RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYPD6B (Homo sapiens)

Ensembl gene IDs: ENSG00000150556

Ensembl transcript IDs: ENST00000280115.8, ENST00000409029.5, ENST00000409642.8, ENST00000409876.5, ENST00000437627.5, ENST00000442722.5, ENST00000450639.5, ENST00000473800.1, ENST00000473975.5, ENST00000498249.1

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATaGGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAG +
Preference number: 1 (lower is better)
Translates to: LLRPCQIPILSPVAS*GNILSKQTTGFRLE
Trigger: CTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR CCA 90 bp CAGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTaGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTC +
Preference number: 1 (lower is better)
Translates to: QTIFSGPAKFPSSVL*PHAGTFYPSKPLAF
Trigger: GAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR GCA 90 bp ACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTaGAAGATTGATCTTCACTCCAAAGTTCACCGTTCACACAGTTTT +
Preference number: 1 (lower is better)
Translates to: TTGFRLEVQCALFTK*KIDLHSKVHRSHSF
Trigger: AAAACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR TCA 90 bp GACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCCACTGGCTTTCGCCTTaGGGTCCAATGTGCACTCTT +
Preference number: 2 (lower is better)
Translates to: DHLLRPCQIPILSPVASCHWLSP*GPMCTL
Trigger: AAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTG...GCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CCA 90 bp GACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCTTGTGCTTTAGAGGCTaGTCTCTGCCTCTCCTAGGA +
Preference number: 2 (lower is better)
Translates to: DHLLRPCQIPILSPVASCLCFRG*SLPLLG
Trigger: TCCTAGGAGAGGCAGAGACCAGCCTCTAAAGCACAA...GCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR TCA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTCACTGGCTTTCGCCTTaGGGTCCAATGTGCACTCTT +
Preference number: 2 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLHWLSP*GPMCTL
Trigger: AAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTG...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR GCA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGACAGTTTTTGGCTTGTaGTTTAGAGGCTGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMTVFGL*FRGWSL
Trigger: CAGAGACCAGCCTCTAAAGCACAAGCCAAAAACTGT...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR GCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCAGTCCTGTGGCCTCATaGGGGAACATTTTATCCAAG +
Preference number: 2 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFSPVAS*GNILSK
Trigger: CTTGGATAAAATGTTCCCGCATGAGGCCACAGGACT...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR GCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCTCCTCTCTGCAGAACTaGCCAAACGTAGCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFSSLQN*PNVALF
Trigger: AAAGAGAGCTACGTTTGGGCAGTTCTGCAGAGAGGA...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CCA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTCCATCCTCAGTCCTGTaGCCTCATGCGGGAACATTT +
Preference number: 2 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLPSSVL*PHAGTF
Trigger: AAATGTTCCCGCATGAGGCCACAGGACTGAGGATGG...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCTTTGACCAGGAAGCCTaGAAGTCAGACCATCTTCTC +
Preference number: 2 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFFDQEA*KSDHLL
Trigger: GAGAAGATGGTCTGACTTCCAGGCTTCCTGGTCAAA...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CCA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTTTGTGCTTTAGAGGCTaGTCTCTGCCTCTCCTAGGA +
Preference number: 2 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLLCFRG*SLPLLG
Trigger: TCCTAGGAGAGGCAGAGACCAGCCTCTAAAGCACAA...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR GCA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCACAGTTTTTGGCTTGTaGTTTAGAGGCTGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: ILSPVASCGNILSKQTTGTVFGL*FRGWSL
Trigger: CAGAGACCAGCCTCTAAAGCACAAGCCAAAAACTGT...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR GCA 90 bp CCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTACAGTTTTTGGCTTGTaGTTTAGAGGCTGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: PQSCGLMREHFIQANHWLTVFGL*FRGWSL
Trigger: CAGAGACCAGCCTCTAAAGCACAAGCCAAAAACTGT...AAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CCA 90 bp ACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTTGTGCTTTAGAGGCTaGTCTCTGCCTCTCCTAGGA +
Preference number: 2 (lower is better)
Translates to: TFYPSKPLAFALRSNVHSLCFRG*SLPLLG
Trigger: TCCTAGGAGAGGCAGAGACCAGCCTCTAAAGCACAA...AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CCA 90 bp TTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCATTGTGCTTTAGAGGCTaGTCTCTGCCTCTCCTAGGA +
Preference number: 2 (lower is better)
Translates to: FYPSKPLAFALRSNVHSSLCFRG*SLPLLG
Trigger: TCCTAGGAGAGGCAGAGACCAGCCTCTAAAGCACAA...TGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR CAA 90 bp GCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGATaGATCTTCACTCCAAAGTTCACCGTTCACACAGTTTTTGGCTTG +
Preference number: 2 (lower is better)
Translates to: AFALRSNVHSSPSAR*IFTPKFTVHTVFGL
Trigger: CAAGCCAAAAACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR GCA 90 bp GAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTTGGTGGGGAAAAGTCCTGTGGCCTCATaGGGGAACATTTTATCCAAG +
Preference number: 2 (lower is better)
Translates to: EVFFVQLPFSLTMLLVGKSPVAS*GNILSK
Trigger: CTTGGATAAAATGTTCCCGCATGAGGCCACAGGACT...TTTCCCCACCAACAGCATAGTCAATGAGAAAGGCAACTGTACGAAGAAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR TCA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCCACTGGCTTTCGCCTTaGGGTCCAATGTGCACTCTT +
Preference number: 2 (lower is better)
Translates to: FANRFHISSTGSFLRTVAHWLSP*GPMCTL
Trigger: AAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTG...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR GCA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTCCTCTCTGCAGAACTaGCCAAACGTAGCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: FANRFHISSTGSFLRTVASSLQN*PNVALF
Trigger: AAAGAGAGCTACGTTTGGGCAGTTCTGCAGAGAGGA...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR TCA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTCATAGAGATGCTCTaGGCTAATCACATAAACAAG +
Preference number: 2 (lower is better)
Translates to: FANRFHISSTGSFLRTVAFIEML*ANHINK
Trigger: CTTGTTTATGTGATTAGCTCAGAGCATCTCTATGAA...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CAA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCCCACTGGCTTTCGCCTaGAGGTCCAATGTGCACTCT +
Preference number: 3 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFPLAFA*RSNVHS
Trigger: AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGG...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CAA 90 bp AAGTCAGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCCACACAGTTTTTGGCTaGTGCTTTAGAGGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: KSDHLLRPCQIPILSPVAHTVFG*CFRGWS
Trigger: AGACCAGCCTCTAAAGCACAAGCCAAAAACTGTGTG...GGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCTGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR GCA 72 bp CCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATaGGGGAACATTTTATCCAAGCAAACCACTGGCTTT +
Preference number: 3 (lower is better)
Translates to: PCQIPILSPVAS*GNILSKQTTGF
Trigger: AAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR CCA 72 bp TTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTaGCCTCATGCGGGAACATTTTATCCAAGCAAACCA +
Preference number: 3 (lower is better)
Translates to: FSGPAKFPSSVL*PHAGTFYPSKP
Trigger: TGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR CCA 72 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTaGAAGTCAGACCATCTTCTCAGGCCCTGCCAAATT +
Preference number: 3 (lower is better)
Translates to: NCPNVALFDQEA*KSDHLLRPCQI
Trigger: AATTTGGCAGGGCCTGAGAAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CAA 90 bp CCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTCACACAGTTTTTGGCTaGTGCTTTAGAGGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: PQSCGLMREHFIQANHWLHTVFG*CFRGWS
Trigger: AGACCAGCCTCTAAAGCACAAGCCAAAAACTGTGTG...AAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR TCA 72 bp GTGGCATTTTACACTCTCTGGAGCCAGGCGACCTCCTaGGACGTTACGGAATATATCCTCTGTCACCATTTT +
Preference number: 3 (lower is better)
Translates to: VAFYTLWSQATS*DVTEYILCHHF
Trigger: AAAATGGTGACAGAGGATATATTCCGTAACGTCTCAGGAGGTCGCCTGGCTCCAGAGAGTGTAAAATGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
3UTR GCA 72 bp ACTCCAAAGTTCACCGTTCACACAGTTTTTGGCTTGTaGTTTAGAGGCTGGTCTCTGCCTCTCCTAGGAATG +
Preference number: 3 (lower is better)
Translates to: TPKFTVHTVFGL*FRGWSLPLLGM
Trigger: CATTCCTAGGAGAGGCAGAGACCAGCCTCTAAAGCACAAGCCAAAAACTGTGTGAACGGTGAACTTTGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CAA 90 bp ACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTCCGTTCACACAGTTTTaGGCTTGTGCTTTAGAGGCT +
Preference number: 3 (lower is better)
Translates to: TFYPSKPLAFALRSNVHSPFTQF*ACALEA
Trigger: AGCCTCTAAAGCACAAGCCAAAAACTGTGTGAACGG...AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR TCA 72 bp GAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTaGGGTCCAATGTGCACTCTTCACCAAGTGCAAGAT +
Preference number: 3 (lower is better)
Translates to: EHFIQANHWLSP*GPMCTLHQVQD
Trigger: ATCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR GCA 72 bp TTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTaGAAGATTGATCTTCACTCCAAAGTTCACCGTTCA +
Preference number: 3 (lower is better)
Translates to: FRLEVQCALFTK*KIDLHSKVHRS
Trigger: TGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CAA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCCACTGGCTTTCGCCTaGAGGTCCAATGTGCACTCT +
Preference number: 3 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFPLAFA*RSNVHS
Trigger: AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGG...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CAA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCCACACAGTTTTTGGCTaGTGCTTTAGAGGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFHTVFG*CFRGWS
Trigger: AGACCAGCCTCTAAAGCACAAGCCAAAAACTGTGTG...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CAA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCCCGTTCACACAGTTTTaGGCTTGTGCTTTAGAGGCT +
Preference number: 3 (lower is better)
Translates to: FANRFHISSTGSFLRTVAPFTQF*ACALEA
