RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYPD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000187123

Ensembl transcript IDs: ENST00000334166.9, ENST00000392854.4, ENST00000409381.5, ENST00000414420.5, ENST00000418762.5, ENST00000651933.1

Found 559 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTaGATCTGCACCACTGTGGACCTGATCCCTCTACACCAGCCAGGG +
Preference number: 1 (lower is better)
Translates to: QQHLCRVCKHSLGGG*ICTTVDLIPLHQPG
Trigger: CCCTGGCTGGTGTAGAGGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CCA 90 bp CATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTaGTTGAATCTGCACCACTGTGGACCTGATCCCTCTACACCAGCC +
Preference number: 1 (lower is better)
Translates to: HAATSMQSLQALPGW*LNLHHCGPDPSTPA
Trigger: GGCTGGTGTAGAGGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 90 bp CACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTaGAGCCAGTGGATAAGCACTCTTCCAGTGGGACACAGCGTTTGG +
Preference number: 1 (lower is better)
Translates to: HNKKCRPCGLHARSL*SQWISTLPVGHSVW
Trigger: CCAAACGCTGTGTCCCACTGGAAGAGTGCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR CCA 90 bp ACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTaGTGGTTGAATCTGCACCACTGTGGACCTGATCCCTCTACACCA +
Preference number: 1 (lower is better)
Translates to: THAATSMQSLQALPG*WLNLHHCGPDPSTP
Trigger: TGGTGTAGAGGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 90 bp AAGTCACTGGGGATTTGGAAGTGGGAGCTCTTTGGCAGTATGAACTaGAGATGGAGTAAGAAGCTGGCTGAGCCACTTAGTCGGCCCTCA +
Preference number: 1 (lower is better)
Translates to: KSLGIWKWELFGSMN*RWSKKLAEPLSRPS
Trigger: TGAGGGCCGACTAAGTGGCTCAGCCAGCTTCTTACTCCATCTGCAGTTCATACTGCCAAAGAGCTCCCACTTCCAAATCCCCAGTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 90 bp TCAAGAGAATTAAACACTGCCATTCTGACAGGCACATGGGACACATaGAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: SRELNTAILTGTWDT*SNIYAESASTPWVV
Trigger: CACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CCA 90 bp TGCACCACTGTGGACCTGATCCCTCTACACCAGCCAGGGAGGCTTTaGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGTACT +
Preference number: 1 (lower is better)
Translates to: CTTVDLIPLHQPGRL*CGHFLVSYSITCST
Trigger: AGTACTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGCTGGTGTAGAGGGATCAGGTCCACAGTGGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR TCA 90 bp TTGGGGCTCTGGACACAATTGACTCAGGTGGAATCTAGGATCTCATaGAGCATAATTAGGTGCCAAGTCAAGGAGAAGGCTGATCTCACC +
Preference number: 1 (lower is better)
Translates to: LGLWTQLTQVESRIS*SIIRCQVKEKADLT
Trigger: GGTGAGATCAGCCTTCTCCTTGACTTGGCACCTAATTATGCTTCATGAGATCCTAGATTCCACCTGAGTCAATTGTGTCCAGAGCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATaGAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACA +
Preference number: 1 (lower is better)
Translates to: SVVSHMCNYCQANDS*RSVDHRDPHGSLLT
Trigger: TGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR TCA 90 bp AAGCAGGACACTATCACTGACATACAGCGTGGGTGCCCATTTGTCTaGTTTATAGGTGACGTCGTGGCAAATGTGGCATCAGTTTCATTT +
Preference number: 1 (lower is better)
Translates to: KQDTITDIQRGCPFV*FIGDVVANVASVSF
Trigger: AAATGAAACTGATGCCACATTTGCCACGACGTCACCTATAAATCAGACAAATGGGCACCCACGCTGTATGTCAGTGATAGTGTCCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR GCA 90 bp TCTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTaGCTCGTATATACCTTGAGACATAGTACCACAACTTTTGACCAT +
Preference number: 1 (lower is better)
Translates to: SGLVLLDGGSKLSPH*LVYTLRHSTTTFDH
Trigger: ATGGTCAAAAGTTGTGGTACTATGTCTCAAGGTATATACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR CCA 90 bp AACTTTCTTTCAAGAGAATTAAACACTGCCATTCTGACAGGCACATaGGACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCC +
Preference number: 1 (lower is better)
Translates to: NFLSRELNTAILTGT*DTCSNIYAESASTP
Trigger: GGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGAAAGAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR TCA 90 bp TATGAAGGGATAACAGCCACTTTATGGACAGTGGCTCCATTAAGTTaGGGAAAATCCTCCTCCAGGCACCCCCACAAATATAACAAACTT +
Preference number: 1 (lower is better)
Translates to: YEGITATLWTVAPLS*GKSSSRHPHKYNKL
Trigger: AAGTTTGTTATATTTGTGGGGGTGCCTGGAGGAGGATTTTCCTCAACTTAATGGAGCCACTGTCCATAAAGTGGCTGTTATCCCTTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR TCA 90 bp TTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTATATACCTTaGGACATAGTACCACAACTTTTGACCATGCACGATGAAAAATGT +
Preference number: 1 (lower is better)
Translates to: LMEAPNCLLIASYIP*DIVPQLLTMHDEKC
Trigger: ACATTTTTCATCGTGCATGGTCAAAAGTTGTGGTACTATGTCTCAAGGTATATACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR GCA 90 bp TGCAATCACCTCACTGGTCTACTTTCTCCTCATCATCGCATATTATaGCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCT +
Preference number: 1 (lower is better)
Translates to: CNHLTGLLSPHHRIL*LASPSFERQFNAES
Trigger: AGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGCGATGATGAGGAGAAAGTAGACCAGTGAGGTGATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CCA 90 bp AGAACTACTTCTTGGAATGAAAACAAACGTTTATGGTATGGAACTTaGGCTGTACTGACAGAAGGCTTTGATGAGTCTCGGTTAGACTCA +
Preference number: 1 (lower is better)
Translates to: RTTSWNENKRLWYGT*AVLTEGFDESRLDS
Trigger: TGAGTCTAACCGAGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTTGTTTTCATTCCAAGAAGTAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR TCA 90 bp AAATGTGATTCCCAGCACTGGGAGAAGAATGTTGGGAAAATTAATTaGACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGAC +
Preference number: 1 (lower is better)
Translates to: KCDSQHWEKNVGKIN*TNGWNCWNYYSSRD
Trigger: GTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAATTAATTTTCCCAACATTCTTCTCCCAGTGCTGGGAATCACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CCA 90 bp CTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAACGTTTATaGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCT +
Preference number: 1 (lower is better)
Translates to: LDKCRTTSWNENKRL*YGTWAVLTEGFDES
Trigger: AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 90 bp AACATACTCCTAATATCTTACAGTCTCAGGACCTACTGCATCTCATaGATGTATTCTTCCAAATTAAGAACCCCAGATCTCGATAAATGC +
Preference number: 1 (lower is better)
Translates to: NILLISYSLRTYCIS*MYSSKLRTPDLDKC
Trigger: GCATTTATCGAGATCTGGGGTTCTTAATTTGGAAGAATACATGCATGAGATGCAGTAGGTCCTGAGACTGTAAGATATTAGGAGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CCA 90 bp TCCAAATTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTaGAATGAAAACAAACGTTTATGGTATGGAACTTGGGCTGTACTG +
Preference number: 1 (lower is better)
Translates to: SKLRTPDLDKCRTTS*NENKRLWYGTWAVL
Trigger: CAGTACAGCCCAAGTTCCATACCATAAACGTTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAATTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 90 bp TCATGCATGTATTCTTCCAAATTAAGAACCCCAGATCTCGATAAATaGAGAACTACTTCTTGGAATGAAAACAAACGTTTATGGTATGGA +
Preference number: 1 (lower is better)
Translates to: SCMYSSKLRTPDLDK*RTTSWNENKRLWYG
Trigger: TCCATACCATAAACGTTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAATTTGGAAGAATACATGCATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CAA 90 bp GCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTaGAATCTGCACCACTGTGGACCTGATCCCTCTACACCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: AATSMQSLQALPGWW*NLHHCGPDPSTPAR
Trigger: CCTGGCTGGTGTAGAGGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCAGCAAGAGGGATGAATaGGGAAGCCAAACCCCTACT +
Preference number: 2 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPSKRDE*GSQTPT
Trigger: AGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCT...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCCCATCGAGATCCCCATaGATCGCTATTAACACATGG +
Preference number: 2 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPPSRSP*IAINTW
Trigger: CCATGTGTTAATAGCGATCCATGGGGATCTCGATGG...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATGGACACAGCGTTTGGTaGCTGAGATACTGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDGHSVW*LRYCFL
Trigger: CAGGAAACAGTATCTCAGTCACCAAACGCTGTGTCC...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR GCA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATCATGGTAAGTGGCAATaGTTGGCTGTGATGACCTCC +
Preference number: 2 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDHGKWQ*LAVMTS
Trigger: GGAGGTCATCACAGCCAAGCATTGCCACTTACCATG...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR TCA 90 bp AAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATAAGCACAGCGTTTGGTGACTaGGATACTGTTTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: KCRPCGLHARSLCSQWISTAFGD*DTVSCD
Trigger: GTCACAGGAAACAGTATCTCAGTCACCAAACGCTGT...GCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR TCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCAGAAAAACTTCCCATTaGGTCTCCTTGTTAGTCTTG +
Preference number: 2 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPRKTSH*VSLLVL
Trigger: CAAGACTAACAAGGAGACTCAATGGGAAGTTTTTCT...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATAGATACTGTTTCCTGTaGCTTCCATTGTGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDRYCFL*LPLCAE
Trigger: CTCAGCACACAATGGAAGTCACAGGAAACAGTATCT...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCAATGGCTGGAATTGTTaGAATTACTACTCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPNGWNC*NYYSSR
Trigger: CCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATT...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCATAACAGCCACTTTATaGACAGTGGCTCCATTAAGT +
Preference number: 2 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPITATL*TVAPLS
Trigger: ACTTAATGGAGCCACTGTCCATAAAGTGGCTGTTAT...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp GGTGACGTCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTAAGTCTCTGCAGCCAGTaGATAAGCACTCTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: GDVVANVASVSFRGSGKLSLCSQ*ISTLPV
Trigger: CACTGGAAGAGTGCTTATCCACTGGCTGCAGAGACT...TAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGACGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR TCA 90 bp ATGGAGCCACTGAGCCACTATAACATGAGCCCTAACCACAACCACAAGCAGGACTCTGTGAAATCTTCCTaGTCTTCCTCCCAACCAGGT +
Preference number: 2 (lower is better)
Translates to: MEPLSHYNMSPNHNHKQDSVKSS*SSSQPG
Trigger: ACCTGGTTGGGAGGAAGATCAGGAAGATTTCACAGA...GTCCTGCTTGTGGTTGTGGTTAGGGCTCATGTTATAGTGGCTCAGTGGCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR TCA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATGCCTCGTATATACCTTaGGACATAGTACCACAACTT +
Preference number: 2 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDASYIP*DIVPQL
Trigger: AAGTTGTGGTACTATGTCTCAAGGTATATACGAGGC...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR TCA 90 bp ATGGAGCCACTGAGCCACTATAACATGAGCCCTAACCACAACCACAAGCAGGACTGTCTGATTTATAGGTaGCGTCGTGGCAAATGTGGC +
Preference number: 2 (lower is better)
Translates to: MEPLSHYNMSPNHNHKQDCLIYR*RRGKCG
Trigger: GCCACATTTGCCACGACGTCACCTATAAATCAGACA...GTCCTGCTTGTGGTTGTGGTTAGGGCTCATGTTATAGTGGCTCAGTGGCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CCA 90 bp AGCCAGAGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTCTGGGGATTTGGAAGTaGGAGCTCTTTGGCAGTATG +
Preference number: 2 (lower is better)
Translates to: SQRHFSMEGRWTLTTLSSLGIWK*ELFGSM
Trigger: CATACTGCCAAAGAGCTCCCACTTCCAAATCCCCAG...AGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCTCTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGACGTCGTGGCAAATGTaGCATCAGTTTCATTTCGGG +
Preference number: 2 (lower is better)
Translates to: SVDHRDPHGSLLTHGATETSWQM*HQFHFG
Trigger: CCCGAAATGAAACTGATGCCACATTTGCCACGACGT...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR TCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGAGATACTGTTTCCTGTaGCTTCCATTGTGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: SVDHRDPHGSLLTHGATERYCFL*LPLCAE
Trigger: CTCAGCACACAATGGAAGTCACAGGAAACAGTATCT...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR GCA 90 bp CTTTCAAGAGAATTAAACACTGCCATTCTGACAGGCACATGGGACACATGCAGCCAGGCCAATGACTCATaGAGGTCTGTGGACCATCGA +
Preference number: 2 (lower is better)
Translates to: LSRELNTAILTGTWDTCSQANDS*RSVDHR
Trigger: TCGATGGTCCACAGACCTGCATGAGTCATTGGCCTG...GCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCACCTACTGCATCTCATaGATGTATTCTTCCAAATTA +
Preference number: 2 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPTYCIS*MYSSKL
Trigger: TAATTTGGAAGAATACATGCATGAGATGCAGTAGGT...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCCTGTATCAGAGTTACTaGTGTCAGTTCATATTTAGT +
Preference number: 2 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPLYQSY*CQFIFS
Trigger: ACTAAATATGAACTGACAGCAGTAACTCTGATACAG...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCTATAGCATCTTTAGATaGAACATCAACTATCTCCTC +
Preference number: 2 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPYSIFR*NINYLL
Trigger: GAGGAGATAGTTGATGTTGCATCTAAAGATGCTATA...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp CTTTCAAGAGAATTAAACACTGCCATTCTGACAGGCACATGGGACACATGCAGCCATCTATGCAGAGTCTaGAAGCACTCCCTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: LSRELNTAILTGTWDTCSHLCRV*KHSLGG
Trigger: ACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATG...GCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGCTTCACAACAAGAAGTaGAGACCTTGTGGCCTTCAT +
Preference number: 2 (lower is better)
Translates to: SVDHRDPHGSLLTHGATELHNKK*RPCGLH
Trigger: ATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAG...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGTTATGGTATGGAACTTaGGCTGTACTGACAGAAGGC +
Preference number: 2 (lower is better)
Translates to: SVDHRDPHGSLLTHGATELWYGT*AVLTEG
Trigger: GCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAA...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR CCA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCGAAGTGGGAGCTCTTTaGCAGTATGAACTGCAGATG +
Preference number: 2 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPEVGAL*QYELQM
Trigger: CATCTGCAGTTCATACTGCCAAAGAGCTCCCACTTC...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTATCACATGCAGTACTTaGAAGATGTCAGTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: DTCSNIYAESASTPWVVVITCST*KMSVEC
Trigger: ACACTCCACTGACATCTTCCAAGTACTGCATGTGAT...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp GTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTATATACCTTGGAACTTGGGCTGTACTaGCAGAAGGCTTTGATGAGT +
Preference number: 2 (lower is better)
Translates to: VLLDGGSKLSPHCLVYTLELGLY*QKALMS
