Pregenerated sensors for LYPLAL1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000228063Ensembl transcript IDs: ENST00000654859.1, ENST00000655283.1, ENST00000657470.1, ENST00000658274.1, ENST00000661230.1, ENST00000668290.1, ENST00000669535.1, ENST00000670257.1, ENST00000670576.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCAGCAGCGCTGCGCATGCGCGCTCCCGGGCGTGCTCCCGCGCGTaGCTGCGTATTTGCGTGCGCGGCCCCGCGCGGCAACGCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ASSAAHARSRACSRA*LRICVRGPARQRRG Trigger: GCCCCTGCGTTGCCGCGCGGGGCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCAGCGCTGCTGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 90 bp | GCAGCGCTGCGCATGCGCGCTCCCGGGCGTGCTCCCGCGCGTGCCTaGGTATTTGCGTGCGCGGCCCCGCGCGGCAACGCAGGGGCGGAA | + |
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Preference number: 5 (lower is better) Translates to: AALRMRAPGRAPARA*VFACAAPRGNAGAE Trigger: TTCCGCCCCTGCGTTGCCGCGCGGGGCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCAGCGCTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 90 bp | CTCAGAGAGCGGGCCAGCAGCGCTGCGCATGCGCGCTCCCGGGCGTaGTCCCGCGCGTGCCTGCGTATTTGCGTGCGCGGCCCCGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: LRERASSAAHARSRA*SRACLRICVRGPAR Trigger: CCGCGCGGGGCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCAGCGCTGCTGGCCCGCTCTCTGAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 90 bp | ATGCGCGCTCCCGGGCGTGCTCCCGCGCGTGCCTGCGTATTTGCGTaGGCGGCCCCGCGCGGCAACGCAGGGGCGGAACCGCATGACTGG | + |
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Preference number: 5 (lower is better) Translates to: MRAPGRAPARACVFA*AAPRGNAGAEPHDW Trigger: CCAGTCATGCGGTTCCGCCCCTGCGTTGCCGCGCGGGGCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCAT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 90 bp | CAGGGGCGGAACCGCATGACTGGCAGTGGCATCAGCGATGGCGGCTaGGTCGGGGTCGGTTCTGCAGCGCTGTATCGTGTCGCCGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: QGRNRMTGSGISDGG*VGVGSAALYRVAGR Trigger: CCTGCCGGCGACACGATACAGCGCTGCAGAACCGACCCCGACGCAGCCGCCATCGCTGATGCCACTGCCAGTCATGCGGTTCCGCCCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 90 bp | GACTGGCAGTGGCATCAGCGATGGCGGCTGCGTCGGGGTCGGTTCTaGAGCGCTGTATCGTGTCGCCGGCAGGGAGGCATAGCGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: DWQWHQRWRLRRGRF*SAVSCRRQGGIAPL Trigger: GAGAGGCGCTATGCCTCCCTGCCGGCGACACGATACAGCGCTGCAGAACCGACCCCGACGCAGCCGCCATCGCTGATGCCACTGCCAGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 90 bp | GACCCCAAAGTATTGAAAGCTCCTCAGAGAGCGGGCCAGCAGCGCTaGGCATGCGCGCTCCCGGGCGTGCTCCCGCGCGTGCCTGCGTAT | + |
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Preference number: 5 (lower is better) Translates to: DPKVLKAPQRAGQQR*ACALPGVLPRVPAY Trigger: ATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCAGCGCTGCTGGCCCGCTCTCTGAGGAGCTTTCAATACTTTGGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS CCA 90 bp | GGCAACGCAGGGGCGGAACCGCATGACTGGCAGTGGCATCAGCGATaGCGGCTGCGTCGGGGTCGGTTCTGCAGCGCTGTATCGTGTCGC | + |
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Preference number: 5 (lower is better) Translates to: GNAGAEPHDWQWHQR*RLRRGRFCSAVSCR Trigger: GCGACACGATACAGCGCTGCAGAACCGACCCCGACGCAGCCGCCATCGCTGATGCCACTGCCAGTCATGCGGTTCCGCCCCTGCGTTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 90 bp | AAAGTATTGAAAGCTCCTCAGAGAGCGGGCCAGCAGCGCTGCGCATaGGCGCTCCCGGGCGTGCTCCCGCGCGTGCCTGCGTATTTGCGT | + |
