHPCPTP*CPQSQV
Trigger: CACTTGAGACTGGGGGCAGCATGGAGTAGGGCAGGG...GTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp CAAGGTAGGAATGGGGTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAAGGCTCAGGTATAAGTTaGAGGGTGCACCGTGTATCC +
Preference number: 4 (lower is better)
Translates to: QGRNGVQGRRGNTQHYSEGSGIS*RVHRVS
Trigger: GGATACACGGTGCACCCTGCAACTTATACCTGAGCC...TTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCACCCCATTCCTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp GAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTCTGGCGGCTGTGCCTTaGTCAGCTACCTGTCGACGA +
Preference number: 4 (lower is better)
Translates to: EGSAERCLFKKLSNSPGALAAVP*SATCRR
Trigger: TCGTCGACAGGTAGCTGAGCAAGGCACAGCCGCCAG...AGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR GCA 90 bp AGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAACCTCAAGGCCAACTTGTaGAGGGCTTCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRGNTQHYSERTPALHSNLKANL*RASPGS
Trigger: GGAGCCTGGGGAAGCCCTGCACAAGTTGGCCTTGAG...GTTAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR GCA 90 bp GACTGGGGCTGGGTTGAGGGTGGAGAAGCGGGAAGACACGATAATGTAGTACTTCCTGGTTTAAACACCTaGTCTGCCAATCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: DWGWVEGGEAGRHDNVVLPGLNT*SANHWL
Trigger: GAGCCAGTGATTGGCAGAGCAGGTGTTTAAACCAGG...AAGTACTACATTATCGTGTCTTCCCGCTTCTCCACCCTCAACCCAGCCCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR CCA 90 bp AGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAACGGGCTTGGGTCAGGCTaGGGCTCTCTCATTCACCAG +
Preference number: 4 (lower is better)
Translates to: RRGNTQHYSERTPALHSNGLGSG*GSLIHQ
Trigger: CTGGTGAATGAGAGAGCCCCAGCCTGACCCAAGCCC...GTTAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTACAGTTGGCCAATGTaGACCTTGTCTTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: AAPSLKWCLNLPSPRQFSYSWPM*TLSSGQ
Trigger: TTGACCTGAAGACAAGGTCCACATTGGCCAACTGTA...CGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR TCA 90 bp TCCTTTCCTGTGGCAGAGGGCTCCGCACAGAAGAAACTCTGGTCTCTTCCTGATTGTAATTGTAGGCGCTaGAACGCTTGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SFPVAEGSAQKKLWSLPDCNCRR*NACSLS
Trigger: TGAGAGAGAGCAAGCGTTTCAGCGCCTACAATTACA...ATCAGGAAGAGACCAGAGTTTCTTCTGTGCGGAGCCCTCTGCCACAGGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR TCA 90 bp GAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTGTGTGGGGAGGGGCTTaGGCCTGCATTTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: EGSAERCLFKKLSNSPGAVWGGA*ACISSK
Trigger: TTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACAC...AGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp CGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCTCACCCCTCACTTACTaGGTCAGAATCTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RHLCCTGLRYKLQGAPCISPLTY*VRICRE
Trigger: CTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGA...GATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp TCCTTTCCTGTGGCAGAGGGCTCCGCACAGAAGAAACTCTGGTCTCTTCCTGATTCTGGTGGCAGACAATaGCTATGGACTTTATGCCTG +
Preference number: 4 (lower is better)
Translates to: SFPVAEGSAQKKLWSLPDSGGRQ*LWTLCL
Trigger: CAGGCATAAAGTCCATAGTCATTGTCTGCCACCAGA...ATCAGGAAGAGACCAGAGTTTCTTCTGTGCGGAGCCCTCTGCCACAGGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR GCA 90 bp AAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCACGAACGAAATAAAATaGTGCGGCTCGGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: KKLSNSPGASVHQPDLGTTNEIK*CGSALP
Trigger: TGGCAAAGCCGAGCCGCAGCATTTTATTTCGTTCGT...GGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330636.9
CDS-3UTR GCA 90 bp CACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCCCCAGTCTCAAGTGGTaGTTGAACTTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: HPSLTESESAEREVLRDVPSLKW*LNLPSP
Trigger: TGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGG...GACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp AAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCATCTCAAACAGAGAGTaGATGCTGAAGGTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KKLSNSPGASVHQPDLGTISNRE*MLKVVP
Trigger: AGGGACCACCTTCAGCATCCACTCTCTGTTTGAGAT...GGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTGCAGTGCTCCATCTCTaGGTGTGTACCTACACACCC +
Preference number: 4 (lower is better)
Translates to: PSLTESESAEREVLRDVFAVLHL*VCTYTP
