RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYRM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000083099

Ensembl transcript IDs: ENST00000412237.6, ENST00000517396.5, ENST00000520318.1, ENST00000520441.5, ENST00000520897.5, ENST00000523075.1, ENST00000523377.2, ENST00000523793.5, ENST00000626778.2

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGGGGAACACGGAGATCATCGCGGCGCTCATCCACGAAGGGTGTaGCCTGTCTCCGAGTCCCCGTGGTGCCCAGGACAAGACCTAGGA +
Preference number: 1 (lower is better)
Translates to: GGEHGDHRGAHPRRV*PVSESPWCPGQDLG
Trigger: TCCTAGGTCTTGTCCTGGGCACCACGGGGACTCGGAGACAGGGCACACCCTTCGTGGATGAGCGCCGCGATGATCTCCGTGTTCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CCA 90 bp GTGTCACTTTGCAGGGGGACCAGACCGCCTTGCACCGGGCCACAGTaGTGGGGAACACGGAGATCATCGCGGCGCTCATCCACGAAGGGT +
Preference number: 1 (lower is better)
Translates to: VSLCRGTRPPCTGPQ*WGTRRSSRRSSTKG
Trigger: ACCCTTCGTGGATGAGCGCCGCGATGATCTCCGTGTTCCCCACCACTGTGGCCCGGTGCAAGGCGGTCTGGTCCCCCTGCAAAGTGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR TCA 90 bp AGTGGCATGATCACACCTCACTGCAGCCTTGGCCTCTCAGGCTCGTaGTCCTCCTGCCTCAACCTCGCAAGTAGCTTGGGACTACAGGCG +
Preference number: 1 (lower is better)
Translates to: SGMITPHCSLGLSGS*SSCLNLASSLGLQA
Trigger: CGCCTGTAGTCCCAAGCTACTTGCGAGGTTGAGGCAGGAGGATCACGAGCCTGAGAGGCCAAGGCTGCAGTGAGGTGTGATCATGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR GCA 90 bp AGCCATGCACAGCCCAGGCCTCCTGACCCCTTGTCTCGTGCTCATTaGTTTCCACCAGAACATTTCCACACTGCCCACCCATCCTCCCTT +
Preference number: 1 (lower is better)
Translates to: SHAQPRPPDPLSRAH*FPPEHFHTAHPSSL
Trigger: AAGGGAGGATGGGTGGGCAGTGTGGAAATGTTCTGGTGGAAAGCAATGAGCACGAGACAAGGGGTCAGGAGGCCTGGGCTGTGCATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CCA 90 bp CCTGCCCTCACACCCACTCTTCACACCTGTGATAGTCATAGCCCCTaGATGGCAGGAGAGAGCCTGACCCTCATTTTGAGGTTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: PALTPTLHTCDSHSP*MAGESLTLILRLAL
Trigger: CAGAGCCAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATCACAGGTGTGAAGAGTGGGTGTGAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 90 bp CCCCTTGTCTCGTGCTCATTGCTTTCCACCAGAACATTTCCACACTaGCCACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTT +
Preference number: 1 (lower is better)
Translates to: PLVSCSLLSTRTFPH*PPILPFKAGPQAQL
Trigger: AAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTGGGCAGTGTGGAAATGTTCTGGTGGAAAGCAATGAGCACGAGACAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 90 bp CCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTaGTGCTTTAATTGCATAGCACACACCTGCCCTCACACCCACTCT +
Preference number: 1 (lower is better)
Translates to: PLQAGNSAGSRDSRH*CFNCIAHTCPHTHS
Trigger: AGAGTGGGTGTGAGGGCAGGTGTGTGCTATGCAATTAAAGCAGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 90 bp CATTTGGCCTCTGGCCTCGGTTCCTCTTCACTTCAGCATGGGTTTTaGAGAATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGTCCC +
Preference number: 1 (lower is better)
Translates to: HLASGLGSSSLQHGF*RIFSGNPSCLSPSP
Trigger: GGGACTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGAGGCCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR GCA 90 bp CTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTaGTTTAATTGCATAGCACACACCTGCCCTCACACCCACTCTTCA +
Preference number: 1 (lower is better)
Translates to: LQAGNSAGSRDSRHC*FNCIAHTCPHTHSS
Trigger: TGAAGAGTGGGTGTGAGGGCAGGTGTGTGCTATGCAATTAAAGCAGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 90 bp GTTTCTTATCTTTCTAGCCTTCTCTCCAGGAGCTCTCTGCTAAGGTaGATTTGGCCTCTGGCCTCGGTTCCTCTTCACTTCAGCATGGGT +
Preference number: 1 (lower is better)
Translates to: VSYLSSLLSRSSLLR*IWPLASVPLHFSMG
Trigger: ACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGAGGCCAAATGCACCTTAGCAGAGAGCTCCTGGAGAGAAGGCTAGAAAGATAAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR CCA 90 bp TATCTTTCTAGCCTTCTCTCCAGGAGCTCTCTGCTAAGGTGCATTTaGCCTCTGGCCTCGGTTCCTCTTCACTTCAGCATGGGTTTTGCA +
Preference number: 1 (lower is better)
Translates to: YLSSLLSRSSLLRCI*PLASVPLHFSMGFA
Trigger: TGCAAAACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGAGGCCAAATGCACCTTAGCAGAGAGCTCCTGGAGAGAAGGCTAGAAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR TCA 90 bp GTGCAGCCTACACCACAAGCTAACTGTAGGATATTTTCATCACCCTaGAAAGGAACCCTACACCCATTAGCAGTTACTCCATTCCATCTA +
Preference number: 1 (lower is better)
Translates to: VQPTPQANCRIFSSP*KGTLHPLAVTPFHL
Trigger: TAGATGGAATGGAGTAACTGCTAATGGGTGTAGGGTTCCTTTTCAGGGTGATGAAAATATCCTACAGTTAGCTTGTGGTGTAGGCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR CCA 90 bp AGGCAACCACTAATCTTTCTGCCTATTCTGGACATTTCGTATGAATaGAATCATCATGTGATCTTTTGTGACCGGCTTCTTTCACTTAAC +
Preference number: 1 (lower is better)
Translates to: RQPLIFLPILDISYE*NHHVIFCDRLLSLN
Trigger: GTTAAGTGAAAGAAGCCGGTCACAAAAGATCACATGATGATTCCATTCATACGAAATGTCCAGAATAGGCAGAAAGATTAGTGGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR TCA 90 bp TCTTTCTGCCTATTCTGGACATTTCGTATGAATGGAATCATCATGTaGTCTTTTGTGACCGGCTTCTTTCACTTAACGTTTTCAAGGTTT +
Preference number: 1 (lower is better)
Translates to: SFCLFWTFRMNGIIM*SFVTGFFHLTFSRF
Trigger: AAACCTTGAAAACGTTAAGTGAAAGAAGCCGGTCACAAAAGATCACATGATGATTCCATTCATACGAAATGTCCAGAATAGGCAGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR GCA 90 bp ATTTACGTATACGGTTCAGTGGCATTAAGTACACTCACATTGTTGTaGAACCATCACCACCATCTATCTTTAGAACTTTGTTTCAGATTA +
Preference number: 1 (lower is better)
Translates to: IYVYGSVALSTLTLL*NHHHHLSLELCFRL
Trigger: TAATCTGAAACAAAGTTCTAAAGATAGATGGTGGTGATGGTTGCACAACAATGTGAGTGTACTTAATGCCACTGAACCGTATACGTAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR CCA 90 bp GCCCTTCTGCGAATAACCGCTCTGCTCTGTGTGGGGACGGGAGGGGTCCTTGTGACCGGGCCACAGTGGTaGGGAACACGGAGATCATCG +
Preference number: 2 (lower is better)
Translates to: ALLRITALLCVGTGGVLVTGPQW*GTRRSS
Trigger: CGATGATCTCCGTGTTCCCCACCACTGTGGCCCGGT...CACAAGGACCCCTCCCGTCCCCACACAGAGCAGAGCGGTTATTCGCAGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR CCA 90 bp CCTGAGGTCCAGCAGGGTGACAGGCTTCTAGCAAGCCATGCACAGCCCAGGCCTGATAGTCATAGCCCCTaGATGGCAGGAGAGAGCCTG +
Preference number: 2 (lower is better)
Translates to: PEVQQGDRLLASHAQPRPDSHSP*MAGESL
Trigger: CAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATC...AGGCCTGGGCTGTGCATGGCTTGCTAGAAGCCTGTCACCCTGCTGGACCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CAA 90 bp CATAGCCCCTGGATGGCAGGAGAGAGCCTGACCCTCATTTTGAGGTaGGCTCTGTGGCCGAGGGCTATTCTTGCTGTCGGCTTAAGGTCC +
Preference number: 2 (lower is better)
Translates to: HSPWMAGESLTLILR*ALWPRAILAVGLRS
Trigger: GGACCTTAAGCCGACAGCAAGAATAGCCCTCGGCCACAGAGCCAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCAGGGGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR GCA 90 bp GGCCAAGGGAACATCTGCTGGGCTAGCTCAAGTCCAGTGTACCAAGATGGAGAGTCCGAGTCCCCGTGGTaGCCAGGACAAGACCTAGGA +
Preference number: 2 (lower is better)
Translates to: GQGNICWASSSPVYQDGESESPW*PGQDLG
Trigger: TCCTAGGTCTTGTCCTGGGCACCACGGGGACTCGGA...CTCTCCATCTTGGTACACTGGACTTGAGCTAGCCCAGCAGATGTTCCCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
3UTR-3UTR GCA 90 bp CACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACGGACAGTGGTCCCCCTaGAAGCTGGAAACTCGGCAG +
Preference number: 2 (lower is better)
Translates to: HPSSLSRLDHRLSLIYLNGQWSP*KLETRQ
Trigger: CTGCCGAGTTTCCAGCTTGCAGGGGGACCACTGTCC...GTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR CCA 90 bp GATAGTCATAGCCCCTGGATGGCAGGAGAGAGCCTGACCCTCATTTTGAGGTTGTGCACCGGGCCACAGTaGTGGGGAACACGGAGATCA +
Preference number: 2 (lower is better)
Translates to: DSHSPWMAGESLTLILRLCTGPQ*WGTRRS
Trigger: TGATCTCCGTGTTCCCCACCACTGTGGCCCGGTGCA...CAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CAA 90 bp GATAGTCATAGCCCCTGGATGGCAGGAGAGAGCCTGACCCTCATTTaGAGGTTGGCTCTGTGGCCGAGGGCTATTCTTGCTGTCGGCTTA +
Preference number: 2 (lower is better)
Translates to: DSHSPWMAGESLTLI*RLALWPRAILAVGL
Trigger: TAAGCCGACAGCAAGAATAGCCCTCGGCCACAGAGCCAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR GCA 90 bp AATTTCTCTGCCAGCGTGCGTTGTCTACTAACAAGACCACAAAGCCCGCCTTGCTCCGAGTCCCCGTGGTaGCCAGGACAAGACCTAGGA +
Preference number: 2 (lower is better)
Translates to: NFSASVRCLLTRPQSPPCSESPW*PGQDLG
Trigger: TCCTAGGTCTTGTCCTGGGCACCACGGGGACTCGGA...GCAAGGCGGGCTTTGTGGTCTTGTTAGTAGACAACGCACGCTGGCAGAGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CAA 90 bp TGCCTGTGGTCCCAGCTAAATGAAAATCTGAAGCAGGTGGATCTCTaGAGCCCAGGAGCTCAAGGTTGCAGTGAGCCATGTTCGCGCCAC +
Preference number: 2 (lower is better)
Translates to: CLWSQLNENLKQVDL*SPGAQGCSEPCSRH
Trigger: GTGGCGCGAACATGGCTCACTGCAACCTTGAGCTCCTGGGCTCAAGAGATCCACCTGCTTCAGATTTTCATTTAGCTGGGACCACAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR CAA 90 bp GCATTTGGCCTCTGGCCTCGGTTCCTCTTCACTTCAGCATGGGTTTaGCAGAATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGTCC +
Preference number: 2 (lower is better)
Translates to: AFGLWPRFLFTSAWV*QNFLWESQLPVSES
Trigger: GGACTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGAGGCCAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR-3UTR TCA 90 bp CTGCTAAGGTGCATTTGGCCTCTGGCCTCGGTTCCTCTTCACTTCAGCATGGGTCCAGAGGTGCTTGCTTaGTGTGAACACCTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: LLRCIWPLASVPLHFSMGPEVLA*CEHLLS
Trigger: TGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGG...ACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGAGGCCAAATGCACCTTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR-3UTR GCA 90 bp CAAATTGATGTGACTTGGACACAGTTTGGCCAAGGGAACATCTGCTGGGCTAGCCTCACACGGGGCTGCTaGGTTGCACAACTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: QIDVTWTQFGQGNICWASLTRGC*VAQLQE