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Preference number: 5 (lower is better) Translates to: KVLKAPQRAGQQRCA*ALPGVLPRVPAYLR Trigger: ACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCAGCGCTGCTGGCCCGCTCTCTGAGGAGCTTTCAATACTTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS CCA 90 bp | TGCACCAGTAGTGGTGGTGGCACGGGGGCAGAGCACTGGCAGGCATaGGGCTGGCACCCTCCATGCATGTGTTCAGGCCAGTCAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: CTSSGGGTGAEHWQA*GWHPPCMCSGQSAT Trigger: AGTGGCTGACTGGCCTGAACACATGCATGGAGGGTGCCAGCCCCATGCCTGCCAGTGCTCTGCCCCCGTGCCACCACCACTACTGGTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655283.1 ENST00000657470.1 |
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| CDS CCA 90 bp | GGGTGTGTTTGCACCAGTAGTGGTGGTGGCACGGGGGCAGAGCACTaGCAGGCATGGGGCTGGCACCCTCCATGCATGTGTTCAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: GCVCTSSGGGTGAEH*QAWGWHPPCMCSGQ Trigger: CTGGCCTGAACACATGCATGGAGGGTGCCAGCCCCATGCCTGCCAGTGCTCTGCCCCCGTGCCACCACCACTACTGGTGCAAACACACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655283.1 ENST00000657470.1 |
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| CDS GCA 90 bp | TGTGGCACTGGCAGGCACATGGGTGCTGGCCTCCATCAGGGTGTTTaGAGTGGTGGTGGTGACAGAGTGACATGGGAGAGGGGTGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: CGTGRHMGAGLHQGV*SGGGDRVTWERGVG Trigger: CCCCACACCCCTCTCCCATGTCACTCTGTCACCACCACCACTGCAAACACCCTGATGGAGGCCAGCACCCATGTGCCTGCCAGTGCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS TCA 90 bp | ACTACCACCAACAGCAGCAGCATGGCAGGGTGCACCCTTGTTGACTaGGGTGTGGCACTGGCAGGCACATGGGTGCTGGCCTCCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: TTTNSSSMAGCTLVD*GVALAGTWVLASIR Trigger: CCTGATGGAGGCCAGCACCCATGTGCCTGCCAGTGCCACACCTCAGTCAACAAGGGTGCACCCTGCCATGCTGCTGCTGTTGGTGGTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS CCA 90 bp | AGTAGTGGTGGTGGCACGGGGGCAGAGCACTGGCAGGCATGGGGCTaGCACCCTCCATGCATGTGTTCAGGCCAGTCAGCCACTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: SSGGGTGAEHWQAWG*HPPCMCSGQSATVF Trigger: AAAAACAGTGGCTGACTGGCCTGAACACATGCATGGAGGGTGCCAGCCCCATGCCTGCCAGTGCTCTGCCCCCGTGCCACCACCACTACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655283.1 ENST00000657470.1 |
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| CDS TCA 90 bp | GCACATGGGTGCTGGCCTCCATCAGGGTGTTTGCAGTGGTGGTGGTaGCAGAGTGACATGGGAGAGGGGTGTGGGGCTTCTGGCATCCAT | + |
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Preference number: 5 (lower is better) Translates to: AHGCWPPSGCLQWWW*QSDMGEGCGASGIH Trigger: ATGGATGCCAGAAGCCCCACACCCCTCTCCCATGTCACTCTGTCACCACCACCACTGCAAACACCCTGATGGAGGCCAGCACCCATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS CCA 90 bp | GGCCTCCATCAGGGTGTTTGCAGTGGTGGTGGTGACAGAGTGACATaGGAGAGGGGTGTGGGGCTTCTGGCATCCATGGGTGTGTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: GLHQGVCSGGGDRVT*ERGVGLLASMGVFA Trigger: TGCAAACACACCCATGGATGCCAGAAGCCCCACACCCCTCTCCCATGTCACTCTGTCACCACCACCACTGCAAACACCCTGATGGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS CCA 90 bp | AGTGGGATCTGTGATCATTTGCAACTACCACCAACAGCAGCAGCATaGCAGGGTGCACCCTTGTTGACTGAGGTGTGGCACTGGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: SGICDHLQLPPTAAA*QGAPLLTEVWHWQA Trigger: TGCCTGCCAGTGCCACACCTCAGTCAACAAGGGTGCACCCTGCCATGCTGCTGCTGTTGGTGGTAGTTGCAAATGATCACAGATCCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS TCA 90 bp | AAACTCAGTACAGTTACAACTGCCTCAAACTTGACCCCAAAGTATTaGAAGCTCCTCAGAGAGCGGGCCAGCAGCGCTGCGCATGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: KLSTVTTASNLTPKY*KLLRERASSAAHAR Trigger: GCGCGCATGCGCAGCGCTGCTGGCCCGCTCTCTGAGGAGCTTTCAATACTTTGGGGTCAAGTTTGAGGCAGTTGTAACTGTACTGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654859.1 ENST00000668290.1 |