Trigger: ACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTC...CAAGGTATATACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR GCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACCAGGCCAATGACTCATaGAGGTCTGTGGACCATCGA +
Preference number: 2 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDQANDS*RSVDHR
Trigger: TCGATGGTCCACAGACCTGCATGAGTCATTGGCCTG...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR GCA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGCATGGTAAGTGGCAATaGTTGGCTGTGATGACCTCC +
Preference number: 2 (lower is better)
Translates to: AREALVWSLSCFLFNHMQHGKWQ*LAVMTS
Trigger: GGAGGTCATCACAGCCAAGCATTGCCACTTACCATG...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACACTCATGCAGGTCTGTaGACCATCGAGATCCCCATG +
Preference number: 2 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDTHAGL*TIEIPM
Trigger: CATGGGGATCTCGATGGTCCACAGACCTGCATGAGT...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR CCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGCAAACGTTTATGGTATaGAACTTGGGCTGTACTGAC +
Preference number: 2 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEQTFMV*NLGCTD
Trigger: GTCAGTACAGCCCAAGTTCCATACCATAAACGTTTG...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR CCA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTAATGGCTGGAATTGTTaGAATTACTACTCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: DTCSNIYAESASTPWVVVNGWNC*NYYSSR
Trigger: CCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATT...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTTACTGTCAGGCCAATaGCTCATGCAGGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDLLSGQ*LMQVCG
Trigger: TCCACAGACCTGCATGAGTCATTGGCCTGACAGTAA...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR TCA 90 bp TCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACAGATATACAGCGTTTGGTGACTaGGATACTGTTTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: SWQMWHQFHFGAVASYRYTAFGD*DTVSCD
Trigger: GTCACAGGAAACAGTATCTCAGTCACCAAACGCTGT...ATATCTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR GCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTCAGGCCAATGACTCATaGAGGTCTGTGGACCATCGA +
Preference number: 2 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESQANDS*RSVDHR
Trigger: TCGATGGTCCACAGACCTGCATGAGTCATTGGCCTG...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR GCA 90 bp AGCCAGAGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTCGCATATTATGCCTTaGTTCCCCATCATTCGAAAG +
Preference number: 2 (lower is better)
Translates to: SQRHFSMEGRWTLTTLSSSHIMP*FPIIRK
Trigger: CTTTCGAATGATGGGGAAGCAAGGCATAATATGCGA...AGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCTCTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp ATGGAGCCACTGAGCCACTATAACATGAGCCCTAACCACAACCACAAGCAGGACAAACTGTCTCCTCATTaGCTCGTATATACCTTGAGA +
Preference number: 2 (lower is better)
Translates to: MEPLSHYNMSPNHNHKQDKLSPH*LVYTLR
Trigger: TCTCAAGGTATATACGAGGCAATGAGGAGACAGTTT...GTCCTGCTTGTGGTTGTGGTTAGGGCTCATGTTATAGTGGCTCAGTGGCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGCCATCGAGATCCCCATaGATCGCTATTAACACATGG +
Preference number: 2 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVPSRSP*IAINTW
Trigger: CCATGTGTTAATAGCGATCCATGGGGATCTCGATGG...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR CCA 90 bp GCATTTGCAGGGAGGAGCCTGGTAAGATACACTCAAAACCTTTATTCATTGATTCAAGCACTCCCTGGGTaGTGGTTGAATCTGCACCAC +
Preference number: 2 (lower is better)
Translates to: AFAGRSLVRYTQNLYSLIQALPG*WLNLHH
Trigger: GTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTG...AATCAATGAATAAAGGTTTTGAGTGTATCTTACCAGGCTCCTCCCTGCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334166.9
3UTR-3UTR TCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTTTACTGTCAGGCCAATaGCTCATGCAGGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESLLSGQ*LMQVCG
Trigger: TCCACAGACCTGCATGAGTCATTGGCCTGACAGTAA...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR TCA 90 bp AGCCAGAGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTAGTCAAGGAGAAGGCTaGTCTCACCAATTATATGAA +
Preference number: 2 (lower is better)
Translates to: SQRHFSMEGRWTLTTLSSSQGEG*SHQLYE
Trigger: TTCATATAATTGGTGAGATCAGCCTTCTCCTTGACT...AGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCTCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTAGGCTCTGGACACAATTaGCTCAGGTGGAATCTAGGA +
Preference number: 2 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLGSGHN*LRWNLG
Trigger: TCCTAGATTCCACCTGAGTCAATTGTGTCCAGAGCC...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTCCATCGAGATCCCCATaGATCGCTATTAACACATGG +
Preference number: 2 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSPSRSP*IAINTW
Trigger: CCATGTGTTAATAGCGATCCATGGGGATCTCGATGG...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR CCA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTACTGGGGATTTGGAAGTaGGAGCTCTTTGGCAGTATG +
Preference number: 2 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLLGIWK*ELFGSM
Trigger: CATACTGCCAAAGAGCTCCCACTTCCAAATCCCCAG...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCGAACTTGGGCTGTACTaGCAGAAGGCTTTGATGAGT +
Preference number: 2 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCELGLY*QKALMS
Trigger: ACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTC...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR TCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTAGTCGGCCCTCAGAATaGACTAGGACTAATCTCCAC +
Preference number: 2 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTSRPSE*TRTNLH
Trigger: GTGGAGATTAGTCCTAGTTCATTCTGAGGGCCGACT...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCTCTGTGAAATCTTCCTaGTCTTCCTCCCAACCAGGT +
Preference number: 2 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCSVKSS*SSSQPG
Trigger: ACCTGGTTGGGAGGAAGATCAGGAAGATTTCACAGA...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR TCA 90 bp AGTTTCATTTCGGGGCAGTGGCAAGTTACAGATATTTCCTTCACAACAAGAAGTGGACACAGCGTTTGGTaGCTGAGATACTGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: SFISGQWQVTDISFTTRSGHSVW*LRYCFL
Trigger: CAGGAAACAGTATCTCAGTCACCAAACGCTGTGTCC...ACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAAATGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CCA 90 bp TTCGGGGCAGTGGCAAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTCAAACGTTTATGGTATaGAACTTGGGCTGTACTGAC +
Preference number: 2 (lower is better)
Translates to: FGAVASYRYFLHNKKCRPQTFMV*NLGCTD
Trigger: GTCAGTACAGCCCAAGTTCCATACCATAAACGTTTG...AGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR TCA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTAAGCTCTTTGGCAGTATaGACTGCAGATGGAGTAAGA +
Preference number: 2 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLSSLAV*TADGVR
Trigger: TCTTACTCCATCTGCAGTTCATACTGCCAAAGAGCT...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTCCAGGACACCATCACTaGGGAAACCATGGAAAAATC +
Preference number: 2 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTPGHHH*GNHGKI
Trigger: GATTTTTCCATGGTTTCCTCAGTGATGGTGTCCTGG...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCCTGTATCAGAGTTACTaGTGTCAGTTCATATTTAGT +
Preference number: 2 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPLYQSY*CQFIFS
Trigger: ACTAAATATGAACTGACAGCAGTAACTCTGATACAG...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGCTGGCACATACGAGGTaGTTAATAAATGTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: AREALVWSLSCFLFNHMQLAHTR*LINVLL
Trigger: AAGCAAGACATTTATTAAGCACCTCGTATGTGCCAG...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp GTGGCACATAGCTTAATATACACATCATGGCTCTTTACACTTAAGCCATTACCAAAGTCACTGGGGATTTaGAAGTGGGAGCTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: VAHSLIYTSWLFTLKPLPKSLGI*KWELFG
Trigger: GCCAAAGAGCTCCCACTTCCAAATCCCCAGTGACTT...TGGTAATGGCTTAAGTGTAAAGAGCCATGATGTGTATATTAAGCTATGTGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTATCGCATATTATGCCTTaGTTCCCCATCATTCGAAAG +
Preference number: 2 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLSHIMP*FPIIRK
Trigger: CTTTCGAATGATGGGGAAGCAAGGCATAATATGCGA...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp GGCCCTCAGAATGAACTAGGACTAATCTCCACACATTTTTCCTTTCATTCTGAAATTCCTCATGGTAAGTaGCAATGCTTGGCTGTGATG +
Preference number: 2 (lower is better)
Translates to: GPQNELGLISTHFSFHSEIPHGK*QCLAVM
Trigger: CATCACAGCCAAGCATTGCCACTTACCATGAGGAAT...TTCAGAATGAAAGGAAAAATGTGTGGAGATTAGTCCTAGTTCATTCTGAGGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CAA 90 bp ATCACCTCACTGGTCTACTTTCTCCTCATCATCGCATATTATGCCTaGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCTC +
Preference number: 2 (lower is better)
Translates to: ITSLVYFLLIIAYYA*LPHHSKDNLMQNLL
Trigger: GAGAAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGCGATGATGAGGAGAAAGTAGACCAGTGAGGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp ATTGAACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGACTCAGTCAAGTCTCAGGACCTACTaGATCTCATGCATGTATTCT +
Preference number: 2 (lower is better)
Translates to: IEQMAGIVGITTLPGTQSSLRTY*ISCMYS
Trigger: AGAATACATGCATGAGATGCAGTAGGTCCTGAGACT...TGACTGAGTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp ATTGAACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGACTCAGTCACAAACGTTTATGGTATaGAACTTGGGCTGTACTGAC +
Preference number: 2 (lower is better)
Translates to: IEQMAGIVGITTLPGTQSQTFMV*NLGCTD
Trigger: GTCAGTACAGCCCAAGTTCCATACCATAAACGTTTG...TGACTGAGTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp GTGGCACATAGCTTAATATACACATCATGGCTCTTTACACTTAAGCCATTACCAAGTATGAACTGCAGATaGAGTAAGAAGCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: VAHSLIYTSWLFTLKPLPSMNCR*SKKLAE
Trigger: CTCAGCCAGCTTCTTACTCCATCTGCAGTTCATACT...TGGTAATGGCTTAAGTGTAAAGAGCCATGATGTGTATATTAAGCTATGTGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR TCA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTACCATGGAAAAATCCTTaGGACAAACATATTGCTCTT +
Preference number: 2 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLPWKNP*DKHIAL
Trigger: AAGAGCAATATGTTTGTCTCAAGGATTTTTCCATGG...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp GTGGCACATAGCTTAATATACACATCATGGCTCTTTACACTTAAGCCATTACCACATCATCGCATATTATaGCTTGCTTCCCCATCATTC +
Preference number: 2 (lower is better)
Translates to: VAHSLIYTSWLFTLKPLPHHRIL*LASPSF
Trigger: GAATGATGGGGAAGCAAGGCATAATATGCGATGATG...TGGTAATGGCTTAAGTGTAAAGAGCCATGATGTGTATATTAAGCTATGTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CAA 90 bp AGGAAACAGCTTCACAACATTGCGTTTGAGCTTTGGTACCTTCATTaGGGAAGTGTAAATGCTAGTAACATTCTTTATAGGATTCTTGCA +
Preference number: 2 (lower is better)
Translates to: RKQLHNIAFELWYLH*GSVNASNILYRILA
Trigger: TGCAAGAATCCTATAAAGAATGTTACTAGCATTTACACTTCCCAAATGAAGGTACCAAAGCTCAAACGCAATGTTGTGAAGCTGTTTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCACCAGATCTCGATAAATaGAGAACTACTTCTTGGAAT +
Preference number: 2 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSPDLDK*RTTSWN
Trigger: ATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGG...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp TTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCTCCAGAAAACAAACGTTTATaGTATGGAACTTGGGCTGTA +
Preference number: 2 (lower is better)
Translates to: LCLASPSFERQFNAESSPENKRL*YGTWAV
Trigger: TACAGCCCAAGTTCCATACCATAAACGTTTGTTTTC...TGGAGAAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCATAACAGCCACTTTATaGACAGTGGCTCCATTAAGT +
Preference number: 2 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTITATL*TVAPLS
Trigger: ACTTAATGGAGCCACTGTCCATAAAGTGGCTGTTAT...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCACCTACTGCATCTCATaGATGTATTCTTCCAAATTA +
Preference number: 2 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTTYCIS*MYSSKL
Trigger: TAATTTGGAAGAATACATGCATGAGATGCAGTAGGT...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR GCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCTCTTATTCAATCACATaGAGTACTTGGAAGATGTCA +
Preference number: 2 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTSYSIT*STWKMS
Trigger: TGACATCTTCCAAGTACTGCATGTGATTGAATAAGA...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CCA 72 bp CCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTaGATAAGCACTCTTCCAGTGGGACACAGCGTTTGG +
Preference number: 3 (lower is better)
Translates to: PCGLHARSLCSQ*ISTLPVGHSVW
Trigger: CCAAACGCTGTGTCCCACTGGAAGAGTGCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR TCA 72 bp CTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTaGATCTGCACCACTGTGGACCTGATCCCTCTACAC +
Preference number: 3 (lower is better)
Translates to: LCRVCKHSLGGG*ICTTVDLIPLH
Trigger: GTGTAGAGGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 72 bp AAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTaGAGCCAGTGGATAAGCACTCTTCCAGTGGGACAC +
Preference number: 3 (lower is better)
Translates to: KCRPCGLHARSL*SQWISTLPVGH
Trigger: GTGTCCCACTGGAAGAGTGCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR CCA 72 bp GCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTaGTGGTTGAATCTGCACCACTGTGGACCTGATCCC +
Preference number: 3 (lower is better)
Translates to: ATSMQSLQALPG*WLNLHHCGPDP
Trigger: GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CCA 72 bp ACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTaGTTGAATCTGCACCACTGTGGACCTGATCCCTCT +
Preference number: 3 (lower is better)
Translates to: TSMQSLQALPGW*LNLHHCGPDPS
Trigger: AGAGGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp ATGGAGCCACTGAGCCACTATAACATGAGCCCTAACCACAACCACAAGCAGGACGGTAAGTGGCAATGCTaGGCTGTGATGACCTCCAAG +
Preference number: 3 (lower is better)
Translates to: MEPLSHYNMSPNHNHKQDGKWQC*AVMTSK
Trigger: CTTGGAGGTCATCACAGCCAAGCATTGCCACTTACC...GTCCTGCTTGTGGTTGTGGTTAGGGCTCATGTTATAGTGGCTCAGTGGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CAA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGGGTAAGTGGCAATGCTaGGCTGTGATGACCTCCAAG +
Preference number: 3 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEGKWQC*AVMTSK
Trigger: CTTGGAGGTCATCACAGCCAAGCATTGCCACTTACC...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR-3UTR CAA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCGGTGTGGTCACTTTCTaGTTTCTTATTCAATCACAT +
Preference number: 3 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPGVVTF*FLIQSH
Trigger: ATGTGATTGAATAAGAAACAAGAAAGTGACCACACC...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 72 bp TCTCACATGTGTAATTACTGTCAGGCCAATGACTCATaGAGGTCTGTGGACCATCGAGATCCCCATGGATCG +