Trigger: GGGTGTGTAGGTACACACCCAGAGATGGAGCACTGC...AAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp ACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCCCAGGCTTCAGGGTATaGGAGTCGCCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TESESAEREVLRDVFLKSPGFRV*ESPWAW
Trigger: CCAAGCCCAGGGCGACTCCCATACCCTGAAGCCTGG...GCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GTCCCACAGGTCCTAGCCACAGTCTGTGGTAATGACATGCTAAACCGCCCCAAGTACTGCTCTGAACACTaGTGGGCAAGTATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: VPQVLATVCGNDMLNRPKYCSEH*WASILL
Trigger: CAAAAGGATACTTGCCCACCAGTGTTCAGAGCAGTA...CTTGGGGCGGTTTAGCATGTCATTACCACAGACTGTGGCTAGGACCTGTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR TCA 90 bp CAAGGTAGGAATGGGGTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAACAGAATAGAGAAAAATaGCTGTGCCTCACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QGRNGVQGRRGNTQHYSEQNREK*LCLTPH
Trigger: GTGAGGGGTGAGGCACAGTCATTTTTCTCTATTCTG...TTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCACCCCATTCCTACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp AGGAATGGGGTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAACGAACTATCTCAAACAGAGAGTaGATGCTGAAGGTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RNGVQGRRGNTQHYSERTISNRE*MLKVVP
Trigger: AGGGACCACCTTCAGCATCCACTCTCTGTTTGAGAT...AGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCACCCCATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCAAGGCTATTGTAAGCTaGTTTTGGGAGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: RHLCCTGLRYKLQGAPCIKAIVS*FWEPPS
Trigger: AGATGGGGGCTCCCAAAACCAGCTTACAATAGCCTT...GATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCAGAGTTGAACCCTAAGGCTATTGTAAGCTaGTTTTGGGAGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: VVLELAFTKAVLVSELNPKAIVS*FWEPPS
Trigger: AGATGGGGGCTCCCAAAACCAGCTTACAATAGCCTT...AGGGTTCAACTCTGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TCCTTTCCTGTGGCAGAGGGCTCCGCACAGAAGAAACTCTGGTCTCTTCCTGATGCACAGAAGAAACTCTaGTCTCTTCCTGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: SFPVAEGSAQKKLWSLPDAQKKL*SLPDVS
Trigger: AGAGACATCAGGAAGAGACCAGAGTTTCTTCTGTGC...ATCAGGAAGAGACCAGAGTTTCTTCTGTGCGGAGCCCTCTGCCACAGGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR CCA 90 bp AGACTTCCTTCCTTTCCTGTGGCAGAGGGCTCCGCACAGAAGAAACTCTGGTCTTGCTCTGAACACTGGTaGGCAAGTATCCTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RLPSFPVAEGSAQKKLWSCSEHW*ASILLS
Trigger: ACTCAAAAGGATACTTGCCCACCAGTGTTCAGAGCA...AGACCAGAGTTTCTTCTGTGCGGAGCCCTCTGCCACAGGAAAGGAAGGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR TCA 90 bp ACTCCATGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCATGTCTCGATTCTCAATaGTCAGCTTGTCAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: TPCCPQSQVVLELAFTKACLDSQ*SACQLN
Trigger: ATTCAACTGACAAGCTGATCATTGAGAATCGAGACA...TGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCATGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp TGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATGTCTCAAGTGGTGCTTaGACTTGCCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: CLFKKLSNSPGASVHQPDVSSGA*TCLHQG
Trigger: GCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGAC...ATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp TTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCCAGAATAGAGAAAAATaGCTGTGCCTCACCCCTCAC +
Preference number: 4 (lower is better)
Translates to: FKKLSNSPGASVHQPDLGQNREK*LCLTPH
Trigger: GTGAGGGGTGAGGCACAGTCATTTTTCTCTATTCTG...GCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp TCCTTTCCTGTGGCAGAGGGCTCCGCACAGAAGAAACTCTGGTCTCTTCCTGATACTCTGGTCTCTTCCTaGTGTCTCTTAACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: SFPVAEGSAQKKLWSLPDTLVSS*CLLTAL
Trigger: TAAAGCTGTTAAGAGACATCAGGAAGAGACCAGAGT...ATCAGGAAGAGACCAGAGTTTCTTCTGTGCGGAGCCCTCTGCCACAGGAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR GCA 90 bp GGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTACCCAGTCTCAAGTGGTaGTTGAACTTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GDVVTHSTILNELQLSILPSLKW*LNLPSP
Trigger: TGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGG...TAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp GCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACGGCTCAGGTATAAGTTaGAGGGTGCACCGTGTATCC +
Preference number: 4 (lower is better)
Translates to: AERCLFKKLSNSPGASVHGSGIS*RVHRVS
