Pregenerated sensors for LYPD8 (Homo sapiens)
Ensembl gene IDs: ENSG00000259823Ensembl transcript IDs: ENST00000590317.4
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTaGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCAGCACC | + |
|
Preference number: 1 (lower is better) Translates to: KAAVGIAWRPVTPTY*AVKRGRAGKEGVST Trigger: GGTGCTGACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| 3UTR CCA 90 bp | ACCAGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTaGAGACCTGTGACTCCCACTTACTGGGCAGTTAAACGGGGCAGA | + |
|
Preference number: 1 (lower is better) Translates to: TSALIMKNKAAVGIA*RPVTPTYWAVKRGR Trigger: TCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTGCAGAAATGGGGTGCTaGGCAAAGTGCAGCCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: QGSCRHCLETCDSHLLGSAEMGC*AKCSPR Trigger: CCTGGGGCTGCACTTTGCCCAGCACCCCATTTCTGC...ACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGACCTGTGACTCCCACTTACTGGGCAGTTAAACGGGGCAGAGCAGGGAAACAGCACCGCAGGGGGTaGTCTGGACCTCAGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: WRPVTPTYWAVKRGRAGKQHRRG*SGPQRS Trigger: GCTTCTCTGAGGTCCAGAGCACCCCCTGCGGTGCTG...TTTCCCTGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCATCAGAGAAGCAGAAATaGGGTGCTGGGCAAAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: NKAAVGIAWRPVTPTYWASEKQK*GAGQSA Trigger: TGCACTTTGCCCAGCACCCCATTTCTGCTTCTCTGA...TGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| 3UTR CCA 72 bp | GTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTaGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VGIAWRPVTPTY*AVKRGRAGKEG Trigger: ACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| 3UTR TCA 72 bp | AGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTaGCTCCCACTTACTGGGCAGTTAAACGGGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RTRQLSALPGDL*LPLTGQLNGAE Trigger: CTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| 3UTR GCA 72 bp | TGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTaGCTGGAGACCTGTGACTCCCACTTACTGGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CFNNEEQGSCRH*LETCDSHLLGS Trigger: ACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| 3UTR CCA 72 bp | TTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTaGAGACCTGTGACTCCCACTTACTGGGCAGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LIMKNKAAVGIA*RPVTPTYWAVK Trigger: TTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCAGCACCGCAGGGGCAGCACCGCAGGGGGTaGTCTGGACCTCAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGQLNGAEQGKRVSAPQGQHRRG*SGPQRS Trigger: GCTTCTCTGAGGTCCAGAGCACCCCCTGCGGTGCTG...CCCCTGCGGTGCTGACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | TGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCAGCACCGCAGGGGGTCCACGTTGTGGGAAGTaGTTGGTGCAGACGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WAVKRGRAGKEGVSTAGGPRCGK*LVQTWG Trigger: CCCCCACGTCTGCACCAACCACTTCCCACAACGTGG...ACCCCCTGCGGTGCTGACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTGGGTGCTGGGCAAAGTaGAGCCCCAGGACCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAAVGIAWRPVTPTYWAVGCWAK*SPRTSG Trigger: CCCTGAGGTCCTGGGGCTGCACTTTGCCCAGCACCC...AACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | ACTGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCAGCACCGCAGGGGTTGGAGCCCACGTTGTaGGAAGTGGTTGGTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TGQLNGAEQGKRVSAPQGLEPTL*EVVGAD Trigger: GTCTGCACCAACCACTTCCCACAACGTGGGCTCCAA...CCCCTGCGGTGCTGACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | ACTGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCAGCACCGCAGGGGGCTGGTGTTGGCATGTaGGGGACATTCAGAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGQLNGAEQGKRVSAPQGAGVGM*GTFRGN Trigger: ATTGCCTCTGAATGTCCCTCACATGCCAACACCAGC...CCCCTGCGGTGCTGACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTTGCCTGGAGACCTGTaGCTCCCACTTACTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSCRHCLETCDSHLLGSLPGDL*LPLTGQ Trigger: CTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAA...ACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTCCCGAAGAAGGAGGCTaGCAAGGGCCAAGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGSCRHCLETCDSHLLGSPEEGG*QGPRGR Trigger: TCTACCTCTTGGCCCTTGCCAGCCTCCTTCTTCGGG...ACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | GAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCGGGCATCGCTGGTGTTaGTGCATTCCTTTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQGSCRHCLETCDSHLLGGHRWC*CIPFLG Trigger: GCCAAGGAAAGGAATGCAGCAACACCAGCGATGCCC...GCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | GTGACTCCCACTTACTGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCCAGGGCACTCTGCGTTaGTGGACACGTTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTPTYWAVKRGRAGKEGVQGTLR*WTRSSG Trigger: CCCTGAAGAACGTGTCCAGCAACGCAGAGTGCCCTG...GACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTAAAGGCAGCTGTCGGCATTaGCTGGAGACCTGTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAVGIAWRPVTPTYWAVKGSCRH*LETCDS Trigger: GGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCC...TTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTGGCACTCTGCGTTGCTaGACACGTTCTTCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAAVGIAWRPVTPTYWAVGTLRC*TRSSGE Trigger: CTCCCCTGAAGAACGTGTCCAGCAACGCAGAGTGCC...AACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | AACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGCTGTCGGCATTGCCTaGAGACCTGTGACTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NKAAVGIAWRPVTPTYWAAVGIA*RPVTPT Trigger: AGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGC...TGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTAAACTGGATCTGGCCTGGTaGCTGTCCTACAGAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAVGIAWRPVTPTYWAVKLDLAW*LSYRRW Trigger: CCACCTTCTGTAGGACAGTCACCAGGCCAGATCCAG...TTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | TGGAGACCTGTGACTCCCACTTACTGGGCAGTTAAACGGGGCAGAGCAGGGAAATCATGGTGCTGGAGCTaGCTTCTCCCAAGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRPVTPTYWAVKRGRAGKSWCWS*LLPRMG Trigger: CCCCATCCTTGGGAGAAGTCAGCTCCAGCACCATGA...TTTCCCTGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTGACAGGTGGCGTTACTaGCGTTGGAACAGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KAAVGIAWRPVTPTYWAVDRWRY*RWNSLS Trigger: TGAAAGGCTGTTCCAACGTCAGTAACGCCACCTGTC...AACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | ATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTAAACGGGGCAGAGCATCACCAGACAGGAACTaGCAGGTGGCGTTACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: IAWRPVTPTYWAVKRGRASPDRN*QVALLT Trigger: CGTCAGTAACGCCACCTGTCAGTTCCTGTCTGGTGA...TGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCAGCACCGCAGGGGGGGTCCTGCTATAATTaGTGTCATCTTCCACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGQLNGAEQGKRVSAPQGGSCYN*CHLPQR Trigger: TCTCTGTGGAAGATGACAGCAATTATAGCAGGACCC...CCCCTGCGGTGCTGACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGT 56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTTGTGTGTCTCCTCACTaGAGTTCTCCGCTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAAVGIAWRPVTPTYWAVCVSPH*SSPLSR Trigger: TCTGCTCAGCGGAGAACTGCAGTGAGGAGACACACA...AACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | GTGACTCCCACTTACTGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCACAAGCAGGGCACTCTaGGTTGCTGGACACGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTPTYWAVKRGRAGKEGVTSRAL*VAGHVL Trigger: AAGAACGTGTCCAGCAACGCAGAGTGCCCTGCTTGT...GACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | ATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTAAACGGGGCAGAGCAGGTAGAGGGAAGCTTTaGAGCCCACGTTGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IAWRPVTPTYWAVKRGRAGRGKL*SPRCGK Trigger: CTTCCCACAACGTGGGCTCCAAAGCTTCCCTCTACC...TGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTCAGAGAAGCAGAAATaGGGTGCTGGGCAAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSCRHCLETCDSHLLGSSEKQK*GAGQSA Trigger: TGCACTTTGCCCAGCACCCCATTTCTGCTTCTCTGA...ACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTGGACATGAGAAGAAGTaGCATCTTAGGCCGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGSCRHCLETCDSHLLGSGHEKK*HLRPFH Trigger: GTGAAACGGCCTAAGATGCCACTTCTTCTCATGTCC...ACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTGGTTGGTGCAGACGTaGGGGTTAAGCTGTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGSCRHCLETCDSHLLGSWLVQT*GLSCLH Trigger: ATGTAAACAGCTTAACCCCCACGTCTGCACCAACCA...ACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | GAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCCAGAGATTCTACAGCTaGAACAAGCACTGCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQGSCRHCLETCDSHLLGQRFYS*NKHCSD Trigger: ATCACTGCAGTGCTTGTTGCAGCTGTAGAATCTCTG...GCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | AACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAACAGGATTTTTCCCATaGATTACACTGCACGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKAAVGIAWRPVTPTYWATGFFP*ITLHAA Trigger: AGCTGCGTGCAGTGTAATTCATGGGAAAAATCCTGT...TGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | GTGACTCCCACTTACTGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCTCCCATGAATTACACTaGACGCAGCTCAGAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTPTYWAVKRGRAGKEGVSHELH*TQLRDS Trigger: AGAATCTCTGAGCTGCGTGCAGTGTAATTCATGGGA...GACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACGACTTCTCCCAAGGATaGGGACCACAGGGCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CFNNEEQGSCRHCLETCDDFSQG*GPQGLK Trigger: CTTGAGGCCCTGTGGTCCCCATCCTTGGGAGAAGTC...GTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | ATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTAAACGGGGCAGAGCAATCTTTTCGACAGCCTaGCAGGGTCCTGCTATAATT | + |
|
Preference number: 4 (lower is better) Translates to: IAWRPVTPTYWAVKRGRAIFSTA*QGPAII Trigger: AATTATAGCAGGACCCTGCCAGGCTGTCGAAAAGAT...TGCTCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACAGGGCCTCAAGCCTaGGACATGAGAAGAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SALIMKNKAAVGIAWRPVTGPQA*DMRRSG Trigger: GCCACTTCTTCTCATGTCCCAGGCTTGAGGCCCTGT...CACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACGGTCCAGGGCATCGCTaGTGTTGCTGCATTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFNNEEQGSCRHCLETCDGPGHR*CCCIPF Trigger: GAAAGGAATGCAGCAACACCAGCGATGCCCTGGACC...GTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | AGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGCAACAAGCACTGCAGTaGTACCAGCAACGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SALIMKNKAAVGIAWRPVQQALQ*YQQRGC Trigger: GCATCCTCGTTGCTGGTATCACTGCAGTGCTTGTTG...CACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGAGAGGCTTCTGGATCTaGCCTGGTGACTGTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SALIMKNKAAVGIAWRPVRGFWI*PGDCPT Trigger: TGTAGGACAGTCACCAGGCCAGATCCAGAAGCCTCT...CACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | ATGAACCAGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGCATCGCTGGTGTTGCTaGATTCCTTTCCTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MNQCFNNEEQGSCRHCLEHRWCC*IPFLGS Trigger: GCTGCCAAGGAAAGGAATGCAGCAACACCAGCGATG...CTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACTGGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGTTCCACAGAGAAAGCTaGAGCCTAGAGAGGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SALIMKNKAAVGIAWRPVFHRES*SLERLL Trigger: CAGAAGCCTCTCTAGGCTCCAGCTTTCTCTGTGGAA...CACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | ATGAACCAGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGGTGACTCCCACTTACTaGGCAGTTAAACGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MNQCFNNEEQGSCRHCLEVTPTY*AVKRGR