Trigger: CTCCTGGAGTTGTGCAACGCAGCAGCCCCGTGTGAG...GCTAGCCCAGCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCACATCAATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
3UTR-3UTR TCA 90 bp CACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACTGTCCAAGTGTCAAGTaGGTAGTGCAAGCAGGGGGT +
Preference number: 2 (lower is better)
Translates to: HPSSLSRLDHRLSLIYLNCPSVK*VVQAGG
Trigger: ACCCCCTGCTTGCACTACTCACTTGACACTTGGACA...GTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR GCA 90 bp AATTTCTCTGCCAGCGTGCGTTGTCTACTAACAAGACCACAAAGCCCGCCTTGCTGCAGGGGAGCTGACTaGTGTTCCTGCCTTTGTGTC +
Preference number: 2 (lower is better)
Translates to: NFSASVRCLLTRPQSPPCCRGAD*CSCLCV
Trigger: GACACAAAGGCAGGAACAGCAGTCAGCTCCCCTGCA...GCAAGGCGGGCTTTGTGGTCTTGTTAGTAGACAACGCACGCTGGCAGAGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR TCA 90 bp AATTTCTCTGCCAGCGTGCGTTGTCTACTAACAAGACCACAAAGCCCGCCTTGCCCAGAGGTGCTTGCTTaGTGTGAACACCTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: NFSASVRCLLTRPQSPPCPEVLA*CEHLLS
Trigger: TGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGG...GCAAGGCGGGCTTTGTGGTCTTGTTAGTAGACAACGCACGCTGGCAGAGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR TCA 90 bp ATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACTTAGCCCTGGAGTCCTCAGATaGAATAGGGCAAACCCCTGC +
Preference number: 2 (lower is better)
Translates to: ILPFKAGPQAQLDLPQLSPGVLR*NRANPC
Trigger: GCAGGGGTTTGCCCTATTTCATCTGAGGACTCCAGG...GCTAAGTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR GCA 90 bp GGCCAAGGGAACATCTGCTGGGCTAGCTCAAGTCCAGTGTACCAAGATGGAGAGCTTGATGTGAACACCTaGTCTCACCCTCTAAGCTGT +
Preference number: 2 (lower is better)
Translates to: GQGNICWASSSPVYQDGELDVNT*SHPLSC
Trigger: ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAG...CTCTCCATCTTGGTACACTGGACTTGAGCTAGCCCAGCAGATGTTCCCTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
3UTR CAA 90 bp GTTTCATCCTTCACTCAACTGCAATTAGGAAGAGTCAAGTTCCCTTaGGCGCCTAAAGGAGAACAACGGCCGGCAATCCCAGGAATCCGA +
Preference number: 2 (lower is better)
Translates to: VSSFTQLQLGRVKFP*APKGEQRPAIPGIR
Trigger: TCGGATTCCTGGGATTGCCGGCCGTTGTTCTCCTTTAGGCGCCAAAGGGAACTTGACTCTTCCTAATTGCAGTTGAGTGAAGGATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR GCA 90 bp AATTTCTCTGCCAGCGTGCGTTGTCTACTAACAAGACCACAAAGCCCGCCTTGCCTTGATGTGAACACCTaGTCTCACCCTCTAAGCTGT +
Preference number: 2 (lower is better)
Translates to: NFSASVRCLLTRPQSPPCLDVNT*SHPLSC
Trigger: ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAG...GCAAGGCGGGCTTTGTGGTCTTGTTAGTAGACAACGCACGCTGGCAGAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR GCA 90 bp CAAATTGATGTGACTTGGACACAGTTTGGCCAAGGGAACATCTGCTGGGCTAGCATTCTCTCACACAGATaGTGCGCACACCAGTGGTTG +
Preference number: 2 (lower is better)
Translates to: QIDVTWTQFGQGNICWASILSHR*CAHQWL
Trigger: CAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAAT...GCTAGCCCAGCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCACATCAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
3UTR-3UTR GCA 90 bp CTCTGGCCTCGGTTCCTCTTCACTTCAGCATGGGTTTTGCAGAATTTTCTCTGGCTTGATGTGAACACCTaGTCTCACCCTCTAAGCTGT +
Preference number: 2 (lower is better)
Translates to: LWPRFLFTSAWVLQNFLWLDVNT*SHPLSC
Trigger: ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAG...CCAGAGAAAATTCTGCAAAACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR-3UTR GCA 90 bp CAACTGCAATTAGGAAGAGTCAAGTTCCCTTTGGCGCCTAAAGGAGAACAACGGGCTGACTGCTGTTCCTaGCTTTGTGTCACTTTGCAG +
Preference number: 2 (lower is better)
Translates to: QLQLGRVKFPLAPKGEQRADCCS*LCVTLQ
Trigger: CTGCAAAGTGACACAAAGGCAGGAACAGCAGTCAGC...CCGTTGTTCTCCTTTAGGCGCCAAAGGGAACTTGACTCTTCCTAATTGCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR GCA 90 bp ATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACTTAGCGTTACAGTCTTGACCTaGTTACCTCTGGGAGTGTTT +
Preference number: 2 (lower is better)
Translates to: ILPFKAGPQAQLDLPQLSVTVLT*LPLGVF
Trigger: AAACACTCCCAGAGGTAAGCAGGTCAAGACTGTAAC...GCTAAGTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR GCA 90 bp TACGTATACGGTTCAGTGGCATTAAGTACACTCACATTGTTGTGCAACCATCACTGCATAGCACACACCTaGCCTCACACCCACTCTTCA +
Preference number: 2 (lower is better)
Translates to: YVYGSVALSTLTLLCNHHCIAHT*PHTHSS
Trigger: TGAAGAGTGGGTGTGAGGGCAGGTGTGTGCTATGCA...GTGATGGTTGCACAACAATGTGAGTGTACTTAATGCCACTGAACCGTATACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR TCA 90 bp TACGTATACGGTTCAGTGGCATTAAGTACACTCACATTGTTGTGCAACCATCACACTAGTACAGGTCAATaGACAAATGACCCGCCTGTC +
Preference number: 2 (lower is better)
Translates to: YVYGSVALSTLTLLCNHHTSTGQ*TNDPPV
Trigger: GACAGGCGGGTCATTTGTTCATTGACCTGTACTAGT...GTGATGGTTGCACAACAATGTGAGTGTACTTAATGCCACTGAACCGTATACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR CCA 90 bp TTGTTTGTTACAGATCTGGGGAGTTTAGTAAGTAGAATCAGTATTTCGTTAAGGAATCCAAGAAGGCAATaGAGGGACCCTGGGATCATC +
Preference number: 2 (lower is better)
Translates to: LFVTDLGSLVSRISISLRNPRRQ*RDPGII
Trigger: GATGATCCCAGGGTCCCTCCATTGCCTTCTTGGATT...CCTTAACGAAATACTGATTCTACTTACTAAACTCCCCAGATCTGTAACAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CAA 90 bp CATATTTACGTATACGGTTCAGTGGCATTAAGTACACTCACATTGTaGTGCAACCATCACCACCATCTATCTTTAGAACTTTGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: HIYVYGSVALSTLTL*CNHHHHLSLELCFR
Trigger: TCTGAAACAAAGTTCTAAAGATAGATGGTGGTGATGGTTGCACAACAATGTGAGTGTACTTAATGCCACTGAACCGTATACGTAAATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CAA 90 bp GAACATATTTACGTATACGGTTCAGTGGCATTAAGTACACTCACATaGTTGTGCAACCATCACCACCATCTATCTTTAGAACTTTGTTTC +
Preference number: 2 (lower is better)
Translates to: EHIYVYGSVALSTLT*LCNHHHHLSLELCF
Trigger: GAAACAAAGTTCTAAAGATAGATGGTGGTGATGGTTGCACAACAATGTGAGTGTACTTAATGCCACTGAACCGTATACGTAAATATGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR TCA 90 bp TTGTTTGTTACAGATCTGGGGAGTTTAGTAAGTAGAATCAGTATTTCGTTAAGGTGCAGCATAAATCAGTaGGGATGTTGTCATGAACTC +
Preference number: 2 (lower is better)
Translates to: LFVTDLGSLVSRISISLRCSINQ*GCCHEL
Trigger: GAGTTCATGACAACATCCTCACTGATTTATGCTGCA...CCTTAACGAAATACTGATTCTACTTACTAAACTCCCCAGATCTGTAACAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CCA 72 bp TGCAGGGGGACCAGACCGCCTTGCACCGGGCCACAGTaGTGGGGAACACGGAGATCATCGCGGCGCTCATCC +
Preference number: 3 (lower is better)
Translates to: CRGTRPPCTGPQ*WGTRRSSRRSS
Trigger: GGATGAGCGCCGCGATGATCTCCGTGTTCCCCACCACTGTGGCCCGGTGCAAGGCGGTCTGGTCCCCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 72 bp CACGGAGATCATCGCGGCGCTCATCCACGAAGGGTGTaGCCTGTCTCCGAGTCCCCGTGGTGCCCAGGACAA +
Preference number: 3 (lower is better)
Translates to: HGDHRGAHPRRV*PVSESPWCPGQ
Trigger: TTGTCCTGGGCACCACGGGGACTCGGAGACAGGGCACACCCTTCGTGGATGAGCGCCGCGATGATCTCCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 72 bp GGGGAGCTGACTGCTGTTCCTGCCTTTGTGTCACTTTaGAGGGGGACCAGACCGCCTTGCACCGGGCCACAG +
Preference number: 3 (lower is better)
Translates to: GELTAVPAFVSL*RGTRPPCTGPQ
Trigger: CTGTGGCCCGGTGCAAGGCGGTCTGGTCCCCCTGCAAAGTGACACAAAGGCAGGAACAGCAGTCAGCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR TCA 72 bp CCTCTGCCTCCCGGGTTCAATATGAGGCAGCCCTCCTaGGTAGCTGGAATTACAGGCACGTGCCACCAGGTT +
Preference number: 3 (lower is better)
Translates to: PLPPGFNMRQPS*VAGITGTCHQV
Trigger: AACCTGGTGGCACGTGCCTGTAATTCCAGCTACTCAGGAGGGCTGCCTCATATTGAACCCGGGAGGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR GCA 72 bp GTGCTGCTAACTGGCAGAGCTGGACAGTGGTCCCCCTaGAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCA +
Preference number: 3 (lower is better)
Translates to: VLLTGRAGQWSP*KLETRQAVEIP
Trigger: TGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGACCACTGTCCAGCTCTGCCAGTTAGCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 72 bp CAGCCCAGGCCTCCTGACCCCTTGTCTCGTGCTCATTaGTTTCCACCAGAACATTTCCACACTGCCCACCCA +
Preference number: 3 (lower is better)
Translates to: QPRPPDPLSRAH*FPPEHFHTAHP
Trigger: TGGGTGGGCAGTGTGGAAATGTTCTGGTGGAAAGCAATGAGCACGAGACAAGGGGTCAGGAGGCCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR CAA 90 bp GAGGACCTGTCAGAGATAAAGGGTGCTCTTAGAGACTTCAGAACTCTCCTGTTAGGGGACCAGACCGCCTaGCACCGGGCCACAGTGGTG +
Preference number: 3 (lower is better)
Translates to: EDLSEIKGALRDFRTLLLGDQTA*HRATVV
Trigger: CACCACTGTGGCCCGGTGCAAGGCGGTCTGGTCCCC...TAACAGGAGAGTTCTGAAGTCTCTAAGAGCACCCTTTATCTCTGACAGGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR CAA 90 bp TGCCCACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTAGCCTGACCCTCATTTaGAGGTTGGCTCTGTGGCCG +
Preference number: 3 (lower is better)
Translates to: CPPILPFKAGPQAQLDLPSLTLI*RLALWP
Trigger: CGGCCACAGAGCCAACCTCAAAATGAGGGTCAGGCT...AGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR CAA 90 bp ACTCTTCACACCTGTGATAGTCATAGCCCCTGGATGGCAGGAGAGAGCCTGACCCTCTGCCAGCGTGCGTaGTCTACTAACAAGACCACA +
Preference number: 3 (lower is better)
Translates to: TLHTCDSHSPWMAGESLTLCQRA*STNKTT
Trigger: TGTGGTCTTGTTAGTAGACAACGCACGCTGGCAGAG...GGTCAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATCACAGGTGTGAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 72 bp TCGTGCTCATTGCTTTCCACCAGAACATTTCCACACTaGCCACCCATCCTCCCTTTCAAGGCTGGACCACAG +
Preference number: 3 (lower is better)
Translates to: SCSLLSTRTFPH*PPILPFKAGPQ