Trigger: AGCCTCTAAAGCACAAGCCAAAAACTGTGTGAACGG...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR CCA 72 bp AATCCTTTCATCATGATTCTGATACTCTTCCAGGCGTaGGAACTACAGGTACCCACATGTATACCAAATAAT +
Preference number: 3 (lower is better)
Translates to: NPFIMILILFQA*ELQVPTCIPNN
Trigger: ATTATTTGGTATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATGAAAGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
3UTR-3UTR CAA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTTCATTGACTATGCTGTaGGTGGGGAAAACTGCTTTC +
Preference number: 3 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFSLTML*VGKTAF
Trigger: GAAAGCAGTTTTCCCCACCAACAGCATAGTCAATGA...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CAA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCTCACCAAGTGCAAGATaGATCTTCACTCCAAAGTTC +
Preference number: 3 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFSPSAR*IFTPKF
Trigger: GAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGA...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
3UTR-3UTR CAA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTTCACCAAGTGCAAGATaGATCTTCACTCCAAAGTTC +
Preference number: 3 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFSPSAR*IFTPKF
Trigger: GAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGA...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCCCCAGCGCACCCGCCTaGGGCCGGCGTTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: ILSPVASCGNILSKQTTGPSAPA*GRRWLL
Trigger: TAGCAGCCAACGCCGGCCCCAGGCGGGTGCGCTGGG...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409642.8
CDS-3UTR CCA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGACAGCAGGCAGAAGTGTaGCATATCTCGCCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGQQAEV*HISPPA
Trigger: CGCGGGCGGCGAGATATGCCACACTTCTGCCTGCTG...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AAGTCAGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCAGAGGAGCAGCATGCTaGCCTTGTGTGCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: KSDHLLRPCQIPILSPVARGAAC*PCVLGG
Trigger: ACCGCCCAGCACACAAGGTCAGCATGCTGCTCCTCT...GGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp GACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCCTGGTAGGTAGAGTGTaGGGGCACTGCTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: DHLLRPCQIPILSPVASCLVGRV*GHCCQM
Trigger: CATCTGGCAGCAGTGCCCCCACACTCTACCTACCAG...GCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCCAGCAGGCAGAAGTGTaGCATATCTCGCCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFQQAEV*HISPPA
Trigger: CGCGGGCGGCGAGATATGCCACACTTCTGCCTGCTG...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCCTAGTCCAGGAGGGTTaGCAACAGCAGGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: DHLLRPCQIPILSPVASCLVQEG*QQQAEV
Trigger: CACTTCTGCCTGCTGTTGGCAACCCTCCTGGACTAG...GCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACAGAGGAGCAGCATGCTaGCCTTGTGTGCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHRGAAC*PCVLGG
Trigger: ACCGCCCAGCACACAAGGTCAGCATGCTGCTCCTCT...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGACTGCCAGATGTTCTCTaGGCGTGCATTACGGCAAAC +
Preference number: 4 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGLPDVL*ACITAN
Trigger: GTTTGCCGTAATGCACGCTCAGAGAACATCTGGCAG...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCGTGTGGGGGCACTGCTaGCAGATGTTCTCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFVWGHC*QMFSER
Trigger: ACGCTCAGAGAACATCTGGCAGCAGTGCCCCCACAC...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AAGTCAGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCAGAGTGTGGGGGCACTaGTGCCAGATGTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KSDHLLRPCQIPILSPVARVWGH*CQMFSE
Trigger: CTCAGAGAACATCTGGCAGCAGTGCCCCCACACTCT...GGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCTGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGATCAGGTGGGACTAGTTaGCAGGATCCTCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGSGGTS*QDPLCR
Trigger: TCTGCAGAGAGGATCCTGGCAACTAGTCCCACCTGA...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp ACGTGTGGCATTTTACACTCTCTGGAGCCAGGCGACCTCCTGAGACGTTACGGACTAGTCCAGGAGGGTTaGCAACAGCAGGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: TCGILHSLEPGDLLRRYGLVQEG*QQQAEV
Trigger: CACTTCTGCCTGCTGTTGGCAACCCTCCTGGACTAG...TCCGTAACGTCTCAGGAGGTCGCCTGGCTCCAGAGAGTGTAAAATGCCACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR TCA 90 bp AAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGAAGAGGAGCAGCATGCTaGCCTTGTGTGCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: KPLAFALRSNVHSSPSARRGAAC*PCVLGG
Trigger: ACCGCCCAGCACACAAGGTCAGCATGCTGCTCCTCT...TCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACGCTATAGCGAGAGCGTaGCAGAGGAGCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHAIARA*QRSSML
Trigger: CAGCATGCTGCTCCTCTGTCACGCTCTCGCTATAGC...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCCATGCTGACCTTGTGTaGTGGGCGGTCCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFHADLV*WAVRTL
Trigger: AAGAGTTCGGACCGCCCAGCACACAAGGTCAGCATG...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp CCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTGTGTGGGGGCACTGCTaGCAGATGTTCTCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: PQSCGLMREHFIQANHWLVWGHC*QMFSER
Trigger: ACGCTCAGAGAACATCTGGCAGCAGTGCCCCCACAC...AAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGTCAGGTGGGACTAGTTaGCAGGATCCTCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMSGGTS*QDPLCR
Trigger: TCTGCAGAGAGGATCCTGGCAACTAGTCCCACCTGA...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCCTAGTCCAGGAGGGTTaGCAACAGCAGGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFLVQEG*QQQAEV
Trigger: CACTTCTGCCTGCTGTTGGCAACCCTCCTGGACTAG...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCCTGGTAGGTAGAGTGTaGGGGCACTGCTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: ILSPVASCGNILSKQTTGLVGRV*GHCCQM
Trigger: CATCTGGCAGCAGTGCCCCCACACTCTACCTACCAG...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACCTGGTAGGTAGAGTGTaGGGGCACTGCTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHLVGRV*GHCCQM
Trigger: CATCTGGCAGCAGTGCCCCCACACTCTACCTACCAG...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGGTGGCATCACAGCAATaGAAGCACAAAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMVASQQ*KHKDPG
Trigger: GCCTGGGTCTTTGTGCTTCCATTGCTGTGATGCCAC...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCCATCCTCAGTCCTGTaGCCTCATGCGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMPSSVL*PHAGTF
Trigger: AAATGTTCCCGCATGAGGCCACAGGACTGAGGATGG...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp CATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATACCAGAGGAGCAGCATGCTaGCCTTGTGTGCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: HDSDTLPGVGTTGTHMYTRGAAC*PCVLGG
Trigger: ACCGCCCAGCACACAAGGTCAGCATGCTGCTCCTCT...GGTATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR TCA 90 bp TCCAACGTGTGGCATTTTACACTCTCTGGAGCCAGGCGACCTCCTGAGACGTTATTCATTGACGTTGCCTaGGATCCTGCTCGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SNVWHFTLSGARRPPETLFIDVA*DPARRE
Trigger: TTCCCTGCGAGCAGGATCTCAGGCAACGTCAATGAA...TAACGTCTCAGGAGGTCGCCTGGCTCCAGAGAGTGTAAAATGCCACACGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR GCA 90 bp AAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCCATGCTGACCTTGTGTaGTGGGCGGTCCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: KQTTGFRLEVQCALFTKCHADLV*WAVRTL
Trigger: AAGAGTTCGGACCGCCCAGCACACAAGGTCAGCATG...GCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCCATGCTGACCTTGTGTaGTGGGCGGTCCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: ILSPVASCGNILSKQTTGHADLV*WAVRTL
Trigger: AAGAGTTCGGACCGCCCAGCACACAAGGTCAGCATG...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTAGAGTGTGGGGGCACTaGTGCCAGATGTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PVASCGNILSKQTTGFRLRVWGH*CQMFSE
Trigger: CTCAGAGAACATCTGGCAGCAGTGCCCCCACACTCT...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAAGTCCTGTGGCCTCATaGGGGAACATTTTATCCAAG +
Preference number: 4 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGSPVAS*GNILSK
Trigger: CTTGGATAAAATGTTCCCGCATGAGGCCACAGGACT...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCATCTTCTCAGGCCCTaGCAAATTCCCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMHLLRP*QIPILS
Trigger: ACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATG...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGATCCTCTCTGCAGAACTaGCCAAACGTAGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGSSLQN*PNVALF
Trigger: AAAGAGAGCTACGTTTGGGCAGTTCTGCAGAGAGGA...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCTCCTCTCTGCAGAACTaGCCAAACGTAGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: DHLLRPCQIPILSPVASCSSLQN*PNVALF
Trigger: AAAGAGAGCTACGTTTGGGCAGTTCTGCAGAGAGGA...GCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCTCAGGTGGGACTAGTTaGCAGGATCCTCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFSGGTS*QDPLCR
Trigger: TCTGCAGAGAGGATCCTGGCAACTAGTCCCACCTGA...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCCAAGAGGGTTTGACCTaGCAGCCTCTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ILSPVASCGNILSKQTTGQEGLT*QPLRQS
Trigger: TGACTGCCTCAGAGGCTGCCAGGTCAAACCCTCTTG...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGAGGCACACTTTTTGGTaGTGGATGTGCTTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMRHTFW*WMCFFR
Trigger: ACGGAAGAAGCACATCCATCACCAAAAAGTGTGCCT...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCCTGCCAGATGTTCTCTaGGCGTGCATTACGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ILSPVASCGNILSKQTTGLPDVL*ACITAN
Trigger: GTTTGCCGTAATGCACGCTCAGAGAACATCTGGCAG...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGTCCTCTCTGGAACAGTaGAAAGGTTTGCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMSSLEQ*KGLHSE
Trigger: CTCTGAGTGCAAACCTTTTCACTGTTCCAGAGAGGA...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409642.8
CDS-3UTR GCA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTCTAGTCCAGGAGGGTTaGCAACAGCAGGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLLVQEG*QQQAEV
Trigger: CACTTCTGCCTGCTGTTGGCAACCCTCCTGGACTAG...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGCTGACCTTGTGTGCTaGGCGGTCCGAACTCTTATA +
Preference number: 4 (lower is better)
Translates to: PVASCGNILSKQTTGFRLADLVC*AVRTLI
Trigger: TATAAGAGTTCGGACCGCCCAGCACACAAGGTCAGC...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTCCATCCTCAGTCCTGTaGCCTCATGCGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: PVASCGNILSKQTTGFRLPSSVL*PHAGTF