Trigger: TCTGCCCCGTTTAACTGCCCAGTAAGTGGGAGTCAC...CTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACTGGTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | TGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACACTGCAGTTCTCCGCTaGGCAGAACATATTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CFNNEEQGSCRHCLETCDTAVLR*AEHILV Trigger: TACCAGAATATGTTCTGCTCAGCGGAGAACTGCAGT...GTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | AGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGTTCCAGGGCTTCCCATaGCAGGAAGTTCCATTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SALIMKNKAAVGIAWRPVFQGFP*QEVPLD Trigger: ATCTAATGGAACTTCCTGTCATGGGAAGCCCTGGAA...CACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGTCTTCAGCAGACACGTaGACAGTGAAGGCTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SALIMKNKAAVGIAWRPVSSADT*TVKAVM Trigger: CATTACAGCCTTCACTGTCCACGTGTCTGCTGAAGA...CACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR TCA 90 bp | ATGAACCAGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGCAGAGGCAATGCTGTTaGCACAGGATTTTTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: MNQCFNNEEQGSCRHCLEQRQCC*HRIFPM Trigger: CATGGGAAAAATCCTGTGTCAACAGCATTGCCTCTG...CTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACTGGTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR GCA 90 bp | AGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGCTGGCAAAGTTTTATTaGGGAATCTTTTCGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SALIMKNKAAVGIAWRPVLAKFY*GIFSTA Trigger: GGCTGTCGAAAAGATTCCGCAATAAAACTTTGCCAG...CACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACCTAGGTACTTCCCACTaGCAAAGTTTTATTGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFNNEEQGSCRHCLETCDLGTSH*QSFIAE Trigger: TTCCGCAATAAAACTTTGCCAGTGGGAAGTACCTAG...GTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGGAGCAGAACATATTCTaGTATAATCTGACTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SALIMKNKAAVGIAWRPVEQNIF*YNLTGV Trigger: GACACCAGTCAGATTATACCAGAATATGTTCTGCTC...CACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CAA 90 bp | ACTGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCAGCACCGCAGGGGGCTGCATTCCTTTCCTaGGCAGCACTGGCTTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: TGQLNGAEQGKRVSAPQGAAFLS*AALAYK Trigger: TTTGTAAGCCAGTGCTGCCAAGGAAAGGAATGCAGC...CCCCTGCGGTGCTGACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CAA 90 bp | GAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGGGCATCGCTGGTGTaGCTGCATTCCTTTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EQGSCRHCLETCDSHLLGRASLV*LHSFPW Trigger: CCAAGGAAAGGAATGCAGCAACACCAGCGATGCCCT...GCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTGTGGCGTTACTGACGTaGGAACAGCCTTTCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: QGSCRHCLETCDSHLLGSVALLT*EQPFST Trigger: CGTGCTGAAAGGCTGTTCCAACGTCAGTAACGCCAC...ACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTAAAGCTTTGGAGCCCACGTaGTGGGAAGTGGTTGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAVGIAWRPVTPTYWAVKALEPT*WEVVGA Trigger: TGCACCAACCACTTCCCACAACGTGGGCTCCAAAGC...TTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CAA 90 bp | TGGGCAGTTAAACGGGGCAGAGCAGGGAAAGAGGGTGTCAGCACCGCAGGGGGTTCAGAGGCAATGCTGTaGACACAGGATTTTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WAVKRGRAGKEGVSTAGGSEAML*TQDFSH Trigger: ATGGGAAAAATCCTGTGTCAACAGCATTGCCTCTGA...ACCCCCTGCGGTGCTGACACCCTCTTTCCCTGCTCTGCCCCGTTTAACTGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS GCA 90 bp | CCCATGACAGGAAGTTCCATTAGATTCATAACAAGCAGGGCACTCTaGGTTGCTGGACACGTTCTTCAGGGGAGGGTCCAGGGCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PMTGSSIRFITSRAL*VAGHVLQGRVQGIA Trigger: AGCGATGCCCTGGACCCTCCCCTGAAGAACGTGTCCAGCAACGCAGAGTGCCCTGCTTGTTATGAATCTAATGGAACTTCCTGTCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CCA 90 bp | GGGCCAAGAGGTAGAGGGAAGCTTTGGAGCCCACGTTGTGGGAAGTaGTTGGTGCAGACGTGGGGGTTAAGCTGTTTACATTTGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: GPRGRGKLWSPRCGK*LVQTWGLSCLHLHT Trigger: AGTGTGCAAATGTAAACAGCTTAACCCCCACGTCTGCACCAACCACTTCCCACAACGTGGGCTCCAAAGCTTCCCTCTACCTCTTGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CAA 90 bp | GAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCACTCCTCCAAGAGTCTaGTTTTCACCAGACAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EQGSCRHCLETCDSHLLGTPPRV*FSPDRN Trigger: GTTCCTGTCTGGTGAAAACAAGACTCTTGGAGGAGT...GCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGTCGGCATTGCCTGGAGACCTGTGACTCCCACTTACTGGGCAGTTAAACTGATACAGCTGGTGTaGGCATGTGAGGGACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAVGIAWRPVTPTYWAVKLIQLV*ACEGHS Trigger: TGAATGTCCCTCACATGCCAACACCAGCTGTATCAG...TTTAACTGCCCAGTAAGTGGGAGTCACAGGTCTCCAGGCAATGCCGACAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGACCTGTGACGCAGGGCACTCTGCGTaGCTGGACACGTTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CFNNEEQGSCRHCLETCDAGHSA*LDTFFR Trigger: CCTGAAGAACGTGTCCAGCAACGCAGAGTGCCCTGC...GTCACAGGTCTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS-3UTR CAA 90 bp | ATGAACCAGTGCTTTAATAATGAAGAACAAGGCAGCTGTCGGCATTGCCTGGAGCGTTGTGGGAAGTGGTaGGTGCAGACGTGGGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: MNQCFNNEEQGSCRHCLERCGKW*VQTWGL Trigger: TAACCCCCACGTCTGCACCAACCACTTCCCACAACG...CTCCAGGCAATGCCGACAGCTGCCTTGTTCTTCATTATTAAAGCACTGGTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CCA 90 bp | GGGAAGCTTTGGAGCCCACGTTGTGGGAAGTGGTTGGTGCAGACGTaGGGGTTAAGCTGTTTACATTTGCACACTCAAACTTTCGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GKLWSPRCGKWLVQT*GLSCLHLHTQTFER Trigger: TCTTTCGAAAGTTTGAGTGTGCAAATGTAAACAGCTTAACCCCCACGTCTGCACCAACCACTTCCCACAACGTGGGCTCCAAAGCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS GCA 90 bp | ATCTTAGGCCGTTTCACTAGGTACTTCCCACTGGCAAAGTTTTATTaGGGAATCTTTTCGACAGCCTGGCAGGGTCCTGCTATAATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILGRFTRYFPLAKFY*GIFSTAWQGPAIIA Trigger: AGCAATTATAGCAGGACCCTGCCAGGCTGTCGAAAAGATTCCGCAATAAAACTTTGCCAGTGGGAAGTACCTAGTGAAACGGCCTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CCA 90 bp | TACTTCCCACTGGCAAAGTTTTATTGCGGAATCTTTTCGACAGCCTaGCAGGGTCCTGCTATAATTGCTGTCATCTTCCACAGAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YFPLAKFYCGIFSTA*QGPAIIAVIFHRES Trigger: GCTTTCTCTGTGGAAGATGACAGCAATTATAGCAGGACCCTGCCAGGCTGTCGAAAAGATTCCGCAATAAAACTTTGCCAGTGGGAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS TCA 90 bp | TGGGGGTTAAGCTGTTTACATTTGCACACTCAAACTTTCGAAAGATaGCTCCTCCAAGAGTCTTGTTTTCACCAGACAGGAACTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGLSCLHLHTQTFER*LLQESCFHQTGTDR Trigger: CCTGTCAGTTCCTGTCTGGTGAAAACAAGACTCTTGGAGGAGTCATCTTTCGAAAGTTTGAGTGTGCAAATGTAAACAGCTTAACCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS TCA 72 bp | TACCAGCAACGAGGATGCCCTTCATGGTGCTGGAGCTaGCTTCTCCCAAGGATGGGGACCACAGGGCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: YQQRGCPSWCWS*LLPRMGTTGPQ Trigger: TTGAGGCCCTGTGGTCCCCATCCTTGGGAGAAGTCAGCTCCAGCACCATGAAGGGCATCCTCGTTGCTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS GCA 72 bp | TCTTCAGGGGAGGGTCCAGGGCATCGCTGGTGTTGCTaGATTCCTTTCCTTGGCAGCACTGGCTTACAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSGEGPGHRWCC*IPFLGSTGLQN Trigger: ATTTTGTAAGCCAGTGCTGCCAAGGAAAGGAATGCAGCAACACCAGCGATGCCCTGGACCCTCCCCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CCA 72 bp | GGTAGAGGGAAGCTTTGGAGCCCACGTTGTGGGAAGTaGTTGGTGCAGACGTGGGGGTTAAGCTGTTTACAT | + |
|