Trigger: CTGTGGTCCAGCCTTGAAAGGGAGGATGGGTGGGCAGTGTGGAAATGTTCTGGTGGAAAGCAATGAGCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 72 bp CTTTCTAGCCTTCTCTCCAGGAGCTCTCTGCTAAGGTaGATTTGGCCTCTGGCCTCGGTTCCTCTTCACTTC +
Preference number: 3 (lower is better)
Translates to: LSSLLSRSSLLR*IWPLASVPLHF
Trigger: GAAGTGAAGAGGAACCGAGGCCAGAGGCCAAATGCACCTTAGCAGAGAGCTCCTGGAGAGAAGGCTAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR GCA 72 bp GGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTaGTTTAATTGCATAGCACACACCTGCCCTCACACC +
Preference number: 3 (lower is better)
Translates to: GNSAGSRDSRHC*FNCIAHTCPHT
Trigger: GGTGTGAGGGCAGGTGTGTGCTATGCAATTAAAGCAGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CCA 72 bp GTGACTTGGACACAGTTTGGCCAAGGGAACATCTGCTaGGCTAGCTCAAGTCCAGTGTACCAAGATGGAGAG +
Preference number: 3 (lower is better)
Translates to: VTWTQFGQGNIC*ASSSPVYQDGE
Trigger: CTCTCCATCTTGGTACACTGGACTTGAGCTAGCCCAGCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
3UTR GCA 72 bp GCAGGCAGTAGAGATTCCAGGCATTGCTGCTTTAATTaGATAGCACACACCTGCCCTCACACCCACTCTTCA +
Preference number: 3 (lower is better)
Translates to: AGSRDSRHCCFN*IAHTCPHTHSS
Trigger: TGAAGAGTGGGTGTGAGGGCAGGTGTGTGCTATGCAATTAAAGCAGCAATGCCTGGAATCTCTACTGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR GCA 72 bp GATGTGACTTGGACACAGTTTGGCCAAGGGAACATCTaGTGGGCTAGCTCAAGTCCAGTGTACCAAGATGGA +
Preference number: 3 (lower is better)
Translates to: DVTWTQFGQGNI*WASSSPVYQDG
Trigger: TCCATCTTGGTACACTGGACTTGAGCTAGCCCAGCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
3UTR GCA 72 bp TCTGGCCTCGGTTCCTCTTCACTTCAGCATGGGTTTTaGAGAATTTTCTCTGGGAATCCCAGCTGCCTGTCT +
Preference number: 3 (lower is better)
Translates to: SGLGSSSLQHGF*RIFSGNPSCLS
Trigger: AGACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR CCA 72 bp TTTGGCCTCTGGCCTCGGTTCCTCTTCACTTCAGCATaGGTTTTGCAGAATTTTCTCTGGGAATCCCAGCTG +
Preference number: 3 (lower is better)
Translates to: FGLWPRFLFTSA*VLQNFLWESQL
Trigger: CAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGAGGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR GCA 72 bp CATTTTGAGGTTGGCTCTGTGGCCGAGGGCTATTCTTaGTGTCGGCTTAAGGTCCCCCTCTTAGTTTATGAA +
Preference number: 3 (lower is better)
Translates to: HFEVGSVAEGYS*CRLKVPLLVYE
Trigger: TTCATAAACTAAGAGGGGGACCTTAAGCCGACAGCAAGAATAGCCCTCGGCCACAGAGCCAACCTCAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR TCA 72 bp GCTCTTAGAGACTTCAGAACTCTCCTGTTACAGTCTTaGCCTGCTTACCTCTGGGAGTGTTTCATCCTTCAC +
Preference number: 3 (lower is better)
Translates to: ALRDFRTLLLQS*PAYLWECFILH
Trigger: GTGAAGGATGAAACACTCCCAGAGGTAAGCAGGTCAAGACTGTAACAGGAGAGTTCTGAAGTCTCTAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR-3UTR CAA 90 bp TTGTTTGTTACAGATCTGGGGAGTTTAGTAAGTAGAATCAGTATTTCGTTAAGGTGCCTTTGTGTCACTTaGCAGGGGGACCAGACCGCC +
Preference number: 3 (lower is better)
Translates to: LFVTDLGSLVSRISISLRCLCVT*QGDQTA
Trigger: GGCGGTCTGGTCCCCCTGCAAAGTGACACAAAGGCA...CCTTAACGAAATACTGATTCTACTTACTAAACTCCCCAGATCTGTAACAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CCA 72 bp ATGCAGGATTTTTCGAGAAAGTTCCAGGGTATCTCCTaGTGTCAGTATACTTTCAGTCCTACACCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: MQDFSRKFQGIS*CQYTFSPTPQE
Trigger: CTCTTGAGGTGTAGGACTGAAAGTATACTGACACCAGGAGATACCCTGGAACTTTCTCGAAAAATCCTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR TCA 72 bp AGAAGTGCTAACTCATACAGCAGCTGTTTCATCTTTTaGGGAACTGACCGTCTGTTTTCTGAAGTGGCTACA +
Preference number: 3 (lower is better)
Translates to: RSANSYSSCFIF*GTDRLFSEVAT
Trigger: TGTAGCCACTTCAGAAAACAGACGGTCAGTTCCTCAAAAGATGAAACAGCTGCTGTATGAGTTAGCACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR TCA 72 bp ACACCACAAGCTAACTGTAGGATATTTTCATCACCCTaGAAAGGAACCCTACACCCATTAGCAGTTACTCCA +
Preference number: 3 (lower is better)
Translates to: TPQANCRIFSSP*KGTLHPLAVTP
Trigger: TGGAGTAACTGCTAATGGGTGTAGGGTTCCTTTTCAGGGTGATGAAAATATCCTACAGTTAGCTTGTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR TCA 72 bp GTGGCTACACCATTTTACATTCCCACCAGCAATGTATaGGGGTTCTGTAATTTCTGTACATCTTCACCAAGA +
Preference number: 3 (lower is better)
Translates to: VATPFYIPTSNV*GFCNFCTSSPR
Trigger: TCTTGGTGAAGATGTACAGAAATTACAGAACCCTCATACATTGCTGGTGGGAATGTAAAATGGTGTAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR-3UTR CAA 90 bp TTGTTTGTTACAGATCTGGGGAGTTTAGTAAGTAGAATCAGTATTTCGTTAAGGGACCACAGGCTCAGCTaGATTTACCTCAACTTAGCT +
Preference number: 3 (lower is better)
Translates to: LFVTDLGSLVSRISISLRDHRLS*IYLNLA
Trigger: AGCTAAGTTGAGGTAAATCAAGCTGAGCCTGTGGTC...CCTTAACGAAATACTGATTCTACTTACTAAACTCCCCAGATCTGTAACAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR TCA 72 bp CTATTCTGGACATTTCGTATGAATGGAATCATCATGTaGTCTTTTGTGACCGGCTTCTTTCACTTAACGTTT +
Preference number: 3 (lower is better)
Translates to: LFWTFRMNGIIM*SFVTGFFHLTF
Trigger: AAACGTTAAGTGAAAGAAGCCGGTCACAAAAGATCACATGATGATTCCATTCATACGAAATGTCCAGAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR GCA 72 bp GTACAGTTCAGTGGATTTGAATATATTCAAGAGTTGTaGAGCCTACACCACAAGCTAACTGTAGGATATTTT +
Preference number: 3 (lower is better)
Translates to: VQFSGFEYIQEL*SLHHKLTVGYF
Trigger: AAAATATCCTACAGTTAGCTTGTGGTGTAGGCTGCACAACTCTTGAATATATTCAAATCCACTGAACTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR TCA 90 bp CCTGAGGTCCAGCAGGGTGACAGGCTTCTAGCAAGCCATGCACAGCCCAGGCCTGGGGTGCAGGGGAGCTaGCTGCTGTTCCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PEVQQGDRLLASHAQPRPGVQGS*LLFLPL
Trigger: CAAAGGCAGGAACAGCAGTCAGCTCCCCTGCACCCC...AGGCCTGGGCTGTGCATGGCTTGCTAGAAGCCTGTCACCCTGCTGGACCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp CTTGCACCGGGCCACAGTGGTGGGGAACACGGAGATCATCGCGGCGCTCATCCAGCCGAGGGCTATTCTTaGTGTCGGCTTAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LAPGHSGGEHGDHRGAHPAEGYS*CRLKVP
Trigger: GGGGACCTTAAGCCGACAGCAAGAATAGCCCTCGGC...TGGATGAGCGCCGCGATGATCTCCGTGTTCCCCACCACTGTGGCCCGGTGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp GCCCTTCTGCGAATAACCGCTCTGCTCTGTGTGGGGACGGGAGGGGTCCTTGTGCTTGCGCTTCAGTCGTaGGCGAAGCCTCTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: ALLRITALLCVGTGGVLVLALQS*AKPLRW
Trigger: CCACCGAAGAGGCTTCGCCCACGACTGAAGCGCAAG...CACAAGGACCCCTCCCGTCCCCACACAGAGCAGAGCGGTTATTCGCAGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CAA 72 bp TGCCTTTGTGTCACTTTGCAGGGGGACCAGACCGCCTaGCACCGGGCCACAGTGGTGGGGAACACGGAGATC +
Preference number: 4 (lower is better)
Translates to: CLCVTLQGDQTA*HRATVVGNTEI
Trigger: GATCTCCGTGTTCCCCACCACTGTGGCCCGGTGCAAGGCGGTCTGGTCCCCCTGCAAAGTGACACAAAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTGCGGACAGTGGTCCCCCTaGAAGCTGGAAACTCGGCAG +
Preference number: 4 (lower is better)
Translates to: VPLQAGNSAGSRDSRHCCGQWSP*KLETRQ
Trigger: CTGCCGAGTTTCCAGCTTGCAGGGGGACCACTGTCC...GCAGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR TCA 90 bp CCTGAGGTCCAGCAGGGTGACAGGCTTCTAGCAAGCCATGCACAGCCCAGGCCTCCAGAGGTGCTTGCTTaGTGTGAACACCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PEVQQGDRLLASHAQPRPPEVLA*CEHLLS
Trigger: TGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGG...AGGCCTGGGCTGTGCATGGCTTGCTAGAAGCCTGTCACCCTGCTGGACCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR TCA 90 bp TTTGTGTCACTTTGCAGGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGTGGTGTCCAAGTGTCAAGTaGGTAGTGCAAGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FVSLCRGTRPPCTGPQWWCPSVK*VVQAGG
Trigger: ACCCCCTGCTTGCACTACTCACTTGACACTTGGACA...CCACCACTGTGGCCCGGTGCAAGGCGGTCTGGTCCCCCTGCAAAGTGACACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp TGGTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTAGTGCAAGCAGGGGGTaGAGGGGAGCTGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: WSPCKLETRQAVEIPGIASASRG*RGADCC
Trigger: ACAGCAGTCAGCTCCCCTGCACCCCCTGCTTGCACT...AGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp CTGGGAATCCCAGCTGCCTGTCTCCGAGTCCCCGTGGTGCCCAGGACAAGACCTCCAGGCAATCACAAATaGGAGAGAGTGCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: LGIPAACLRVPVVPRTRPPGNHK*ERVQTL
Trigger: CAGAGTCTGCACTCTCTCCCATTTGTGATTGCCTGG...AGGTCTTGTCCTGGGCACCACGGGGACTCGGAGACAGGCAGCTGGGATTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR TCA 90 bp GGCCACAGTGGTGGGGAACACGGAGATCATCGCGGCGCTCATCCACGAAGGGTGACTAGTACAGGTCAATaGACAAATGACCCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GHSGGEHGDHRGAHPRRVTSTGQ*TNDPPV
Trigger: GACAGGCGGGTCATTTGTTCATTGACCTGTACTAGT...CACCCTTCGTGGATGAGCGCCGCGATGATCTCCGTGTTCCCCACCACTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp TCCAGGAGCTCTCTGCTAAGGTGCATTTGGCCTCTGGCCTCGGTTCCTCTTCACGCCTCCTTCAGGTCTTaGGCTTCAGTCGTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: SRSSLLRCIWPLASVPLHASFRS*ASVVGE
Trigger: TTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGC...GTGAAGAGGAACCGAGGCCAGAGGCCAAATGCACCTTAGCAGAGAGCTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR GCA 90 bp GCCCTTCTGCGAATAACCGCTCTGCTCTGTGTGGGGACGGGAGGGGTCCTTGTGTGTAACAATGCCGTTTaGCTCCTTCAGGTCTTGCGC +
Preference number: 4 (lower is better)
Translates to: ALLRITALLCVGTGGVLVCNNAV*LLQVLR
Trigger: GCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACA...CACAAGGACCCCTCCCGTCCCCACACAGAGCAGAGCGGTTATTCGCAGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp CCTGAGGTCCAGCAGGGTGACAGGCTTCTAGCAAGCCATGCACAGCCCAGGCCTATTCTCTCACACAGATaGTGCGCACACCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PEVQQGDRLLASHAQPRPILSHR*CAHQWL