Trigger: GGATACACGGTGCACCCTGCAACTTATACCTGAGCC...GTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TCTCGATTCTCAATGATCAGCTTGTCAGTTGAATACAGTTGGCCAATGTGGACCGCAGTGCTCCATCTCTaGGTGTGTACCTACACACCC +
Preference number: 4 (lower is better)
Translates to: SRFSMISLSVEYSWPMWTAVLHL*VCTYTP
Trigger: GGGTGTGTAGGTACACACCCAGAGATGGAGCACTGC...GGTCCACATTGGCCAACTGTATTCAACTGACAAGCTGATCATTGAGAATCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463032.5
ENST00000464010.5
CDS-3UTR TCA 90 bp TGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTCACCCCTCACTTACTaGGTCAGAATCTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: CLFKKLSNSPGASVHQPDSPLTY*VRICRE
Trigger: CTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGA...ATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp CGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCAGTTGGTTAAACATTaGAAACAGTGGGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RHLCCTGLRYKLQGAPCIQLVKH*KQWESF
Trigger: GAAGCTCTCCCACTGTTTTCAATGTTTAACCAACTG...GATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp CAAGGTAGGAATGGGGTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAACAGTTGGTTAAACATTaGAAACAGTGGGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QGRNGVQGRRGNTQHYSEQLVKH*KQWESF
Trigger: GAAGCTCTCCCACTGTTTTCAATGTTTAACCAACTG...TTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCACCCCATTCCTACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp CAATCCCAGGTGTTGTCAAAGAAGGTGGCATTTACAAATGAGTCCCACAGGTCCGGGCAAGTATCCTTTTaGGTCCCTGCTTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QSQVLSKKVAFTNESHRSGQVSF*VPAFSS
Trigger: AGAACTGAAAGCAGGGACTCAAAAGGATACTTGCCC...GGACCTGTGGGACTCATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR GCA 90 bp GAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCCAGTCTCAAGTGGTaGTTGAACTTGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: ERCLFKKLSNSPGASVHQPSLKW*LNLPSP
Trigger: TGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGG...CTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp AGGAATGGGGTGCAGGGGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCTCCAAGGTCTCTCTTaGCTTTATTCACTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: RNGVQGRRGNTQHYSERTLQGLS*LYSLGF
Trigger: AAACCCTAGTGAATAAAGCCAAGAGAGACCTTGGAG...AGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCCCCTGCACCCCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
CDS-3UTR CCA 90 bp AAAATGACTGTGCCTCACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAATCTCAAACAGAGAGTaGATGCTGAAGGTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KMTVPHPSLTESESAEREISNRE*MLKVVP
Trigger: AGGGACCACCTTCAGCATCCACTCTCTGTTTGAGAT...TTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTGAGGCACAGTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTGCAGTGCTCCATCTCTaGGTGTGTACCTACACACCC +
Preference number: 4 (lower is better)
Translates to: ESESAEREVLRDVFLKSSAVLHL*VCTYTP
Trigger: GGGTGTGTAGGTACACACCCAGAGATGGAGCACTGC...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TGGGTTGAGGGTGGAGAAGCGGGAAGACACGATAATGTAGTACTTAAGAGCCTGCACCATCAAATCTGGTaGCAGACAATGACTATGGAC +
Preference number: 4 (lower is better)
Translates to: WVEGGEAGRHDNVVLKSLHHQIW*QTMTMD
Trigger: GTCCATAGTCATTGTCTGCCACCAGATTTGATGGTG...CAGGCTCTTAAGTACTACATTATCGTGTCTTCCCGCTTCTCCACCCTCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR GCA 90 bp TCTCCAGGCCTTGTATCAGTAGGAAATGAAAATGCATTAATTGGGAGGGGTTTACTCCAACTCTCCAGGTaGTTCTGTCCACCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SPGLVSVGNENALIGRGLLQLSR*FCPPAR
Trigger: TCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAG...TAAACCCCTCCCAATTAATGCATTTTCATTTCCTACTGATACAAGGCCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp AACGAACTCCAGCTCTCCATTCTAACACTTGAACCAAGGAAAGACAGCAGTCCTAAGGCTATTGTAAGCTaGTTTTGGGAGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: NELQLSILTLEPRKDSSPKAIVS*FWEPPS
Trigger: AGATGGGGGCTCCCAAAACCAGCTTACAATAGCCTT...AGGACTGCTGTCTTTCCTTGGTTCAAGTGTTAGAATGGAGAGCTGGAGTTCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTGCCCCCAGTCTCAAGTaGTGCTTGAACTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ESESAEREVLRDVFLKSSAPSLK*CLNLPS
Trigger: TGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGC...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp AGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAACTACAGTTGGCCAATGTaGACCTGTAATTGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: RRGNTQHYSERTPALHSNYSWPM*TCNCRR