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| CDS CCA 90 bp | CTTATGGTAAATGTTGCCAGTCCTGTGTTTCTGTCTTCAAAGAAGTaGGCTCCCCTCTGGCCCAGGGTGGGTTCAAAAATGCCATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LMVNVASPVFLSSKK*APLWPRVGSKMPSR Trigger: CCTGGATGGCATTTTTGAACCCACCCTGGGCCAGAGGGGAGCCCACTTCTTTGAAGACAGAAACACAGGACTGGCAACATTTACCATAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000658274.1 ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS TCA 90 bp | GTGGCAGGAAGTTTGCAGGAAGATGCGGCATTGGAGAAAGAAGAATaGGGAGGCTGGCACAATGGAAGAACATCTACATTTCCATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VAGSLQEDAALEKEE*GGWHNGRTSTFPSS Trigger: GGAGGATGGAAATGTAGATGTTCTTCCATTGTGCCAGCCTCCTCATTCTTCTTTCTCCAATGCCGCATCTTCCTGCAAACTTCCTGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS TCA 90 bp | CTGGTCACAACATTCTGCTGGGTGGTGCCAGCCAAAGTGCTTCATTaGGTGATGGTAGTGGGATCTGTGATCATTTGCAACTACCACCAA | + |
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Preference number: 5 (lower is better) Translates to: LVTTFCWVVPAKVLH*VMVVGSVIICNYHQ Trigger: TTGGTGGTAGTTGCAAATGATCACAGATCCCACTACCATCACTCAATGAAGCACTTTGGCTGGCACCACCCAGCAGAATGTTGTGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS TCA 90 bp | GACCCAACTTTTGGCTGCATTGGCAAATGTCCTGTTTTAGCCAGCTaGACAAGCTTCTGGAAGGAAGTTTGCACCCATAGAGACCACGAT | + |
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Preference number: 5 (lower is better) Translates to: DPTFGCIGKCPVLAS*TSFWKEVCTHRDHD Trigger: ATCGTGGTCTCTATGGGTGCAAACTTCCTTCCAGAAGCTTGTTCAGCTGGCTAAAACAGGACATTTGCCAATGCAGCCAAAAGTTGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS GCA 90 bp | CCAACCATGCTTCCCTCACCTTGGGTCCTCCCACTTCTGCAATCCTaGTGTCAACTTCACTCAATTCTTTTCAGGGAAATGGAAAAACTG | + |
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Preference number: 5 (lower is better) Translates to: PTMLPSPWVLPLLQS*CQLHSILFREMEKL Trigger: CAGTTTTTCCATTTCCCTGAAAAGAATTGAGTGAAGTTGACAGCAGGATTGCAGAAGTGGGAGGACCCAAGGTGAGGGAAGCATGGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655283.1 |
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| CDS GCA 90 bp | AGAAATTCCCAACCATGCTTCCCTCACCTTGGGTCCTCCCACTTCTaGAATCCTGCTGTCAACTTCACTCAATTCTTTTCAGGGAAATGG | + |
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Preference number: 5 (lower is better) Translates to: RNSQPCFPHLGSSHF*NPAVNFTQFFSGKW Trigger: CCATTTCCCTGAAAAGAATTGAGTGAAGTTGACAGCAGGATTGCAGAAGTGGGAGGACCCAAGGTGAGGGAAGCATGGTTGGGAATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655283.1 |
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| CDS CCA 90 bp | ATTGCCAATGTTCACTCAAGGCCCAAGCACTCTTTATTCAGCTGGTaGCAAATCCAGCCAGGCTTGTGTTTTTCCCTTCAGTATGACGAG | + |
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Preference number: 5 (lower is better) Translates to: IANVHSRPKHSLFSW*QIQPGLCFSLQYDE Trigger: CTCGTCATACTGAAGGGAAAAACACAAGCCTGGCTGGATTTGCCACCAGCTGAATAAAGAGTGCTTGGGCCTTGAGTGAACATTGGCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000658274.1 ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS TCA 90 bp | TCTCCCCCAACTTGCTCCTCTTCTTGTTTCCTCCATCTCTCTGAATaGCAGACACCTCTGAGTACTGAATTTCTCAGGCAAAAATGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SPPTCSSSCFLHLSE*QTPLSTEFLRQKWW Trigger: CCACCATTTTTGCCTGAGAAATTCAGTACTCAGAGGTGTCTGTCATTCAGAGAGATGGAGGAAACAAGAAGAGGAGCAAGTTGGGGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS CCA 90 bp | CTGTTGTTTGAGTTGTGGCAGGAAGTTTGCAGGAAGATGCGGCATTaGAGAAAGAAGAATGAGGAGGCTGGCACAATGGAAGAACATCTA | + |
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Preference number: 5 (lower is better) Translates to: LLFELWQEVCRKMRH*RKKNEEAGTMEEHL Trigger: TAGATGTTCTTCCATTGTGCCAGCCTCCTCATTCTTCTTTCTCCAATGCCGCATCTTCCTGCAAACTTCCTGCCACAACTCAAACAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS TCA 90 bp | TTATTAGCAAAACTAAACTCAGTACAGTTACAACTGCCTCAAACTTaGCCCCAAAGTATTGAAAGCTCCTCAGAGAGCGGGCCAGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: LLAKLNSVQLQLPQT*PQSIESSSESGPAA Trigger: CGCTGCTGGCCCGCTCTCTGAGGAGCTTTCAATACTTTGGGGTCAAGTTTGAGGCAGTTGTAACTGTACTGAGTTTAGTTTTGCTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654859.1 ENST00000668290.1 ENST00000670257.1 |