Trigger: CAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAAT...AGGCCTGGGCTGTGCATGGCTTGCTAGAAGCCTGTCACCCTGCTGGACCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp AATTTCTCTGCCAGCGTGCGTTGTCTACTAACAAGACCACAAAGCCCGCCTTGCCCGCTCTGCTCTGTGTaGGGACGGGAGGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NFSASVRCLLTRPQSPPCPLCSV*GREGSL
Trigger: CAAGGACCCCTCCCGTCCCCACACAGAGCAGAGCGG...GCAAGGCGGGCTTTGTGGTCTTGTTAGTAGACAACGCACGCTGGCAGAGAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp AATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGTCCCCGTGGTGCCCAGGACTGCTAAGGTGCATTTaGCCTCTGGCCTCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NFLWESQLPVSESPWCPGLLRCI*PLASVP
Trigger: AGGAACCGAGGCCAGAGGCCAAATGCACCTTAGCAG...TCCTGGGCACCACGGGGACTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR CAA 72 bp TGGATGGCAGGAGAGAGCCTGACCCTCATTTTGAGGTaGGCTCTGTGGCCGAGGGCTATTCTTGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: WMAGESLTLILR*ALWPRAILAVG
Trigger: GCCGACAGCAAGAATAGCCCTCGGCCACAGAGCCAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CAA 72 bp AGCCCCTGGATGGCAGGAGAGAGCCTGACCCTCATTTaGAGGTTGGCTCTGTGGCCGAGGGCTATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SPWMAGESLTLI*RLALWPRAILA
Trigger: AGCAAGAATAGCCCTCGGCCACAGAGCCAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR TCA 90 bp CTGCCTTTGTGTCACTTTGCAGGGGGACCAGACCGCCTTGCACCGGGCCACAGTCCTGTCATCAAATCATaGGTGCTGCTAACTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPLCHFAGGPDRLAPGHSPVIKS*VLLTGR
Trigger: TCTGCCAGTTAGCAGCACTCATGATTTGATGACAGG...ACTGTGGCCCGGTGCAAGGCGGTCTGGTCCCCCTGCAAAGTGACACAAAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp TGCCCACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTGCCTCCTTCAGGTCTTaGGCTTCAGTCGTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: CPPILPFKAGPQAQLDLPASFRS*ASVVGE
Trigger: TTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGC...AGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp CACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACTCCGAGTCCCCGTGGTaGCCAGGACAAGACCTAGGA +
Preference number: 4 (lower is better)
Translates to: HPSSLSRLDHRLSLIYLNSESPW*PGQDLG
Trigger: TCCTAGGTCTTGTCCTGGGCACCACGGGGACTCGGA...GTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp CAACTGCAATTAGGAAGAGTCAAGTTCCCTTTGGCGCCTAAAGGAGAACAACGGGGGACCAGACCGCCTTaGACCGGGCCACAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QLQLGRVKFPLAPKGEQRGTRPP*TGPQWW
Trigger: CCACCACTGTGGCCCGGTGCAAGGCGGTCTGGTCCC...CCGTTGTTCTCCTTTAGGCGCCAAAGGGAACTTGACTCTTCCTAATTGCAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp CACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACGGCAGAGCTGGACAGTaGTCCCCCTGCAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HPSSLSRLDHRLSLIYLNGRAGQ*SPCKLE
Trigger: TTCCAGCTTGCAGGGGGACCACTGTCCAGCTCTGCC...GTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp CTGCCTTTGTGTCACTTTGCAGGGGGACCAGACCGCCTTGCACCGGGCCACAGTGAGTCAAGTTCCCTTTaGCGCCTAAAGGAGAACAAC +
Preference number: 4 (lower is better)
Translates to: LPLCHFAGGPDRLAPGHSESSSL*RLKENN
Trigger: GTTGTTCTCCTTTAGGCGCCAAAGGGAACTTGACTC...ACTGTGGCCCGGTGCAAGGCGGTCTGGTCCCCCTGCAAAGTGACACAAAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp CAGAATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGTCCCCGTGGTGCCCAATTCTCTCACACAGATaGTGCGCACACCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QNFLWESQLPVSESPWCPILSHR*CAHQWL
Trigger: CAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAAT...TGGGCACCACGGGGACTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR GCA 90 bp GTGGTCCAGAGGTGCTTGCTTGATGTGAACACCTGCTCTCACCCTCTAAGCTGTGCCTTTGTGTCACTTTaGAGGGGGACCAGACCGCCT +
Preference number: 4 (lower is better)
Translates to: VVQRCLLDVNTCSHPLSCAFVSL*RGTRPP
Trigger: AGGCGGTCTGGTCCCCCTGCAAAGTGACACAAAGGC...ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp CCTGAGGTCCAGCAGGGTGACAGGCTTCTAGCAAGCCATGCACAGCCCAGGCCTCATTGCTGCTTTAATTaGATAGCACACACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PEVQQGDRLLASHAQPRPHCCFN*IAHTCP
Trigger: AGGGCAGGTGTGTGCTATGCAATTAAAGCAGCAATG...AGGCCTGGGCTGTGCATGGCTTGCTAGAAGCCTGTCACCCTGCTGGACCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GTGGTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCATATGCAGTGATAGCTaGAGTCCCTGGAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VVPLQAGNSAGSRDSRHCICSDS*SPWSPQ
Trigger: CTGAGGACTCCAGGGACTGCAGCTATCACTGCATAT...GCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GCCCTTCTGCGAATAACCGCTCTGCTCTGTGTGGGGACGGGAGGGGTCCTTGTGGGCTTCTTAGAAATATaGAGTGATAGCTGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ALLRITALLCVGTGGVLVGFLEI*SDSCSP
Trigger: GGGACTGCAGCTATCACTGCATATTTCTAAGAAGCC...CACAAGGACCCCTCCCGTCCCCACACAGAGCAGAGCGGTTATTCGCAGAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GGCCACAGTGGTGGGGAACACGGAGATCATCGCGGCGCTCATCCACGAAGGGTGACACTCACATTGTTGTaGAACCATCACCACCATCTA +
Preference number: 4 (lower is better)
Translates to: GHSGGEHGDHRGAHPRRVTLTLL*NHHHHL
Trigger: TAGATGGTGGTGATGGTTGCACAACAATGTGAGTGT...CACCCTTCGTGGATGAGCGCCGCGATGATCTCCGTGTTCCCCACCACTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp CAGCATGGGTTTTGCAGAATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGTTCTGGGAATCCCAGCTaGCTGTCTCCGAGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: QHGFCRIFSGNPSCLSPSSGNPS*LSPSPR
Trigger: ACGGGGACTCGGAGACAGGCAGCTGGGATTCCCAGA...ACTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR GCA 90 bp CTCTGTGCATGTAGTTGGCAGTCCCGGCCCAGCATCAGTGTCTGTAGTTATTATACGGGGCTGCTGCGTTaGACAACTCCAGGAGACGCC +
Preference number: 4 (lower is better)
Translates to: LCACSWQSRPSISVCSYYTGLLR*TTPGDA
Trigger: GGCGTCTCCTGGAGTTGTGCAACGCAGCAGCCCCGT...ATAATAACTACAGACACTGATGCTGGGCCGGGACTGCCAACTACATGCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR CCA 90 bp CAGCATGGGTTTTGCAGAATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGTCTTGCGCTTCAGTCGTaGGCGAAGCCTCTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: QHGFCRIFSGNPSCLSPSLALQS*AKPLRW
Trigger: CCACCGAAGAGGCTTCGCCCACGACTGAAGCGCAAG...ACTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR TCA 90 bp CTCTGTGTGGGGACGGGAGGGGTCCTTGTGTCCAAGTGTCAAGTGAGTAGTGCACCCCTGCATTGCCGTTaGCTAGTACAGGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: LCVGTGGVLVSKCQVSSAPLHCR*LVQVNE
Trigger: TTCATTGACCTGTACTAGTCAACGGCAATGCAGGGG...TGCACTACTCACTTGACACTTGGACACAAGGACCCCTCCCGTCCCCACACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR TCA 90 bp TGGAGCACAGTCTCTGTGCATGTAGTTGGCAGTCCCGGCCCAGCATCAGTGTCTTCGTGGGCGAAGCCATaGTTTTGTTCTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: WSTVSVHVVGSPGPASVSSWAKP*FCSHLF
Trigger: GAAGAGGTGAGAACAAAATCATGGCTTCGCCCACGA...AGACACTGATGCTGGGCCGGGACTGCCAACTACATGCACAGAGACTGTGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR GCA 90 bp GTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTGCCTTGATGTGAACACCTaGTCTCACCCTCTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VPLQAGNSAGSRDSRHCCLDVNT*SHPLSC
Trigger: ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAG...GCAGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GATAGTCATAGCCCCTGGATGGCAGGAGAGAGCCTGACCCTCATTTTGAGGTTGTGCAGGGGAGCTGACTaGTGTTCCTGCCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: DSHSPWMAGESLTLILRLCRGAD*CSCLCV
Trigger: GACACAAAGGCAGGAACAGCAGTCAGCTCCCCTGCA...CAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GTGGTCCAGAGGTGCTTGCTTGATGTGAACACCTGCTCTCACCCTCTAAGCTGTAGCTCTCTGCTAAGGTaGATTTGGCCTCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VVQRCLLDVNTCSHPLSCSSLLR*IWPLAS
Trigger: CGAGGCCAGAGGCCAAATGCACCTTAGCAGAGAGCT...ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR GCA 90 bp CTCTGTGCATGTAGTTGGCAGTCCCGGCCCAGCATCAGTGTCTGTAGTTATTATTGGAGAGTGAGACTGTaGCTCACACGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCACSWQSRPSISVCSYYWRVRL*LTRGCC
Trigger: GCAGCAGCCCCGTGTGAGGCACAGTCTCACTCTCCA...ATAATAACTACAGACACTGATGCTGGGCCGGGACTGCCAACTACATGCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR GCA 90 bp TCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGCCGTTTGCCTCCGGCCAAGGGAACATCTaGTGGGCTAGCTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SLTQMLRTPVVVTMPFASGQGNI*WASSSP
Trigger: TGGACTTGAGCTAGCCCAGCAGATGTTCCCTTGGCC...GGAGGCAAACGGCATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR CCA 90 bp ATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACTTAGCACCGGGCCACAGTGGTaGGGAACACGGAGATCATCG +
Preference number: 4 (lower is better)
Translates to: ILPFKAGPQAQLDLPQLSTGPQW*GTRRSS
Trigger: CGATGATCTCCGTGTTCCCCACCACTGTGGCCCGGT...GCTAAGTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp ATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACTTAGCTGCACCGGGCCACAGTaGTGGGGAACACGGAGATCA +
Preference number: 4 (lower is better)
Translates to: ILPFKAGPQAQLDLPQLSCTGPQ*WGTRRS
Trigger: TGATCTCCGTGTTCCCCACCACTGTGGCCCGGTGCA...GCTAAGTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp AAGGGAACATCTGCTGGGCTAGCTCAAGTCCAGTGTACCAAGATGGAGAGTGAGCTCTGTGCATGTAGTTaGCAGTCCCGGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: KGTSAGLAQVQCTKMESELCACS*QSRPSI
Trigger: GATGCTGGGCCGGGACTGCCAACTACATGCACAGAG...CTCACTCTCCATCTTGGTACACTGGACTTGAGCTAGCCCAGCAGATGTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR GCA 90 bp CGGTTCCTCTTCACTTCAGCATGGGTTTTGCAGAATTTTCTCTGGGAATCCCAGTCCGAGTCCCCGTGGTaGCCAGGACAAGACCTAGGA +
Preference number: 4 (lower is better)