Trigger: GCGCCTACAATTACAGGTCCACATTGGCCAACTGTA...GTTAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468929.5
CDS-3UTR TCA 90 bp GTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAACACTTGAACACACAGCACTATTCTaGACGAACTCCAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VTHSTILNELQLSILTLEHTALF*TNSSSP
Trigger: TGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTG...TTCAAGTGTTAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TCAAAGGCTCAGGGAGATCATTCTTTTTATTGCCAAGGACCAAGAAACAAAGTGGCCCCCAGTCTCAAGTaGTGCTTGAACTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SKAQGDHSFYCQGPRNKVAPSLK*CLNLPS
Trigger: TGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGC...CACTTTGTTTCTTGGTCCTTGGCAATAAAAAGAATGATCTCCCTGAGCCTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp TTACTTCCATTTCAACAATCCCAGGTGTTGTCAAAGAAGGTGGCATTTACAAATCTTTTTGACTGGGGCTaGGTTGAGGGTGGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: LLPFQQSQVLSKKVAFTNLFDWG*VEGGEA
Trigger: CGCTTCTCCACCCTCAACCCAGCCCCAGTCAAAAAG...ATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTGTTGAAATGGAAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR CCA 90 bp GAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTCTTACAGTTGGCCAATGTaGACCTGTCGACGAATTACT +
Preference number: 4 (lower is better)
Translates to: ESESAEREVLRDVFLKSSYSWPM*TCRRIT
Trigger: AGTAATTCGTCGACAGGTCCACATTGGCCAACTGTA...AGAGCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330636.9
CDS-3UTR CCA 90 bp CTCAGGGAGATCATTCTTTTTATTGCCAAGGACCAAGAAACAAAGTGTAGAAATGCCCCCAGTCTCAAGTaGTGCTTGAACTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LREIILFIAKDQETKCRNAPSLK*CLNLPS
Trigger: TGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGC...ATTTCTACACTTTGTTTCTTGGTCCTTGGCAATAAAAAGAATGATCTCCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CCA 90 bp CTCAGGGAGATCATTCTTTTTATTGCCAAGGACCAAGAAACAAAGTGTAGAAATTTTGAACCTGGGAGGTaGAGGTTGCTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: LREIILFIAKDQETKCRNFEPGR*RLLRSR
Trigger: GCGTGATCTCAGCAACCTCCACCTCCCAGGTTCAAA...ATTTCTACACTTTGTTTCTTGGTCCTTGGCAATAAAAAGAATGATCTCCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR CCA 90 bp CTCAGGGAGATCATTCTTTTTATTGCCAAGGACCAAGAAACAAAGTGTAGAAATACACTTGTGCGCGACTaGAGGCTGCCATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LREIILFIAKDQETKCRNTLVRD*RLPFWK
Trigger: TTTCCAAAATGGCAGCCTCCAGTCGCGCACAAGTGT...ATTTCTACACTTTGTTTCTTGGTCCTTGGCAATAAAAAGAATGATCTCCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330636.9
ENST00000468929.5
CDS-3UTR TCA 90 bp TCTCCAGGCCTTGTATCAGTAGGAAATGAAAATGCATTAATTGGGAGGGGTTTACAGTTGGTTAAACATTaGAAACAGTGGGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SPGLVSVGNENALIGRGLQLVKH*KQWESF
Trigger: GAAGCTCTCCCACTGTTTTCAATGTTTAACCAACTG...TAAACCCCTCCCAATTAATGCATTTTCATTTCCTACTGATACAAGGCCTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR GCA 90 bp TTACTTCCATTTCAACAATCCCAGGTGTTGTCAAAGAAGGTGGCATTTACAAATATCCTTTTGAGTCCCTaGTTTCAGTTCTCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LLPFQQSQVLSKKVAFTNILLSP*FQFSGV
Trigger: TACCCCAGAGAACTGAAAGCAGGGACTCAAAAGGAT...ATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTGTTGAAATGGAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480566.5
3UTR CAA 72 bp AGTAATCGATTACTTCCATTTCAACAATCCCAGGTGTaGTCAAAGAAGGTGGCATTTACAAATGAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SNRLLPFQQSQV*SKKVAFTNESH
Trigger: GTGGGACTCATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTGTTGAAATGGAAGTAATCGATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR TCA 90 bp CTCAGGGAGATCATTCTTTTTATTGCCAAGGACCAAGAAACAAAGTGTAGAAATCAGTTGGTTAAACATTaGAAACAGTGGGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LREIILFIAKDQETKCRNQLVKH*KQWESF
Trigger: GAAGCTCTCCCACTGTTTTCAATGTTTAACCAACTG...ATTTCTACACTTTGTTTCTTGGTCCTTGGCAATAAAAAGAATGATCTCCCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR TCA 90 bp GCACACAGCTTTCAATTAATGGCTTCTAGTAATCGATTACTTCCATTTCAACAACTCTGGGGTATATACTaGGAAATGGAATCACTAGAT +
Preference number: 4 (lower is better)
Translates to: AHSFQLMASSNRLLPFQQLWGIY*EMESLD
Trigger: ATCTAGTGATTCCATTTCTCAGTATATACCCCAGAG...TTGTTGAAATGGAAGTAATCGATTACTAGAAGCCATTAATTGAAAGCTGTGTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS GCA 90 bp CTCGGCTTTGCCAGCGGGCCGGGCCTAAGCCTAAGCGGGCAGCCCTaGGGATCGCGGACGGCGCCAGGCGTCCCGCGCCGCTTCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LGFASGPGLSLSGQP*GSRTAPGVPRRFGG