Trigger: AAATGTTCCCGCATGAGGCCACAGGACTGAGGATGG...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGTTTGACCAGGAAGCCTaGAAGTCAGACCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMFDQEA*KSDHLL
Trigger: GAGAAGATGGTCTGACTTCCAGGCTTCCTGGTCAAA...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGACAAGAGGGTTTGACCTaGCAGCCTCTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KPLAFALRSNVHSSPSARQEGLT*QPLRQS
Trigger: TGACTGCCTCAGAGGCTGCCAGGTCAAACCCTCTTG...TCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGACACTGGCTTTCGCCTTaGGGTCCAATGTGCACTCTT +
Preference number: 4 (lower is better)
Translates to: KPLAFALRSNVHSSPSARHWLSP*GPMCTL
Trigger: AAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTG...TCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACAAACGTAGCTCTCTTTaGCCAGGAAGCCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHKRSSL*PGSLEV
Trigger: GACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTT...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTAAACGTAGCTCTCTTTaGCCAGGAAGCCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PVASCGNILSKQTTGFRLKRSSL*PGSLEV
Trigger: GACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTT...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCAGTTGCCTTTCTCATTaGCTATGCTGTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFSCLSH*LCCWWG
Trigger: TCCCCACCAACAGCATAGTCAATGAGAAAGGCAACT...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp TCGGATAATCATCTCATCCAACGTGTGGCATTTTACACTCTCTGGAGCCAGGCGAGCCAGGCGACCTCCTaGGACGTTACGGAATATATC +
Preference number: 4 (lower is better)
Translates to: SDNHLIQRVAFYTLWSQASQATS*DVTEYI
Trigger: GATATATTCCGTAACGTCTCAGGAGGTCGCCTGGCT...CGCCTGGCTCCAGAGAGTGTAAAATGCCACACGTTGGATGAGATGATTATCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR GCA 90 bp CATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATACCCATGCTGACCTTGTGTaGTGGGCGGTCCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: HDSDTLPGVGTTGTHMYTHADLV*WAVRTL
Trigger: AAGAGTTCGGACCGCCCAGCACACAAGGTCAGCATG...GGTATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR GCA 90 bp ACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTGTGTGGGGGCACTGCTaGCAGATGTTCTCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: TFYPSKPLAFALRSNVHSVWGHC*QMFSER
Trigger: ACGCTCAGAGAACATCTGGCAGCAGTGCCCCCACAC...AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAAGTGTGGGGGCACTGCTaGCAGATGTTCTCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKVWGHC*QMFSER
Trigger: ACGCTCAGAGAACATCTGGCAGCAGTGCCCCCACAC...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCAAGAGTGTGGGGGCACTaGTGCCAGATGTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GNILSKQTTGFRLEVQCARVWGH*CQMFSE
Trigger: CTCAGAGAACATCTGGCAGCAGTGCCCCCACACTCT...TGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCGAAGCTATTTGGAAATaGTGTAGGGTCGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFEAIWK*CRVERR
Trigger: CCTCCTCTCGACCCTACACCATTTCCAAATAGCTTC...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACTGGTAGGTAGAGTGTaGGGGCACTGCTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKLVGRV*GHCCQM
Trigger: CATCTGGCAGCAGTGCCCCCACACTCTACCTACCAG...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCTTGTGCTTTAGAGGCTaGTCTCTGCCTCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: KQTTGFRLEVQCALFTKCLCFRG*SLPLLG
Trigger: TCCTAGGAGAGGCAGAGACCAGCCTCTAAAGCACAA...GCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp GGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACAAGAGGGTTTGACCTaGCAGCCTCTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GNILSKQTTGFRLEVQCAQEGLT*QPLRQS
Trigger: TGACTGCCTCAGAGGCTGCCAGGTCAAACCCTCTTG...TGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCAACCGACAAAATaGCATTCACTTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHWQPTK*HSLLEA
Trigger: TGCCTCCAGAAGTGAATGTCATTTTGTCGGTTGCCA...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTAAACGTAGCTCTCTTTaGCCAGGAAGCCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLKRSSL*PGSLEV
Trigger: GACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTT...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTAGTTGCCTTTCTCATTaGCTATGCTGTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PVASCGNILSKQTTGFRLSCLSH*LCCWWG
Trigger: TCCCCACCAACAGCATAGTCAATGAGAAAGGCAACT...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACATGCTGACCTTGTGTaGTGGGCGGTCCGAACTCTT +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKHADLV*WAVRTL
Trigger: AAGAGTTCGGACCGCCCAGCACACAAGGTCAGCATG...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCTTCTGCCCATCGATTaGAGTTATAATTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMLLPID*SYNYPL
Trigger: CAGGGGATAATTATAACTGCAATCGATGGGCAGAAG...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGACATCTTCTCAGGCCCTaGCAAATTCCCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: KPLAFALRSNVHSSPSARHLLRP*QIPILS
Trigger: ACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATG...TCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCTCCTCTCTGCAGAACTaGCCAAACGTAGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KQTTGFRLEVQCALFTKCSSLQN*PNVALF
Trigger: AAAGAGAGCTACGTTTGGGCAGTTCTGCAGAGAGGA...GCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCAGGTGGGACTAGTTaGCAGGATCCTCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GTFYPSKPLAFALRSNVHSGGTS*QDPLCR
Trigger: TCTGCAGAGAGGATCCTGGCAACTAGTCCCACCTGA...GTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp TTCATCATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTCTAGTCCAGGAGGGTTaGCAACAGCAGGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: FIMILILFQAWELQVPTCLVQEG*QQQAEV
Trigger: CACTTCTGCCTGCTGTTGGCAACCCTCCTGGACTAG...ACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR CCA 90 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACGCTGACCTTGTGTGCTaGGCGGTCCGAACTCTTATA +
Preference number: 4 (lower is better)
Translates to: GTFYPSKPLAFALRSNVHADLVC*AVRTLI
Trigger: TATAAGAGTTCGGACCGCCCAGCACACAAGGTCAGC...GTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTTTGACCAGGAAGCCTaGAAGTCAGACCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHFDQEA*KSDHLL
Trigger: GAGAAGATGGTCTGACTTCCAGGCTTCCTGGTCAAA...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp TTTACACTCTCTGGAGCCAGGCGACCTCCTGAGACGTTACGGAATATATCCTCTCAGCAGGCAGAAGTGTaGCATATCTGGATAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FTLSGARRPPETLRNISSQQAEV*HIWIGS
Trigger: ACTGCCTATCCAGATATGCCACACTTCTGCCTGCTG...AGAGGATATATTCCGTAACGTCTCAGGAGGTCGCCTGGCTCCAGAGAGTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR CCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGTCAGGCTCCTCTCTaGAACAGTGAAAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHCQAPL*NSEKVC
Trigger: GCAAACCTTTTCACTGTTCCAGAGAGGAGCCTGACA...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409642.8
CDS-3UTR TCA 90 bp AAGTCAGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCACATTATAGAAGTTaGTGTTCTTGGCAAATGCCC +
Preference number: 4 (lower is better)
Translates to: KSDHLLRPCQIPILSPVASHYRS*CSWQMP
Trigger: GGGCATTTGCCAAGAACATCAACTTCTATAATGTGA...GGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACACTGGCTTTCGCCTTaGGGTCCAATGTGCACTCTT +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKHWLSP*GPMCTL
Trigger: AAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTG...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTAGTTGCCTTTCTCATTaGCTATGCTGTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLSCLSH*LCCWWG
Trigger: TCCCCACCAACAGCATAGTCAATGAGAAAGGCAACT...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp TCCAACGTGTGGCATTTTACACTCTCTGGAGCCAGGCGACCTCCTGAGACGTTAACTATTTCCCAAGTCTaGGCTCGGATAATCATCTCA +
Preference number: 4 (lower is better)
Translates to: SNVWHFTLSGARRPPETLTISQV*ARIIIS
Trigger: TGAGATGATTATCCGAGCTCAGACTTGGGAAATAGT...TAACGTCTCAGGAGGTCGCCTGGCTCCAGAGAGTGTAAAATGCCACACGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR TCA 90 bp GCCAGGCGACCTCCTGAGACGTTACGGAATATATCCTCTGTCACCATTTTCCTTCTTGGTCCAGAAGCATaGCTATTTCCCAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ARRPPETLRNISSVTIFLLGPEA*LFPKSE
Trigger: CTCAGACTTGGGAAATAGTCATGCTTCTGGACCAAG...AAGGAAAATGGTGACAGAGGATATATTCCGTAACGTCTCAGGAGGTCGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR GCA 90 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACCATCTTCTCAGGCCCTaGCAAATTCCCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GTFYPSKPLAFALRSNVHHLLRP*QIPILS
Trigger: ACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATG...GTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp ATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATACCAGCTGACCTTGTGTGCTaGGCGGTCCGAACTCTTATA +
Preference number: 4 (lower is better)
Translates to: MILILFQAWELQVPTCIPADLVC*AVRTLI
Trigger: TATAAGAGTTCGGACCGCCCAGCACACAAGGTCAGC...TGGTATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR CCA 90 bp AAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGAGAAGCTATTTGGAAATaGTGTAGGGTCGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KPLAFALRSNVHSSPSAREAIWK*CRVERR
Trigger: CCTCCTCTCGACCCTACACCATTTCCAAATAGCTTC...TCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGCACTTGAAGCTATTTaGAAATGGTGTAGGGTCGAG +
Preference number: 4 (lower is better)
Translates to: PVASCGNILSKQTTGFRLALEAI*KWCRVE
Trigger: CTCGACCCTACACCATTTCCAAATAGCTTCAAGTGC...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCGCACTTGAAGCTATTTaGAAATGGTGTAGGGTCGAG +
Preference number: 4 (lower is better)
Translates to: KQTTGFRLEVQCALFTKCALEAI*KWCRVE
Trigger: CTCGACCCTACACCATTTCCAAATAGCTTCAAGTGC...GCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAAGTGGCATCACAGCAATaGAAGCACAAAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKVASQQ*KHKDPG
Trigger: GCCTGGGTCTTTGTGCTTCCATTGCTGTGATGCCAC...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTTGTGCTTTAGAGGCTaGTCTCTGCCTCTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: GTFYPSKPLAFALRSNVHLCFRG*SLPLLG
Trigger: TCCTAGGAGAGGCAGAGACCAGCCTCTAAAGCACAA...GTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCATCCTCAGTCCTGTaGCCTCATGCGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKPSSVL*PHAGTF
Trigger: AAATGTTCCCGCATGAGGCCACAGGACTGAGGATGG...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp TCCAACGTGTGGCATTTTACACTCTCTGGAGCCAGGCGACCTCCTGAGACGTTAATCTCATCCAACGTGTaGCATTTTACACTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SNVWHFTLSGARRPPETLISSNV*HFTLSG