Preference number: 3 (lower is better)
Translates to: SHMCNYCQANDS*RSVDHRDPHGS
Trigger: CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR GCA 72 bp GGGATTTGGAAGTGGGAGCTCTTTGGCAGTATGAACTaGAGATGGAGTAAGAAGCTGGCTGAGCCACTTAGT +
Preference number: 3 (lower is better)
Translates to: GIWKWELFGSMN*RWSKKLAEPLS
Trigger: ACTAAGTGGCTCAGCCAGCTTCTTACTCCATCTGCAGTTCATACTGCCAAAGAGCTCCCACTTCCAAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 72 bp TTAAACACTGCCATTCTGACAGGCACATGGGACACATaGAGCAACATCTATGCAGAGTCTGCAAGCACTCCC +
Preference number: 3 (lower is better)
Translates to: LNTAILTGTWDT*SNIYAESASTP
Trigger: GGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGGGTAAGTGGCAATGCTaGGCTGTGATGACCTCCAAG +
Preference number: 3 (lower is better)
Translates to: AREALVWSLSCFLFNHMQGKWQC*AVMTSK
Trigger: CTTGGAGGTCATCACAGCCAAGCATTGCCACTTACC...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp GACGTCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACAGTTTATGGTATGGAACTaGGGCTGTACTGACAGAAGG +
Preference number: 3 (lower is better)
Translates to: DVVANVASVSFRGSGKLQFMVWN*GCTDRR
Trigger: CCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAA...CTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CAA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCAGTGGCTCCATTAAGTaGAGGAAAATCCTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPSGSIK*RKILLQ
Trigger: CTGGAGGAGGATTTTCCTCAACTTAATGGAGCCACT...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACCAAGAAGTGCAGACCTaGTGGCCTTCATGCTCGGAG +
Preference number: 3 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDQEVQT*WPSCSE
Trigger: CTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR CCA 72 bp CCTGATCCCTCTACACCAGCCAGGGAGGCTTTGGTGTaGTCACTTTCTTGTTTCTTATTCAATCACATGCAG +
Preference number: 3 (lower is better)
Translates to: PDPSTPAREALV*SLSCFLFNHMQ
Trigger: CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGCTGGTGTAGAGGGATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CCA 72 bp GTGGACCTGATCCCTCTACACCAGCCAGGGAGGCTTTaGTGTGGTCACTTTCTTGTTTCTTATTCAATCACA +
Preference number: 3 (lower is better)
Translates to: VDLIPLHQPGRL*CGHFLVSYSIT
Trigger: TGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGCTGGTGTAGAGGGATCAGGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp GCATTTGCAGGGAGGAGCCTGGTAAGATACACTCAAAACCTTTATTCATTGATTCCAGCCAGGGAGGCTTaGGTGTGGTCACTTTCTTGT +
Preference number: 3 (lower is better)
Translates to: AFAGRSLVRYTQNLYSLIPAREA*VWSLSC
Trigger: ACAAGAAAGTGACCACACCAAAGCCTCCCTGGCTGG...AATCAATGAATAAAGGTTTTGAGTGTATCTTACCAGGCTCCTCCCTGCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334166.9
3UTR TCA 72 bp CATACAGCGTGGGTGCCCATTTGTCTGATTTATAGGTaGCGTCGTGGCAAATGTGGCATCAGTTTCATTTCG +
Preference number: 3 (lower is better)
Translates to: HTAWVPICLIYR*RRGKCGISFIS
Trigger: CGAAATGAAACTGATGCCACATTTGCCACGACGTCACCTATAAATCAGACAAATGGGCACCCACGCTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR TCA 72 bp ACTATCACTGACATACAGCGTGGGTGCCCATTTGTCTaGTTTATAGGTGACGTCGTGGCAAATGTGGCATCA +
Preference number: 3 (lower is better)
Translates to: TITDIQRGCPFV*FIGDVVANVAS
Trigger: TGATGCCACATTTGCCACGACGTCACCTATAAATCAGACAAATGGGCACCCACGCTGTATGTCAGTGATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CAA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTGGTAAGTGGCAATGCTaGGCTGTGATGACCTCCAAG +
Preference number: 3 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTGKWQC*AVMTSK
Trigger: CTTGGAGGTCATCACAGCCAAGCATTGCCACTTACC...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCCTCCCTGGGTGGTGGTaGAATCTGCACCACTGTGGA +
Preference number: 3 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTLPGWW*NLHHCG
Trigger: TCCACAGTGGTGCAGATTCAACCACCACCCAGGGAG...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGATAGTACCACAACTTTaGACCATGCACGATGAAAAA +
Preference number: 3 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEIVPQL*TMHDEK
Trigger: TTTTTCATCGTGCATGGTCAAAAGTTGTGGTACTAT...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR TCA 72 bp ATAACAGCCACTTTATGGACAGTGGCTCCATTAAGTTaGGGAAAATCCTCCTCCAGGCACCCCCACAAATAT +
Preference number: 3 (lower is better)
Translates to: ITATLWTVAPLS*GKSSSRHPHKY
Trigger: ATATTTGTGGGGGTGCCTGGAGGAGGATTTTCCTCAACTTAATGGAGCCACTGTCCATAAAGTGGCTGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR TCA 72 bp AAGAAGCTGGCTGAGCCACTTAGTCGGCCCTCAGAATaGACTAGGACTAATCTCCACACATTTTTCCTTTCA +
Preference number: 3 (lower is better)
Translates to: KKLAEPLSRPSE*TRTNLHTFFLS
Trigger: TGAAAGGAAAAATGTGTGGAGATTAGTCCTAGTTCATTCTGAGGGCCGACTAAGTGGCTCAGCCAGCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 72 bp GTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTaGCTCGTATATACCTTGAGACATAGTACCACAACT +
Preference number: 3 (lower is better)
Translates to: VLLDGGSKLSPH*LVYTLRHSTTT
Trigger: AGTTGTGGTACTATGTCTCAAGGTATATACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR TCA 72 bp TGGACACAATTGACTCAGGTGGAATCTAGGATCTCATaGAGCATAATTAGGTGCCAAGTCAAGGAGAAGGCT +
Preference number: 3 (lower is better)
Translates to: WTQLTQVESRIS*SIIRCQVKEKA
Trigger: AGCCTTCTCCTTGACTTGGCACCTAATTATGCTTCATGAGATCCTAGATTCCACCTGAGTCAATTGTGTCCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR TCA 72 bp GCTCCAAACTGTCTCCTCATTGCCTCGTATATACCTTaGGACATAGTACCACAACTTTTGACCATGCACGAT +
Preference number: 3 (lower is better)
Translates to: APNCLLIASYIP*DIVPQLLTMHD
Trigger: ATCGTGCATGGTCAAAAGTTGTGGTACTATGTCTCAAGGTATATACGAGGCAATGAGGAGACAGTTTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR CCA 72 bp GGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTaGCAATGCTTGGCTGTGATGACCTCCAAGAGTGTT +
Preference number: 3 (lower is better)
Translates to: GYNEATFIPHGK*QCLAVMTSKSV
Trigger: AACACTCTTGGAGGTCATCACAGCCAAGCATTGCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
3UTR CCA 72 bp CGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTaGCAAGTTACAGATATTTCCTTCACAACAAGAAGT +
Preference number: 3 (lower is better)
Translates to: RGKCGISFISGQ*QVTDISFTTRS
Trigger: ACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CAA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATGGGCTCTGGACACAATaGACTCAGGTGGAATCTAGG +
Preference number: 3 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHGLWTQ*TQVESR
Trigger: CCTAGATTCCACCTGAGTCAATTGTGTCCAGAGCCC...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCTGCCTCGTATATACCTaGAGACATAGTACCACAACT +
Preference number: 3 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCCLVYT*RHSTTT
Trigger: AGTTGTGGTACTATGTCTCAAGGTATATACGAGGCA...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CAA 90 bp AGTTTCATTTCGGGGCAGTGGCAAGTTACAGATATTTCCTTCACAACAAGAAGTTGCCTCGTATATACCTaGAGACATAGTACCACAACT +
Preference number: 3 (lower is better)
Translates to: SFISGQWQVTDISFTTRSCLVYT*RHSTTT
Trigger: AGTTGTGGTACTATGTCTCAAGGTATATACGAGGCA...ACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAAATGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR-3UTR CAA 90 bp GCATTTGCAGGGAGGAGCCTGGTAAGATACACTCAAAACCTTTATTCATTGATTAAATGGCTGGAATTGTaGGAATTACTACTCTTCCAG +
Preference number: 3 (lower is better)
Translates to: AFAGRSLVRYTQNLYSLIKWLEL*ELLLFQ
Trigger: CTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTT...AATCAATGAATAAAGGTTTTGAGTGTATCTTACCAGGCTCCTCCCTGCAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334166.9
3UTR-3UTR CAA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTAAAGAAAAACTTCCCATaGAGTCTCCTTGTTAGTCTT +
Preference number: 3 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLKKNFP*SLLVSL
Trigger: AAGACTAACAAGGAGACTCAATGGGAAGTTTTTCTT...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATAACAGCTTCACAACATaGCGTTTGAGCTTTGGTACC +
Preference number: 3 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHNSFTT*RLSFGT
Trigger: GGTACCAAAGCTCAAACGCAATGTTGTGAAGCTGTT...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR GCA 72 bp CTCACTGGTCTACTTTCTCCTCATCATCGCATATTATaGCTTGCTTCCCCATCATTCGAAAGACAATTTAAT +
Preference number: 3 (lower is better)
Translates to: LTGLLSPHHRIL*LASPSFERQFN
Trigger: ATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGCGATGATGAGGAGAAAGTAGACCAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CCA 72 bp TGCAGAACTACTTCTTGGAATGAAAACAAACGTTTATaGTATGGAACTTGGGCTGTACTGACAGAAGGCTTT +
Preference number: 3 (lower is better)
Translates to: CRTTSWNENKRL*YGTWAVLTEGF
Trigger: AAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTTGTTTTCATTCCAAGAAGTAGTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR-3UTR CAA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTACCATGGAAAAATCCTaGAGACAAACATATTGCTCT +
Preference number: 3 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTTMEKS*RQTYCS
Trigger: AGAGCAATATGTTTGTCTCAAGGATTTTTCCATGGT...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR TCA 72 bp TTGAGACATAGTACCACAACTTTTGACCATGCACGATaGAAAATGTGCATCCTTAGCATGGTCTGCATATTT +
Preference number: 3 (lower is better)
Translates to: LRHSTTTFDHAR*KMCILSMVCIF
Trigger: AAATATGCAGACCATGCTAAGGATGCACATTTTTCATCGTGCATGGTCAAAAGTTGTGGTACTATGTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
3UTR CCA 72 bp AGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTaGAATGAAAACAAACGTTTATGGTATGGAACTTGG +
Preference number: 3 (lower is better)
Translates to: RTPDLDKCRTTS*NENKRLWYGTW
Trigger: CCAAGTTCCATACCATAAACGTTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGAGCCGGGCCAGCAGCTaGGTGCGTGGCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CQANDSCRSVDHRDPHGSSRASS*VRGCRP
Trigger: GGGCCTGCAGCCACGCACGCAGCTGCTGGCCCGGCT...CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS-3UTR GCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGAACTTGCACCCGGGCTaGGCGCGGATTCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMNLHPG*ARIPAA
Trigger: GGCGGCCGGAATCCGCGCGCAGCCCGGGTGCAAGTT...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000418762.5
CDS-3UTR CCA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTCAGCAGCTGCGTGCGTaGCTGCAGGCCCGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DTCSNIYAESASTPWVVVQQLRA*LQARQC
Trigger: ACACTGCCGGGCCTGCAGCCACGCACGCAGCTGCTG...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS-3UTR GCA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTCCAGCTGCAGCCCGCTaGCCCATCCCACGAACACTG +
Preference number: 4 (lower is better)
Translates to: DTCSNIYAESASTPWVVVPAAAR*PIPRTL
Trigger: CAGTGTTCGTGGGATGGGGCAGCGGGCTGCAGCTGG...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR GCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGCCATCCCACGAACACTaGGGCGCCCCCAGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEPSHEH*GAPRVC
Trigger: GCACACTCTGGGGGCGCCGCAGTGTTCGTGGGATGG...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR GCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATTCCGGCCGCCAGCTaGAGCCCGCTGCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIEIPAAS*SPLPHP
Trigger: GGGATGGGGCAGCGGGCTGCAGCTGGCGGCCGGAAT...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000418762.5
CDS-3UTR CCA 90 bp AAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATAAGCCTCATACAGAGGGCCTaGGAGTGGGCACTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KCRPCGLHARSLCSQWISLIQRA*EWALRA
Trigger: TGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAG...GCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCGCACTCCCTGGGTGGTaGTTGAATCTGCACCACTGT +
Preference number: 4 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPALPGW*LNLHHC
Trigger: ACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGC...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATGCAGGACACTATCACTaGCATACAGCGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDAGHYH*HTAWVP
Trigger: GGGCACCCACGCTGTATGTCAGTGATAGTGTCCTGC...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGATTCCGGCCGCCAGCTaGAGCCCGCTGCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWIPAAS*SPLPHP
Trigger: GGGATGGGGCAGCGGGCTGCAGCTGGCGGCCGGAAT...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000418762.5
CDS-3UTR CCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGCAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMQRAWE*ALRATG
Trigger: TCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTG...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GGTGACGTCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: GDVVANVASVSFRGSGKLQRAWE*ALRATG
Trigger: TCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTG...TAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGACGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCGGGTGCCCATTTGTCTaGTTTATAGGTGACGTCGTG +
Preference number: 4 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPGCPFV*FIGDVV
Trigger: CACGACGTCACCTATAAATCAGACAAATGGGCACCC...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TCTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTAGCAGGACACTATCACTaGCATACAGCGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SGLVLLDGGSKLSPHCLVAGHYH*HTAWVP
Trigger: GGGCACCCACGCTGTATGTCAGTGATAGTGTCCTGC...TACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGGCAGGACACTATCACTaGCATACAGCGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWAGHYH*HTAWVP
Trigger: GGGCACCCACGCTGTATGTCAGTGATAGTGTCCTGC...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTAAAAGTCAGAGTGGCTaGCCAGTCCCGGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: DTCSNIYAESASTPWVVVKSQSG*PVPDLP
Trigger: TGGAAGGTCCGGGACTGGTCAGCCACTCTGACTTTT...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp AAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATAAGCCATGCTCGGAGTCTCTaGAGCCAGTGGATAAGCACT +
Preference number: 4 (lower is better)
Translates to: KCRPCGLHARSLCSQWISHARSL*SQWIST
Trigger: AGTGCTTATCCACTGGCTGCAGAGACTCCGAGCATG...GCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATCAGGCCAATGACTCATaGAGGTCTGTGGACCATCGA +
Preference number: 4 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDQANDS*RSVDHR
Trigger: TCGATGGTCCACAGACCTGCATGAGTCATTGGCCTG...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp AAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATAAGCCAGGCCAATGACTCATaGAGGTCTGTGGACCATCGA +
Preference number: 4 (lower is better)
Translates to: KCRPCGLHARSLCSQWISQANDS*RSVDHR