Trigger: GCCCCCGAAGCGGCGCGGGACGCCTGGCGCCGTCCGCGATCCGCAGGGCTGCCCGCTTAGGCTTAGGCCCGGCCCGCTGGCAAAGCCGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330636.9
CDS-3UTR CAA 90 bp AAGGTGGTCCCTGGCCGCCACTGGTGGCTGGTCCCCGGCTTGCTAGGTCCTGGGGGTGTGGGGAGGGGCTaGAGCCTGCATTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: KVVPGRHWWLVPGLLGPGGVGRG*SLHFQQ
Trigger: TTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACC...CCCAGGACCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp AGAGTGGATGCTGAAGGTGGTCCCTGGCCGCCACTGGTGGCTGGTCCCCGGCTTCCTGGCGGCTGTGCCTaGCTCAGCTACCTGTCGACG +
Preference number: 5 (lower is better)
Translates to: RVDAEGGPWPPLVAGPRLPGGCA*LSYLST
Trigger: CGTCGACAGGTAGCTGAGCAAGGCACAGCCGCCAGG...AAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTCAGCATCCACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR CAA 90 bp GTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGCTGCCCAGCATGCCCCAGGTCCACCAGCCAGATTaGGGCACCGGTGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VLLSTSQIWAPVLPSMPQVHQPD*GTGAAQ
Trigger: CTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGAC...CTGGGGCATGCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp GAAGGTGGTCCCTGGCCGCCACTGGTGGCTGGTCCCCGGCTTGCTAGGTCCTGGGGGCTCAGGTATAAGTaGCAGGGTGCACCGTGTATC +
Preference number: 5 (lower is better)
Translates to: EGGPWPPLVAGPRLARSWGLRYK*QGAPCI
Trigger: GATACACGGTGCACCCTGCAACTTATACCTGAGCCC...CCAGGACCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGACCACCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS GCA 90 bp GGTTTCCTCAAGGCCAACTTGTGCAGGGCTTCCCCAGGCTCCGGCTaGTGTTCCCCGACTTCCTCCTGGCGGCTGTGCCTTGCTCAGCTA +
Preference number: 5 (lower is better)
Translates to: GFLKANLCRASPGSG*CSPTSSWRLCLAQL
Trigger: TAGCTGAGCAAGGCACAGCCGCCAGGAGGAAGTCGGGGAACAGCAGCCGGAGCCTGGGGAAGCCCTGCACAAGTTGGCCTTGAGGAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR CAA 90 bp ACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGCTGCCCAGCCCTGGGAGGTGGAGGTaGCTGAGATCACGCCACTGC +
Preference number: 5 (lower is better)
Translates to: TLQVLLSTSQIWAPVLPSPGRWR*LRSRHC
Trigger: GCAGTGGCGTGATCTCAGCAACCTCCACCTCCCAGG...GCTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS CCA 90 bp TGCAGGGCTTCCCCAGGCTCCGGCTGCTGTTCCCCGACTTCCTCCTaGCGGCTGTGCCTTGCTCAGCTACCTGTCGACGAATTACTCCAA +
Preference number: 5 (lower is better)
Translates to: CRASPGSGCCSPTSS*RLCLAQLPVDELLQ
Trigger: TTGGAGTAATTCGTCGACAGGTAGCTGAGCAAGGCACAGCCGCCAGGAGGAAGTCGGGGAACAGCAGCCGGAGCCTGGGGAAGCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR CAA 90 bp GTCCCTGGCCGCCACTGGTGGCTGGTCCCCGGCTTGCTAGGTCCTGGGCATGTCAAGTGGTGCTTGAACTaGCCTTCACCAAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: VPGRHWWLVPGLLGPGHVKWCLN*PSPRQF
Trigger: GAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTT...GACATGCCCAGGACCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp TGGCCGCCACTGGTGGCTGGTCCCCGGCTTGCTAGGTCCTGGGCATGTCTCGATTGGCCAATGTGGACCTaGTCTTCAGGTCAAGGCGAA +
Preference number: 5 (lower is better)
Translates to: WPPLVAGPRLARSWACLDWPMWT*SSGQGE
Trigger: TTCGCCTTGACCTGAAGACAAGGTCCACATTGGCCA...ATCGAGACATGCCCAGGACCTAGCAAGCCGGGGACCAGCCACCAGTGGCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS GCA 90 bp AGGAAGAGCAAACGTCTGTCAGGTGGTTTCCTCAAGGCCAACTTGTaGAGGGCTTCCCCAGGCTCCGGCTGCTGTTCCCCGACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RKSKRLSGGFLKANL*RASPGSGCCSPTSS
Trigger: GGAGGAAGTCGGGGAACAGCAGCCGGAGCCTGGGGAAGCCCTGCACAAGTTGGCCTTGAGGAAACCACCTGACAGACGTTTGCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS-3UTR CAA 90 bp CACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGGCTGGTCCCCGGCTaGCTAGGTCCTGGGCATGTC +
Preference number: 5 (lower is better)
Translates to: HTRHLCCTGLRYKLQGAPWLVPG*LGPGHV
Trigger: GACATGCCCAGGACCTAGCAAGCCGGGGACCAGCCA...CGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp TCCAGCAAATTCCCAGGTGGGGCTGAGGTTGCTGATCTGCAGTGCTCCATCTCTGTCCACCAGCCAGATTaGGGCACCGGTGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSKFPGGAEVADLQCSISVHQPD*GTGAAQ
Trigger: CTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGAC...AGAGATGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTGGGAATTTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp AAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTCCACCAGCCAGATTaGGGCACCGGTGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: KSSPTLQVLLSTSQIWAPVHQPD*GTGAAQ