Trigger: TCCAGAGAGTGTAAAATGCCACACGTTGGATGAGAT...TAACGTCTCAGGAGGTCGCCTGGCTCCAGAGAGTGTAAAATGCCACACGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR TCA 90 bp AAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGAAAATGCCCAGCTTTCTaGGAAGATAACGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: KPLAFALRSNVHSSPSARKCPAF*EDNDLD
Trigger: GTCCAGATCGTTATCTTCTCAGAAAGCTGGGCATTT...TCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTAAATGCCCAGCTTTCTaGGAAGATAACGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLKCPAF*EDNDLD
Trigger: GTCCAGATCGTTATCTTCTCAGAAAGCTGGGCATTT...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCTCACATTATAGAAGTTaGTGTTCTTGGCAAATGCCC +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFSHYRS*CSWQMP
Trigger: GGGCATTTGCCAAGAACATCAACTTCTATAATGTGA...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCATGGCAACCGACAAAATaGCATTCACTTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GNILSKQTTGFRLEVQCAWQPTK*HSLLEA
Trigger: TGCCTCCAGAAGTGAATGTCATTTTGTCGGTTGCCA...TGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAGTTATAATTATCCCCTaGGTTTTCACAAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGVIIIP*VFTSKA
Trigger: TGCTTTACTTGTGAAAACGCAGGGGATAATTATAAC...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACCTTCTGCCCATCGATTaGAGTTATAATTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHLLPID*SYNYPL
Trigger: CAGGGGATAATTATAACTGCAATCGATGGGCAGAAG...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCACACCATTTGTCTTCTaGCCATCGATTGCAGTTATA +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFTPFVF*PSIAVI
Trigger: TATAACTGCAATCGATGGGCAGAAGACAAATGGTGT...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTTGGTGGGGAAAAGAGTGTGGGGGCACTaGTGCCAGATGTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: EVFFVQLPFSLTMLLVGKRVWGH*CQMFSE
Trigger: CTCAGAGAACATCTGGCAGCAGTGCCCCCACACTCT...TTTCCCCACCAACAGCATAGTCAATGAGAAAGGCAACTGTACGAAGAAAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACAGTCCTGTGGCCTCATaGGGGAACATTTTATCCAAG +
Preference number: 4 (lower is better)
Translates to: GTFYPSKPLAFALRSNVHSPVAS*GNILSK
Trigger: CTTGGATAAAATGTTCCCGCATGAGGCCACAGGACT...GTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACATCTTCTCAGGCCCTaGCAAATTCCCATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKHLLRP*QIPILS
Trigger: ACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATG...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp CATGACTATTTCCCAAGTCTGAGCTCGGATAATCATCTCATCCAACGTGTGGCACGTTGCCTGAGATCCTaGTCGCAGGGAATCTTACTT +
Preference number: 4 (lower is better)
Translates to: HDYFPSLSSDNHLIQRVARCLRS*SQGILL
Trigger: AAGTAAGATTCCCTGCGAGCAGGATCTCAGGCAACG...TGCCACACGTTGGATGAGATGATTATCCGAGCTCAGACTTGGGAAATAGTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR CCA 90 bp CTCTTCACCAAGTGCAAGATTGATCTTCACTCCAAAGTTCACCGTTCACACAGTGCTGACCTTGTGTGCTaGGCGGTCCGAACTCTTATA +
Preference number: 4 (lower is better)
Translates to: LFTKCKIDLHSKVHRSHSADLVC*AVRTLI
Trigger: TATAAGAGTTCGGACCGCCCAGCACACAAGGTCAGC...ACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGAAGATAACGATCTaGACAACAGCTATAGCGAGA +
Preference number: 4 (lower is better)
Translates to: PVASCGNILSKQTTGFRLEKITI*TTAIAR
Trigger: TCTCGCTATAGCTGTTGTCCAGATCGTTATCTTCTC...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACGAAGCTATTTGGAAATaGTGTAGGGTCGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GTFYPSKPLAFALRSNVHEAIWK*CRVERR
Trigger: CCTCCTCTCGACCCTACACCATTTCCAAATAGCTTC...GTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTGCACTTGAAGCTATTTaGAAATGGTGTAGGGTCGAG +
Preference number: 4 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLALEAI*KWCRVE
Trigger: CTCGACCCTACACCATTTCCAAATAGCTTCAAGTGC...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CTCTTCACCAAGTGCAAGATTGATCTTCACTCCAAAGTTCACCGTTCACACAGTGTGGCATCACAGCAATaGAAGCACAAAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LFTKCKIDLHSKVHRSHSVASQQ*KHKDPG
Trigger: GCCTGGGTCTTTGTGCTTCCATTGCTGTGATGCCAC...ACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACAGCAGGCAGAAGTGTaGCATATCTGGATAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKQQAEV*HIWIGS
Trigger: ACTGCCTATCCAGATATGCCACACTTCTGCCTGCTG...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409029.5
CDS-3UTR CCA 90 bp CATCATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATATACTCTTCCAGGCGTaGGAACTACAGGTACCCACA +
Preference number: 4 (lower is better)
Translates to: HHDSDTLPGVGTTGTHMYILFQA*ELQVPT
Trigger: TGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTAT...ATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR TCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAAAGGCACACTTTTTGGTaGTGGATGTGCTTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKRHTFW*WMCFFR
Trigger: ACGGAAGAAGCACATCCATCACCAAAAAGTGTGCCT...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAATGGCAACCGACAAAATaGCATTCACTTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKWQPTK*HSLLEA
Trigger: TGCCTCCAGAAGTGAATGTCATTTTGTCGGTTGCCA...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp CCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTAACACTGCATTAGTGTaGTTGGTGGGTAATTCTACA +
Preference number: 4 (lower is better)
Translates to: PQSCGLMREHFIQANHWLNTALV*LVGNST
Trigger: TGTAGAATTACCCACCAATCACACTAATGCAGTGTT...AAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCTTCATAGAGATGCTCTaGGCTAATCACATAAACAAG +
Preference number: 4 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFFIEML*ANHINK
Trigger: CTTGTTTATGTGATTAGCTCAGAGCATCTCTATGAA...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AGTCTGAGCTCGGATAATCATCTCATCCAACGTGTGGCATTTTACACTCTCTGGCTTCATGTTGTTCATTaGCGTTGCCTGAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SLSSDNHLIQRVAFYTLWLHVVH*RCLRSC
Trigger: GCAGGATCTCAGGCAACGTCAATGAACAACATGAAG...CCAGAGAGTGTAAAATGCCACACGTTGGATGAGATGATTATCCGAGCTCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR GCA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTACACCATTTGTCTTCTaGCCATCGATTGCAGTTATA +
Preference number: 4 (lower is better)
Translates to: PVASCGNILSKQTTGFRLTPFVF*PSIAVI
Trigger: TATAACTGCAATCGATGGGCAGAAGACAAATGGTGT...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTGAGAAGATAACGATCTaGACAACAGCTATAGCGAGA +
Preference number: 4 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLEKITI*TTAIAR
Trigger: TCTCGCTATAGCTGTTGTCCAGATCGTTATCTTCTC...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp GAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTTGGTGGGGAAAGTGGCATCACAGCAATaGAAGCACAAAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: EVFFVQLPFSLTMLLVGKVASQQ*KHKDPG
Trigger: GCCTGGGTCTTTGTGCTTCCATTGCTGTGATGCCAC...TTTCCCCACCAACAGCATAGTCAATGAGAAAGGCAACTGTACGAAGAAAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp ATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATACCAAATCAGCAGGCAGAAGTGTaGCATATCTGGATAGGCAGT +
Preference number: 4 (lower is better)
Translates to: ILILFQAWELQVPTCIPNQQAEV*HIWIGS
Trigger: ACTGCCTATCCAGATATGCCACACTTCTGCCTGCTG...ATTTGGTATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR CCA 90 bp ACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTTGAGAAGGAGAATGTaGTTGTCAGGCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TFYPSKPLAFALRSNVHSLRRRM*LSGSSL
Trigger: CAGAGAGGAGCCTGACAACCACATTCTCCTTCTCAA...AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409642.8
CDS-3UTR CCA 90 bp CATCATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATAAGACGTTTTACTTGTaGTCGAGAGGAGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: HHDSDTLPGVGTTGTHMYKTFYL*SRGGLT
Trigger: TGTGAGGCCTCCTCTCGACCACAAGTAAAACGTCTT...ATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442722.5
3UTR CAA 72 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTaGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: GTFYPSKPLAFA*RSNVHSSPSAR
Trigger: TCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp TTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCAAAATGCCCAGCTTTCTaGGAAGATAACGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: FYPSKPLAFALRSNVHSSKCPAF*EDNDLD
Trigger: GTCCAGATCGTTATCTTCTCAGAAAGCTGGGCATTT...TGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAAAAATGCCCAGCTTTCTaGGAAGATAACGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKKCPAF*EDNDLD
Trigger: GTCCAGATCGTTATCTTCTCAGAAAGCTGGGCATTT...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTTGGTGGGGAAAAAACGTAGCTCTCTTTaGCCAGGAAGCCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: EVFFVQLPFSLTMLLVGKKRSSL*PGSLEV
Trigger: GACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTT...TTTCCCCACCAACAGCATAGTCAATGAGAAAGGCAACTGTACGAAGAAAACTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTTCATAGAGATGCTCTaGGCTAATCACATAAACAAG +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHFIEML*ANHINK
Trigger: CTTGTTTATGTGATTAGCTCAGAGCATCTCTATGAA...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp CTCTTCACCAAGTGCAAGATTGATCTTCACTCCAAAGTTCACCGTTCACACAGTAGTCCTGTGGCCTCATaGGGGAACATTTTATCCAAG +
Preference number: 4 (lower is better)
Translates to: LFTKCKIDLHSKVHRSHSSPVAS*GNILSK
Trigger: CTTGGATAAAATGTTCCCGCATGAGGCCACAGGACT...ACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp TCCTTTCATCATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACGAGAAGATAACGATCTaGACAACAGCTATAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SFHHDSDTLPGVGTTGTHEKITI*TTAIAR
Trigger: TCTCGCTATAGCTGTTGTCCAGATCGTTATCTTCTC...GTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR CCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAAGCACTTGAAGCTATTTaGAAATGGTGTAGGGTCGAG +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKALEAI*KWCRVE
Trigger: CTCGACCCTACACCATTTCCAAATAGCTTCAAGTGC...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAAGTGTGGCATATCTaGATAGGCAGTTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: PVASCGNILSKQTTGFRLEVWHI*IGSYCF
Trigger: AAAACAATAACTGCCTATCCAGATATGCCACACTTC...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409029.5
CDS-3UTR TCA 90 bp CTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATACCAAATAATAAATGCCCAGCTTTCTaGGAAGATAACGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: LILFQAWELQVPTCIPNNKCPAF*EDNDLD