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| CDS TCA 90 bp | TTTTCTTTTCATTTCGGGACTGAGAGCCATCCCTTTGAAAGATGTTaGGCTGGAAGAGGAGCGATGTCTGTGGCTGTGGGAGAAAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: FSFHFGTESHPFERC*AGRGAMSVAVGERK Trigger: TTTTCTTTCTCCCACAGCCACAGACATCGCTCCTCTTCCAGCTCAACATCTTTCAAAGGGATGGCTCTCAGTCCCGAAATGAAAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS GCA 90 bp | TTATTTTCCTGTTGTTTGAGTTGTGGCAGGAAGTTTGCAGGAAGATaGGGCATTGGAGAAAGAAGAATGAGGAGGCTGGCACAATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LFSCCLSCGRKFAGR*GIGERRMRRLAQWK Trigger: CTTCCATTGTGCCAGCCTCCTCATTCTTCTTTCTCCAATGCCGCATCTTCCTGCAAACTTCCTGCCACAACTCAAACAACAGGAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS TCA 90 bp | GGCTGCAGTTCAGGAGGATTTCAGATCATTTATTTTCCTGTTGTTTaGGTTGTGGCAGGAAGTTTGCAGGAAGATGCGGCATTGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: GCSSGGFQIIYFPVV*VVAGSLQEDAALEK Trigger: TTTCTCCAATGCCGCATCTTCCTGCAAACTTCCTGCCACAACTCAAACAACAGGAAAATAAATGATCTGAAATCCTCCTGAACTGCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS GCA 72 bp | CCCGGGCGTGCTCCCGCGCGTGCCTGCGTATTTGCGTaGGCGGCCCCGCGCGGCAACGCAGGGGCGGAACCG | + |
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Preference number: 6 (lower is better) Translates to: PGRAPARACVFA*AAPRGNAGAEP Trigger: CGGTTCCGCCCCTGCGTTGCCGCGCGGGGCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 72 bp | CGCTCCCGGGCGTGCTCCCGCGCGTGCCTGCGTATTTaGGTGCGCGGCCCCGCGCGGCAACGCAGGGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: RSRACSRACLRI*VRGPARQRRGG Trigger: TCCGCCCCTGCGTTGCCGCGCGGGGCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 72 bp | CGCATGCGCGCTCCCGGGCGTGCTCCCGCGCGTGCCTaGGTATTTGCGTGCGCGGCCCCGCGCGGCAACGCA | + |
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Preference number: 6 (lower is better) Translates to: RMRAPGRAPARA*VFACAAPRGNA Trigger: TGCGTTGCCGCGCGGGGCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 72 bp | GCTGCGCATGCGCGCTCCCGGGCGTGCTCCCGCGCGTaGCTGCGTATTTGCGTGCGCGGCCCCGCGCGGCAA | + |
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Preference number: 6 (lower is better) Translates to: AAHARSRACSRA*LRICVRGPARQ Trigger: TTGCCGCGCGGGGCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 72 bp | CGGGCCAGCAGCGCTGCGCATGCGCGCTCCCGGGCGTaGTCCCGCGCGTGCCTGCGTATTTGCGTGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RASSAAHARSRA*SRACLRICVRG Trigger: GCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCAGCGCTGCTGGCCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS CAA 90 bp | TGCGCATGCGCGCTCCCGGGCGTGCTCCCGCGCGTGCCTGCGTATTaGCGTGCGCGGCCCCGCGCGGCAACGCAGGGGCGGAACCGCATG | + |
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Preference number: 6 (lower is better) Translates to: CACALPGVLPRVPAY*RARPRAATQGRNRM Trigger: CATGCGGTTCCGCCCCTGCGTTGCCGCGCGGGGCCGCGCACGCAAATACGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS TCA 72 bp | CGCGGCCCCGCGCGGCAACGCAGGGGCGGAACCGCATaGCTGGCAGTGGCATCAGCGATGGCGGCTGCGTCG | + |
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Preference number: 6 (lower is better) Translates to: RGPARQRRGGTA*LAVASAMAAAS Trigger: CGACGCAGCCGCCATCGCTGATGCCACTGCCAGTCATGCGGTTCCGCCCCTGCGTTGCCGCGCGGGGCCGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 72 bp | AAAGCTCCTCAGAGAGCGGGCCAGCAGCGCTGCGCATaGGCGCTCCCGGGCGTGCTCCCGCGCGTGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: KAPQRAGQQRCA*ALPGVLPRVPA Trigger: CGCAGGCACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCAGCGCTGCTGGCCCGCTCTCTGAGGAGCTTT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 72 bp | GTATTGAAAGCTCCTCAGAGAGCGGGCCAGCAGCGCTaGGCATGCGCGCTCCCGGGCGTGCTCCCGCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: VLKAPQRAGQQR*ACALPGVLPRV Trigger: CACGCGCGGGAGCACGCCCGGGAGCGCGCATGCGCAGCGCTGCTGGCCCGCTCTCTGAGGAGCTTTCAATAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654859.1 ENST00000668290.1 |