Translates to: RFLFTSAWVLQNFLWESQSESPW*PGQDLG
Trigger: TCCTAGGTCTTGTCCTGGGCACCACGGGGACTCGGA...CTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTGAAGTGAAGAGGAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR GCA 90 bp CACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACTGCATAGCACACACCTaGCCTCACACCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: HPSSLSRLDHRLSLIYLNCIAHT*PHTHSS
Trigger: TGAAGAGTGGGTGTGAGGGCAGGTGTGTGCTATGCA...GTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp TCCAAGGAGAATTCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGCTCACACGGGGCTGCTaGGTTGCACAACTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SKENSLTQMLRTPVVVTMLTRGC*VAQLQE
Trigger: CTCCTGGAGTTGTGCAACGCAGCAGCCCCGTGTGAG...CATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAATTCTCCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR CCA 90 bp TCAGCATGGGTTTTGCAGAATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGGGTGCATTTGGCCTCTaGCCTCGGTTCCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: SAWVLQNFLWESQLPVSEGAFGL*PRFLFT
Trigger: AGTGAAGAGGAACCGAGGCCAGAGGCCAAATGCACC...CTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR CAA 72 bp CTCTGGCCTCGGTTCCTCTTCACTTCAGCATGGGTTTaGCAGAATTTTCTCTGGGAATCCCAGCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LWPRFLFTSAWV*QNFLWESQLPV
Trigger: GACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR TCA 90 bp CACTTTCCAGGGCCCAGGCAATCACAAATGGGAGAGAGTGCAGACTCTGTAGTTCCAGAGGTGCTTGCTTaGTGTGAACACCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: HFPGPRQSQMGESADSVVPEVLA*CEHLLS
Trigger: TGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGG...AACTACAGAGTCTGCACTCTCTCCCATTTGTGATTGCCTGGGCCCTGGAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR TCA 90 bp GTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTGCTGCAGCATAAATCAGTaGGGATGTTGTCATGAACTC +
Preference number: 4 (lower is better)
Translates to: VPLQAGNSAGSRDSRHCCCSINQ*GCCHEL
Trigger: GAGTTCATGACAACATCCTCACTGATTTATGCTGCA...GCAGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GTCCAAGGAGAATTCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGCCTCCTTCAGGTCTTaGGCTTCAGTCGTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: VQGEFSHTDAAHTSGCNNASFRS*ASVVGE
Trigger: TTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGC...ATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAATTCTCCTTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR GCA 90 bp GATAGTCATAGCCCCTGGATGGCAGGAGAGAGCCTGACCCTCATTTTGAGGTTGGCTGACTGCTGTTCCTaGCTTTGTGTCACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: DSHSPWMAGESLTLILRLADCCS*LCVTLQ
Trigger: CTGCAAAGTGACACAAAGGCAGGAACAGCAGTCAGC...CAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp ATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACTTAGCGATAGTCATAGCCCCTaGATGGCAGGAGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILPFKAGPQAQLDLPQLSDSHSP*MAGESL
Trigger: CAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATC...GCTAAGTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp CACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTCAACAATCCAAGAAGGCAATaGAGGGACCCTGGGATCATC +
Preference number: 4 (lower is better)
Translates to: HPSSLSRLDHRLSLIYLNNPRRQ*RDPGII
Trigger: GATGATCCCAGGGTCCCTCCATTGCCTTCTTGGATT...GTTGAGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR TCA 90 bp CTGCTAAGGTGCATTTGGCCTCTGGCCTCGGTTCCTCTTCACTTCAGCATGGGTAACTCAGAGCTTGTGTaGTCTACCCATAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: LLRCIWPLASVPLHFSMGNSELV*STHSTF
Trigger: GAAAGTGCTATGGGTAGATCACACAAGCTCTGAGTT...ACCCATGCTGAAGTGAAGAGGAACCGAGGCCAGAGGCCAAATGCACCTTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR GCA 90 bp TGGTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTGATTCCAGGCATTGCTaGTTTAATTGCATAGCACAC +
Preference number: 4 (lower is better)
Translates to: WSPCKLETRQAVEIPGIADSRHC*FNCIAH
Trigger: GTGTGCTATGCAATTAAAGCAGCAATGCCTGGAATC...AGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp CAAATTGATGTGACTTGGACACAGTTTGGCCAAGGGAACATCTGCTGGGCTAGCCAAGGGAACATCTGCTaGGCTAGCTCAAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QIDVTWTQFGQGNICWASQGNIC*ASSSPV
Trigger: CACTGGACTTGAGCTAGCCCAGCAGATGTTCCCTTG...GCTAGCCCAGCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCACATCAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR CCA 90 bp GTCTCTGTGCATGTAGTTGGCAGTCCCGGCCCAGCATCAGTGTCTGTAGTTATTGACTTGGACACAGTTTaGCCAAGGGAACATCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSVHVVGSPGPASVSVVIDLDTV*PREHLL
Trigger: CAGCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTC...AATAACTACAGACACTGATGCTGGGCCGGGACTGCCAACTACATGCACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR TCA 90 bp GTCCAAGGAGAATTCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATCCAGAGGTGCTTGCTTaGTGTGAACACCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VQGEFSHTDAAHTSGCNNPEVLA*CEHLLS
Trigger: TGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGG...ATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAATTCTCCTTGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR TCA 90 bp GTGGTCCAGAGGTGCTTGCTTGATGTGAACACCTGCTCTCACCCTCTAAGCTGTCTCAACTTAGCTTCCTaGGGACCTGTCAGAGATAAA +
Preference number: 4 (lower is better)
Translates to: VVQRCLLDVNTCSHPLSCLNLAS*GPVRDK
Trigger: TTTATCTCTGACAGGTCCTCAGGAAGCTAAGTTGAG...ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GTGGTCCAGAGGTGCTTGCTTGATGTGAACACCTGCTCTCACCCTCTAAGCTGTGTTACAGTCTTGACCTaGTTACCTCTGGGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: VVQRCLLDVNTCSHPLSCVTVLT*LPLGVF
Trigger: AAACACTCCCAGAGGTAAGCAGGTCAAGACTGTAAC...ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp CACTTTCCAGGGCCCAGGCAATCACAAATGGGAGAGAGTGCAGACTCTGTAGTTTTGCAGAATTTTCTCTaGGAATCCCAGCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: HFPGPRQSQMGESADSVVLQNFL*ESQLPV
Trigger: GACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAA...AACTACAGAGTCTGCACTCTCTCCCATTTGTGATTGCCTGGGCCCTGGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
3UTR CAA 72 bp TTCACTCAACTGCAATTAGGAAGAGTCAAGTTCCCTTaGGCGCCTAAAGGAGAACAACGGCCGGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: FTQLQLGRVKFP*APKGEQRPAIP
Trigger: TGGGATTGCCGGCCGTTGTTCTCCTTTAGGCGCCAAAGGGAACTTGACTCTTCCTAATTGCAGTTGAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR TCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGAGCTCAAGGTTGCAGTaGGCCATGTTCGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVSSRLQ*AMFAPP
Trigger: TGGTGGCGCGAACATGGCTCACTGCAACCTTGAGCT...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR TCA 90 bp CGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTAGGCCTCTCAGGCTCGTaGTCCTCCTGCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: RPHSSFDLHFPNDCVQHLGLSGS*SSCLNL
Trigger: GAGGTTGAGGCAGGAGGATCACGAGCCTGAGAGGCC...TAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR GCA 90 bp CAGAGGTGCTTGCTTGATGTGAACACCTGCTCTCACCCTCTAAGCTGTAAATTCTGTAACAATGCCGTTTaGCTCCTTCAGGTCTTGCGC +
Preference number: 4 (lower is better)
Translates to: QRCLLDVNTCSHPLSCKFCNNAV*LLQVLR
Trigger: GCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACA...GAATTTACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412237.6
ENST00000520441.5
ENST00000626778.2
CDS-3UTR GCA 90 bp ATTTTGAATCAAATTGATGTGACTTGGACACAGTTTGGCCAAGGGAACATCTGCTCCGAGTCCCCGTGGTaGCCAGGACAAGACCTAGGA +
Preference number: 4 (lower is better)
Translates to: ILNQIDVTWTQFGQGNICSESPW*PGQDLG
Trigger: TCCTAGGTCTTGTCCTGGGCACCACGGGGACTCGGA...GCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCACATCAATTTGATTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR GCA 90 bp GATAGTCATAGCCCCTGGATGGCAGGAGAGAGCCTGACCCTCATTTTGAGGTTGTTGTCTCGTGCTCATTaGTTTCCACCAGAACATTTC +
Preference number: 4 (lower is better)
Translates to: DSHSPWMAGESLTLILRLLSRAH*FPPEHF
Trigger: GAAATGTTCTGGTGGAAAGCAATGAGCACGAGACAA...CAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCACCCAGGCTGAAGTaGAGTGGCACGACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVSPRLK*SGTTSA
Trigger: AGCTGAGGTCGTGCCACTGCACTTCAGCCTGGGTGA...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR GCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTGTGTTCTCGGCTCACTaGAGCCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVVFSAH*SLCLPG
Trigger: ACCCGGGAGGCAGAGGCTGCAGTGAGCCGAGAACAC...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CCA 90 bp TACGTATACGGTTCAGTGGCATTAAGTACACTCACATTGTTGTGCAACCATCACGCTAACTGGCAGAGCTaGACAGTGGTCCCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: YVYGSVALSTLTLLCNHHANWQS*TVVPLQ
Trigger: TTGCAGGGGGACCACTGTCCAGCTCTGCCAGTTAGC...GTGATGGTTGCACAACAATGTGAGTGTACTTAATGCCACTGAACCGTATACGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp ACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCACCTCACTGCAGCCTTaGCCTCTCAGGCTCGTGATC +
Preference number: 4 (lower is better)
Translates to: TPDLIVVLIYTSLMIVSSTSLQP*PLRLVI
Trigger: GATCACGAGCCTGAGAGGCCAAGGCTGCAGTGAGGT...GCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CCA 90 bp TCCAAGGAGAATTCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGTCCAGTGTACCAAGATaGAGAGTGAGACTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SKENSLTQMLRTPVVVTMSSVPR*RVRLCL