Trigger: GTCCAGATCGTTATCTTCTCAGAAAGCTGGGCATTT...ATTATTTGGTATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR TCA 90 bp GAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTTGGTGGGGAAAAGGCACACTTTTTGGTaGTGGATGTGCTTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: EVFFVQLPFSLTMLLVGKRHTFW*WMCFFR
Trigger: ACGGAAGAAGCACATCCATCACCAAAAAGTGTGCCT...TTTCCCCACCAACAGCATAGTCAATGAGAAAGGCAACTGTACGAAGAAAACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTTGGTGGGGAAATGGCAACCGACAAAATaGCATTCACTTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: EVFFVQLPFSLTMLLVGKWQPTK*HSLLEA
Trigger: TGCCTCCAGAAGTGAATGTCATTTTGTCGGTTGCCA...TTTCCCCACCAACAGCATAGTCAATGAGAAAGGCAACTGTACGAAGAAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACAACACTGCATTAGTGTaGTTGGTGGGTAATTCTACA +
Preference number: 4 (lower is better)
Translates to: GTFYPSKPLAFALRSNVHNTALV*LVGNST
Trigger: TGTAGAATTACCCACCAATCACACTAATGCAGTGTT...GTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACGTTATAATTATCCCCTaGGTTTTCACAAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: SHPQSCGLMREHFIQANHVIIIP*VFTSKA
Trigger: TGCTTTACTTGTGAAAACGCAGGGGATAATTATAAC...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCGTTATAATTATCCCCTaGGTTTTCACAAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: ILSPVASCGNILSKQTTGVIIIP*VFTSKA
Trigger: TGCTTTACTTGTGAAAACGCAGGGGATAATTATAAC...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACTTCTGCCCATCGATTaGAGTTATAATTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKLLPID*SYNYPL
Trigger: CAGGGGATAATTATAACTGCAATCGATGGGCAGAAG...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCAACACCATTTGTCTTCTaGCCATCGATTGCAGTTATA +
Preference number: 4 (lower is better)
Translates to: GNILSKQTTGFRLEVQCATPFVF*PSIAVI
Trigger: TATAACTGCAATCGATGGGCAGAAGACAAATGGTGT...TGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp CTCTTCACCAAGTGCAAGATTGATCTTCACTCCAAAGTTCACCGTTCACACAGTACAGTTTTTGGCTTGTaGTTTAGAGGCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LFTKCKIDLHSKVHRSHSTVFGL*FRGWSL
Trigger: CAGAGACCAGCCTCTAAAGCACAAGCCAAAAACTGT...ACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp TCTGGAGCCAGGCGACCTCCTGAGACGTTACGGAATATATCCTCTGTCACCATTTCTTCTTCTGTACAATaGCTTTCACATAACATCCAT +
Preference number: 4 (lower is better)
Translates to: SGARRPPETLRNISSVTISSSVQ*LSHNIH
Trigger: ATGGATGTTATGTGAAAGGCATTGTACAGAAGAAGA...AATGGTGACAGAGGATATATTCCGTAACGTCTCAGGAGGTCGCCTGGCTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR CCA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAAGAGAAGATAACGATCTaGACAACAGCTATAGCGAGA +
Preference number: 4 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKEKITI*TTAIAR
Trigger: TCTCGCTATAGCTGTTGTCCAGATCGTTATCTTCTC...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp TTCATCATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTGCACTTGAAGCTATTTaGAAATGGTGTAGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FIMILILFQAWELQVPTCALEAI*KWCSLL
Trigger: CAAGAGGCTACACCATTTCCAAATAGCTTCAAGTGC...ACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
3UTR CAA 72 bp TTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGATaGATCTTCACTCCAAAGTTCACCGTTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: LRSNVHSSPSAR*IFTPKFTVHTV
Trigger: AACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp CATCATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATTCACATTATAGAAGTTaGTGTTCTTGGCAAATGCCC +
Preference number: 4 (lower is better)
Translates to: HHDSDTLPGVGTTGTHMYSHYRS*CSWQMP
Trigger: GGGCATTTGCCAAGAACATCAACTTCTATAATGTGA...ATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR TCA 90 bp TTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCAAACACTGCATTAGTGTaGTTGGTGGGTAATTCTACA +
Preference number: 4 (lower is better)
Translates to: FYPSKPLAFALRSNVHSSNTALV*LVGNST
Trigger: TGTAGAATTACCCACCAATCACACTAATGCAGTGTT...TGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCATTCATAGAGATGCTCTaGGCTAATCACATAAACAAG +
Preference number: 4 (lower is better)
Translates to: GNILSKQTTGFRLEVQCAFIEML*ANHINK
Trigger: CTTGTTTATGTGATTAGCTCAGAGCATCTCTATGAA...TGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp ATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATACCAAATAATGGTGTAGCCTCTTaGCTGTTAAATCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ILILFQAWELQVPTCIPNNGVAS*LLNLWR
Trigger: TCTCCAGAGATTTAACAGTCAAGAGGCTACACCATT...ATTTGGTATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR GCA 90 bp CTCTTCACCAAGTGCAAGATTGATCTTCACTCCAAAGTTCACCGTTCACACAGTCTTCTGCCCATCGATTaGAGTTATAATTATCCCCTG +
Preference number: 4 (lower is better)
Translates to: LFTKCKIDLHSKVHRSHSLLPID*SYNYPL
Trigger: CAGGGGATAATTATAACTGCAATCGATGGGCAGAAG...ACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp ACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTGTACTGTGTATTTTGTaGACACCATTTGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TFYPSKPLAFALRSNVHSVLCIL*TPFVFC
Trigger: GCAGAAGACAAATGGTGTCCACAAAATACACAGTAC...AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCCAAGAGGGTTTGACCTaGCAGCCTCTGAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFQEGLT*QPLRQS
Trigger: TGACTGCCTCAGAGGCTGCCAGGTCAAACCCTCTTG...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp ATAATCATCTCATCCAACGTGTGGCATTTTACACTCTCTGGAGCCAGGCGACCTGAAGTGTGGCATATCTaGATAGGCAGTTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: IIISSNVWHFTLSGARRPEVWHI*IGSYCF
Trigger: AAAACAATAACTGCCTATCCAGATATGCCACACTTC...AGGTCGCCTGGCTCCAGAGAGTGTAAAATGCCACACGTTGGATGAGATGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR TCA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCTGCCAGATGTTCTCTaGGCGTGCATTACGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFLPDVL*ACITAN
Trigger: GTTTGCCGTAATGCACGCTCAGAGAACATCTGGCAG...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCCTGCCAGATGTTCTCTaGGCGTGCATTACGGCAAAC +
Preference number: 4 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFLPDVL*ACITAN
Trigger: GTTTGCCGTAATGCACGCTCAGAGAACATCTGGCAG...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCACTGGCTTTCGCCTTaGGGTCCAATGTGCACTCTT +
Preference number: 4 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFHWLSP*GPMCTL
Trigger: AAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTG...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCGCTGACCTTGTGTGCTaGGCGGTCCGAACTCTTATA +
Preference number: 4 (lower is better)
Translates to: FANRFHISSTGSFLRTVAADLVC*AVRTLI
Trigger: TATAAGAGTTCGGACCGCCCAGCACACAAGGTCAGC...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CTCTTCACCAAGTGCAAGATTGATCTTCACTCCAAAGTTCACCGTTCACACAGTGTACTGTGTATTTTGTaGACACCATTTGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LFTKCKIDLHSKVHRSHSVLCIL*TPFVFC
Trigger: GCAGAAGACAAATGGTGTCCACAAAATACACAGTAC...ACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCCATCCTCAGTCCTGTaGCCTCATGCGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFPSSVL*PHAGTF
Trigger: AAATGTTCCCGCATGAGGCCACAGGACTGAGGATGG...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp TTCATCATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTGAAGTGTGGCATATCTaGATAGGCAGTTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: FIMILILFQAWELQVPTCEVWHI*IGSYCF
Trigger: AAAACAATAACTGCCTATCCAGATATGCCACACTTC...ACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR CCA 90 bp ATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTATACCAAATGAAGCTATTTGGAAATaGTGTAGCCTCTTGACTGTT +
Preference number: 4 (lower is better)
Translates to: ILILFQAWELQVPTCIPNEAIWK*CSLLTV
Trigger: AACAGTCAAGAGGCTACACCATTTCCAAATAGCTTC...ATTTGGTATACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR TCA 90 bp GAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTTGGTGGGGAAACGAACTCTTATATCTTaGGAAGGAGAATGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: EVFFVQLPFSLTMLLVGKRTLIS*EGECGC
Trigger: ACAACCACATTCTCCTTCTCAAGATATAAGAGTTCG...TTTCCCCACCAACAGCATAGTCAATGAGAAAGGCAACTGTACGAAGAAAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409642.8
CDS-3UTR TCA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTAGGCACACTTTTTGGTaGTGGATGTGCTTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFRHTFW*WMCFFR
Trigger: ACGGAAGAAGCACATCCATCACCAAAAAGTGTGCCT...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCAGTTGCCTTTCTCATTaGCTATGCTGTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FANRFHISSTGSFLRTVASCLSH*LCCWWG
Trigger: TCCCCACCAACAGCATAGTCAATGAGAAAGGCAACT...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp CTCTTCACCAAGTGCAAGATTGATCTTCACTCCAAAGTTCACCGTTCACACAGTGTTATAATTATCCCCTaGGTTTTCACAAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: LFTKCKIDLHSKVHRSHSVIIIP*VFTSKA
Trigger: TGCTTTACTTGTGAAAACGCAGGGGATAATTATAAC...ACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCAGTCCTGTGGCCTCATaGGGGAACATTTTATCCAAG +
Preference number: 4 (lower is better)
Translates to: FANRFHISSTGSFLRTVASPVAS*GNILSK
Trigger: CTTGGATAAAATGTTCCCGCATGAGGCCACAGGACT...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCGAAGCTATTTGGAAATaGTGTAGGGTCGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFEAIWK*CRVERR
Trigger: CCTCCTCTCGACCCTACACCATTTCCAAATAGCTTC...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCTTTGACCAGGAAGCCTaGAAGTCAGACCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFFDQEA*KSDHLL
Trigger: GAGAAGATGGTCTGACTTCCAGGCTTCCTGGTCAAA...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTACAGTTTTTGGCTTGTaGTTTAGAGGCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFTVFGL*FRGWSL
Trigger: CAGAGACCAGCCTCTAAAGCACAAGCCAAAAACTGT...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCACAGTTTTTGGCTTGTaGTTTAGAGGCTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FANRFHISSTGSFLRTVATVFGL*FRGWSL
Trigger: CAGAGACCAGCCTCTAAAGCACAAGCCAAAAACTGT...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCTCACATTATAGAAGTTaGTGTTCTTGGCAAATGCCC +
Preference number: 4 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFSHYRS*CSWQMP
Trigger: GGGCATTTGCCAAGAACATCAACTTCTATAATGTGA...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCAACACTGCATTAGTGTaGTTGGTGGGTAATTCTACA +
Preference number: 4 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFNTALV*LVGNST
Trigger: TGTAGAATTACCCACCAATCACACTAATGCAGTGTT...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR GCA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCACACCATTTGTCTTCTaGCCATCGATTGCAGTTATA +
Preference number: 4 (lower is better)
Translates to: FANRFHISSTGSFLRTVATPFVF*PSIAVI