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| CDS CCA 72 bp | CGCGGCAACGCAGGGGCGGAACCGCATGACTGGCAGTaGCATCAGCGATGGCGGCTGCGTCGGGGTCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RGNAGAEPHDWQ*HQRWRLRRGRF Trigger: GAACCGACCCCGACGCAGCCGCCATCGCTGATGCCACTGCCAGTCATGCGGTTCCGCCCCTGCGTTGCCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS CCA 72 bp | GGTGGCACGGGGGCAGAGCACTGGCAGGCATGGGGCTaGCACCCTCCATGCATGTGTTCAGGCCAGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GGTGAEHWQAWG*HPPCMCSGQSA Trigger: GGCTGACTGGCCTGAACACATGCATGGAGGGTGCCAGCCCCATGCCTGCCAGTGCTCTGCCCCCGTGCCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655283.1 ENST00000657470.1 |
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| CDS CCA 72 bp | GGGGCGGAACCGCATGACTGGCAGTGGCATCAGCGATaGCGGCTGCGTCGGGGTCGGTTCTGCAGCGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GAEPHDWQWHQR*RLRRGRFCSAV Trigger: TACAGCGCTGCAGAACCGACCCCGACGCAGCCGCCATCGCTGATGCCACTGCCAGTCATGCGGTTCCGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS GCA 72 bp | TGGCATCAGCGATGGCGGCTGCGTCGGGGTCGGTTCTaGAGCGCTGTATCGTGTCGCCGGCAGGGAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: WHQRWRLRRGRF*SAVSCRRQGGI Trigger: TATGCCTCCCTGCCGGCGACACGATACAGCGCTGCAGAACCGACCCCGACGCAGCCGCCATCGCTGATGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668290.1 |
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| CDS CCA 72 bp | AGTGGTGGTGGCACGGGGGCAGAGCACTGGCAGGCATaGGGCTGGCACCCTCCATGCATGTGTTCAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SGGGTGAEHWQA*GWHPPCMCSGQ Trigger: CTGGCCTGAACACATGCATGGAGGGTGCCAGCCCCATGCCTGCCAGTGCTCTGCCCCCGTGCCACCACCACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655283.1 ENST00000657470.1 |
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| CDS CCA 72 bp | TGCACCAGTAGTGGTGGTGGCACGGGGGCAGAGCACTaGCAGGCATGGGGCTGGCACCCTCCATGCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: CTSSGGGTGAEH*QAWGWHPPCMC Trigger: ACACATGCATGGAGGGTGCCAGCCCCATGCCTGCCAGTGCTCTGCCCCCGTGCCACCACCACTACTGGTGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655283.1 ENST00000657470.1 |
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| CDS CCA 72 bp | TGGCAGGGTGCACCCTTGTTGACTGAGGTGTGGCACTaGCAGGCACATGGGTGCTGGCCTCCATCAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: WQGAPLLTEVWH*QAHGCWPPSGC Trigger: ACACCCTGATGGAGGCCAGCACCCATGTGCCTGCCAGTGCCACACCTCAGTCAACAAGGGTGCACCCTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS GCA 72 bp | GGCAGGCACATGGGTGCTGGCCTCCATCAGGGTGTTTaGAGTGGTGGTGGTGACAGAGTGACATGGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GRHMGAGLHQGV*SGGGDRVTWER Trigger: CCTCTCCCATGTCACTCTGTCACCACCACCACTGCAAACACCCTGATGGAGGCCAGCACCCATGTGCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS CAA 90 bp | TTGCAACTACCACCAACAGCAGCAGCATGGCAGGGTGCACCCTTGTaGACTGAGGTGTGGCACTGGCAGGCACATGGGTGCTGGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LQLPPTAAAWQGAPL*TEVWHWQAHGCWPP Trigger: TGGAGGCCAGCACCCATGTGCCTGCCAGTGCCACACCTCAGTCAACAAGGGTGCACCCTGCCATGCTGCTGCTGTTGGTGGTAGTTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS CCA 72 bp | CAGGGTGTTTGCAGTGGTGGTGGTGACAGAGTGACATaGGAGAGGGGTGTGGGGCTTCTGGCATCCATGGGT | + |