Trigger: GAGGCACAGTCTCACTCTCCATCTTGGTACACTGGA...CATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAATTCTCCTTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR TCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGACTCCTGACCTCAAGTaGTCCACCTACCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVTPDLK*STYHSL
Trigger: GAGGCTGTGGTAGGTGGATCACTTGAGGTCAGGAGT...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR GCA 90 bp CAGAGGTGCTTGCTTGATGTGAACACCTGCTCTCACCCTCTAAGCTGTAAATTCCTTGATGTGAACACCTaGTCTCACCCTCTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QRCLLDVNTCSHPLSCKFLDVNT*SHPLSC
Trigger: ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAG...GAATTTACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412237.6
ENST00000520441.5
ENST00000626778.2
CDS-3UTR GCA 90 bp GAGGACCTGTCAGAGATAAAGGGTGCTCTTAGAGACTTCAGAACTCTCCTGTTACCAGAATGTTTTCTTTaGCCCTCTGGTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: EDLSEIKGALRDFRTLLLPECFL*PSGALP
Trigger: TGGCAGAGCACCAGAGGGGCAAAGAAAACATTCTGG...TAACAGGAGAGTTCTGAAGTCTCTAAGAGCACCCTTTATCTCTGACAGGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGACGACCTCAGCTCACTaGAACCTCCACTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVTTSAH*NLHFLG
Trigger: ACCCAGGAAGTGGAGGTTGCAGTGAGCTGAGGTCGT...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR GCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGGGGACTACAGGCGTGTaGCACCAGTCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVGTTGV*HQSWLI
Trigger: AATTAGCCAGGACTGGTGGCACACGCCTGTAGTCCC...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CCA 90 bp CATGGGTTTTGCAGAATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGTCCCCTCTTCACTTCAGCATaGGTTTTGCAGAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: HGFCRIFSGNPSCLSPSPLFTSA*VLQNFL
Trigger: GAGAAAATTCTGCAAAACCCATGCTGAAGTGAAGAG...GGGACTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR CCA 90 bp CAAATTGATGTGACTTGGACACAGTTTGGCCAAGGGAACATCTGCTGGGCTAGCGAGATAACTGTCCCGTaGTTGGTACTATGGCTCATA +
Preference number: 4 (lower is better)
Translates to: QIDVTWTQFGQGNICWASEITVP*LVLWLI
Trigger: TATGAGCCATAGTACCAACCACGGGACAGTTATCTC...GCTAGCCCAGCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCACATCAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR TCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTTGGAGTGCAGTGGCATaGTCACACCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVWSAVA*SHLTAA
Trigger: GGCTGCAGTGAGGTGTGATCATGCCACTGCACTCCA...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR GCA 90 bp CAGCATGGGTTTTGCAGAATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGTGCTAATTGTGCAAGTTaGTTAACTTCTTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: QHGFCRIFSGNPSCLSPSANCAS*LTSLSL
Trigger: GAGGCTCAAAGAAGTTAAGCAACTTGCACAATTAGC...ACTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAATTCTGCAAAACCCATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR GCA 90 bp ACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCTCACCCAGACTGGAGTaGAGTGGCATGATCACACCT +
Preference number: 4 (lower is better)
Translates to: TPDLIVVLIYTSLMIVSSSPRLE*SGMITP
Trigger: AGGTGTGATCATGCCACTGCACTCCAGTCTGGGTGA...GCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CCA 90 bp ACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCCAGACTGGAGTGCAGTaGCATGATCACACCTCACTG +
Preference number: 4 (lower is better)
Translates to: TPDLIVVLIYTSLMIVSSQTGVQ*HDHTSL
Trigger: CAGTGAGGTGTGATCATGCCACTGCACTCCAGTCTG...GCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CCA 90 bp GTCCAAGGAGAATTCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATCAAATTGATGTGACTTaGACACAGTTTGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VQGEFSHTDAAHTSGCNNQIDVT*TQFGQG
Trigger: CCCTTGGCCAAACTGTGTCCAAGTCACATCAATTTG...ATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAATTCTCCTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR TCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTATGAGGCAGCCCTCCTaGGTAGCTGGAATTACAGGC +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVMRQPS*VAGITG
Trigger: GCCTGTAATTCCAGCTACTCAGGAGGGCTGCCTCAT...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR TCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTAGCCTGGCAACAAAGTaGGATTCCCCCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVSLATK*DSPSSL
Trigger: GAGAGAGGAGGGGGAATCTCACTTTGTTGCCAGGCT...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR GCA 90 bp CAATCACAAATGGGAGAGAGTGCAGACTCTGTAGTTAGGGCACCTGCTCACAGACTTCAGCATGGGTTTTaGAGAATTTTCTCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: QSQMGESADSVVRAPAHRLQHGF*RIFSGN
Trigger: ATTCCCAGAGAAAATTCTGCAAAACCCATGCTGAAG...TCTGTGAGCAGGTGCCCTAACTACAGAGTCTGCACTCTCTCCCATTTGTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR CCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGGCAACCTCCACTTCCTaGGTTCAAGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVATSTS*VQVILL
Trigger: CAGGAGAATCACTTGAACCCAGGAAGTGGAGGTTGC...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTGCCCTCCTGAGTAGCTaGAATTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVALLSS*NYRHVP
Trigger: TGGCACGTGCCTGTAATTCCAGCTACTCAGGAGGGC...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CCA 90 bp CGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTAGTAATCCTAGCACTCTaGCCACCGAGGCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RPHSSFDLHFPNDCVQHLVILAL*PPRQVD
Trigger: ATCCACCTGCCTCGGTGGCCAGAGTGCTAGGATTAC...TAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR GCA 90 bp ATTTTGAATCAAATTGATGTGACTTGGACACAGTTTGGCCAAGGGAACATCTGCATTCTCTCACACAGATaGTGCGCACACCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ILNQIDVTWTQFGQGNICILSHR*CAHQWL
Trigger: CAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAAT...GCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCACATCAATTTGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR GCA 90 bp CGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACCACACTCCAGCTTGTaGAACAGAGACCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RPHSSFDLHFPNDCVQHLPHSSL*NRDPVS
Trigger: TGAGACAGGGTCTCTGTTGCACAAGCTGGAGTGTGG...TAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR TCA 90 bp TTGTTTGTTACAGATCTGGGGAGTTTAGTAAGTAGAATCAGTATTTCGTTAAGGCCTGGAGTCCTCAGATaGAATAGGGCAAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: LFVTDLGSLVSRISISLRPGVLR*NRANPC
Trigger: GCAGGGGTTTGCCCTATTTCATCTGAGGACTCCAGG...CCTTAACGAAATACTGATTCTACTTACTAAACTCCCCAGATCTGTAACAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR TCA 90 bp CAGAGGTGCTTGCTTGATGTGAACACCTGCTCTCACCCTCTAAGCTGTAAATTCATCTGTTTTATCTTATaGTGGCCTCTGTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QRCLLDVNTCSHPLSCKFICFIL*WPLSSF
Trigger: AAAAGAGGACAGAGGCCATCATAAGATAAAACAGAT...GAATTTACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR GCA 90 bp ATTTTGAATCAAATTGATGTGACTTGGACACAGTTTGGCCAAGGGAACATCTGCCTTGATGTGAACACCTaGTCTCACCCTCTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: ILNQIDVTWTQFGQGNICLDVNT*SHPLSC
Trigger: ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAG...GCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCACATCAATTTGATTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR TCA 90 bp TTGTTTGTTACAGATCTGGGGAGTTTAGTAAGTAGAATCAGTATTTCGTTAAGGCTCCTGTTACAGTCTTaGCCTGCTTACCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LFVTDLGSLVSRISISLRLLLQS*PAYLWE
Trigger: CTCCCAGAGGTAAGCAGGTCAAGACTGTAACAGGAG...CCTTAACGAAATACTGATTCTACTTACTAAACTCCCCAGATCTGTAACAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR TCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTGTGGTCCCAGCTAAATaGAAATCTGAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVVVPAK*KSEAGG
Trigger: TCCACCTGCTTCAGATTTTCATTTAGCTGGGACCAC...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGGTGTCCAGCATCTACTaGCCATTTGTTAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVVSSIY*PFVSGF
Trigger: AAAACCACTAACAAATGGCCAGTAGATGCTGGACAC...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520318.1
ENST00000523377.2
CDS-3UTR GCA 90 bp TTGTTTGTTACAGATCTGGGGAGTTTAGTAAGTAGAATCAGTATTTCGTTAAGGAGAACATTTCCACACTaGCCACCCATCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LFVTDLGSLVSRISISLRRTFPH*PPILPF
Trigger: GAAAGGGAGGATGGGTGGGCAGTGTGGAAATGTTCT...CCTTAACGAAATACTGATTCTACTTACTAAACTCCCCAGATCTGTAACAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTAGCCTCCTAAAGTACTaGGATTACAAGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVSLLKY*DYKHEP
Trigger: TGGCTCATGCTTGTAATCCCAGTACTTTAGGAGGCT...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520318.1
ENST00000523377.2
CDS-3UTR CCA 90 bp CGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTAAGTTTGAGACTAGCCTaGCAACAAAGTGAGATTCCC +
Preference number: 4 (lower is better)
Translates to: RPHSSFDLHFPNDCVQHLSLRLA*QQSEIP
Trigger: GGGAATCTCACTTTGTTGCCAGGCTAGTCTCAAACT...TAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR TCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTTCCGGATTGTATCCATaGTTTTGTTCTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVSGLYP*FCSHLF
Trigger: GAAGAGGTGAGAACAAAATCATGGATACAATCCGGA...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520318.1
CDS-3UTR TCA 90 bp CGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTAAGCTGTTTCATCTTTTaGGGAACTGACCGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RPHSSFDLHFPNDCVQHLSCFIF*GTDRLF