Trigger: TATAACTGCAATCGATGGGCAGAAGACAAATGGTGT...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCGTACTGTGTATTTTGTaGACACCATTTGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFVLCIL*TPFVFC
Trigger: GCAGAAGACAAATGGTGTCCACAAAATACACAGTAC...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CCA 90 bp TTTGCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCGTACTGTGTATTTTGTaGACACCATTTGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FANRFHISSTGSFLRTVAVLCIL*TPFVFC
Trigger: GCAGAAGACAAATGGTGTCCACAAAATACACAGTAC...GGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR TCA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTTTCATAGAGATGCTCTaGGCTAATCACATAAACAAG +
Preference number: 4 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFFIEML*ANHINK
Trigger: CTTGTTTATGTGATTAGCTCAGAGCATCTCTATGAA...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS GCA 90 bp CCAGATGTTCCCTGGTTTGGGCTCATTCCTGCTCGCCTTGTCACCTaGTACATTGGAGACTGGCTCTGGCGGAGAAGCACCCCTTCATGG +
Preference number: 5 (lower is better)
Translates to: PDVPWFGLIPARLVT*YIGDWLWRRSTPSW
Trigger: CCATGAAGGGGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCAAACCAGGGAACATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CCA 90 bp TCCCTGGTTTGGGCTCATTCCTGCTCGCCTTGTCACCTGCTACATTaGAGACTGGCTCTGGCGGAGAAGCACCCCTTCATGGAGATGGCT +
Preference number: 5 (lower is better)
Translates to: SLVWAHSCSPCHLLH*RLALAEKHPFMEMA
Trigger: AGCCATCTCCATGAAGGGGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCAAACCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS TCA 90 bp ATGACAAGCAGGCAGAGCTGGCCTGGCTGCACCCCATTCCCTCAGTaGCTGCGGCTAGCTGGTTTCCTCTGTGCTGAATCACTGGATTTC +
Preference number: 5 (lower is better)
Translates to: MTSRQSWPGCTPFPQ*LRLAGFLCAESLDF
Trigger: GAAATCCAGTGATTCAGCACAGAGGAAACCAGCTAGCCGCAGTCACTGAGGGAATGGGGTGCAGCCAGGCCAGCTCTGCCTGCTTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498249.1
CDS CCA 90 bp CTCATTCCTGCTCGCCTTGTCACCTGCTACATTGGAGACTGGCTCTaGCGGAGAAGCACCCCTTCATGGAGATGGCTAGGTTCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LIPARLVTCYIGDWL*RRSTPSWRWLGSLQ
Trigger: CTGAAGGGAACCTAGCCATCTCCATGAAGGGGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CCA 90 bp TTTGGGCTCATTCCTGCTCGCCTTGTCACCTGCTACATTGGAGACTaGCTCTGGCGGAGAAGCACCCCTTCATGGAGATGGCTAGGTTCC +
Preference number: 5 (lower is better)
Translates to: FGLIPARLVTCYIGD*LWRRSTPSWRWLGS
Trigger: GGAACCTAGCCATCTCCATGAAGGGGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS GCA 90 bp GCACAAAGACCCAGGCAAGCACTGGTAGGTAGAGTGTGGGGGCACTaGTGCCAGATGTTCTCTGAGCGTGCATTACGGCAAACACTGCAT +
Preference number: 5 (lower is better)
Translates to: AQRPRQALVGRVWGH*CQMFSERALRQTLH
Trigger: ATGCAGTGTTTGCCGTAATGCACGCTCAGAGAACATCTGGCAGCAGTGCCCCCACACTCTACCTACCAGTGCTTGCCTGGGTCTTTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000498249.1
CDS CCA 90 bp GCAATGGAAGCACAAAGACCCAGGCAAGCACTGGTAGGTAGAGTGTaGGGGCACTGCTGCCAGATGTTCTCTGAGCGTGCATTACGGCAA +
Preference number: 5 (lower is better)
Translates to: AMEAQRPRQALVGRV*GHCCQMFSERALRQ
Trigger: TTGCCGTAATGCACGCTCAGAGAACATCTGGCAGCAGTGCCCCCACACTCTACCTACCAGTGCTTGCCTGGGTCTTTGTGCTTCCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000498249.1
CDS-3UTR CAA 90 bp AACTGCCCAAACGTAGCTCTCTTTGACCAGGAAGCCTGGAAGTCAGACCATCTTAGCAGCATGCTGACCTaGTGTGCTGGGCGGTCCGAA +
Preference number: 5 (lower is better)
Translates to: NCPNVALFDQEAWKSDHLSSMLT*CAGRSE
Trigger: TTCGGACCGCCCAGCACACAAGGTCAGCATGCTGCT...AAGATGGTCTGACTTCCAGGCTTCCTGGTCAAAGAGAGCTACGTTTGGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS TCA 90 bp CTTTCTGAGAAGATAACGATCTGGACAACAGCTATAGCGAGAGCGTaGCAGAGGAGCAGCATGCTGACCTTGTGTGCTGGGCGGTCCGAA +
Preference number: 5 (lower is better)
Translates to: LSEKITIWTTAIARA*QRSSMLTLCAGRSE
Trigger: TTCGGACCGCCCAGCACACAAGGTCAGCATGCTGCTCCTCTGTCACGCTCTCGCTATAGCTGTTGTCCAGATCGTTATCTTCTCAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000442722.5
ENST00000498249.1
CDS-3UTR CAA 90 bp TCCTTTCATCATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACAGCAGCATGCTGACCTaGTGTGCTGGGCGGTCCGAA +
Preference number: 5 (lower is better)
Translates to: SFHHDSDTLPGVGTTGTHSSMLT*CAGRSE
Trigger: TTCGGACCGCCCAGCACACAAGGTCAGCATGCTGCT...GTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR CAA 90 bp GACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCCACACAGTTTTTGGCTaGTGCTTTAGAGGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: DHLLRPCQIPILSPVASCHTVFG*CFRGWS
Trigger: AGACCAGCCTCTAAAGCACAAGCCAAAAACTGTGTG...GCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGACCGTTCACACAGTTTTaGGCTTGTGCTTTAGAGGCT +
Preference number: 5 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGPFTQF*ACALEA
Trigger: AGCCTCTAAAGCACAAGCCAAAAACTGTGTGAACGG...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTCCACTGGCTTTCGCCTaGAGGTCCAATGTGCACTCT +
Preference number: 5 (lower is better)
Translates to: PVASCGNILSKQTTGFRLPLAFA*RSNVHS
Trigger: AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGG...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp AAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCCCACTGGCTTTCGCCTaGAGGTCCAATGTGCACTCT +
Preference number: 5 (lower is better)
Translates to: KQTTGFRLEVQCALFTKCPLAFA*RSNVHS
Trigger: AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGG...GCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCCCACTGGCTTTCGCCTaGAGGTCCAATGTGCACTCT +
Preference number: 5 (lower is better)
Translates to: ILSPVASCGNILSKQTTGPLAFA*RSNVHS
Trigger: AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGG...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp TTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCAAGCAGCATGCTGACCTaGTGTGCTGGGCGGTCCGAA +
Preference number: 5 (lower is better)
Translates to: FYPSKPLAFALRSNVHSSSSMLT*CAGRSE
Trigger: TTCGGACCGCCCAGCACACAAGGTCAGCATGCTGCT...TGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTAGCAGCATGCTGACCTaGTGTGCTGGGCGGTCCGAA +
Preference number: 5 (lower is better)
Translates to: TFYPSKPLAFALRSNVHSSSMLT*CAGRSE
Trigger: TTCGGACCGCCCAGCACACAAGGTCAGCATGCTGCT...AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGATTTTGTGGACACCATTaGTCTTCTGCCCATCGATTG +
Preference number: 5 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGFCGHH*SSAHRL
Trigger: CAATCGATGGGCAGAAGACAAATGGTGTCCACAAAA...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp AAGTCAGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCCTGGAGGCACACTTTTaGGTGATGGATGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: KSDHLLRPCQIPILSPVALEAHF*VMDVLL
Trigger: AAGAAGCACATCCATCACCAAAAAGTGTGCCTCCAG...GGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp AAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGACCACTGGCTTTCGCCTaGAGGTCCAATGTGCACTCT +
Preference number: 5 (lower is better)
Translates to: KPLAFALRSNVHSSPSARPLAFA*RSNVHS
Trigger: AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGG...TCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS TCA 90 bp CACCCCATTCCCTCAGTGACTGCGGCTAGCTGGTTTCCTCTGTGCTaGATCACTGGATTTCTCAAATCAACCGTGGTTCTGAGGCATGTT +
Preference number: 5 (lower is better)
Translates to: HPIPSVTAASWFPLC*ITGFLKSTVVLRHV
Trigger: AACATGCCTCAGAACCACGGTTGATTTGAGAAATCCAGTGATTCAGCACAGAGGAAACCAGCTAGCCGCAGTCACTGAGGGAATGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498249.1
CDS CCA 90 bp AAAAACGAAGCATTCGCAGTTCCCTTGAGGGTTCCAGATGTTCCCTaGTTTGGGCTCATTCCTGCTCGCCTTGTCACCTGCTACATTGGA +
Preference number: 5 (lower is better)
Translates to: KNEAFAVPLRVPDVP*FGLIPARLVTCYIG
Trigger: TCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCAAACCAGGGAACATCTGGAACCCTCAAGGGAACTGCGAATGCTTCGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS-3UTR CAA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAGTGGGTAATTCTACATaGCAGATCATTCCTTCACAG +
Preference number: 5 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGVGNST*QIIPSQ
Trigger: CTGTGAAGGAATGATCTGCAATGTAGAATTACCCAC...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp GACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCTCACCAAGTGCAAGATaGATCTTCACTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: DHLLRPCQIPILSPVASCSPSAR*IFTPKF
Trigger: GAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGA...GCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGATCACCAAGTGCAAGATaGATCTTCACTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: IFSGPAKFPSSVLWPHAGSPSAR*IFTPKF
Trigger: GAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGA...TCCCGCATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCAGAAGGAGAATGTGGTaGTCAGGCTCCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: ILSPVASCGNILSKQTTGRRRMW*SGSSLE
Trigger: TTCCAGAGAGGAGCCTGACAACCACATTCTCCTTCT...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409642.8
CDS-3UTR CAA 90 bp AGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCTCATGTCACCAAGTGCAAGATaGATCTTCACTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: RPSSQALPNSHPQSCGLMSPSAR*IFTPKF
Trigger: GAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGA...CATGAGGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp TCTGGAGCCAGGCGACCTCCTGAGACGTTACGGAATATATCCTCTGTCACCATTGCTTCATGTTGTTCATaGACGTTGCCTGAGATCCTG +
Preference number: 5 (lower is better)
Translates to: SGARRPPETLRNISSVTIASCCS*TLPEIL
Trigger: CAGGATCTCAGGCAACGTCAATGAACAACATGAAGC...AATGGTGACAGAGGATATATTCCGTAACGTCTCAGGAGGTCGCCTGGCTCCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR CAA 90 bp AAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCTTTTGTGGACACCATTaGTCTTCTGCCCATCGATTG +
Preference number: 5 (lower is better)
Translates to: KQTTGFRLEVQCALFTKCFCGHH*SSAHRL
Trigger: CAATCGATGGGCAGAAGACAAATGGTGTCCACAAAA...GCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTTTTTGTGGACACCATTaGTCTTCTGCCCATCGATTG +
Preference number: 5 (lower is better)
Translates to: PVASCGNILSKQTTGFRLFCGHH*SSAHRL
Trigger: CAATCGATGGGCAGAAGACAAATGGTGTCCACAAAA...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp AAGTCAGACCATCTTCTCAGGCCCTGCCAAATTCCCATCCTCAGTCCTGTGGCCACAGTACTGTGTATTTaGTGGACACCATTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: KSDHLLRPCQIPILSPVATVLCI*WTPFVF
Trigger: GAAGACAAATGGTGTCCACAAAATACACAGTACTGT...GGCCACAGGACTGAGGATGGGAATTTGGCAGGGCCTGAGAAGATGGTCTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCGTGGGTAATTCTACATaGCAGATCATTCCTTCACAG +
Preference number: 5 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFVGNST*QIIPSQ