Trigger: TCGATGGTCCACAGACCTGCATGAGTCATTGGCCTG...GCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp GTCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACAGATACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: VVANVASVSFRGSGKLQIQRAWE*ALRATG
Trigger: TCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTG...TATCTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCCTCATACAGAGGGCCTaGGAGTGGGCACTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPLIQRA*EWALRA
Trigger: TGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAG...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CAA 72 bp TCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTaGAATCTGCACCACTGTGGACCTGATCCCTCTACA +
Preference number: 4 (lower is better)
Translates to: SMQSLQALPGWW*NLHHCGPDPST
Trigger: TGTAGAGGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGCCCGGACCTTCCATGTaGATGACTCTTCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEPGPSM*MTLPWL
Trigger: GAGCCAAGGAAGAGTCATTCACATGGAAGGTCCGGG...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGACCTTGTGGCCTTCATaGTCGGAGTCTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATETLWPS*SESLQP
Trigger: TGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGT...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGCAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWQRAWE*ALRATG
Trigger: TCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTG...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCCTCATACAGAGGGCCTaGGAGTGGGCACTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTLIQRA*EWALRA
Trigger: TGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAG...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGCAGGGCCAGGTTCCATaGCAGACTGAAGTGTCACTC +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEQGQVP*QTEVSL
Trigger: GAGTGACACTTCAGTCTGCCATGGAACCTGGCCCTG...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAAGGGCAGTAGATGTCTaGAGCCCATCGGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLRAVDV*SPSVAL
Trigger: GAGTGCAACCGATGGGCTCCAGACATCTACTGCCCT...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGAGTCTCTGCAGCCAGTaGATAAGCACTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: CQANDSCRSVDHRDPHGSSLCSQ*ISTLPV
Trigger: CACTGGAAGAGTGCTTATCCACTGGCTGCAGAGACT...CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCCTGTGCGCGACCCCCTaGCGCCTCTCCCTAGCCGCC +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGLCATP*RLSLAA
Trigger: GGCGGCTAGGGAGAGGCGCCAGGGGGTCGCGCACAG...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS-3UTR TCA 90 bp ATGGAGCCACTGAGCCACTATAACATGAGCCCTAACCACAACCACAAGCAGGACGTGAAGTCTCGGGACTaGGCAGCTTTCAGACAATCC +
Preference number: 4 (lower is better)
Translates to: MEPLSHYNMSPNHNHKQDVKSRD*AAFRQS
Trigger: GGATTGTCTGAAAGCTGCTCAGTCCCGAGACTTCAC...GTCCTGCTTGTGGTTGTGGTTAGGGCTCATGTTATAGTGGCTCAGTGGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGTGAAGTCTCGGGACTaGGCAGCTTTCAGACAATCC +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMVKSRD*AAFRQS
Trigger: GGATTGTCTGAAAGCTGCTCAGTCCCGAGACTTCAC...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTAGTCGGCCCTCAGAATaGACTAGGACTAATCTCCAC +
Preference number: 4 (lower is better)
Translates to: DTCSNIYAESASTPWVVVSRPSE*TRTNLH
Trigger: GTGGAGATTAGTCCTAGTTCATTCTGAGGGCCGACT...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCAAAAGTCAGAGTGGCTaGCCAGTCCCGGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPKSQSG*PVPDLP
Trigger: TGGAAGGTCCGGGACTGGTCAGCCACTCTGACTTTT...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp CATTGTGTGCTGAGTGTAGCAGTATCTGGTCTGGTTCTCCTTGATGGAGGCTCCTGGTCTGGTTCTCCTTaGTGGAGGCTCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: HCVLSVAVSGLVLLDGGSWSGSP*WRLQTV
Trigger: GACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCA...GGAGCCTCCATCAAGGAGAACCAGACCAGATACTGCTACACTCAGCACACAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCAACTTGCACCCGGGCTaGGCGCGGATTCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGNLHPG*ARIPAA
Trigger: GGCGGCCGGAATCCGCGCGCAGCCCGGGTGCAAGTT...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000418762.5
CDS-3UTR GCA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATGTGAGGGCTGTTCTCTaGTTCCAAAATAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDVRAVL*FQNSAL
Trigger: CAAGGCACTATTTTGGAAGCAGAGAACAGCCCTCAC...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392854.4
CDS-3UTR GCA 90 bp TTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAGTTTGGAGTCAACTTGCACCTTCCTGTaGGCGACCCCCTGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: FQGLSQNFQGNSPFSLESTCTFL*ATPWRL
Trigger: GAGGCGCCAGGGGGTCGCGCACAGGAAGGTGCAAGT...TGACTCCAAACTGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS-3UTR CCA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATCAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHQRAWE*ALRATG
Trigger: TCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTG...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGCTCATACAGAGGGCCTaGGAGTGGGCACTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLLIQRA*EWALRA
Trigger: TGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAG...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGACTCATGCAGGTCTGTaGACCATCGAGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMTHAGL*TIEIPM
Trigger: CATGGGGATCTCGATGGTCCACAGACCTGCATGAGT...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGACTCATGCAGGTCTGTaGACCATCGAGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATETHAGL*TIEIPM
Trigger: CATGGGGATCTCGATGGTCCACAGACCTGCATGAGT...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACTCATGCAGGTCTGTaGACCATCGAGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLTHAGL*TIEIPM
Trigger: CATGGGGATCTCGATGGTCCACAGACCTGCATGAGT...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGTCTGCAAGCACTCCCTaGGTGGTGGTTGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMSASTP*VVVESA
Trigger: TGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGA...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGTCTGCAAGCACTCCCTaGGTGGTGGTTGAATCTGCA +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATESASTP*VVVESA
Trigger: TGCAGATTCAACCACCACCCAGGGAGTGCTTGCAGA...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAGGTTCCATGGCAGACTaGAGTGTCACTCATACAGAG +
Preference number: 4 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLGSMAD*SVTHTE
Trigger: CTCTGTATGAGTGACACTTCAGTCTGCCATGGAACC...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGGGTTCCATGGCAGACTaGAGTGTCACTCATACAGAG +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWGSMAD*SVTHTE
Trigger: CTCTGTATGAGTGACACTTCAGTCTGCCATGGAACC...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGGGGTGCCCATTTGTCTaGTTTATAGGTGACGTCGTG +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWGCPFV*FIGDVV
Trigger: CACGACGTCACCTATAAATCAGACAAATGGGCACCC...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp CTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTATTTACTGTCAGGCCAATaGCTCATGCAGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LVWFSLMEAPNCLLIASYLLSGQ*LMQVCG
Trigger: TCCACAGACCTGCATGAGTCATTGGCCTGACAGTAA...ATACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGGGCTCTGGACACAATTaGCTCAGGTGGAATCTAGGA +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEGSGHN*LRWNLG
Trigger: TCCTAGATTCCACCTGAGTCAATTGTGTCCAGAGCC...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGAGCTCTTTGGCAGTATaGACTGCAGATGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: CQANDSCRSVDHRDPHGSSSLAV*TADGVR
Trigger: TCTTACTCCATCTGCAGTTCATACTGCCAAAGAGCT...CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAAGCAAGAGGGATGAATaGGGAAGCCAAACCCCTACT +
Preference number: 4 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLSKRDE*GSQTPT
Trigger: AGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCT...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGAGATTCCGTGTCTGGTaGGGGCTGTTCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIERFRVW*GLFSAS
Trigger: GGAAGCAGAGAACAGCCCTCACCAGACACGGAATCT...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR TCA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACGAGCTCAAGAGCAAGTaGAGCTCCGAACCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDELKSK*SSEPRE
Trigger: TTCCCTGGGTTCGGAGCTTCACTTGCTCTTGAGCTC...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS-3UTR TCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCCCCGGCAGTGTGAAATaGCCCTGGCCAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTPGSVK*PWPNLT
Trigger: AGTGAGATTTGGCCAGGGTCATTTCACACTGCCGGG...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS-3UTR GCA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAACCCCAGAGTGTGCAATaGGGCGCCCCGCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKPQSVQ*GAPPAR
Trigger: GCGGGCTGGCGGGGCGCCGCATTGCACACTCTGGGG...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR GCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGCTGGAGCCCATCGGTTaGACTCATAATTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWLEPIG*THNCLL
Trigger: CAGCAGACAATTATGAGTGCAACCGATGGGCTCCAG...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGCTGGAGCCCATCGGTTaGACTCATAATTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATELEPIG*THNCLL
Trigger: CAGCAGACAATTATGAGTGCAACCGATGGGCTCCAG...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGCATGGTAAGTGGCAATaGTTGGCTGTGATGACCTCC +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWHGKWQ*LAVMTS
Trigger: GGAGGTCATCACAGCCAAGCATTGCCACTTACCATG...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGCATGGTAAGTGGCAATaGTTGGCTGTGATGACCTCC +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMHGKWQ*LAVMTS
Trigger: GGAGGTCATCACAGCCAAGCATTGCCACTTACCATG...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCCAGGGCCAGGTTCCATaGCAGACTGAAGTGTCACTC +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTQGQVP*QTEVSL
Trigger: GAGTGACACTTCAGTCTGCCATGGAACCTGGCCCTG...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCAGGGCAGTAGATGTCTaGAGCCCATCGGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTRAVDV*SPSVAL
Trigger: GAGTGCAACCGATGGGCTCCAGACATCTACTGCCCT...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGAGTCTCTGCAGCCAGTaGATAAGCACTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMSLCSQ*ISTLPV
Trigger: CACTGGAAGAGTGCTTATCCACTGGCTGCAGAGACT...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGATTCCTCATGGTAAGTaGCAATGCTTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: CQANDSCRSVDHRDPHGSIPHGK*QCLAVM
Trigger: CATCACAGCCAAGCATTGCCACTTACCATGAGGAAT...CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp AGCCAGAGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTGATGGAGTAAGAAGCTaGCTGAGCCACTTAGTCGGC +
Preference number: 4 (lower is better)
Translates to: SQRHFSMEGRWTLTTLSSDGVRS*LSHLVG
Trigger: GCCGACTAAGTGGCTCAGCCAGCTTCTTACTCCATC...AGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCTCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTACTGGGGATTTGGAAGTaGGAGCTCTTTGGCAGTATG +
Preference number: 4 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLLGIWK*ELFGSM
Trigger: CATACTGCCAAAGAGCTCCCACTTCCAAATCCCCAG...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCACAAAGACATGCTCTTaGGAAGCTGTAGACCTTATT +
Preference number: 4 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPTKTCS*EAVDLI
Trigger: AATAAGGTCTACAGCTTCCCAAGAGCATGTCTTTGT...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR TCA 90 bp CATTGTGTGCTGAGTGTAGCAGTATCTGGTCTGGTTCTCCTTGATGGAGGCTCCACAGCGTTTGGTGACTaGGATACTGTTTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: HCVLSVAVSGLVLLDGGSTAFGD*DTVSCD
Trigger: GTCACAGGAAACAGTATCTCAGTCACCAAACGCTGT...GGAGCCTCCATCAAGGAGAACCAGACCAGATACTGCTACACTCAGCACACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp CTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTATACAGCGTTTGGTGACTaGGATACTGTTTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LVWFSLMEAPNCLLIASYTAFGD*DTVSCD
Trigger: GTCACAGGAAACAGTATCTCAGTCACCAAACGCTGT...ATACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGACAGCGTTTGGTGACTaGGATACTGTTTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATETAFGD*DTVSCD
Trigger: GTCACAGGAAACAGTATCTCAGTCACCAAACGCTGT...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACGCAGGACACTATCACTaGCATACAGCGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDAGHYH*HTAWVP
Trigger: GGGCACCCACGCTGTATGTCAGTGATAGTGTCCTGC...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp TCTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTAGAACTTGGGCTGTACTaGCAGAAGGCTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: SGLVLLDGGSKLSPHCLVELGLY*QKALMS
Trigger: ACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTC...TACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGAACTTGGGCTGTACTaGCAGAAGGCTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMELGLY*QKALMS
Trigger: ACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTC...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTACCAGGACACCATCACTaGGGAAACCATGGAAAAATC +
Preference number: 4 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLPGHHH*GNHGKI
Trigger: GATTTTTCCATGGTTTCCTCAGTGATGGTGTCCTGG...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGCCAGGACACCATCACTaGGGAAACCATGGAAAAATC +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEPGHHH*GNHGKI
Trigger: GATTTTTCCATGGTTTCCTCAGTGATGGTGTCCTGG...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TTCGGGGCAGTGGCAAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTAGATTCCGTGTCTGGTaGGGGCTGTTCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: FGAVASYRYFLHNKKCRPRFRVW*GLFSAS
Trigger: GGAAGCAGAGAACAGCCCTCACCAGACACGGAATCT...AGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392854.4
CDS-3UTR TCA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTATCTGTGAAATCTTCCTaGTCTTCCTCCCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLSVKSS*SSSQPG
Trigger: ACCTGGTTGGGAGGAAGATCAGGAAGATTTCACAGA...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp AAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATAAGCTTTGACCATGCACGATaGAAAATGTGCATCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KCRPCGLHARSLCSQWISFDHAR*KMCILS
Trigger: GCTAAGGATGCACATTTTTCATCGTGCATGGTCAAA...GCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp TGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGTTTGACCATGCACGATaGAAAATGTGCATCCTTAGC +