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Preference number: 6 (lower is better) Translates to: QGVCSGGGDRVT*ERGVGLLASMG Trigger: ACCCATGGATGCCAGAAGCCCCACACCCCTCTCCCATGTCACTCTGTCACCACCACCACTGCAAACACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS CAA 90 bp | CATTTGCAACTACCACCAACAGCAGCAGCATGGCAGGGTGCACCCTaGTTGACTGAGGTGTGGCACTGGCAGGCACATGGGTGCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: HLQLPPTAAAWQGAP*LTEVWHWQAHGCWP Trigger: AGGCCAGCACCCATGTGCCTGCCAGTGCCACACCTCAGTCAACAAGGGTGCACCCTGCCATGCTGCTGCTGTTGGTGGTAGTTGCAAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS CCA 72 bp | TGTCTTCAAAGAAGTGGGCTCCCCTCTGGCCCAGGGTaGGTTCAAAAATGCCATCCAGGAGGCAAGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: CLQRSGLPSGPG*VQKCHPGGKAW Trigger: CCAGGCCTTGCCTCCTGGATGGCATTTTTGAACCCACCCTGGGCCAGAGGGGAGCCCACTTCTTTGAAGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658274.1 |
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| CDS CCA 72 bp | TGTCTTCAAAGAAGTGGGCTCCCCTCTGGCCCAGGGTaGGTTCAAAAATGCCATCCAGGAGGCAAGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CLQRSGLPSGPG*VQKCHPGGKAF Trigger: AAAGGCCTTGCCTCCTGGATGGCATTTTTGAACCCACCCTGGGCCAGAGGGGAGCCCACTTCTTTGAAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS CAA 72 bp | TGGGTCAGATCCAAAGCCAGCACGGCACCGGGTTTCTaGCCTAAGGTCCATGGTGACCACTCCTTGGCTATT | + |
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Preference number: 6 (lower is better) Translates to: WVRSKASTAPGF*PKVHGDHSLAI Trigger: AATAGCCAAGGAGTGGTCACCATGGACCTTAGGCAAGAAACCCGGTGCCGTGCTGGCTTTGGATCTGACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658274.1 ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS TCA 72 bp | ACAGTTACAACTGCCTCAAACTTGACCCCAAAGTATTaGAAGCTCCTCAGAGAGCGGGCCAGCAGCGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: TVTTASNLTPKY*KLLRERASSAA Trigger: CGCAGCGCTGCTGGCCCGCTCTCTGAGGAGCTTTCAATACTTTGGGGTCAAGTTTGAGGCAGTTGTAACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654859.1 ENST00000668290.1 ENST00000670257.1 |
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| CDS CAA 72 bp | GCTGGTATCAGGCCCCTGGCTTTGTTCTCTGTCCCCTaGAGGTTAGGGATCTACTGTACTGTAGAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AGIRPLALFSVP*RLGIYCTVEAE Trigger: CTCAGCCTCTACAGTACAGTAGATCCCTAACCTCAAGGGGACAGAGAACAAAGCCAGGGGCCTGATACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS TCA 72 bp | CATTTCGGGACTGAGAGCCATCCCTTTGAAAGATGTTaGGCTGGAAGAGGAGCGATGTCTGTGGCTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: HFGTESHPFERC*AGRGAMSVAVG Trigger: TCCCACAGCCACAGACATCGCTCCTCTTCCAGCTCAACATCTTTCAAAGGGATGGCTCTCAGTCCCGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS CAA 72 bp | TACAGTTACAACTGCCTCAAACTTGACCCCAAAGTATaGAAAGCTCCTCAGAGAGCGGGCCAGCAGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: YSYNCLKLDPKV*KAPQRAGQQRC Trigger: GCAGCGCTGCTGGCCCGCTCTCTGAGGAGCTTTCAATACTTTGGGGTCAAGTTTGAGGCAGTTGTAACTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654859.1 ENST00000668290.1 ENST00000670257.1 |
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| CDS CAA 90 bp | AGATTATGCTGGGTCAGATCCAAAGCCAGCACGGCACCGGGTTTCTaGCCTAAGGTCCATGGTGACCACTCCTTGGCTATTGCCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: RLCWVRSKASTAPGF*PKVHGDHSLAIANV Trigger: AACATTGGCAATAGCCAAGGAGTGGTCACCATGGACCTTAGGCAAGAAACCCGGTGCCGTGCTGGCTTTGGATCTGACCCAGCATAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658274.1 ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS CAA 90 bp | AGCCAAAGTGCTTCATTGAGTGATGGTAGTGGGATCTGTGATCATTaGCAACTACCACCAACAGCAGCAGCATGGCAGGGTGCACCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SQSASLSDGSGICDH*QLPPTAAAWQGAPL Trigger: CAAGGGTGCACCCTGCCATGCTGCTGCTGTTGGTGGTAGTTGCAAATGATCACAGATCCCACTACCATCACTCAATGAAGCACTTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS GCA 72 bp | GGCCCAATGGCTGCTCAGTCAGCTTATGGTAAATGTTaGCAGTCCTGTGTTTCTGTCTTCAAAGAAGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GPMAAQSAYGKC*QSCVSVFKEVG