Trigger: CTGTGAAGGAATGATCTGCAATGTAGAATTACCCAC...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCTCACCAAGTGCAAGATaGATCTTCACTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFSPSAR*IFTPKF
Trigger: GAACTTTGGAGTGAAGATCAATCTTGCACTTGGTGA...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTCATTGACTATGCTGTaGGTGGGGAAAACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: ILSPVASCGNILSKQTTGSLTML*VGKTAF
Trigger: GAAAGCAGTTTTCCCCACCAACAGCATAGTCAATGA...GCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCCCGAACTCTTATATCTaGAGAAGGAGAATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFPNSYI*RRRMWL
Trigger: CAACCACATTCTCCTTCTCAAGATATAAGAGTTCGG...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409642.8
CDS TCA 90 bp CACTCCGTATGTTCAGAATCTCGGCTGTGGTGGCAACCGACAAAATaGCATTCACTTCTGGAGGCACACTTTTTGGTGATGGATGTGCTT +
Preference number: 5 (lower is better)
Translates to: HSVCSESRLWWQPTK*HSLLEAHFLVMDVL
Trigger: AAGCACATCCATCACCAAAAAGTGTGCCTCCAGAAGTGAATGTCATTTTGTCGGTTGCCACCACAGCCGAGATTCTGAACATACGGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000498249.1
CDS GCA 90 bp TTGATCTTCACTCCAAAGTTCACCGTTCACACAGTTTTTGGCTTGTaGTTTAGAGGCTGGTCTCTGCCTCTCCTAGGAATGGTGGCATCA +
Preference number: 5 (lower is better)
Translates to: LIFTPKFTVHTVFGL*FRGWSLPLLGMVAS
Trigger: TGATGCCACCATTCCTAGGAGAGGCAGAGACCAGCCTCTAAAGCACAAGCCAAAAACTGTGTGAACGGTGAACTTTGGAGTGAAGATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000498249.1
CDS-3UTR CAA 90 bp AAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCACCAAGTGCAAGATTTTGTGGACACCATTaGTCTTCTGCCCATCGATTG +
Preference number: 5 (lower is better)
Translates to: KPLAFALRSNVHSSPSARFCGHH*SSAHRL
Trigger: CAATCGATGGGCAGAAGACAAATGGTGTCCACAAAA...TCTTGCACTTGGTGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp GAGGGTTTGACCTGGCAGCCTCTGAGGCAGTCAAGGAGGTCAAGAAATCCTTTCACAGTACTGTGTATTTaGTGGACACCATTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: EGLTWQPLRQSRRSRNPFTVLCI*WTPFVF
Trigger: GAAGACAAATGGTGTCCACAAAATACACAGTACTGT...GAAAGGATTTCTTGACCTCCTTGACTGCCTCAGAGGCTGCCAGGTCAAACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp TCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACGTGGGTAATTCTACATaGCAGATCATTCCTTCACAG +
Preference number: 5 (lower is better)
Translates to: SHPQSCGLMREHFIQANHVGNST*QIIPSQ
Trigger: CTGTGAAGGAATGATCTGCAATGTAGAATTACCCAC...GTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp AGTCTGAGCTCGGATAATCATCTCATCCAACGTGTGGCATTTTACACTCTCTGGTGTTGTTCATTGACGTaGCCTGAGATCCTGCTCGCA +
Preference number: 5 (lower is better)
Translates to: SLSSDNHLIQRVAFYTLWCCSLT*PEILLA
Trigger: TGCGAGCAGGATCTCAGGCAACGTCAATGAACAACA...CCAGAGAGTGTAAAATGCCACACGTTGGATGAGATGATTATCCGAGCTCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS TCA 90 bp CTGAATCACTGGATTTCTCAAATCAACCGTGGTTCTGAGGCATGTTaGGCCAAAGTCACTGGACCACCTATCTGTCAGTTCCATTCCTTG +
Preference number: 5 (lower is better)
Translates to: LNHWISQINRGSEAC*AKVTGPPICQFHSL
Trigger: CAAGGAATGGAACTGACAGATAGGTGGTCCAGTGACTTTGGCTCAACATGCCTCAGAACCACGGTTGATTTGAGAAATCCAGTGATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498249.1
CDS TCA 90 bp TTCCTCTGTGCTGAATCACTGGATTTCTCAAATCAACCGTGGTTCTaGGGCATGTTGAGCCAAAGTCACTGGACCACCTATCTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: FLCAESLDFSNQPWF*GMLSQSHWTTYLSV
Trigger: AACTGACAGATAGGTGGTCCAGTGACTTTGGCTCAACATGCCTCAGAACCACGGTTGATTTGAGAAATCCAGTGATTCAGCACAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498249.1
CDS CCA 90 bp CTCAGAGTAATCAGCCCAATTATGCTGAGTGCCGTGGCTGTCCACTaGCTTGAGAGACTTAGAAAAACCACAGAATCCTTTCTTTGCCAA +
Preference number: 5 (lower is better)
Translates to: LRVISPIMLSAVAVH*LERLRKTTESFLCQ
Trigger: TTGGCAAAGAAAGGATTCTGTGGTTTTTCTAAGTCTCTCAAGCCAGTGGACAGCCACGGCACTCAGCATAATTGGGCTGATTACTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473975.5
ENST00000498249.1
CDS-3UTR CAA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTACAGTACTGTGTATTTaGTGGACACCATTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: PVASCGNILSKQTTGFRLTVLCI*WTPFVF
Trigger: GAAGACAAATGGTGTCCACAAAATACACAGTACTGT...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTCTGGAGGCACACTTTTaGGTGATGGATGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: TFYPSKPLAFALRSNVHSLEAHF*VMDVLL
Trigger: AAGAAGCACATCCATCACCAAAAAGTGTGCCTCCAG...AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTCACACAGTTTTTGGCTaGTGCTTTAGAGGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: TFYPSKPLAFALRSNVHSHTVFG*CFRGWS
Trigger: AGACCAGCCTCTAAAGCACAAGCCAAAAACTGTGTG...AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCATTGACTATGCTGTaGGTGGGGAAAACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: GTFYPSKPLAFALRSNVHSLTML*VGKTAF
Trigger: GAAAGCAGTTTTCCCCACCAACAGCATAGTCAATGA...GTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS TCA 90 bp ATATTTACGGGGCACCTACAATGTGTCAGGCTTCATGTTGTTCATTaGCGTTGCCTGAGATCCTGCTCGCAGGGAATCTTACTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: IFTGHLQCVRLHVVH*RCLRSCSQGILLSN
Trigger: ATTGGAAAGTAAGATTCCCTGCGAGCAGGATCTCAGGCAACGTCAATGAACAACATGAAGCCTGACACATTGTAGGTGCCCCGTAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450639.5
CDS TCA 90 bp CTTGGCTGGTGCCCTTGGGCAGTGATCAATAGACACAACTATACATaGTGGTTTGCCAAGCATTACTTAAGCCGCAGCATTTTCACTAGT +
Preference number: 5 (lower is better)
Translates to: LGWCPWAVINRHNYT*WFAKHYLSRSIFTS
Trigger: ACTAGTGAAAATGCTGCGGCTTAAGTAATGCTTGGCAAACCATCATGTATAGTTGTGTCTATTGATCACTGCCCAAGGGCACCAGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS-3UTR CAA 90 bp CCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTTCACAAGTAAAGCACTaGAAGCTATTTGGAAATGGT +
Preference number: 5 (lower is better)
Translates to: PVASCGNILSKQTTGFRLSQVKH*KLFGNG
Trigger: ACCATTTCCAAATAGCTTCAAGTGCTTTACTTGTGA...AAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp ACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCATTGACTATGCTGTaGGTGGGGAAAACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: TFYPSKPLAFALRSNVHSSLTML*VGKTAF
Trigger: GAAAGCAGTTTTCCCCACCAACAGCATAGTCAATGA...AGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS TCA 90 bp CCTCACATTATAGAAGTTGATGTTCTTGGCAAATGCCCAGCTTTCTaGGAAGATAACGATCTGGACAACAGCTATAGCGAGAGCGTGACA +
Preference number: 5 (lower is better)
Translates to: PHIIEVDVLGKCPAF*EDNDLDNSYSESVT
Trigger: TGTCACGCTCTCGCTATAGCTGTTGTCCAGATCGTTATCTTCTCAGAAAGCTGGGCATTTGCCAAGAACATCAACTTCTATAATGTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000442722.5
ENST00000498249.1
CDS-3UTR CAA 90 bp GAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTTGGTGGGGAAACACACAGTTTTTGGCTaGTGCTTTAGAGGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: EVFFVQLPFSLTMLLVGKHTVFG*CFRGWS
Trigger: AGACCAGCCTCTAAAGCACAAGCCAAAAACTGTGTG...TTTCCCCACCAACAGCATAGTCAATGAGAAAGGCAACTGTACGAAGAAAACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp GGAACATTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACGTTTTCTTCGTACAGTaGCCTTTCTCATTGACTATG +
Preference number: 5 (lower is better)
Translates to: GTFYPSKPLAFALRSNVHVFFVQ*PFSLTM
Trigger: CATAGTCAATGAGAAAGGCAACTGTACGAAGAAAAC...GTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp TTCATCATGATTCTGATACTCTTCCAGGCGTGGGAACTACAGGTACCCACATGTAAATGGTGTAGCCTCTaGACTGTTAAATCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: FIMILILFQAWELQVPTCKWCSL*TVKSLE
Trigger: CTCCAGAGATTTAACAGTCAAGAGGCTACACCATTT...ACATGTGGGTACCTGTAGTTCCCACGCCTGGAAGAGTATCAGAATCATGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS-3UTR CAA 90 bp TTTTATCCAAGCAAACCACTGGCTTTCGCCTTGAGGTCCAATGTGCACTCTTCAACAGTACTGTGTATTTaGTGGACACCATTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: FYPSKPLAFALRSNVHSSTVLCI*WTPFVF
Trigger: GAAGACAAATGGTGTCCACAAAATACACAGTACTGT...TGAAGAGTGCACATTGGACCTCAAGGCGAAAGCCAGTGGTTTGCTTGGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp AAATTCCCATCCTCAGTCCTGTGGCCTCATGCGGGAACATTTTATCCAAGCAAAGTTTTCTTCGTACAGTaGCCTTTCTCATTGACTATG +
Preference number: 5 (lower is better)
Translates to: KFPSSVLWPHAGTFYPSKVFFVQ*PFSLTM
Trigger: CATAGTCAATGAGAAAGGCAACTGTACGAAGAAAAC...TTTGCTTGGATAAAATGTTCCCGCATGAGGCCACAGGACTGAGGATGGGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp GAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTTGGTGGGGAAAGTGGGTAATTCTACATaGCAGATCATTCCTTCACAG +
Preference number: 5 (lower is better)
Translates to: EVFFVQLPFSLTMLLVGKVGNST*QIIPSQ
Trigger: CTGTGAAGGAATGATCTGCAATGTAGAATTACCCAC...TTTCCCCACCAACAGCATAGTCAATGAGAAAGGCAACTGTACGAAGAAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS GCA 90 bp ACACCATTTGTCTTCTGCCCATCGATTGCAGTTATAATTATCCCCTaGGTTTTCACAAGTAAAGCACTTGAAGCTATTTGGAAATGGTGT +
Preference number: 5 (lower is better)
Translates to: TPFVFCPSIAVIIIP*VFTSKALEAIWKWC
Trigger: ACACCATTTCCAAATAGCTTCAAGTGCTTTACTTGTGAAAACGCAGGGGATAATTATAACTGCAATCGATGGGCAGAAGACAAATGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000498249.1
CDS-3UTR CAA 90 bp GCAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCCGTTCACACAGTTTTaGGCTTGTGCTTTAGAGGCT +
Preference number: 5 (lower is better)
Translates to: ANRFHISSTGSFLRTVAFPFTQF*ACALEA
Trigger: AGCCTCTAAAGCACAAGCCAAAAACTGTGTGAACGG...AAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCCCGTTCACACAGTTTTaGGCTTGTGCTTTAGAGGCT +
Preference number: 5 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFPFTQF*ACALEA
Trigger: AGCCTCTAAAGCACAAGCCAAAAACTGTGTGAACGG...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS-3UTR CAA 90 bp TATTTCCCAAGTCTGAGCTCGGATAATCATCTCATCCAACGTGTGGCATTTTACCTGCATTTCCTTTGTTaGGTTTACTGTGATTCTCAT +
Preference number: 5 (lower is better)
Translates to: YFPSLSSDNHLIQRVAFYLHFLC*VYCDSH
Trigger: ATGAGAATCACAGTAAACCAAACAAAGGAAATGCAG...GTAAAATGCCACACGTTGGATGAGATGATTATCCGAGCTCAGACTTGGGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS-3UTR CAA 90 bp CAAATAGATTTCATATTAGTTCCACTGGAAGTTTTCTTCGTACAGTTGCCTTTCTCATTGACTATGCTGTaGGTGGGGAAAACTGCTTTC +
Preference number: 5 (lower is better)
Translates to: QIDFILVPLEVFFVQLPFSLTML*VGKTAF
Trigger: GAAAGCAGTTTTCCCCACCAACAGCATAGTCAATGA...GAAAGGCAACTGTACGAAGAAAACTTCCAGTGGAACTAATATGAAATCTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
CDS GCA 72 bp CCCTGGTTTGGGCTCATTCCTGCTCGCCTTGTCACCTaGTACATTGGAGACTGGCTCTGGCGGAGAAGCACC +
Preference number: 6 (lower is better)
Translates to: PWFGLIPARLVT*YIGDWLWRRST