Trigger: CTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGAC...CGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS CCA 90 bp GCCAATGTGGACCAGCTCTGTGAGGAAGAGCAAACGTCTGTCAGGTaGTTTCCTCAAGGCCAACTTGTGCAGGGCTTCCCCAGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: ANVDQLCEEEQTSVR*FPQGQLVQGFPRLR
Trigger: CCGGAGCCTGGGGAAGCCCTGCACAAGTTGGCCTTGAGGAAACCACCTGACAGACGTTTGCTCTTCCTCACAGAGCTGGTCCACATTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS GCA 90 bp TCGCCGAGGTCCCAAGTACGACCCAACCCACGAAACTCCAGCCTGTaGGGAAACCACGAACGAAATAAAATGCTGCGGCTCGGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: SPRSQVRPNPRNSSL*GNHERNKMLRLGFA
Trigger: GGCAAAGCCGAGCCGCAGCATTTTATTTCGTTCGTGGTTTCCGCACAGGCTGGAGTTTCGTGGGTTGGGTCGTACTTGGGACCTCGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330636.9
CDS-3UTR CAA 90 bp TGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCCAGGTGGGGCTGAGGTaGCTGATCTGCAGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: CCPQSQVVLELAFTKAVLQVGLR*LICSAP
Trigger: TGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTG...GAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp AAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTGGGCTCAGGTATAAGTaGCAGGGTGCACCGTGTATC +
Preference number: 5 (lower is better)
Translates to: KLSNSPGASVHQPDLGTGGLRYK*QGAPCI
Trigger: GATACACGGTGCACCCTGCAACTTATACCTGAGCCC...ACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp TCACCAGGTGTGGGGAGGGGCTTGAGCCTGCATTTCCAGCAAATTCCCAGGTGGACACACCCGTCACCTTaGTTGTACTGGGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: SPGVGRGLSLHFQQIPRWTHPSP*LYWAQV
Trigger: TACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGT...CCACCTGGGAATTTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACCTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCCCGGTGTGGGGAGGGGCTaGAGCCTGCATTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: HLCCTGLRYKLQGAPCIPGVGRG*SLHFQQ
Trigger: TTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACC...GGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCAGGTGTGGGGAGGGGCTaGAGCCTGCATTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: PQSQVVLELAFTKAVLVSGVGRG*SLHFQQ
Trigger: TTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACC...TGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCATTCCTCAAGGCCAACTaGTGCAGGGCTTCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PQSQVVLELAFTKAVLVSFLKAN*CRASPG
Trigger: GCCTGGGGAAGCCCTGCACAAGTTGGCCTTGAGGAA...TGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS CCA 90 bp CTGGAGTTCAGTGGCGTGATCCCGGCTCATTGCAACCTCTGCCTCTaGCTTCAAGCAATTCTCTGCCTCAGTCTCCTGAGTAGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: LEFSGVIPAHCNLCL*LQAILCLSLLSSWD
Trigger: ATCCCAGCTACTCAGGAGACTGAGGCAGAGAATTGCTTGAAGCCAGAGGCAGAGGTTGCAATGAGCCGGGATCACGCCACTGAACTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606472.1
CDS-3UTR CAA 90 bp AAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTACACACCCGTCACCTTaGTTGTACTGGGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: KLSNSPGASVHQPDLGTGTHPSP*LYWAQV
Trigger: TACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGT...ACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CTGGGTGTGTACCTACACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGGGTGTGGGGAGGGGCTaGAGCCTGCATTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: LGVYLHTRHLCCTGLRYKGVGRG*SLHFQQ
Trigger: TTGCTGGAAATGCAGGCTCAAGCCCCTCCCCACACC...CTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGTAGGTACACACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp AAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCACCGGTAGTCTCAAGTGGTGCTaGAACTTGCCTTCACCAAGG +
Preference number: 5 (lower is better)
Translates to: KLSNSPGASVHQPDLGTGSLKWC*NLPSPR
Trigger: CCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACT...ACCGGTGCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp TTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGCCAGATTTGGGCCAGGTGGGGCTGAGGTaGCTGATCTGCAGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: FKKLSNSPGASVHQPDLGQVGLR*LICSAP