Trigger: AAACAGACGGTCAGTTCCTCAAAAGATGAAACAGCT...TAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR TCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCTGGACATTTCGTATaGATGGAATCATCATGTGAT +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVSGHFV*MESSCD
Trigger: ATCACATGATGATTCCATTCATACGAAATGTCCAGA...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR TCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTATATTTTCATCACCCTaGAAAGGAACCCTACACCCA +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVIFSSP*KGTLHP
Trigger: TGGGTGTAGGGTTCCTTTTCAGGGTGATGAAAATAT...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR TCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGGCCAAAGAGAAGAAATaGTTTATTAACATGGGGACA +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVAKEKK*FINMGT
Trigger: TGTCCCCATGTTAATAAATCATTTCTTCTCTTTGGC...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CCA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTGTGTCCAGCATCTACTaGCCATTTGTTAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVVSSIY*PFVSGF
Trigger: AAAACCACTAACAAATGGCCAGTAGATGCTGGACAC...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520318.1
ENST00000523377.2
CDS-3UTR CCA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCTTTCTGCCTATTCTaGACATTTCGTATGAATGGA +
Preference number: 4 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVSFCLF*TFRMNG
Trigger: TCCATTCATACGAAATGTCCAGAATAGGCAGAAAGA...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
3UTR CAA 72 bp TACGTATACGGTTCAGTGGCATTAAGTACACTCACATaGTTGTGCAACCATCACCACCATCTATCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: YVYGSVALSTLT*LCNHHHHLSLE
Trigger: TTCTAAAGATAGATGGTGGTGATGGTTGCACAACAATGTGAGTGTACTTAATGCCACTGAACCGTATACGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR TCA 90 bp TTGTTTGTTACAGATCTGGGGAGTTTAGTAAGTAGAATCAGTATTTCGTTAAGGAGGTCAATGAACAAATaGCCCGCCTGTCATCAAATC +
Preference number: 4 (lower is better)
Translates to: LFVTDLGSLVSRISISLRRSMNK*PACHQI
Trigger: GATTTGATGACAGGCGGGTCATTTGTTCATTGACCT...CCTTAACGAAATACTGATTCTACTTACTAAACTCCCCAGATCTGTAACAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
3UTR CAA 72 bp AATGTACAGTTCAGTGGATTTGAATATATTCAAGAGTaGTGCAGCCTACACCACAAGCTAACTGTAGGATAT +
Preference number: 4 (lower is better)
Translates to: NVQFSGFEYIQE*CSLHHKLTVGY
Trigger: ATATCCTACAGTTAGCTTGTGGTGTAGGCTGCACAACTCTTGAATATATTCAAATCCACTGAACTGTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CAA 90 bp CCAGCTGCCTGTCTCCGAGTCCCCGTGGTGCCCAGGACAAGACCTAGGAGGATGTGCCTCCTTCAGGTCTaGCGCTTCAGTCGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: PAACLRVPVVPRTRPRRMCLLQV*RFSRGR
Trigger: TCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCA...CATCCTCCTAGGTCTTGTCCTGGGCACCACGGGGACTCGGAGACAGGCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR CAA 90 bp CCTGAGGTCCAGCAGGGTGACAGGCTTCTAGCAAGCCATGCACAGCCCAGGCCTACCACAAAGCCCGCCTaGCCTGTGGTAACCAAGCCC +
Preference number: 5 (lower is better)
Translates to: PEVQQGDRLLASHAQPRPTTKPA*PVVTKP
Trigger: GGGCTTGGTTACCACAGGCAAGGCGGGCTTTGTGGT...AGGCCTGGGCTGTGCATGGCTTGCTAGAAGCCTGTCACCCTGCTGGACCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp GTGGTCCAGAGGTGCTTGCTTGATGTGAACACCTGCTCTCACCCTCTAAGCTGTGGGGACCAGACCGCCTaGCACCGGGCCACAGTGGTG +
Preference number: 5 (lower is better)
Translates to: VVQRCLLDVNTCSHPLSCGDQTA*HRATVV
Trigger: CACCACTGTGGCCCGGTGCAAGGCGGTCTGGTCCCC...ACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTGGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp GTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTGCTGCCTCCTTCAGGTCTaGCGCTTCAGTCGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: VPLQAGNSAGSRDSRHCCCLLQV*RFSRGR
Trigger: TCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCA...GCAGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp ATTTTCTCTGGGAATCCCAGCTGCCTGTCTCCGAGTCCCCGTGGTGCCCAGGACTCTGCTAAGGTGCATTaGGCCTCTGGCCTCGGTTCC +
Preference number: 5 (lower is better)
Translates to: IFSGNPSCLSPSPRGAQDSAKVH*ASGLGS
Trigger: GGAACCGAGGCCAGAGGCCAAATGCACCTTAGCAGA...GTCCTGGGCACCACGGGGACTCGGAGACAGGCAGCTGGGATTCCCAGAGAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626778.2
CDS-3UTR CAA 90 bp TGGTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTTGCCTTTGTGTCACTTaGCAGGGGGACCAGACCGCC +
Preference number: 5 (lower is better)
Translates to: WSPCKLETRQAVEIPGIACLCVT*QGDQTA
Trigger: GGCGGTCTGGTCCCCCTGCAAAGTGACACAAAGGCA...AGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp TGGTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTCCCAGAATGTTTTCTTaGCCCCTCTGGTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: WSPCKLETRQAVEIPGIAPRMFS*PLWCSA
Trigger: GGCAGAGCACCAGAGGGGCAAAGAAAACATTCTGGG...AGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS GCA 90 bp TCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGCCGTTTaGCTCCTTCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SHTDAAHTSGCNNAV*LLQVLRFSRGRSLF
Trigger: GAAGAGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412237.6
ENST00000626778.2
CDS GCA 90 bp TCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGCCGTTTaGCTCCTTCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTGATG +
Preference number: 5 (lower is better)
Translates to: SHTDAAHTSGCNNAV*LLQVLRFSRGRSLM
Trigger: CATCAGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520897.5
ENST00000523793.5
CDS-3UTR CAA 90 bp GTCTCTGTGCATGTAGTTGGCAGTCCCGGCCCAGCATCAGTGTCTGTAGTTATTTGCCTCCTTCAGGTCTaGCGCTTCAGTCGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: VSVHVVGSPGPASVSVVICLLQV*RFSRGR
Trigger: TCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCA...AATAACTACAGACACTGATGCTGGGCCGGGACTGCCAACTACATGCACAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS GCA 90 bp CGCACACCAGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTTaGGCTTCAGTCGTGGGCGAAGCCTCTTCGGTGGCACTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: RTPVVVTMPFASFRS*ASVVGEASSVALLF
Trigger: AAACAAAAGTGCCACCGAAGAGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACTGGTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412237.6
ENST00000626778.2
CDS GCA 90 bp TCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGCCGTTTaGCTCCTTCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCATGAT +
Preference number: 5 (lower is better)
Translates to: SHTDAAHTSGCNNAV*LLQVLRFSRGRSHD
Trigger: ATCATGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR CAA 90 bp AATTTCTCTGCCAGCGTGCGTTGTCTACTAACAAGACCACAAAGCCCGCCTTGCAGCCTGACCCTCATTTaGAGGTTGGCTCTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: NFSASVRCLLTRPQSPPCSLTLI*RLALWP
Trigger: CGGCCACAGAGCCAACCTCAAAATGAGGGTCAGGCT...GCAAGGCGGGCTTTGTGGTCTTGTTAGTAGACAACGCACGCTGGCAGAGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp GTGGTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCAGAGTCAAGTTCCCTTaGGCGCCTAAAGGAGAACAA +
Preference number: 5 (lower is better)
Translates to: VVPLQAGNSAGSRDSRHCRVKFP*APKGEQ
Trigger: TTGTTCTCCTTTAGGCGCCAAAGGGAACTTGACTCT...GCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS CCA 90 bp GATACTACTTTTGGAGGCCTCAAGGTCAATATTCCCTCACTTCTGTaGACTGTCTCCGAGTCCCCGTGGTGCCCAGGACAAGACCTAGGA +
Preference number: 5 (lower is better)
Translates to: DTTFGGLKVNIPSLL*TVSESPWCPGQDLG
Trigger: TCCTAGGTCTTGTCCTGGGCACCACGGGGACTCGGAGACAGTCCACAGAAGTGAGGGAATATTGACCTTGAGGCCTCCAAAAGTAGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523793.5
CDS-3UTR CAA 90 bp AATTTCTCTGCCAGCGTGCGTTGTCTACTAACAAGACCACAAAGCCCGCCTTGCGGGCAAACCCCTGCATaGCCGTTGACTAGTACAGGT +
Preference number: 5 (lower is better)
Translates to: NFSASVRCLLTRPQSPPCGQTPA*PLTSTG
Trigger: ACCTGTACTAGTCAACGGCAATGCAGGGGTTTGCCC...GCAAGGCGGGCTTTGTGGTCTTGTTAGTAGACAACGCACGCTGGCAGAGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS GCA 90 bp CGCACACCAGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTTaGGCTTCAGTCGTGGGCGAAGCCATGATTTTGTTCTCACCTCTT +
Preference number: 5 (lower is better)
Translates to: RTPVVVTMPFASFRS*ASVVGEAMILFSPL
Trigger: AAGAGGTGAGAACAAAATCATGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACTGGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR CAA 90 bp CTCTGTGTGGGGACGGGAGGGGTCCTTGTGTCCAAGTGTCAAGTGAGTAGTGCACTTGTCTCGTGCTCATaGCTTTCCACCAGAACATTT +
Preference number: 5 (lower is better)
Translates to: LCVGTGGVLVSKCQVSSALVSCS*LSTRTF
Trigger: AAATGTTCTGGTGGAAAGCAATGAGCACGAGACAAG...TGCACTACTCACTTGACACTTGGACACAAGGACCCCTCCCGTCCCCACACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp TGGTCCCCCTGCAAGCTGGAAACTCGGCAGGCAGTAGAGATTCCAGGCATTGCTAGTACACTCACATTGTaGTGCAACCATCACCACCAT +
Preference number: 5 (lower is better)
Translates to: WSPCKLETRQAVEIPGIASTLTL*CNHHHH
Trigger: ATGGTGGTGATGGTTGCACAACAATGTGAGTGTACT...AGCAATGCCTGGAATCTCTACTGCCTGCCGAGTTTCCAGCTTGCAGGGGGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp CTCTGTGTGGGGACGGGAGGGGTCCTTGTGTCCAAGTGTCAAGTGAGTAGTGCAAGTATTTCGTTAAGGTaGTTTATAGGTAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: LCVGTGGVLVSKCQVSSASISLR*FIGSSA
Trigger: TGCACTGCTACCTATAAACAACCTTAACGAAATACT...TGCACTACTCACTTGACACTTGGACACAAGGACCCCTCCCGTCCCCACACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp GATAGTCATAGCCCCTGGATGGCAGGAGAGAGCCTGACCCTCATTTTGAGGTTGTTAAGTACACTCACATaGTTGTGCAACCATCACCAC +
Preference number: 5 (lower is better)
Translates to: DSHSPWMAGESLTLILRLLSTLT*LCNHHH