Trigger: GGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCAAACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CAA 90 bp TTCCCTGGTTTGGGCTCATTCCTGCTCGCCTTGTCACCTGCTACATaGGAGACTGGCTCTGGCGGAGAAGCACCCCTTCATGGAGATGGC +
Preference number: 6 (lower is better)
Translates to: FPGLGSFLLALSPAT*ETGSGGEAPLHGDG
Trigger: GCCATCTCCATGAAGGGGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCAAACCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CCA 72 bp GCACAAAGACCCAGGCAAGCACTGGTAGGTAGAGTGTaGGGGCACTGCTGCCAGATGTTCTCTGAGCGTGCA +
Preference number: 6 (lower is better)
Translates to: AQRPRQALVGRV*GHCCQMFSERA
Trigger: TGCACGCTCAGAGAACATCTGGCAGCAGTGCCCCCACACTCTACCTACCAGTGCTTGCCTGGGTCTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000498249.1
CDS CCA 72 bp GCTCGCCTTGTCACCTGCTACATTGGAGACTGGCTCTaGCGGAGAAGCACCCCTTCATGGAGATGGCTAGGT +
Preference number: 6 (lower is better)
Translates to: ARLVTCYIGDWL*RRSTPSWRWLG
Trigger: ACCTAGCCATCTCCATGAAGGGGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CCA 72 bp TGGGCTCATTCCTGCTCGCCTTGTCACCTGCTACATTaGAGACTGGCTCTGGCGGAGAAGCACCCCTTCATG +
Preference number: 6 (lower is better)
Translates to: WAHSCSPCHLLH*RLALAEKHPFM
Trigger: CATGAAGGGGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS GCA 72 bp GAGAGCGTGACAGAGGAGCAGCATGCTGACCTTGTGTaGTGGGCGGTCCGAACTCTTATATCTGGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: ESVTEEQHADLV*WAVRTLISGQP
Trigger: AGGCTGACCAGATATAAGAGTTCGGACCGCCCAGCACACAAGGTCAGCATGCTGCTCCTCTGTCACGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473975.5
CDS CCA 72 bp ATTCCTGCTCGCCTTGTCACCTGCTACATTGGAGACTaGCTCTGGCGGAGAAGCACCCCTTCATGGAGATGG +
Preference number: 6 (lower is better)
Translates to: IPARLVTCYIGD*LWRRSTPSWRW
Trigger: CCATCTCCATGAAGGGGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CCA 72 bp GCATTCGCAGTTCCCTTGAGGGTTCCAGATGTTCCCTaGTTTGGGCTCATTCCTGCTCGCCTTGTCACCTGC +
Preference number: 6 (lower is better)
Translates to: AFAVPLRVPDVP*FGLIPARLVTC
Trigger: GCAGGTGACAAGGCGAGCAGGAATGAGCCCAAACCAGGGAACATCTGGAACCCTCAAGGGAACTGCGAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CAA 72 bp TTGGGCTCATTCCTGCTCGCCTTGTCACCTGCTACATaGGAGACTGGCTCTGGCGGAGAAGCACCCCTTCAT +
Preference number: 6 (lower is better)
Translates to: LGSFLLALSPAT*ETGSGGEAPLH
Trigger: ATGAAGGGGTGCTTCTCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CAA 72 bp CAGATGTTCCCTGGTTTGGGCTCATTCCTGCTCGCCTaGTCACCTGCTACATTGGAGACTGGCTCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: QMFPGLGSFLLA*SPATLETGSGG
Trigger: TCCGCCAGAGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCAAACCAGGGAACATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS GCA 72 bp GAGGGTTCCAGATGTTCCCTGGTTTGGGCTCATTCCTaGTCGCCTTGTCACCTGCTACATTGGAGACTGGCT +
Preference number: 6 (lower is better)
Translates to: EGSRCSLVWAHS*SPCHLLHWRLA
Trigger: AGCCAGTCTCCAATGTAGCAGGTGACAAGGCGAGCAGGAATGAGCCCAAACCAGGGAACATCTGGAACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS TCA 72 bp AAGATAACGATCTGGACAACAGCTATAGCGAGAGCGTaGCAGAGGAGCAGCATGCTGACCTTGTGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: KITIWTTAIARA*QRSSMLTLCAG
Trigger: CCCAGCACACAAGGTCAGCATGCTGCTCCTCTGTCACGCTCTCGCTATAGCTGTTGTCCAGATCGTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000442722.5
ENST00000498249.1
CDS CAA 90 bp CAGAAGGGGATTCTACTGGAGAAAAACGAAGCATTCGCAGTTCCCTaGAGGGTTCCAGATGTTCCCTGGTTTGGGCTCATTCCTGCTCGC +
Preference number: 6 (lower is better)
Translates to: QKGILLEKNEAFAVP*RVPDVPWFGLIPAR
Trigger: GCGAGCAGGAATGAGCCCAAACCAGGGAACATCTGGAACCCTCAAGGGAACTGCGAATGCTTCGTTTTTCTCCAGTAGAATCCCCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS TCA 72 bp CCCTCAGTGACTGCGGCTAGCTGGTTTCCTCTGTGCTaGATCACTGGATTTCTCAAATCAACCGTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: PSVTAASWFPLC*ITGFLKSTVVL
Trigger: CAGAACCACGGTTGATTTGAGAAATCCAGTGATTCAGCACAGAGGAAACCAGCTAGCCGCAGTCACTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498249.1
CDS CAA 72 bp GGGGCACCTACAATGTGTCAGGCTTCATGTTGTTCATaGACGTTGCCTGAGATCCTGCTCGCAGGGAATCTT +
Preference number: 6 (lower is better)
Translates to: GAPTMCQASCCS*TLPEILLAGNL
Trigger: AAGATTCCCTGCGAGCAGGATCTCAGGCAACGTCAATGAACAACATGAAGCCTGACACATTGTAGGTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450639.5
CDS TCA 72 bp GGGCACCTACAATGTGTCAGGCTTCATGTTGTTCATTaGCGTTGCCTGAGATCCTGCTCGCAGGGAATCTTA +
Preference number: 6 (lower is better)
Translates to: GHLQCVRLHVVH*RCLRSCSQGIL
Trigger: TAAGATTCCCTGCGAGCAGGATCTCAGGCAACGTCAATGAACAACATGAAGCCTGACACATTGTAGGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450639.5
CDS TCA 72 bp TTCTACTGGAGAAAAACGAAGCATTCGCAGTTCCCTTaGGGGTTCCAGATGTTCCCTGGTTTGGGCTCATTC +
Preference number: 6 (lower is better)
Translates to: FYWRKTKHSQFP*GFQMFPGLGSF
Trigger: GAATGAGCCCAAACCAGGGAACATCTGGAACCCTCAAGGGAACTGCGAATGCTTCGTTTTTCTCCAGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS GCA 72 bp GGTTGTCAGGCTCCTCTCTGGAACAGTGAAAAGGTTTaGACTCAGAGTAATCAGCCCAATTATGCTGAGTGC +
Preference number: 6 (lower is better)
Translates to: GCQAPLWNSEKV*TQSNQPNYAEC
Trigger: GCACTCAGCATAATTGGGCTGATTACTCTGAGTGCAAACCTTTTCACTGTTCCAGAGAGGAGCCTGACAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473975.5
ENST00000498249.1
CDS CAA 90 bp TACGGGGCACCTACAATGTGTCAGGCTTCATGTTGTTCATTGACGTaGCCTGAGATCCTGCTCGCAGGGAATCTTACTTTCCAATATTCA +
Preference number: 6 (lower is better)
Translates to: YGAPTMCQASCCSLT*PEILLAGNLTFQYS
Trigger: TGAATATTGGAAAGTAAGATTCCCTGCGAGCAGGATCTCAGGCAACGTCAATGAACAACATGAAGCCTGACACATTGTAGGTGCCCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450639.5
CDS TCA 72 bp TGTTCAGAATCTCGGCTGTGGTGGCAACCGACAAAATaGCATTCACTTCTGGAGGCACACTTTTTGGTGATG +
Preference number: 6 (lower is better)
Translates to: CSESRLWWQPTK*HSLLEAHFLVM
Trigger: CATCACCAAAAAGTGTGCCTCCAGAAGTGAATGTCATTTTGTCGGTTGCCACCACAGCCGAGATTCTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000498249.1
CDS TCA 72 bp TGGATTTCTCAAATCAACCGTGGTTCTGAGGCATGTTaGGCCAAAGTCACTGGACCACCTATCTGTCAGTTC +
Preference number: 6 (lower is better)
Translates to: WISQINRGSEAC*AKVTGPPICQF
Trigger: GAACTGACAGATAGGTGGTCCAGTGACTTTGGCTCAACATGCCTCAGAACCACGGTTGATTTGAGAAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498249.1
CDS GCA 72 bp TTTAAAAGCAGGCTGAAAACAAACACTCTGAAGTCCTaGTCCAGCAGAGTCCCGTCCACTACTGAATCACCA +
Preference number: 6 (lower is better)
Translates to: FKSRLKTNTLKS*SSRVPSTTESP
Trigger: TGGTGATTCAGTAGTGGACGGGACTCTGCTGGAGCAGGACTTCAGAGTGTTTGTTTTCAGCCTGCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS GCA 72 bp TCTGCCTTTGGTGAGTGCAGTTGCTCAATACAGGGATaGAGAAGGGGATTCTACTGGAGAAAAACGAAGCAT +
Preference number: 6 (lower is better)
Translates to: SAFGECSCSIQG*RRGFYWRKTKH
Trigger: ATGCTTCGTTTTTCTCCAGTAGAATCCCCTTCTGCATCCCTGTATTGAGCAACTGCACTCACCAAAGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CCA 72 bp ATCAGCCCAATTATGCTGAGTGCCGTGGCTGTCCACTaGCTTGAGAGACTTAGAAAAACCACAGAATCCTTT +
Preference number: 6 (lower is better)
Translates to: ISPIMLSAVAVH*LERLRKTTESF
Trigger: AAAGGATTCTGTGGTTTTTCTAAGTCTCTCAAGCCAGTGGACAGCCACGGCACTCAGCATAATTGGGCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473975.5
ENST00000498249.1
CDS CAA 72 bp ATTCTACTGGAGAAAAACGAAGCATTCGCAGTTCCCTaGAGGGTTCCAGATGTTCCCTGGTTTGGGCTCATT +
Preference number: 6 (lower is better)
Translates to: ILLEKNEAFAVP*RVPDVPWFGLI
Trigger: AATGAGCCCAAACCAGGGAACATCTGGAACCCTCAAGGGAACTGCGAATGCTTCGTTTTTCTCCAGTAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS CAA 90 bp AATATTTACGGGGCACCTACAATGTGTCAGGCTTCATGTTGTTCATaGACGTTGCCTGAGATCCTGCTCGCAGGGAATCTTACTTTCCAA +
Preference number: 6 (lower is better)
Translates to: NIYGAPTMCQASCCS*TLPEILLAGNLTFQ
Trigger: TTGGAAAGTAAGATTCCCTGCGAGCAGGATCTCAGGCAACGTCAATGAACAACATGAAGCCTGACACATTGTAGGTGCCCCGTAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450639.5
CDS TCA 72 bp ACTTGTGGTCGAGAGGAGGCCTCACATTATAGAAGTTaGTGTTCTTGGCAAATGCCCAGCTTTCTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: TCGREEASHYRS*CSWQMPSFLRR
Trigger: TCTTCTCAGAAAGCTGGGCATTTGCCAAGAACATCAACTTCTATAATGTGAGGCCTCCTCTCGACCACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442722.5
CDS GCA 72 bp CTGAGTAATCAGCTGAATTTGGAGGTATGCCTCTTTTaGCGAAGGCACACACTTCAAAGCCACTCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: LSNQLNLEVCLF*RRHTLQSHSLQ
Trigger: TTGAAGAGAGTGGCTTTGAAGTGTGTGCCTTCGGCAAAAGAGGCATACCTCCAAATTCAGCTGATTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS TCA 72 bp AATGTGTCAGGCTTCATGTTGTTCATTGACGTTGCCTaGGATCCTGCTCGCAGGGAATCTTACTTTCCAATA +
Preference number: 6 (lower is better)
Translates to: NVSGFMLFIDVA*DPARRESYFPI
Trigger: TATTGGAAAGTAAGATTCCCTGCGAGCAGGATCTCAGGCAACGTCAATGAACAACATGAAGCCTGACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437627.5
ENST00000450639.5
CDS TCA 72 bp TGCCCTTGGGCAGTGATCAATAGACACAACTATACATaGTGGTTTGCCAAGCATTACTTAAGCCGCAGCATT +
Preference number: 6 (lower is better)
Translates to: CPWAVINRHNYT*WFAKHYLSRSI
Trigger: AATGCTGCGGCTTAAGTAATGCTTGGCAAACCATCATGTATAGTTGTGTCTATTGATCACTGCCCAAGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473800.1
CDS TCA 72 bp ATAGAAGTTGATGTTCTTGGCAAATGCCCAGCTTTCTaGGAAGATAACGATCTGGACAACAGCTATAGCGAG +
Preference number: 6 (lower is better)
Translates to: IEVDVLGKCPAF*EDNDLDNSYSE
Trigger: CTCGCTATAGCTGTTGTCCAGATCGTTATCTTCTCAGAAAGCTGGGCATTTGCCAAGAACATCAACTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000442722.5
ENST00000498249.1
CDS GCA 72 bp GTCTTCTGCCCATCGATTGCAGTTATAATTATCCCCTaGGTTTTCACAAGTAAAGCACTTGAAGCTATTTGG +
Preference number: 6 (lower is better)
Translates to: VFCPSIAVIIIP*VFTSKALEAIW
Trigger: CCAAATAGCTTCAAGTGCTTTACTTGTGAAAACGCAGGGGATAATTATAACTGCAATCGATGGGCAGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280115.8
ENST00000409029.5
ENST00000409642.8
ENST00000409876.5
ENST00000498249.1
CDS CAA 90 bp CTTAGACTAATTAGAATGTGTCAGGCTTCATGTTGTTCATTGACGTaGCCTGAGATCCTGCTCGCAGGGAATCTTACTTTCCAATATTCA +
Preference number: 6 (lower is better)
Translates to: LRLIRMCQASCCSLT*PEILLAGNLTFQYS
Trigger: TGAATATTGGAAAGTAAGATTCCCTGCGAGCAGGATCTCAGGCAACGTCAATGAACAACATGAAGCCTGACACATTCTAATTAGTCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437627.5
CDS CAA 90 bp ATTTTCCTTAGACTAATTAGAATGTGTCAGGCTTCATGTTGTTCATaGACGTTGCCTGAGATCCTGCTCGCAGGGAATCTTACTTTCCAA +
Preference number: 6 (lower is better)
Translates to: IFLRLIRMCQASCCS*TLPEILLAGNLTFQ
Trigger: TTGGAAAGTAAGATTCCCTGCGAGCAGGATCTCAGGCAACGTCAATGAACAACATGAAGCCTGACACATTCTAATTAGTCTAAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437627.5