Preference number: 4 (lower is better)
Translates to: CQANDSCRSVDHRDPHGSFDHAR*KMCILS
Trigger: GCTAAGGATGCACATTTTTCATCGTGCATGGTCAAA...CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCCATGCTCGGAGTCTCTaGAGCCAGTGGATAAGCACT +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTHARSL*SQWIST
Trigger: AGTGCTTATCCACTGGCTGCAGAGACTCCGAGCATG...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCTTGTGGCCTTCATaGTCGGAGTCTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWTLWPS*SESLQP
Trigger: TGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGT...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTCTTCACAACAAGAAGTaGAGACCTTGTGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: DTCSNIYAESASTPWVVVLHNKK*RPCGLH
Trigger: ATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAG...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGCAGGCCAATGACTCATaGAGGTCTGTGGACCATCGA +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIEQANDS*RSVDHR
Trigger: TCGATGGTCCACAGACCTGCATGAGTCATTGGCCTG...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TCTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTACACCAGGATATGGTGTaGTTGAAGGATGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SGLVLLDGGSKLSPHCLVHQDMV*LKDGGR
Trigger: TCTACCTCCATCCTTCAACCACACCATATCCTGGTG...TACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGAGGGCAGTAGATGTCTaGAGCCCATCGGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWRAVDV*SPSVAL
Trigger: GAGTGCAACCGATGGGCTCCAGACATCTACTGCCCT...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCGAAGTGCAGACCTTGTaGCCTTCATGCTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTEVQTL*PSCSES
Trigger: AGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTC...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGAAAACAACTCCATCCTaGTTTGGGGCTCTGGACACA +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEKTTPS*FGALDT
Trigger: TGTGTCCAGAGCCCCAAACCAGGATGGAGTTGTTTT...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGGCACTCCCTGGGTGGTaGTTGAATCTGCACCACTGT +
Preference number: 4 (lower is better)
Translates to: AREALVWSLSCFLFNHMQALPGW*LNLHHC
Trigger: ACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGC...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGCAAGCACTCCCTGGGTaGTGGTTGAATCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVQALPG*WLNLHH
Trigger: GTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTG...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGGTAGAAAAGTCAGAGTaGCTGACCAGTCCCGGACCT +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIEVEKSE*LTSPGP
Trigger: AGGTCCGGGACTGGTCAGCCACTCTGACTTTTCTAC...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GACGTCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACAGTTCCCATTGTTTTGCTaGAGCTCGGAAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DVVANVASVSFRGSGKLQFPLFC*SSEASS
Trigger: AGAAGAGGCTTCCGAGCTCCAGCAAAACAATGGGAA...CTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392854.4
CDS-3UTR TCA 90 bp GACGTCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACAGAGATACTGTTTCCTGTaGCTTCCATTGTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: DVVANVASVSFRGSGKLQRYCFL*LPLCAE
Trigger: CTCAGCACACAATGGAAGTCACAGGAAACAGTATCT...CTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCACAGCGTTTGGTGACTaGGATACTGTTTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPTAFGD*DTVSCD
Trigger: GTCACAGGAAACAGTATCTCAGTCACCAAACGCTGT...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACGGACACAGCGTTTGGTaGCTGAGATACTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDGHSVW*LRYCFL
Trigger: CAGGAAACAGTATCTCAGTCACCAAACGCTGTGTCC...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGGGGTGCCCATTTGTCTaGTTTATAGGTGACGTCGTG +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIEGCPFV*FIGDVV
Trigger: CACGACGTCACCTATAAATCAGACAAATGGGCACCC...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTGCAGGACACTATCACTaGCATACAGCGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESAGHYH*HTAWVP
Trigger: GGGCACCCACGCTGTATGTCAGTGATAGTGTCCTGC...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGGTGGCTCCATTAAGTTaGGGAAAATCCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIEVAPLS*GKSSSR
Trigger: CCTGGAGGAGGATTTTCCTCAACTTAATGGAGCCAC...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACGGCTCTGGACACAATTaGCTCAGGTGGAATCTAGGA +
Preference number: 4 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDGSGHN*LRWNLG
Trigger: TCCTAGATTCCACCTGAGTCAATTGTGTCCAGAGCC...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGCTTCTTTCTCTTGCTTaGGATTGCTCAAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMLLSLA*DCSRRL
Trigger: CAACCTCCTTGAGCAATCTCAAGCAAGAGAAAGAAG...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR TCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTGCAGGCCCGGCAGTGTaGAATGACCCTGGCCAAATC +
Preference number: 4 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTAGPAV*NDPGQI
Trigger: GATTTGGCCAGGGTCATTTCACACTGCCGGGCCTGC...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS-3UTR GCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGCATGCTCGGAGTCTCTaGAGCCAGTGGATAAGCACT +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLHARSL*SQWIST
Trigger: AGTGCTTATCCACTGGCTGCAGAGACTCCGAGCATG...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATACCTTGTGGCCTTCATaGTCGGAGTCTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHTLWPS*SESLQP
Trigger: TGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGT...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTACCTTGTGGCCTTCATaGTCGGAGTCTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSTLWPS*SESLQP
Trigger: TGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGT...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp TCTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTACTTCACAACAAGAAGTaGAGACCTTGTGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: SGLVLLDGGSKLSPHCLVLHNKK*RPCGLH
Trigger: ATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAG...TACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp GGTGACGTCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACTTCACAACAAGAAGTaGAGACCTTGTGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GDVVANVASVSFRGSGKLLHNKK*RPCGLH
Trigger: ATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAG...TAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGACGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGCTTCACAACAAGAAGTaGAGACCTTGTGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMLHNKK*RPCGLH
Trigger: ATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAG...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGCAGGCCAATGACTCATaGAGGTCTGTGGACCATCGA +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVQANDS*RSVDHR
Trigger: TCGATGGTCCACAGACCTGCATGAGTCATTGGCCTG...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATGGTAAGTGGCAATaGTTGGCTGTGATGACCTCC +
Preference number: 4 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDHGKWQ*LAVMTS
Trigger: GGAGGTCATCACAGCCAAGCATTGCCACTTACCATG...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGCATGGTAAGTGGCAATaGTTGGCTGTGATGACCTCC +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIEHGKWQ*LAVMTS
Trigger: GGAGGTCATCACAGCCAAGCATTGCCACTTACCATG...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCATTGACATGTGCATTTaGAGGGAGGAGCCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPIDMCI*REEPGK
Trigger: CTTACCAGGCTCCTCCCTGCAAATGCACATGTCAAT...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR GCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGTCATTGATTGACATGTaGATTTGCAGGGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMSLIDM*ICREEP
Trigger: AGGCTCCTCCCTGCAAATGCACATGTCAATCAATGA...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR GCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGTTTTTCCCATTGTTTTaGTGGAGCTCGGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEFFPLF*WSSEAS
Trigger: AGAGGCTTCCGAGCTCCAGCAAAACAATGGGAAAAA...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR GCA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATAAACTGTCTCCTCATTaGCTCGTATATACCTTGAGA +
Preference number: 4 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDKLSPH*LVYTLR
Trigger: TCTCAAGGTATATACGAGGCAATGAGGAGACAGTTT...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGGAAGTGCAGACCTTGTaGCCTTCATGCTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLEVQTL*PSCSES
Trigger: AGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTC...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGTTATGGTATGGAACTTaGGCTGTACTGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWLWYGT*AVLTEG
Trigger: GCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAA...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp CTTTCAAGAGAATTAAACACTGCCATTCTGACAGGCACATGGGACACATGCAGCTCTATGGAGGGCAGATaGACCCTGACAACACTGTCC +
Preference number: 4 (lower is better)
Translates to: LSRELNTAILTGTWDTCSSMEGR*TLTTLS
Trigger: GGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGA...GCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGATTGCGTTTGAGCTTTaGTACCTTCATTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CQANDSCRSVDHRDPHGSIAFEL*YLHLGS
Trigger: ACTTCCCAAATGAAGGTACCAAAGCTCAAACGCAAT...CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp CTTTCAAGAGAATTAAACACTGCCATTCTGACAGGCACATGGGACACATGCAGCGTAGAAAAGTCAGAGTaGCTGACCAGTCCCGGACCT +
Preference number: 4 (lower is better)
Translates to: LSRELNTAILTGTWDTCSVEKSE*LTSPGP
Trigger: AGGTCCGGGACTGGTCAGCCACTCTGACTTTTCTAC...GCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGCATTTACAGAGTGGTTaGTCTTTCATGCCCTGCACA +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWHLQSG*SFMPCT
Trigger: TGTGCAGGGCATGAAAGACCAACCACTCTGTAAATG...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651933.1
3UTR CAA 72 bp CCAGTGGATAAGCACTCTTCCAGTGGGACACAGCGTTaGGTGACTGAGATACTGTTTCCTGTGACTTCCATT +
Preference number: 4 (lower is better)
Translates to: PVDKHSSSGTQR*VTEILFPVTSI
Trigger: AATGGAAGTCACAGGAAACAGTATCTCAGTCACCAAACGCTGTGTCCCACTGGAAGAGTGCTTATCCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGGGTTCCATGGCAGACTaGAGTGTCACTCATACAGAG +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWGSMAD*SVTHTE
Trigger: CTCTGTATGAGTGACACTTCAGTCTGCCATGGAACC...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACGTGAAGTCTCGGGACTaGGCAGCTTTCAGACAATCC +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDVKSRD*AAFRQS
Trigger: GGATTGTCTGAAAGCTGCTCAGTCCCGAGACTTCAC...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp CTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTATAGGATATGGTGTGGTTaGAGGATGGAGGTAGATAAT +
Preference number: 4 (lower is better)
Translates to: LVWFSLMEAPNCLLIASYRIWCG*RMEVDN
Trigger: ATTATCTACCTCCATCCTTCAACCACACCATATCCT...ATACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGGGGTGCCCATTTGTCTaGTTTATAGGTGACGTCGTG +
Preference number: 4 (lower is better)
Translates to: AREALVWSLSCFLFNHMQGCPFV*FIGDVV
Trigger: CACGACGTCACCTATAAATCAGACAAATGGGCACCC...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TTCGGGGCAGTGGCAAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTGGGTGCCCATTTGTCTaGTTTATAGGTGACGTCGTG +
Preference number: 4 (lower is better)
Translates to: FGAVASYRYFLHNKKCRPGCPFV*FIGDVV
Trigger: CACGACGTCACCTATAAATCAGACAAATGGGCACCC...AGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTTACTGTCAGGCCAATaGCTCATGCAGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLLLSGQ*LMQVCG
Trigger: TCCACAGACCTGCATGAGTCATTGGCCTGACAGTAA...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp ATTGAACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGACTCAGTCATCCCTGGGTGGTGGTTaGATCTGCACCACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: IEQMAGIVGITTLPGTQSSLGGG*ICTTVD
Trigger: GTCCACAGTGGTGCAGATTCAACCACCACCCAGGGA...TGACTGAGTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTCCCGGACCTTCCATGTaGATGACTCTTCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESPGPSM*MTLPWL
Trigger: GAGCCAAGGAAGAGTCATTCACATGGAAGGTCCGGG...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATTGGTCTGGTTCTCCTTaGTGGAGGCTCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHWSGSP*WRLQTV
Trigger: GACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCA...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp TCTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTAGCACTCATAATTGTCTaGTGCCTTTTCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SGLVLLDGGSKLSPHCLVALIIV*CLFTGE
Trigger: TTCACCTGTGAAAAGGCAGCAGACAATTATGAGTGC...TACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAGCACTCATAATTGTCTaGTGCCTTTTCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLALIIV*CLFTGE
Trigger: TTCACCTGTGAAAAGGCAGCAGACAATTATGAGTGC...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGCTGGAGCCCATCGGTTaGACTCATAATTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVLEPIG*THNCLL
Trigger: CAGCAGACAATTATGAGTGCAACCGATGGGCTCCAG...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGTCGCATATTATGCCTTaGTTCCCCATCATTCGAAAG +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMSHIMP*FPIIRK
Trigger: CTTTCGAATGATGGGGAAGCAAGGCATAATATGCGA...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTCATCTATGCAGAGTCTaGAAGCACTCCCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSHLCRV*KHSLGG
Trigger: ACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATG...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATAGCTGCGTGCGTGGCTaGAGGCCCGGCAGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHSCVRG*RPGSVK
Trigger: TTTCACACTGCCGGGCCTGCAGCCACGCACGCAGCT...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS-3UTR CCA 90 bp GTGGCACATAGCTTAATATACACATCATGGCTCTTTACACTTAAGCCATTACCACTCATACAGAGGGCCTaGGAGTGGGCACTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VAHSLIYTSWLFTLKPLPLIQRA*EWALRA
Trigger: TGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAG...TGGTAATGGCTTAAGTGTAAAGAGCCATGATGTGTATATTAAGCTATGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTCAGGGCCAGGTTCCATaGCAGACTGAAGTGTCACTC +
Preference number: 4 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESQGQVP*QTEVSL