Trigger: TGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTG...GCCCAAATCTGGCTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp GAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGGTCCACCAGCCAGATTaGGGCACCGGTGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: ERCLFKKLSNSPGASVHQVHQPD*GTGAAQ
Trigger: CTGGGCAGCACCGGTGCCCAAATCTGGCTGGTGGAC...CTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGAGTCTCAAGTGGTGCTaGAACTTGCCTTCACCAAGG +
Preference number: 5 (lower is better)
Translates to: HTRHLCCTGLRYKLQGAPSLKWC*NLPSPR
Trigger: CCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACT...CGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CACCCCTCACTTACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCGGGCTCAGGTATAAGTaGCAGGGTGCACCGTGTATC +
Preference number: 5 (lower is better)
Translates to: HPSLTESESAEREVLRDVGLRYK*QGAPCI
Trigger: GATACACGGTGCACCCTGCAACTTATACCTGAGCCC...GACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGTAAGTGAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTCGTCTCAACACACCCGTCACCTTaGTTGTACTGGGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: PQSQVVLELAFTKAVLVSTHPSP*LYWAQV
Trigger: TACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGT...TGAGACGAGAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp GGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTACAGGTGGGGCTGAGGTaGCTGATCTGCAGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: GDVVTHSTILNELQLSILQVGLR*LICSAP
Trigger: TGGAGCACTGCAGATCAGCAACCTCAGCCCCACCTG...TAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp ACCTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCCCGAGGCAGAAGAATGGTTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TFVVLGSGISCRVHRVSPRQKNG*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAACCATTCTTCTGCCT...CGGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463032.5
CDS-3UTR CAA 90 bp CTGGGTGTGTACCTACACACCCGTCACCTTTGTTGTACTGGGCTCAGGTATAAGAAGTGGTGCTTGAACTaGCCTTCACCAAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LGVYLHTRHLCCTGLRYKKWCLN*PSPRQF
Trigger: GAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTT...CTTATACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGTAGGTACACACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CATGCTGCCCCCAGTCTCAAGTGGTGCTTGAACTTGCCTTCACCAAGGCAGTTCTTCTCAATGATCAGCTaGTCAGTTGAATACAGTTGG +
Preference number: 5 (lower is better)
Translates to: HAAPSLKWCLNLPSPRQFFSMIS*SVEYSW
Trigger: CCAACTGTATTCAACTGACAAGCTGATCATTGAGAA...GAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTTGAGACTGGGGGCAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp GGAGACGTGGTAACACACAGCACTATTCTGAACGAACTCCAGCTCTCCATTCTAAAGTGGTGCTTGAACTaGCCTTCACCAAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: GDVVTHSTILNELQLSILKWCLN*PSPRQF
Trigger: GAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTT...TAGAATGGAGAGCTGGAGTTCGTTCAGAATAGTGCTGTGTGTTACCACGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp AACGAACTCCAGCTCTCCATTCTAACACTTGAACCAAGGAAAGACAGCAGTCCTACACACCCGTCACCTTaGTTGTACTGGGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: NELQLSILTLEPRKDSSPTHPSP*LYWAQV
Trigger: TACCTGAGCCCAGTACAACAAAGGTGACGGGTGTGT...AGGACTGCTGTCTTTCCTTGGTTCAAGTGTTAGAATGGAGAGCTGGAGTTCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp GAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACCAGAAGTGGTGCTTGAACTaGCCTTCACCAAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: ERCLFKKLSNSPGASVHQKWCLN*PSPRQF
Trigger: GAACTGCCTTGGTGAAGGCAAGTTCAAGCACCACTT...CTGGTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CTTTGTTGTACTGGGCTCAGGTATAAGTTGCAGGGTGCACCGTGTATCCCCGTATTCTCAATGATCAGCTaGTCAGTTGAATACAGTTGG +
Preference number: 5 (lower is better)
Translates to: LCCTGLRYKLQGAPCIPVFSMIS*SVEYSW
Trigger: CCAACTGTATTCAACTGACAAGCTGATCATTGAGAA...TACGGGGATACACGGTGCACCCTGCAACTTATACCTGAGCCCAGTACAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp TCAAAGGCTCAGGGAGATCATTCTTTTTATTGCCAAGGACCAAGAAACAAAGTGGGGCTCAGGTATAAGTaGCAGGGTGCACCGTGTATC +
Preference number: 5 (lower is better)
Translates to: SKAQGDHSFYCQGPRNKVGLRYK*QGAPCI
Trigger: GATACACGGTGCACCCTGCAACTTATACCTGAGCCC...CACTTTGTTTCTTGGTCCTTGGCAATAAAAAGAATGATCTCCCTGAGCCTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp CAATCCCAGGTGTTGTCAAAGAAGGTGGCATTTACAAATGAGTCCCACAGGTCCCTTCTAAATGATAACTaGTCCCCTTTCCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: QSQVLSKKVAFTNESHRSLLNDN*SPFLLP