Preference number: 6 (lower is better) Translates to: GRGKLWSPRCGK*LVQTWGLSCLH Trigger: ATGTAAACAGCTTAACCCCCACGTCTGCACCAACCACTTCCCACAACGTGGGCTCCAAAGCTTCCCTCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CAA 90 bp | CAGGGGAGGGTCCAGGGCATCGCTGGTGTTGCTGCATTCCTTTCCTaGGCAGCACTGGCTTACAAAATGAAAGTGTTCTTCAGCAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: QGRVQGIAGVAAFLS*AALAYKMKVFFSRH Trigger: GTGTCTGCTGAAGAACACTTTCATTTTGTAAGCCAGTGCTGCCAAGGAAAGGAATGCAGCAACACCAGCGATGCCCTGGACCCTCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS TCA 72 bp | AGCTCAGAGATTCTACAGCTGCAACAAGCACTGCAGTaGTACCAGCAACGAGGATGCCCTTCATGGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSEILQLQQALQ*YQQRGCPSWCW Trigger: CCAGCACCATGAAGGGCATCCTCGTTGCTGGTATCACTGCAGTGCTTGTTGCAGCTGTAGAATCTCTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS GCA 72 bp | GGAAGTTCCATTAGATTCATAACAAGCAGGGCACTCTaGGTTGCTGGACACGTTCTTCAGGGGAGGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSSIRFITSRAL*VAGHVLQGRVQ Trigger: CTGGACCCTCCCCTGAAGAACGTGTCCAGCAACGCAGAGTGCCCTGCTTGTTATGAATCTAATGGAACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CAA 72 bp | AGAGGGAAGCTTTGGAGCCCACGTTGTGGGAAGTGGTaGGTGCAGACGTGGGGGTTAAGCTGTTTACATTTG | + |
|
Preference number: 6 (lower is better) Translates to: RGKLWSPRCGKW*VQTWGLSCLHL Trigger: CAAATGTAAACAGCTTAACCCCCACGTCTGCACCAACCACTTCCCACAACGTGGGCTCCAAAGCTTCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CAA 90 bp | CCAAGAGGTAGAGGGAAGCTTTGGAGCCCACGTTGTGGGAAGTGGTaGGTGCAGACGTGGGGGTTAAGCTGTTTACATTTGCACACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PRGRGKLWSPRCGKW*VQTWGLSCLHLHTQ Trigger: TTGAGTGTGCAAATGTAAACAGCTTAACCCCCACGTCTGCACCAACCACTTCCCACAACGTGGGCTCCAAAGCTTCCCTCTACCTCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CCA 72 bp | TGGAGCCCACGTTGTGGGAAGTGGTTGGTGCAGACGTaGGGGTTAAGCTGTTTACATTTGCACACTCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: WSPRCGKWLVQT*GLSCLHLHTQT Trigger: AGTTTGAGTGTGCAAATGTAAACAGCTTAACCCCCACGTCTGCACCAACCACTTCCCACAACGTGGGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS TCA 72 bp | ACTCCTCCAAGAGTCTTGTTTTCACCAGACAGGAACTaGCAGGTGGCGTTACTGACGTTGGAACAGCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TPPRVLFSPDRN*QVALLTLEQPF Trigger: GAAAGGCTGTTCCAACGTCAGTAACGCCACCTGTCAGTTCCTGTCTGGTGAAAACAAGACTCTTGGAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS GCA 72 bp | CGTTTCACTAGGTACTTCCCACTGGCAAAGTTTTATTaGGGAATCTTTTCGACAGCCTGGCAGGGTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RFTRYFPLAKFY*GIFSTAWQGPA Trigger: AGCAGGACCCTGCCAGGCTGTCGAAAAGATTCCGCAATAAAACTTTGCCAGTGGGAAGTACCTAGTGAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS TCA 72 bp | TGTTGGCATGTGAGGGACATTCAGAGGCAATGCTGTTaGCACAGGATTTTTCCCATGAATTACACTGCACGC | + |
|
Preference number: 6 (lower is better) Translates to: CWHVRDIQRQCC*HRIFPMNYTAR Trigger: GCGTGCAGTGTAATTCATGGGAAAAATCCTGTGTCAACAGCATTGCCTCTGAATGTCCCTCACATGCCAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS GCA 72 bp | TTATTGCGGAATCTTTTCGACAGCCTGGCAGGGTCCTaGTATAATTGCTGTCATCTTCCACAGAGAAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLRNLFDSLAGS*YNCCHLPQRKL Trigger: CAGCTTTCTCTGTGGAAGATGACAGCAATTATAGCAGGACCCTGCCAGGCTGTCGAAAAGATTCCGCAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CCA 72 bp | CTGGCAAAGTTTTATTGCGGAATCTTTTCGACAGCCTaGCAGGGTCCTGCTATAATTGCTGTCATCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAKFYCGIFSTA*QGPAIIAVIFH Trigger: GTGGAAGATGACAGCAATTATAGCAGGACCCTGCCAGGCTGTCGAAAAGATTCCGCAATAAAACTTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS CAA 72 bp | GTGTTGGCATGTGAGGGACATTCAGAGGCAATGCTGTaGACACAGGATTTTTCCCATGAATTACACTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: VLACEGHSEAML*TQDFSHELHCT Trigger: CGTGCAGTGTAATTCATGGGAAAAATCCTGTGTCAACAGCATTGCCTCTGAATGTCCCTCACATGCCAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||
| CDS TCA 72 bp | AGCTGTTTACATTTGCACACTCAAACTTTCGAAAGATaGCTCCTCCAAGAGTCTTGTTTTCACCAGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SCLHLHTQTFER*LLQESCFHQTG Trigger: TCCTGTCTGGTGAAAACAAGACTCTTGGAGGAGTCATCTTTCGAAAGTTTGAGTGTGCAAATGTAAACAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590317.4 |
||