Trigger: GAGTGACACTTCAGTCTGCCATGGAACCTGGCCCTG...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCAGGGCAGTAGATGTCTaGAGCCCATCGGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCRAVDV*SPSVAL
Trigger: GAGTGCAACCGATGGGCTCCAGACATCTACTGCCCT...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGAGTCTCTGCAGCCAGTaGATAAGCACTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLSLCSQ*ISTLPV
Trigger: CACTGGAAGAGTGCTTATCCACTGGCTGCAGAGACT...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGAGTCTCTGCAGCCAGTaGATAAGCACTCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVSLCSQ*ISTLPV
Trigger: CACTGGAAGAGTGCTTATCCACTGGCTGCAGAGACT...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACGAAGTGCAGACCTTGTaGCCTTCATGCTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDEVQTL*PSCSES
Trigger: AGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTC...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGTTCATTTCGGGGCAGTaGCAAGTTACAGATATTTCC +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWFISGQ*QVTDIS
Trigger: GGAAATATCTGTAACTTGCCACTGCCCCGAAATGAA...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCACGTCGTGGCAAATGTaGCATCAGTTTCATTTCGGG +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTTSWQM*HQFHFG
Trigger: CCCGAAATGAAACTGATGCCACATTTGCCACGACGT...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGCCATCGAGATCCCCATaGATCGCTATTAACACATGG +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIEPSRSP*IAINTW
Trigger: CCATGTGTTAATAGCGATCCATGGGGATCTCGATGG...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp AGCCAGAGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTGTGATTCCCAGCACTaGGAGAAGAATGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SQRHFSMEGRWTLTTLSSCDSQH*EKNVGK
Trigger: TTTCCCAACATTCTTCTCCCAGTGCTGGGAATCACA...AGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCTCTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGATGGAGTAAGAAGCTaGCTGAGCCACTTAGTCGGC +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSDGVRS*LSHLVG
Trigger: GCCGACTAAGTGGCTCAGCCAGCTTCTTACTCCATC...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGCAGCCAGGGAGGCTTTaGTGTGGTCACTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLQPGRL*CGHFLV
Trigger: AACAAGAAAGTGACCACACCAAAGCCTCCCTGGCTG...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGTTCCCATTGTTTTGCTaGAGCTCGGAAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIEFPLFC*SSEASS
Trigger: AGAAGAGGCTTCCGAGCTCCAGCAAAACAATGGGAA...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGTTTTCTTCTAGATCATaGTTCCTCGAGGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMFSSRS*FLEGSR
Trigger: TCTACTGCCCTCGAGGAACCATGATCTAGAAGAAAA...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp CATTGTGTGCTGAGTGTAGCAGTATCTGGTCTGGTTCTCCTTGATGGAGGCTCCTTTTCTTCTAGATCATaGTTCCTCGAGGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: HCVLSVAVSGLVLLDGGSFSSRS*FLEGSR
Trigger: TCTACTGCCCTCGAGGAACCATGATCTAGAAGAAAA...GGAGCCTCCATCAAGGAGAACCAGACCAGATACTGCTACACTCAGCACACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGGTTCCATGGCAGACTaGAGTGTCACTCATACAGAG +
Preference number: 4 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHGSMAD*SVTHTE
Trigger: CTCTGTATGAGTGACACTTCAGTCTGCCATGGAACC...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCGTGAAGTCTCGGGACTaGGCAGCTTTCAGACAATCC +
Preference number: 4 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCVKSRD*AAFRQS
Trigger: GGATTGTCTGAAAGCTGCTCAGTCCCGAGACTTCAC...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGGACACAGCGTTTGGTaGCTGAGATACTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHGHSVW*LRYCFL
Trigger: CAGGAAACAGTATCTCAGTCACCAAACGCTGTGTCC...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACGGACACAGCGTTTGGTaGCTGAGATACTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDGHSVW*LRYCFL
Trigger: CAGGAAACAGTATCTCAGTCACCAAACGCTGTGTCC...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp TTCGGGGCAGTGGCAAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTCTGATTTATAGGTaGCGTCGTGGCAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: FGAVASYRYFLHNKKCRPCLIYR*RRGKCG
Trigger: GCCACATTTGCCACGACGTCACCTATAAATCAGACA...AGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGTCTGATTTATAGGTaGCGTCGTGGCAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLCLIYR*RRGKCG
Trigger: GCCACATTTGCCACGACGTCACCTATAAATCAGACA...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGTGTCTGATTTATAGGTaGCGTCGTGGCAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVCLIYR*RRGKCG
Trigger: GCCACATTTGCCACGACGTCACCTATAAATCAGACA...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACGTGGCTCCATTAAGTTaGGGAAAATCCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDVAPLS*GKSSSR
Trigger: CCTGGAGGAGGATTTTCCTCAACTTAATGGAGCCAC...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGTCACAAAAACACATCTaGAAACCCTGCACACAAACT +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMSQKHI*KPCTQT
Trigger: AGTTTGTGTGCAGGGTTTTCAGATGTGTTTTTGTGA...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGGGGAGTCTCATTTTATaGGCCAGAGACATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWGSLIL*ARDIFL
Trigger: TAGAAAAATGTCTCTGGCTCATAAAATGAGACTCCC...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp ATTGAACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGACTCAGTCAACCTTGTGGCCTTCATaGTCGGAGTCTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: IEQMAGIVGITTLPGTQSTLWPS*SESLQP
Trigger: TGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGT...TGACTGAGTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTCATGGTAAGTGGCAATaGTTGGCTGTGATGACCTCC +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSHGKWQ*LAVMTS
Trigger: GGAGGTCATCACAGCCAAGCATTGCCACTTACCATG...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTCCAGATCTCGATAAATaGAGAACTACTTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: DTCSNIYAESASTPWVVVPDLDK*RTTSWN
Trigger: ATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGG...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGACCTACTGCATCTCATaGATGTATTCTTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: CQANDSCRSVDHRDPHGSTYCIS*MYSSKL
Trigger: TAATTTGGAAGAATACATGCATGAGATGCAGTAGGT...CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGTATAGCATCTTTAGATaGAACATCAACTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: CQANDSCRSVDHRDPHGSYSIFR*NINYLL
Trigger: GAGGAGATAGTTGATGTTGCATCTAAAGATGCTATA...CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGAAGAGAATTAAACACTaGCATTCTGACAGGCACATG +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEKRIKH*HSDRHM
Trigger: CATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTT...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGCACCAGGATATGGTGTaGTTGAAGGATGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVHQDMV*LKDGGR
Trigger: TCTACCTCCATCCTTCAACCACACCATATCCTGGTG...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGAGTGTAGCAGTATCTaGTCTCTCGAGGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHECSSI*SLEGSR
Trigger: TCTACTGCCCTCGAGAGACCAGATACTGCTACACTC...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334166.9
ENST00000409381.5
ENST00000651933.1
CDS-3UTR CCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGAGTGTAGCAGTATCTaGTCTCTCGAGGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSECSSI*SLEGSR
Trigger: TCTACTGCCCTCGAGAGACCAGATACTGCTACACTC...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334166.9
ENST00000409381.5
ENST00000651933.1
CDS-3UTR CCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACGAGTGTAGCAGTATCTaGTCTCTCGAGGGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDECSSI*SLEGSR
Trigger: TCTACTGCCCTCGAGAGACCAGATACTGCTACACTC...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334166.9
ENST00000409381.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGCCATCGAGATCCCCATaGATCGCTATTAACACATGG +
Preference number: 4 (lower is better)
Translates to: AREALVWSLSCFLFNHMQPSRSP*IAINTW
Trigger: CCATGTGTTAATAGCGATCCATGGGGATCTCGATGG...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGTTATGGTATGGAACTTaGGCTGTACTGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIELWYGT*AVLTEG
Trigger: GCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAA...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCCAAACGTTTATGGTATaGAACTTGGGCTGTACTGAC +
Preference number: 4 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPQTFMV*NLGCTD
Trigger: GTCAGTACAGCCCAAGTTCCATACCATAAACGTTTG...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CAA 72 bp GATAACAGCCACTTTATGGACAGTGGCTCCATTAAGTaGAGGAAAATCCTCCTCCAGGCACCCCCACAAATA +
Preference number: 4 (lower is better)
Translates to: DNSHFMDSGSIK*RKILLQAPPQI
Trigger: TATTTGTGGGGGTGCCTGGAGGAGGATTTTCCTCAACTTAATGGAGCCACTGTCCATAAAGTGGCTGTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGAGGATATGGTGTGGTTaGAGGATGGAGGTAGATAAT +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIERIWCG*RMEVDN
Trigger: ATTATCTACCTCCATCCTTCAACCACACCATATCCT...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp CTTTCAAGAGAATTAAACACTGCCATTCTGACAGGCACATGGGACACATGCAGCAGATACTGTTTCCTGTaGCTTCCATTGTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSRELNTAILTGTWDTCSRYCFL*LPLCAE
Trigger: CTCAGCACACAATGGAAGTCACAGGAAACAGTATCT...GCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGAGATACTGTTTCCTGTaGCTTCCATTGTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVRYCFL*LPLCAE
Trigger: CTCAGCACACAATGGAAGTCACAGGAAACAGTATCT...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGAGATACTGTTTCCTGTaGCTTCCATTGTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLRYCFL*LPLCAE
Trigger: CTCAGCACACAATGGAAGTCACAGGAAACAGTATCT...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCGGACACAGCGTTTGGTaGCTGAGATACTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCGHSVW*LRYCFL
Trigger: CAGGAAACAGTATCTCAGTCACCAAACGCTGTGTCC...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGAACTTGGGCTGTACTaGCAGAAGGCTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSELGLY*QKALMS
Trigger: ACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTC...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTAGGGCAGATGGACCCTaGCAACACTGTCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESRADGP*QHCPLY
Trigger: ATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCT...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATTCTGTGAAATCTTCCTaGTCTTCCTCCCAACCAGGT +
Preference number: 4 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHSVKSS*SSSQPG
Trigger: ACCTGGTTGGGAGGAAGATCAGGAAGATTTCACAGA...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTCATGCTCGGAGTCTCTaGAGCCAGTGGATAAGCACT +
Preference number: 4 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTHARSL*SQWIST
Trigger: AGTGCTTATCCACTGGCTGCAGAGACTCCGAGCATG...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GGCCCTCAGAATGAACTAGGACTAATCTCCACACATTTTTCCTTTCATTCTGAACAGGCCAATGACTCATaGAGGTCTGTGGACCATCGA +
Preference number: 4 (lower is better)
Translates to: GPQNELGLISTHFSFHSEQANDS*RSVDHR
Trigger: TCGATGGTCCACAGACCTGCATGAGTCATTGGCCTG...TTCAGAATGAAAGGAAAAATGTGTGGAGATTAGTCCTAGTTCATTCTGAGGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGCATCATCGCATATTATaGCTTGCTTCCCCATCATTC +
Preference number: 4 (lower is better)
Translates to: TCVITVRPMTHAGLWTIEHHRIL*LASPSF
Trigger: GAATGATGGGGAAGCAAGGCATAATATGCGATGATG...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTCTGTATCAGAGTTACTaGTGTCAGTTCATATTTAGT +
Preference number: 4 (lower is better)
Translates to: DTCSNIYAESASTPWVVVLYQSY*CQFIFS
Trigger: ACTAAATATGAACTGACAGCAGTAACTCTGATACAG...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTCATCTATGCAGAGTCTaGAAGCACTCCCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTHLCRV*KHSLGG
Trigger: ACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATG...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGAGGTTGTTCTTTATGTaGATTTACAGAGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMRLFFM*IYRVVG
Trigger: ACCAACCACTCTGTAAATGCACATAAAGAACAACCT...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR GCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGTCACACAGTAGCTTTTaGATAACTTTTTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATESHSSF*ITFSQA
Trigger: AGCCTGAGAAAAAGTTATGCAAAAGCTACTGTGTGA...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCCAGGGCCAGGTTCCATaGCAGACTGAAGTGTCACTC +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGQGQVP*QTEVSL
Trigger: GAGTGACACTTCAGTCTGCCATGGAACCTGGCCCTG...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACCACCAGGATATGGTGTaGTTGAAGGATGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDHQDMV*LKDGGR
Trigger: TCTACCTCCATCCTTCAACCACACCATATCCTGGTG...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAAGGGCAGTAGATGTCTaGAGCCCATCGGTTGCACTC +
Preference number: 4 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSRAVDV*SPSVAL
Trigger: GAGTGCAACCGATGGGCTCCAGACATCTACTGCCCT...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTACGTCGTGGCAAATGTaGCATCAGTTTCATTTCGGG +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSTSWQM*HQFHFG
Trigger: CCCGAAATGAAACTGATGCCACATTTGCCACGACGT...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACACGTCGTGGCAAATGTaGCATCAGTTTCATTTCGGG +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDTSWQM*HQFHFG
Trigger: CCCGAAATGAAACTGATGCCACATTTGCCACGACGT...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACCCATCGAGATCCCCATaGATCGCTATTAACACATGG +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDPSRSP*IAINTW
Trigger: CCATGTGTTAATAGCGATCCATGGGGATCTCGATGG...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp AGTTTCATTTCGGGGCAGTGGCAAGTTACAGATATTTCCTTCACAACAAGAAGTACTCATGCAGGTCTGTaGACCATCGAGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: SFISGQWQVTDISFTTRSTHAGL*TIEIPM
Trigger: CATGGGGATCTCGATGGTCCACAGACCTGCATGAGT...ACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAAATGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp TCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACAGATATATTCCTCATGGTAAGTaGCAATGCTTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SWQMWHQFHFGAVASYRYIPHGK*QCLAVM
Trigger: CATCACAGCCAAGCATTGCCACTTACCATGAGGAAT...ATATCTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGTTATGGTATGGAACTTaGGCTGTACTGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWLWYGT*AVLTEG