Trigger: GCCCACTTCTTTGAAGACAGAAACACAGGACTGGCAACATTTACCATAAGCTGACTGAGCAGCCATTGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658274.1 ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS CAA 72 bp | GCTTCATTGAGTGATGGTAGTGGGATCTGTGATCATTaGCAACTACCACCAACAGCAGCAGCATGGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: ASLSDGSGICDH*QLPPTAAAWQG Trigger: ACCCTGCCATGCTGCTGCTGTTGGTGGTAGTTGCAAATGATCACAGATCCCACTACCATCACTCAATGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS CAA 90 bp | ACTGGTCACAACATTCTGCTGGGTGGTGCCAGCCAAAGTGCTTCATaGAGTGATGGTAGTGGGATCTGTGATCATTTGCAACTACCACCA | + |
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Preference number: 6 (lower is better) Translates to: TGHNILLGGASQSAS*SDGSGICDHLQLPP Trigger: TGGTGGTAGTTGCAAATGATCACAGATCCCACTACCATCACTCAATGAAGCACTTTGGCTGGCACCACCCAGCAGAATGTTGTGACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657470.1 |
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| CDS GCA 72 bp | CTTCCCTCACCTTGGGTCCTCCCACTTCTGCAATCCTaGTGTCAACTTCACTCAATTCTTTTCAGGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: LPSPWVLPLLQS*CQLHSILFREM Trigger: CATTTCCCTGAAAAGAATTGAGTGAAGTTGACAGCAGGATTGCAGAAGTGGGAGGACCCAAGGTGAGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655283.1 |
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| CDS CCA 72 bp | GAGAAAGAAAATTACATGCTAGCAGTGAGATTATGCTaGGTCAGATCCAAAGCCAGCACGGCACCGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: EKENYMLAVRLC*VRSKASTAPGF Trigger: GAAACCCGGTGCCGTGCTGGCTTTGGATCTGACCCAGCATAATCTCACTGCTAGCATGTAATTTTCTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000669535.1 ENST00000670576.1 |
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| CDS CAA 90 bp | AATGACAAACAGATAGCAGAAATTCCCAACCATGCTTCCCTCACCTaGGGTCCTCCCACTTCTGCAATCCTGCTGTCAACTTCACTCAAT | + |
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Preference number: 6 (lower is better) Translates to: NDKQIAEIPNHASLT*GPPTSAILLSTSLN Trigger: ATTGAGTGAAGTTGACAGCAGGATTGCAGAAGTGGGAGGACCCAAGGTGAGGGAAGCATGGTTGGGAATTTCTGCTATCTGTTTGTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655283.1 |
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| CDS CCA 72 bp | AATGTTCACTCAAGGCCCAAGCACTCTTTATTCAGCTaGTGGCAAATCCAGCCAGGCTTGTGTTTTTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: NVHSRPKHSLFS*WQIQPGLCFSL Trigger: AAGGGAAAAACACAAGCCTGGCTGGATTTGCCACCAGCTGAATAAAGAGTGCTTGGGCCTTGAGTGAACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000658274.1 ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS CCA 72 bp | AAATGGACAAGAAGTAAAATACCAGTGAGATTATGCTaGGTCAGATCCAAAGCCAGCACGGCACCGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: KWTRSKIPVRLC*VRSKASTAPGF Trigger: GAAACCCGGTGCCGTGCTGGCTTTGGATCTGACCCAGCATAATCTCACTGGTATTTTACTTCTTGTCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658274.1 ENST00000670257.1 |
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| CDS CAA 72 bp | CCTTTTCTTTTCATTTCGGGACTGAGAGCCATCCCTTaGAAAGATGTTGAGCTGGAAGAGGAGCGATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PFLFISGLRAIP*KDVELEEERCL Trigger: CAGACATCGCTCCTCTTCCAGCTCAACATCTTTCAAAGGGATGGCTCTCAGTCCCGAAATGAAAAGAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS CAA 72 bp | AGCCAGGACCTGGAATCAGGATCCTTAGGAATTTACTaGGTGCTGTATTCTACTATGGCTGAGCTGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: SQDLESGSLGIY*VLYSTMAELAI Trigger: GATTGCCAGCTCAGCCATAGTAGAATACAGCACCAAGTAAATTCCTAAGGATCCTGATTCCAGGTCCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658274.1 ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS CAA 90 bp | CCCTGGACTACCTCGACAGCTCACTATGTCAGAAGGACACAGGCTTaGGTATTTCTTTTGCTGATAAAGAGAATGATTTGCACCAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PWTTSTAHYVRRTQA*VFLLLIKRMICTKP Trigger: TGGCTTGGTGCAAATCATTCTCTTTATCAGCAAAAGAAATACCAAAGCCTGTGTCCTTCTGACATAGTGAGCTGTCGAGGTAGTCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS TCA 72 bp | TTTGGCTGCATTGGCAAATGTCCTGTTTTAGCCAGCTaGACAAGCTTCTGGAAGGAAGTTTGCACCCATAGA | + |