Trigger: GTGGTGATGGTTGCACAACAATGTGAGTGTACTTAA...CAACCTCAAAATGAGGGTCAGGCTCTCTCCTGCCATCCAGGGGCTATGACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp CAGAGGTGCTTGCTTGATGTGAACACCTGCTCTCACCCTCTAAGCTGTAAATTCGACCACAGGCTCAGCTaGATTTACCTCAACTTAGCT +
Preference number: 5 (lower is better)
Translates to: QRCLLDVNTCSHPLSCKFDHRLS*IYLNLA
Trigger: AGCTAAGTTGAGGTAAATCAAGCTGAGCCTGTGGTC...GAATTTACAGCTTAGAGGGTGAGAGCAGGTGTTCACATCAAGCAAGCACCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp TGCCCACCCATCCTCCCTTTCAAGGCTGGACCACAGGCTCAGCTTGATTTACCTTTTAATGTGCATTGTTaGTTACAGATCTGGGGAGTT +
Preference number: 5 (lower is better)
Translates to: CPPILPFKAGPQAQLDLPFNVHC*LQIWGV
Trigger: AACTCCCCAGATCTGTAACAAACAATGCACATTAAA...AGGTAAATCAAGCTGAGCCTGTGGTCCAGCCTTGAAAGGGAGGATGGGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp TACGTATACGGTTCAGTGGCATTAAGTACACTCACATTGTTGTGCAACCATCACCTCTGCCAGCGTGCGTaGTCTACTAACAAGACCACA +
Preference number: 5 (lower is better)
Translates to: YVYGSVALSTLTLLCNHHLCQRA*STNKTT
Trigger: TGTGGTCTTGTTAGTAGACAACGCACGCTGGCAGAG...GTGATGGTTGCACAACAATGTGAGTGTACTTAATGCCACTGAACCGTATACGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp CGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACCACCACACTCCAGCTaGTGCAACAGAGACCCTGTC +
Preference number: 5 (lower is better)
Translates to: RPHSSFDLHFPNDCVQHLPPHSS*CNRDPV
Trigger: GACAGGGTCTCTGTTGCACAAGCTGGAGTGTGGTGG...TAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CAA 90 bp CGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTAAACCTCGCAAGTAGCTaGGGACTACAGGCGTGTGCC +
Preference number: 5 (lower is better)
Translates to: RPHSSFDLHFPNDCVQHLNLASS*GLQACA
Trigger: GGCACACGCCTGTAGTCCCAAGCTACTTGCGAGGTT...TAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CAA 90 bp TCCAAGGAGAATTCTCTCACACAGATGCTGCGCACACCAGTGGTTGTAACAATGATAACTGTCCCGTGGTaGGTACTATGGCTCATAGAT +
Preference number: 5 (lower is better)
Translates to: SKENSLTQMLRTPVVVTMITVPW*VLWLID
Trigger: ATCTATGAGCCATAGTACCAACCACGGGACAGTTAT...CATTGTTACAACCACTGGTGTGCGCAGCATCTGTGTGAGAGAATTCTCCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR CAA 90 bp TACGTATACGGTTCAGTGGCATTAAGTACACTCACATTGTTGTGCAACCATCACTCTCCTGTTACAGTCTaGACCTGCTTACCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: YVYGSVALSTLTLLCNHHSPVTV*TCLPLG
Trigger: TCCCAGAGGTAAGCAGGTCAAGACTGTAACAGGAGA...GTGATGGTTGCACAACAATGTGAGTGTACTTAATGCCACTGAACCGTATACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412237.6
CDS-3UTR CAA 90 bp ATTTTGAATCAAATTGATGTGACTTGGACACAGTTTGGCCAAGGGAACATCTGCGGCGAAGCCATGATTTaGTTCTCACCTCTTCGGTGG +
Preference number: 5 (lower is better)
Translates to: ILNQIDVTWTQFGQGNICGEAMI*FSPLRW
Trigger: CCACCGAAGAGGTGAGAACAAAATCATGGCTTCGCC...GCAGATGTTCCCTTGGCCAAACTGTGTCCAAGTCACATCAATTTGATTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS-3UTR CAA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGGTTTGGGAGCTTGTCTaGTTCTCAACTACTACGCAG +
Preference number: 5 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVVWELV*FSTTTQ
Trigger: CTGCGTAGTAGTTGAGAACAAGACAAGCTCCCAAAC...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CAA 90 bp GTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATCTACTGGCCATTTGTTAAGTGTGTGGATTACTaGTGTAAGCCACAGTGCCCG +
Preference number: 5 (lower is better)
Translates to: VLIYTSLMIVSSIYWPFVKCVDY*CKPQCP
Trigger: CGGGCACTGTGGCTTACACAAGTAATCCACACACTT...AACAAATGGCCAGTAGATGCTGGACACAATCATTAGGGAAGTGTAAATCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CAA 90 bp ACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCATTGTATCCATGATTTaGTTCTCACCTCTTCGGTGG +
Preference number: 5 (lower is better)
Translates to: TPDLIVVLIYTSLMIVSSIVSMI*FSPLRW
Trigger: CCACCGAAGAGGTGAGAACAAAATCATGGATACAAT...GCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520318.1
CDS-3UTR CAA 90 bp ACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTCCAGCGAATATATTCAAGAGTaGTGCAGCCTACACCACAAG +
Preference number: 5 (lower is better)
Translates to: TPDLIVVLIYTSLMIVSSEYIQE*CSLHHK
Trigger: CTTGTGGTGTAGGCTGCACAACTCTTGAATATATTC...GCTGGACACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS-3UTR CAA 90 bp GCCACTACACCCGACCTCATAGTAGTTTTGATTTACACTTCCCTAATGATTGTGTTGCCCAGGCTGAATTaGATGTTATTTCAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: ATTPDLIVVLIYTSLMIVLPRLN*MLFQVD
Trigger: ATCAACTTGAAATAACATCAAATTCAGCCTGGGCAA...CACAATCATTAGGGAAGTGTAAATCAAAACTACTATGAGGTCGGGTGTAGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523377.2
CDS TCA 90 bp CAAACAAGGAACTTTAGGCATAAGATGTTACGCATACTGTTCTCTTaGTCTGTGGTTACAGAAATAGCATTAGTATTTGCTTTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: QTRNFRHKMLRILFS*SVVTEIALVFALPE
Trigger: TTCAGGCAAAGCAAATACTAATGCTATTTCTGTAACCACAGATCAAGAGAACAGTATGCGTAACATCTTATGCCTAAAGTTCCTTGTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523793.5
CDS GCA 72 bp GTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTTaGGCTTCAGTCGTGGGCGAAGCCTCTTCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: VVVTMPFASFRS*ASVVGEASSVA
Trigger: TGCCACCGAAGAGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412237.6
ENST00000626778.2
CDS GCA 72 bp GATGCTGCGCACACCAGTGGTTGTAACAATGCCGTTTaGCTCCTTCAGGTCTTGCGCTTCAGTCGTGGGCGA +
Preference number: 6 (lower is better)
Translates to: DAAHTSGCNNAV*LLQVLRFSRGR
Trigger: TCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACTGGTGTGCGCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412237.6
ENST00000520441.5
ENST00000520897.5
ENST00000523793.5
ENST00000626778.2
CDS CAA 72 bp AGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTaGCGCTTCAGTCGTGGGCGAAGCCTCTTCGGTGGC +
Preference number: 6 (lower is better)
Translates to: SGCNNAVCLLQV*RFSRGRSLFGG
Trigger: GCCACCGAAGAGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412237.6
ENST00000626778.2
CDS CAA 90 bp GCGCACACCAGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTaGCGCTTCAGTCGTGGGCGAAGCCTCTTCGGTGGCACTTTTGTT +
Preference number: 6 (lower is better)
Translates to: AHTSGCNNAVCLLQV*RFSRGRSLFGGTFV
Trigger: AACAAAAGTGCCACCGAAGAGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACTGGTGTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412237.6
ENST00000626778.2
CDS CCA 72 bp TGCCGTTTGCCTCCTTCAGGTCTTGCGCTTCAGTCGTaGGCGAAGCCTGATGAAGGAATGAACAAGGGATTG +
Preference number: 6 (lower is better)
Translates to: CRLPPSGLALQS*AKPDEGMNKGL
Trigger: CAATCCCTTGTTCATTCCTTCATCAGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520897.5
ENST00000523793.5
CDS CAA 90 bp GCGCACACCAGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTaGCGCTTCAGTCGTGGGCGAAGCCATGATTTTGTTCTCACCTCT +
Preference number: 6 (lower is better)
Translates to: AHTSGCNNAVCLLQV*RFSRGRSHDFVLTS
Trigger: AGAGGTGAGAACAAAATCATGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACTGGTGTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS CAA 72 bp AGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTaGCGCTTCAGTCGTGGGCGAAGCCTGATGAAGGAA +
Preference number: 6 (lower is better)
Translates to: SGCNNAVCLLQV*RFSRGRSLMKE
Trigger: TTCCTTCATCAGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520897.5
ENST00000523793.5
CDS GCA 72 bp GTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTTaGGCTTCAGTCGTGGGCGAAGCCATGATTTTGTTC +
Preference number: 6 (lower is better)
Translates to: VVVTMPFASFRS*ASVVGEAMILF
Trigger: GAACAAAATCATGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS CAA 72 bp AGTGGTTGTAACAATGCCGTTTGCCTCCTTCAGGTCTaGCGCTTCAGTCGTGGGCGAAGCCATGATTTTGTT +
Preference number: 6 (lower is better)
Translates to: SGCNNAVCLLQV*RFSRGRSHDFV
Trigger: AACAAAATCATGGCTTCGCCCACGACTGAAGCGCAAGACCTGAAGGAGGCAAACGGCATTGTTACAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520441.5
CDS GCA 72 bp AACTTGTTGCCTTCTTACGAACGGGCTGAAAAGGGCTaGCGGTCTCCTAGAAGTTGTTATTACAACGACAGC +
Preference number: 6 (lower is better)
Translates to: NLLPSYERAEKG*RSPRSCYYNDS
Trigger: GCTGTCGTTGTAATAACAACTTCTAGGAGACCGGCAGCCCTTTTCAGCCCGTTCGTAAGAAGGCAACAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517396.5
ENST00000523075.1
ENST00000523793.5
CDS TCA 72 bp GTTTCTCTCTTAGGCACCAATAAATGGTTGTCGATGTaGACCTCTAATCAACAAGCTGGAGAATCAGTTGGA +
Preference number: 6 (lower is better)
Translates to: VSLLGTNKWLSM*TSNQQAGESVG
Trigger: TCCAACTGATTCTCCAGCTTGTTGATTAGAGGTTCACATCGACAACCATTTATTGGTGCCTAAGAGAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520897.5
ENST00000523793.5
CDS CAA 72 bp ACAGTTGTTCAAATCTTTGGTAATCTCATTTGCTGTTaGCCACAGCTCAGTGCAATAGACTTTTACCGTGGG +
Preference number: 6 (lower is better)
Translates to: TVVQIFGNLICC*PQLSAIDFYRG
Trigger: CCCACGGTAAAAGTCTATTGCACTGAGCTGTGGCAAACAGCAAATGAGATTACCAAAGATTTGAACAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523075.1
ENST00000523793.5
CDS CAA 90 bp TCTAAATTAACAGTTGTTCAAATCTTTGGTAATCTCATTTGCTGTTaGCCACAGCTCAGTGCAATAGACTTTTACCGTGGGCACTGGGCA +
Preference number: 6 (lower is better)
Translates to: SKLTVVQIFGNLICC*PQLSAIDFYRGHWA
Trigger: TGCCCAGTGCCCACGGTAAAAGTCTATTGCACTGAGCTGTGGCAAACAGCAAATGAGATTACCAAAGATTTGAACAACTGTTAATTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523075.1
ENST00000523793.5
CDS TCA 72 bp AACTTTAGGCATAAGATGTTACGCATACTGTTCTCTTaGTCTGTGGTTACAGAAATAGCATTAGTATTTGCT +
Preference number: 6 (lower is better)
Translates to: NFRHKMLRILFS*SVVTEIALVFA
Trigger: AGCAAATACTAATGCTATTTCTGTAACCACAGATCAAGAGAACAGTATGCGTAACATCTTATGCCTAAAGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523793.5