Trigger: GCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAA...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGTTATGGTATGGAACTTaGGCTGTACTGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVLWYGT*AVLTEG
Trigger: GCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAA...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCCAAACGTTTATGGTATaGAACTTGGGCTGTACTGAC +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTQTFMV*NLGCTD
Trigger: GTCAGTACAGCCCAAGTTCCATACCATAAACGTTTG...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGGAAAACAAACGTTTATaGTATGGAACTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEENKRL*YGTWAV
Trigger: TACAGCCCAAGTTCCATACCATAAACGTTTGTTTTC...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000651933.1
CDS-3UTR CCA 90 bp AGCCAGAGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTAATGGCTGGAATTGTTaGAATTACTACTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SQRHFSMEGRWTLTTLSSNGWNC*NYYSSR
Trigger: CCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATT...AGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCTCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAGTTTGGAGTCAAAGTCACTGGGGATTTaGAAGTGGGAGCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FQGLSQNFQGNSPFSLESKSLGI*KWELFG
Trigger: GCCAAAGAGCTCCCACTTCCAAATCCCCAGTGACTT...TGACTCCAAACTGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGTGTGCATTTACAGAGTaGTTGGTCTTTCATGCCCTG +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWCAFTE*LVFHAL
Trigger: CAGGGCATGAAAGACCAACCACTCTGTAAATGCACA...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651933.1
CDS-3UTR TCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGAGGATATGGTGTGGTTaGAGGATGGAGGTAGATAAT +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVRIWCG*RMEVDN
Trigger: ATTATCTACCTCCATCCTTCAACCACACCATATCCT...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTAGATACTGTTTCCTGTaGCTTCCATTGTGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSRYCFL*LPLCAE
Trigger: CTCAGCACACAATGGAAGTCACAGGAAACAGTATCT...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp TTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAGTTTGGAGTCATGTCTGATTTATAGGTaGCGTCGTGGCAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: FQGLSQNFQGNSPFSLESCLIYR*RRGKCG
Trigger: GCCACATTTGCCACGACGTCACCTATAAATCAGACA...TGACTCCAAACTGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCAGTCAAGGAGAAGGCTaGTCTCACCAATTATATGAA +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTSQGEG*SHQLYE
Trigger: TTCATATAATTGGTGAGATCAGCCTTCTCCTTGACT...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTAGGGCAGATGGACCCTaGCAACACTGTCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTRADGP*QHCPLY
Trigger: ATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCT...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GGCCCTCAGAATGAACTAGGACTAATCTCCACACATTTTTCCTTTCATTCTGAAAGCAAGAGGGATGAATaGGGAAGCCAAACCCCTACT +
Preference number: 4 (lower is better)
Translates to: GPQNELGLISTHFSFHSESKRDE*GSQTPT
Trigger: AGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCT...TTCAGAATGAAAGGAAAAATGTGTGGAGATTAGTCCTAGTTCATTCTGAGGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAATCCCTGGGTGGTGGTTaGATCTGCACCACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKSLGGG*ICTTVD
Trigger: GTCCACAGTGGTGCAGATTCAACCACCACCCAGGGA...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTCTTCTTTCTCTTGCTTaGGATTGCTCAAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSLLSLA*DCSRRL
Trigger: CAACCTCCTTGAGCAATCTCAAGCAAGAGAAAGAAG...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR GCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGCACTCATAATTGTCTaGTGCCTTTTCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVALIIV*CLFTGE
Trigger: TTCACCTGTGAAAAGGCAGCAGACAATTATGAGTGC...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGGCACTCATAATTGTCTaGTGCCTTTTCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: AREALVWSLSCFLFNHMQALIIV*CLFTGE
Trigger: TTCACCTGTGAAAAGGCAGCAGACAATTATGAGTGC...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGTTTGGCAGTATGAACTaGAGATGGAGTAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AREALVWSLSCFLFNHMQFGSMN*RWSKKL
Trigger: CAGCTTCTTACTCCATCTGCAGTTCATACTGCCAAA...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTCGCATATTATGCCTTaGTTCCCCATCATTCGAAAG +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLSHIMP*FPIIRK
Trigger: CTTTCGAATGATGGGGAAGCAAGGCATAATATGCGA...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTATTGAGACAAACATATTaGTCTTGCCTACATGTTAAC +
Preference number: 4 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLLRQTY*SCLHVN
Trigger: GTTAACATGTAGGCAAGAGCAATATGTTTGTCTCAA...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGTCTTATTCAATCACATaGAGTACTTGGAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWSYSIT*STWKMS
Trigger: TGACATCTTCCAAGTACTGCATGTGATTGAATAAGA...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTTTTTCCCATTGTTTTaGTGGAGCTCGGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDFFPLF*WSSEAS
Trigger: AGAGGCTTCCGAGCTCCAGCAAAACAATGGGAAAAA...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CCA 90 bp TTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCTCCAGAAGTGCAGACCTTGTaGCCTTCATGCTCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LCLASPSFERQFNAESSPEVQTL*PSCSES
Trigger: AGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTC...TGGAGAAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACAGATATTTCATTTCGGGGCAGTaGCAAGTTACAGATATTTCC +
Preference number: 4 (lower is better)
Translates to: SWQMWHQFHFGAVASYRYFISGQ*QVTDIS
Trigger: GGAAATATCTGTAACTTGCCACTGCCCCGAAATGAA...ATATCTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCCCATCGAGATCCCCATaGATCGCTATTAACACATGG +
Preference number: 4 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCPSRSP*IAINTW
Trigger: CCATGTGTTAATAGCGATCCATGGGGATCTCGATGG...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAACTCATGCAGGTCTGTaGACCATCGAGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSTHAGL*TIEIPM
Trigger: CATGGGGATCTCGATGGTCCACAGACCTGCATGAGT...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTATTCCTCATGGTAAGTaGCAATGCTTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSIPHGK*QCLAVM
Trigger: CATCACAGCCAAGCATTGCCACTTACCATGAGGAAT...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGCAAACGTTTATGGTATaGAACTTGGGCTGTACTGAC +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLQTFMV*NLGCTD
Trigger: GTCAGTACAGCCCAAGTTCCATACCATAAACGTTTG...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATAGTATGAACTGCAGATaGAGTAAGAAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHSMNCR*SKKLAE
Trigger: CTCAGCCAGCTTCTTACTCCATCTGCAGTTCATACT...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGATCACATGCAGTACTTaGAAGATGTCAGTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWITCST*KMSVEC
Trigger: ACACTCCACTGACATCTTCCAAGTACTGCATGTGAT...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGATCACATGCAGTACTTaGAAGATGTCAGTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: AREALVWSLSCFLFNHMQITCST*KMSVEC
Trigger: ACACTCCACTGACATCTTCCAAGTACTGCATGTGAT...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAGGTTCCATGGCAGACTaGAGTGTCACTCATACAGAG +
Preference number: 4 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSGSMAD*SVTHTE
Trigger: CTCTGTATGAGTGACACTTCAGTCTGCCATGGAACC...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATAGGATATGGTGTGGTTaGAGGATGGAGGTAGATAAT +
Preference number: 4 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHRIWCG*RMEVDN
Trigger: ATTATCTACCTCCATCCTTCAACCACACCATATCCT...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCGGACACAGCGTTTGGTaGCTGAGATACTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGGHSVW*LRYCFL
Trigger: CAGGAAACAGTATCTCAGTCACCAAACGCTGTGTCC...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp AGTTTCATTTCGGGGCAGTGGCAAGTTACAGATATTTCCTTCACAACAAGAAGTTGTCTGATTTATAGGTaGCGTCGTGGCAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: SFISGQWQVTDISFTTRSCLIYR*RRGKCG
Trigger: GCCACATTTGCCACGACGTCACCTATAAATCAGACA...ACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAAATGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR TCA 90 bp GTGGCACATAGCTTAATATACACATCATGGCTCTTTACACTTAAGCCATTACCATTACTGTCAGGCCAATaGCTCATGCAGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VAHSLIYTSWLFTLKPLPLLSGQ*LMQVCG
Trigger: TCCACAGACCTGCATGAGTCATTGGCCTGACAGTAA...TGGTAATGGCTTAAGTGTAAAGAGCCATGATGTGTATATTAAGCTATGTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCTTACTGTCAGGCCAATaGCTCATGCAGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGLLSGQ*LMQVCG
Trigger: TCCACAGACCTGCATGAGTCATTGGCCTGACAGTAA...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR TCA 90 bp GCATTTGCAGGGAGGAGCCTGGTAAGATACACTCAAAACCTTTATTCATTGATTGAACTTGGGCTGTACTaGCAGAAGGCTTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: AFAGRSLVRYTQNLYSLIELGLY*QKALMS
Trigger: ACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTC...AATCAATGAATAAAGGTTTTGAGTGTATCTTACCAGGCTCCTCCCTGCAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR TCA 90 bp TTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCTCCAAGTCGGCCCTCAGAATaGACTAGGACTAATCTCCAC +
Preference number: 4 (lower is better)
Translates to: LCLASPSFERQFNAESSPSRPSE*TRTNLH
Trigger: GTGGAGATTAGTCCTAGTTCATTCTGAGGGCCGACT...TGGAGAAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTAGCTCTTTGGCAGTATaGACTGCAGATGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESSSLAV*TADGVR
Trigger: TCTTACTCCATCTGCAGTTCATACTGCCAAAGAGCT...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTCCTGCAACAGCAGGGTaGGATAAACTCCACATGATA +
Preference number: 4 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTPATAG*DKLHMI
Trigger: TATCATGTGGAGTTTATCTCACCCTGCTGTTGCAGG...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGCACTCATAATTGTCTaGTGCCTTTTCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSALIIV*CLFTGE
Trigger: TTCACCTGTGAAAAGGCAGCAGACAATTATGAGTGC...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR GCA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCACTGGAGCCCATCGGTTaGACTCATAATTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSLEPIG*THNCLL
Trigger: CAGCAGACAATTATGAGTGCAACCGATGGGCTCCAG...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCGCCTCTTCTTTCTCTTaGTTGAGATTGCTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCASSFS*LRLLKE
Trigger: CTCCTTGAGCAATCTCAAGCAAGAGAAAGAAGAGGC...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392854.4
CDS-3UTR CCA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTTCATTTCGGGGCAGTaGCAAGTTACAGATATTTCC +
Preference number: 4 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDFISGQ*QVTDIS
Trigger: GGAAATATCTGTAACTTGCCACTGCCCCGAAATGAA...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCGAAAACAAACGTTTATaGTATGGAACTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTENKRL*YGTWAV
Trigger: TACAGCCCAAGTTCCATACCATAAACGTTTGTTTTC...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATTCTATGGAGGGCAGATaGACCCTGACAACACTGTCC +
Preference number: 4 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHSMEGR*TLTTLS
Trigger: GGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGA...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCTCCACATGATAAGATaGATGAATTCCTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDLHMIR*MNSYEV
Trigger: GACTTCATAGGAATTCATCCATCTTATCATGTGGAG...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAACAAGCACTCCCTGGGTaGTGGTTGAATCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKQALPG*WLNLHH
Trigger: GTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTG...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTTCACAAAAACACATCTaGAAACCCTGCACACAAACT +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSSQKHI*KPCTQT
Trigger: AGTTTGTGTGCAGGGTTTTCAGATGTGTTTTTGTGA...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTCTTCACAACAAGAAGTaGAGACCTTGTGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTLHNKK*RPCGLH
Trigger: ATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAG...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACACCTACTGCATCTCATaGATGTATTCTTCCAAATTA +
Preference number: 4 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDTYCIS*MYSSKL
Trigger: TAATTTGGAAGAATACATGCATGAGATGCAGTAGGT...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAGTTTGGAGTCAAGTCTCAGGACCTACTaGATCTCATGCATGTATTCT +
Preference number: 4 (lower is better)
Translates to: FQGLSQNFQGNSPFSLESSLRTY*ISCMYS
Trigger: AGAATACATGCATGAGATGCAGTAGGTCCTGAGACT...TGACTCCAAACTGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAGTTTGGAGTCAGCCCACATCTATACATaGCCCTATAACATACTCCTA +
Preference number: 4 (lower is better)
Translates to: FQGLSQNFQGNSPFSLESAHIYT*PYNILL
Trigger: TAGGAGTATGTTATAGGGGCATGTATAGATGTGGGC...TGACTCCAAACTGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTCTGGCACATACGAGGTaGTTAATAAATGTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSLAHTR*LINVLL
Trigger: AAGCAAGACATTTATTAAGCACCTCGTATGTGCCAG...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACTATAGCATCTTTAGATaGAACATCAACTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDYSIFR*NINYLL
Trigger: GAGGAGATAGTTGATGTTGCATCTAAAGATGCTATA...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGATTTAACAAAGACATaGTCTTGGGAAGCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSDLTKT*SWEAVD
Trigger: GTCTACAGCTTCCCAAGAGCATGTCTTTGTTAAATC...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR GCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGAGGTTGTTCTTTATGTaGATTTACAGAGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWRLFFM*IYRVVG
Trigger: ACCAACCACTCTGTAAATGCACATAAAGAACAACCT...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR GCA 90 bp GTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGTCACACAGTAGCTTTTaGATAACTTTTTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VVSHMCNYCQANDSCRSVSHSSF*ITFSQA
Trigger: AGCCTGAGAAAAAGTTATGCAAAAGCTACTGTGTGA...CACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR GCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCGTGAGGGCTGTTCTCTaGTTCCAAAATAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGVRAVL*FQNSAL