Trigger: AGGCAGCAGGAAAGGGGACAAGTTATCATTTAGAAG...GGACCTGTGGGACTCATTTGTAAATGCCACCTTCTTTGACAACACCTGGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS-3UTR CAA 90 bp GCTGAGAGATGTCTTTTTAAAAAGCTCTCCAACTCTCCAGGTGCTTCTGTCCACTTCTCAATGATCAGCTaGTCAGTTGAATACAGTTGG +
Preference number: 5 (lower is better)
Translates to: AERCLFKKLSNSPGASVHFSMIS*SVEYSW
Trigger: CCAACTGTATTCAACTGACAAGCTGATCATTGAGAA...GTGGACAGAAGCACCTGGAGAGTTGGAGAGCTTTTTAAAAAGACATCTCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp ACTGAGTCAGAATCTGCAGAGAGGGAAGTGCTGAGAGATGTCTTTTTAAAAAGCTTCTCAATGATCAGCTaGTCAGTTGAATACAGTTGG +
Preference number: 5 (lower is better)
Translates to: TESESAEREVLRDVFLKSFSMIS*SVEYSW
Trigger: CCAACTGTATTCAACTGACAAGCTGATCATTGAGAA...GCTTTTTAAAAAGACATCTCTCAGCACTTCCCTCTCTGCAGATTCTGACTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330636.9
ENST00000463032.5
ENST00000464010.5
ENST00000468929.5
CDS-3UTR CAA 90 bp GCACACAGCTTTCAATTAATGGCTTCTAGTAATCGATTACTTCCATTTCAACAATGGGCAAGTATCCTTTaGAGTCCCTGCTTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: AHSFQLMASSNRLLPFQQWASIL*SPCFQF
Trigger: GAACTGAAAGCAGGGACTCAAAAGGATACTTGCCCA...TTGTTGAAATGGAAGTAATCGATTACTAGAAGCCATTAATTGAAAGCTGTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480566.5
CDS GCA 72 bp AAGGCCAACTTGTGCAGGGCTTCCCCAGGCTCCGGCTaGTGTTCCCCGACTTCCTCCTGGCGGCTGTGCCTT +
Preference number: 6 (lower is better)
Translates to: KANLCRASPGSG*CSPTSSWRLCL
Trigger: AAGGCACAGCCGCCAGGAGGAAGTCGGGGAACAGCAGCCGGAGCCTGGGGAAGCCCTGCACAAGTTGGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS CCA 72 bp TCCCCAGGCTCCGGCTGCTGTTCCCCGACTTCCTCCTaGCGGCTGTGCCTTGCTCAGCTACCTGTCGACGAA +
Preference number: 6 (lower is better)
Translates to: SPGSGCCSPTSS*RLCLAQLPVDE
Trigger: TTCGTCGACAGGTAGCTGAGCAAGGCACAGCCGCCAGGAGGAAGTCGGGGAACAGCAGCCGGAGCCTGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS GCA 72 bp AAACGTCTGTCAGGTGGTTTCCTCAAGGCCAACTTGTaGAGGGCTTCCCCAGGCTCCGGCTGCTGTTCCCCG +
Preference number: 6 (lower is better)
Translates to: KRLSGGFLKANL*RASPGSGCCSP
Trigger: CGGGGAACAGCAGCCGGAGCCTGGGGAAGCCCTGCACAAGTTGGCCTTGAGGAAACCACCTGACAGACGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS CAA 90 bp GTGAGGAAGAGCAAACGTCTGTCAGGTGGTTTCCTCAAGGCCAACTaGTGCAGGGCTTCCCCAGGCTCCGGCTGCTGTTCCCCGACTTCC +
Preference number: 6 (lower is better)
Translates to: VRKSKRLSGGFLKAN*CRASPGSGCCSPTS
Trigger: GGAAGTCGGGGAACAGCAGCCGGAGCCTGGGGAAGCCCTGCACAAGTTGGCCTTGAGGAAACCACCTGACAGACGTTTGCTCTTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS GCA 72 bp TCCGGCTGCTGTTCCCCGACTTCCTCCTGGCGGCTGTaGCTTGCTCAGCTACCTGTCGACGAATTACTCCAA +
Preference number: 6 (lower is better)
Translates to: SGCCSPTSSWRL*LAQLPVDELLQ
Trigger: TTGGAGTAATTCGTCGACAGGTAGCTGAGCAAGGCACAGCCGCCAGGAGGAAGTCGGGGAACAGCAGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS CAA 72 bp AGCAAACGTCTGTCAGGTGGTTTCCTCAAGGCCAACTaGTGCAGGGCTTCCCCAGGCTCCGGCTGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: SKRLSGGFLKAN*CRASPGSGCCS
Trigger: GGAACAGCAGCCGGAGCCTGGGGAAGCCCTGCACAAGTTGGCCTTGAGGAAACCACCTGACAGACGTTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS CCA 72 bp GACCAGCTCTGTGAGGAAGAGCAAACGTCTGTCAGGTaGTTTCCTCAAGGCCAACTTGTGCAGGGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: DQLCEEEQTSVR*FPQGQLVQGFP
Trigger: GGGGAAGCCCTGCACAAGTTGGCCTTGAGGAAACCACCTGACAGACGTTTGCTCTTCCTCACAGAGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464010.5
CDS GCA 72 bp GAGTTCAGTGGCGTGATCCCGGCTCATTGCAACCTCTaGCTCTGGCTTCAAGCAATTCTCTGCCTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: EFSGVIPAHCNL*LWLQAILCLSL
Trigger: GAGACTGAGGCAGAGAATTGCTTGAAGCCAGAGGCAGAGGTTGCAATGAGCCGGGATCACGCCACTGAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606472.1
CDS GCA 72 bp TCCCAAGTACGACCCAACCCACGAAACTCCAGCCTGTaGGGAAACCACGAACGAAATAAAATGCTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: SQVRPNPRNSSL*GNHERNKMLRL
Trigger: GAGCCGCAGCATTTTATTTCGTTCGTGGTTTCCGCACAGGCTGGAGTTTCGTGGGTTGGGTCGTACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330636.9
CDS CCA 72 bp CGATTCTCAATGATCAGCTTGTCAGTTGAATACAGTTaGCCAATGTGGACCTTTGTGAAGCACCATGGGGAG +
Preference number: 6 (lower is better)
Translates to: RFSMISLSVEYS*PMWTFVKHHGE
Trigger: CTCCCCATGGTGCTTCACAAAGGTCCACATTGGCCAACTGTATTCAACTGACAAGCTGATCATTGAGAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458438.2