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Preference number: 6 (lower is better) Translates to: FGCIGKCPVLAS*TSFWKEVCTHR Trigger: TCTATGGGTGCAAACTTCCTTCCAGAAGCTTGTTCAGCTGGCTAAAACAGGACATTTGCCAATGCAGCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS CCA 72 bp | GAGGTAGCCAGTATAAGACCCAACTTTTGGCTGCATTaGCAAATGTCCTGTTTTAGCCAGCTGAACAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: EVASIRPNFWLH*QMSCFSQLNKL Trigger: AAGCTTGTTCAGCTGGCTAAAACAGGACATTTGCCAATGCAGCCAAAAGTTGGGTCTTATACTGGCTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS TCA 72 bp | AGTTTGCAGGAAGATGCGGCATTGGAGAAAGAAGAATaGGGAGGCTGGCACAATGGAAGAACATCTACATTT | + |
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Preference number: 6 (lower is better) Translates to: SLQEDAALEKEE*GGWHNGRTSTF Trigger: AAATGTAGATGTTCTTCCATTGTGCCAGCCTCCTCATTCTTCTTTCTCCAATGCCGCATCTTCCTGCAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS CAA 72 bp | CACTATGTCAGAAGGACACAGGCTTTGGTATTTCTTTaGCTGATAAAGAGAATGATTTGCACCAAGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: HYVRRTQALVFL*LIKRMICTKPP Trigger: AGGTGGCTTGGTGCAAATCATTCTCTTTATCAGCAAAAGAAATACCAAAGCCTGTGTCCTTCTGACATAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS CAA 72 bp | ACCTCGACAGCTCACTATGTCAGAAGGACACAGGCTTaGGTATTTCTTTTGCTGATAAAGAGAATGATTTGC | + |
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Preference number: 6 (lower is better) Translates to: TSTAHYVRRTQA*VFLLLIKRMIC Trigger: GCAAATCATTCTCTTTATCAGCAAAAGAAATACCAAAGCCTGTGTCCTTCTGACATAGTGAGCTGTCGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654859.1 ENST00000661230.1 ENST00000668290.1 ENST00000669535.1 ENST00000670576.1 |
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| CDS GCA 72 bp | GTGCTGTATTCTACTATGGCTGAGCTGGCAATCAAGTaGAAGATTAAGCCCTTTATTTTCTTTGTTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLYSTMAELAIK*KIKPFIFFVLL Trigger: AAGGAGAACAAAGAAAATAAAGGGCTTAATCTTGCACTTGATTGCCAGCTCAGCCATAGTAGAATACAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658274.1 ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS CCA 72 bp | GAATTTACTTGGTGCTGTATTCTACTATGGCTGAGCTaGCAATCAAGTGCAAGATTAAGCCCTTTATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EFTWCCILLWLS*QSSARLSPLFS Trigger: AGAAAATAAAGGGCTTAATCTTGCACTTGATTGCCAGCTCAGCCATAGTAGAATACAGCACCAAGTAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658274.1 ENST00000669535.1 ENST00000670257.1 ENST00000670576.1 |
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| CDS TCA 72 bp | AAGAAAGTTTCTTCCTCTGTAACAGGAATCCCTAGTTaGTCATTTTGGGCTGTTTCCAACTTTACACATTGT | + |
|
Preference number: 6 (lower is better) Translates to: KKVSSSVTGIPS*SFWAVSNFTHC Trigger: ACAATGTGTAAAGTTGGAAACAGCCCAAAATGATCAACTAGGGATTCCTGTTACAGAGGAAGAAACTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655283.1 ENST00000657470.1 |
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| CDS CCA 72 bp | TTAGGTCATTCTCGTATTTTGGGGAAACTAGAAACCTaGCTGCCTTATACAAGCAGTGATTCATTAATACTA | + |
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Preference number: 6 (lower is better) Translates to: LGHSRILGKLET*LPYTSSDSLIL Trigger: TAGTATTAATGAATCACTGCTTGTATAAGGCAGCCAGGTTTCTAGTTTCCCCAAAATACGAGAATGACCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655283.1 ENST00000657470.1 |
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