Trigger: CAAGGCACTATTTTGGAAGCAGAGAACAGCCCTCAC...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR GCA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTAAACTGTCTCCTCATTaGCTCGTATATACCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSKLSPH*LVYTLR
Trigger: TCTCAAGGTATATACGAGGCAATGAGGAGACAGTTT...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CCA 90 bp TTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCTCCACACCAGGATATGGTGTaGTTGAAGGATGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LCLASPSFERQFNAESSPHQDMV*LKDGGR
Trigger: TCTACCTCCATCCTTCAACCACACCATATCCTGGTG...TGGAGAAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCACGTCGTGGCAAATGTaGCATCAGTTTCATTTCGGG +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGTSWQM*HQFHFG
Trigger: CCCGAAATGAAACTGATGCCACATTTGCCACGACGT...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAACGTCGTGGCAAATGTaGCATCAGTTTCATTTCGGG +
Preference number: 4 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSTSWQM*HQFHFG
Trigger: CCCGAAATGAAACTGATGCCACATTTGCCACGACGT...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGGAAAACAAACGTTTATaGTATGGAACTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWENKRL*YGTWAV
Trigger: TACAGCCCAAGTTCCATACCATAAACGTTTGTTTTC...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000651933.1
CDS-3UTR CCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCGAAGTGGGAGCTCTTTaGCAGTATGAACTGCAGATG +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGEVGAL*QYELQM
Trigger: CATCTGCAGTTCATACTGCCAAAGAGCTCCCACTTC...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GCATATTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCTGGGGATTTGGAAGTaGGAGCTCTTTGGCAGTATG +
Preference number: 4 (lower is better)
Translates to: AYYALLPHHSKDNLMQNLLGIWK*ELFGSM
Trigger: CATACTGCCAAAGAGCTCCCACTTCCAAATCCCCAG...AAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCAAGTCACTGGGGATTTaGAAGTGGGAGCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTKSLGI*KWELFG
Trigger: GCCAAAGAGCTCCCACTTCCAAATCCCCAGTGACTT...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTTTGCAATCACCTCACTaGTCTACTTTCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESLQSPH*STFSSS
Trigger: TGATGAGGAGAAAGTAGACCAGTGAGGTGATTGCAA...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTAGGGAGGCTTTGGTGTaGTCACTTTCTTGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESREALV*SLSCFL
Trigger: TAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCT...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GCATATTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCAGCCAGGGAGGCTTTaGTGTGGTCACTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: AYYALLPHHSKDNLMQNLQPGRL*CGHFLV
Trigger: AACAAGAAAGTGACCACACCAAAGCCTCCCTGGCTG...AAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCACAGCGTTTGGTGACTaGGATACTGTTTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTTAFGD*DTVSCD
Trigger: GTCACAGGAAACAGTATCTCAGTCACCAAACGCTGT...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTAAGTCAAGGAGAAGGCTaGTCTCACCAATTATATGAA +
Preference number: 4 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLSQGEG*SHQLYE
Trigger: TTCATATAATTGGTGAGATCAGCCTTCTCCTTGACT...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTAAGAAAAACTTCCCATTaGGTCTCCTTGTTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLRKTSH*VSLLVL
Trigger: CAAGACTAACAAGGAGACTCAATGGGAAGTTTTTCT...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GCATATTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCCTGCAACAGCAGGGTaGGATAAACTCCACATGATA +
Preference number: 4 (lower is better)
Translates to: AYYALLPHHSKDNLMQNLPATAG*DKLHMI
Trigger: TATCATGTGGAGTTTATCTCACCCTGCTGTTGCAGG...AAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp AGTTTCATTTCGGGGCAGTGGCAAGTTACAGATATTTCCTTCACAACAAGAAGTGCCTCGTATATACCTTaGGACATAGTACCACAACTT +
Preference number: 4 (lower is better)
Translates to: SFISGQWQVTDISFTTRSASYIP*DIVPQL
Trigger: AAGTTGTGGTACTATGTCTCAAGGTATATACGAGGC...ACTTCTTGTTGTGAAGGAAATATCTGTAACTTGCCACTGCCCCGAAATGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAACTGGAGCCCATCGGTTaGACTCATAATTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKLEPIG*THNCLL
Trigger: CAGCAGACAATTATGAGTGCAACCGATGGGCTCCAG...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp ATTGAACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGACTCAGTCAGCCCACATCTATACATaGCCCTATAACATACTCCTA +
Preference number: 4 (lower is better)
Translates to: IEQMAGIVGITTLPGTQSAHIYT*PYNILL
Trigger: TAGGAGTATGTTATAGGGGCATGTATAGATGTGGGC...TGACTGAGTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTTTGGCAGTATGAACTaGAGATGGAGTAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTFGSMN*RWSKKL
Trigger: CAGCTTCTTACTCCATCTGCAGTTCATACTGCCAAA...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTCTTATTCAATCACATaGAGTACTTGGAAGATGTCA +
Preference number: 4 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLSYSIT*STWKMS
Trigger: TGACATCTTCCAAGTACTGCATGTGATTGAATAAGA...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATATGCAGCAACATCTATaGAGAGTCTGCAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHMQQHL*RVCKHS
Trigger: GGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCAT...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GCATATTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTATGCAGCAACATCTATaGAGAGTCTGCAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: AYYALLPHHSKDNLMQNLMQQHL*RVCKHS
Trigger: GGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCAT...AAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCGCCTCTTCTTTCTCTTaGTTGAGATTGCTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGASSFS*LRLLKE
Trigger: CTCCTTGAGCAATCTCAAGCAAGAGAAAGAAGAGGC...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATCACCAGGATATGGTGTaGTTGAAGGATGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHHQDMV*LKDGGR
Trigger: TCTACCTCCATCCTTCAACCACACCATATCCTGGTG...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GGCCCTCAGAATGAACTAGGACTAATCTCCACACATTTTTCCTTTCATTCTGAATTCATTTCGGGGCAGTaGCAAGTTACAGATATTTCC +
Preference number: 4 (lower is better)
Translates to: GPQNELGLISTHFSFHSEFISGQ*QVTDIS
Trigger: GGAAATATCTGTAACTTGCCACTGCCCCGAAATGAA...TTCAGAATGAAAGGAAAAATGTGTGGAGATTAGTCCTAGTTCATTCTGAGGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCATTCCTCATGGTAAGTaGCAATGCTTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGIPHGK*QCLAVM
Trigger: CATCACAGCCAAGCATTGCCACTTACCATGAGGAAT...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CCA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATAAAACAACTCCATCCTaGTTTGGGGCTCTGGACACA +
Preference number: 4 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHKTTPS*FGALDT
Trigger: TGTGTCCAGAGCCCCAAACCAGGATGGAGTTGTTTT...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GCATATTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTGAAGTGGGAGCTCTTTaGCAGTATGAACTGCAGATG +
Preference number: 4 (lower is better)
Translates to: AYYALLPHHSKDNLMQNLEVGAL*QYELQM
Trigger: CATCTGCAGTTCATACTGCCAAAGAGCTCCCACTTC...AAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCTCCAAGGATATGGTGTGGTTaGAGGATGGAGGTAGATAAT +
Preference number: 4 (lower is better)
Translates to: LCLASPSFERQFNAESSPRIWCG*RMEVDN
Trigger: ATTATCTACCTCCATCCTTCAACCACACCATATCCT...TGGAGAAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp ATTGAACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGACTCAGTCAGAATCTAGGATCTCATaGAGCATAATTAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: IEQMAGIVGITTLPGTQSESRIS*SIIRCQ
Trigger: TTGGCACCTAATTATGCTTCATGAGATCCTAGATTC...TGACTGAGTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTCCATGGAAAAATCCTTaGGACAAACATATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESPWKNP*DKHIAL
Trigger: AAGAGCAATATGTTTGTCTCAAGGATTTTTCCATGG...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GGCCCTCAGAATGAACTAGGACTAATCTCCACACATTTTTCCTTTCATTCTGAAGGGAGTCTCATTTTATaGGCCAGAGACATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: GPQNELGLISTHFSFHSEGSLIL*ARDIFL
Trigger: TAGAAAAATGTCTCTGGCTCATAAAATGAGACTCCC...TTCAGAATGAAAGGAAAAATGTGTGGAGATTAGTCCTAGTTCATTCTGAGGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCGCCTCGTATATACCTTaGGACATAGTACCACAACTT +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGASYIP*DIVPQL
Trigger: AAGTTGTGGTACTATGTCTCAAGGTATATACGAGGC...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR GCA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTAAGAGAATTAAACACTaGCATTCTGACAGGCACATG +
Preference number: 4 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTKRIKH*HSDRHM
Trigger: CATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTT...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCATTCCTCATGGTAAGTaGCAATGCTTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTIPHGK*QCLAVM
Trigger: CATCACAGCCAAGCATTGCCACTTACCATGAGGAAT...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp ATTGAACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGACTCAGTCAAATGGCTGGAATTGTTaGAATTACTACTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: IEQMAGIVGITTLPGTQSNGWNC*NYYSSR
Trigger: CCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATT...TGACTGAGTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp GCATATTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTTGTGATTCCCAGCACTaGGAGAAGAATGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: AYYALLPHHSKDNLMQNLCDSQH*EKNVGK
Trigger: TTTCCCAACATTCTTCTCCCAGTGCTGGGAATCACA...AAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCAGTATGAACTGCAGATaGAGTAAGAAGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTSMNCR*SKKLAE
Trigger: CTCAGCCAGCTTCTTACTCCATCTGCAGTTCATACT...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTCTCCACATGATAAGATaGATGAATTCCTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESLHMIR*MNSYEV
Trigger: GACTTCATAGGAATTCATCCATCTTATCATGTGGAG...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAAGGGAGGCTTTGGTGTaGTCACTTTCTTGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSREALV*SLSCFL
Trigger: TAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCT...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GGCCCTCAGAATGAACTAGGACTAATCTCCACACATTTTTCCTTTCATTCTGAACCAGATCTCGATAAATaGAGAACTACTTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GPQNELGLISTHFSFHSEPDLDK*RTTSWN
Trigger: ATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGG...TTCAGAATGAAAGGAAAAATGTGTGGAGATTAGTCCTAGTTCATTCTGAGGGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GCATATTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCATCATCGCATATTATaGCTTGCTTCCCCATCATTC +
Preference number: 4 (lower is better)
Translates to: AYYALLPHHSKDNLMQNLHHRIL*LASPSF
Trigger: GAATGATGGGGAAGCAAGGCATAATATGCGATGATG...AAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATTTCATTTCGGGGCAGTaGCAAGTTACAGATATTTCC +
Preference number: 4 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHFISGQ*QVTDIS
Trigger: GGAAATATCTGTAACTTGCCACTGCCCCGAAATGAA...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATTTGCAATCACCTCACTaGTCTACTTTCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHLQSPH*STFSSS
Trigger: TGATGAGGAGAAAGTAGACCAGTGAGGTGATTGCAA...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAATTGCGTTTGAGCTTTaGTACCTTCATTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSIAFEL*YLHLGS
Trigger: ACTTCCCAAATGAAGGTACCAAAGCTCAAACGCAAT...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp TGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTTGTAGGTATGTACAACATGAATCTAGGATCTCATaGAGCATAATTAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: CQWSVIMHKNGTCRYVQHESRIS*SIIRCQ
Trigger: TTGGCACCTAATTATGCTTCATGAGATCCTAGATTC...ATGTTGTACATACCTACAAGTACCATTTTTGTGCATGATTACACTCCACTGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCAGAAAAACTTCCCATTaGGTCTCCTTGTTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTRKTSH*VSLLVL
Trigger: CAAGACTAACAAGGAGACTCAATGGGAAGTTTTTCT...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR TCA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCCCATGGAAAAATCCTTaGGACAAACATATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGPWKNP*DKHIAL
Trigger: AAGAGCAATATGTTTGTCTCAAGGATTTTTCCATGG...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAAAGTCTCAGGACCTACTaGATCTCATGCATGTATTCT +
Preference number: 4 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKSLRTY*ISCMYS
Trigger: AGAATACATGCATGAGATGCAGTAGGTCCTGAGACT...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCTGCCTTTTTGTCTTCTaGACAGAACAGAGGAAATGT +
Preference number: 4 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTCLFVF*TEQRKC
Trigger: ACATTTCCTCTGTTCTGTGCAGAAGACAAAAAGGCA...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp GCATTTGCAGGGAGGAGCCTGGTAAGATACACTCAAAACCTTTATTCATTGATTCTGTATCAGAGTTACTaGTGTCAGTTCATATTTAGT +
Preference number: 4 (lower is better)
Translates to: AFAGRSLVRYTQNLYSLILYQSY*CQFIFS
Trigger: ACTAAATATGAACTGACAGCAGTAACTCTGATACAG...AATCAATGAATAAAGGTTTTGAGTGTATCTTACCAGGCTCCTCCCTGCAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR GCA 90 bp GCATTTGCAGGGAGGAGCCTGGTAAGATACACTCAAAACCTTTATTCATTGATTTCTTGTATCTTCTCATaGATGTATTCTTGTCTACAC +
Preference number: 4 (lower is better)
Translates to: AFAGRSLVRYTQNLYSLISCIFS*MYSCLH
Trigger: GTGTAGACAAGAATACATGCATGAGAAGATACAAGA...AATCAATGAATAAAGGTTTTGAGTGTATCTTACCAGGCTCCTCCCTGCAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR CCA 90 bp GGCCCTCAGAATGAACTAGGACTAATCTCCACACATTTTTCCTTTCATTCTGAATGTCTAGATTATCTATaGCTGAATAGAACCCCATAT +
Preference number: 4 (lower is better)
Translates to: GPQNELGLISTHFSFHSECLDYL*LNRTPY
Trigger: ATATGGGGTTCTATTCAGCCATAGATAATCTAGACA...TTCAGAATGAAAGGAAAAATGTGTGGAGATTAGTCCTAGTTCATTCTGAGGGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
3UTR CAA 72 bp CTTCACAACATTGCGTTTGAGCTTTGGTACCTTCATTaGGGAAGTGTAAATGCTAGTAACATTCTTTATAGG +
Preference number: 4 (lower is better)
Translates to: LHNIAFELWYLH*GSVNASNILYR
Trigger: CCTATAAAGAATGTTACTAGCATTTACACTTCCCAAATGAAGGTACCAAAGCTCAAACGCAATGTTGTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAATGCCTTTTTGTCTTCTaGACAGAACAGAGGAAATGT +
Preference number: 4 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKCLFVF*TEQRKC
Trigger: ACATTTCCTCTGTTCTGTGCAGAAGACAAAAAGGCA...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTCTCCATTGAGACAAACATATTaGTCTTGCCTACATGTTAAC +
Preference number: 4 (lower is better)
Translates to: LCLASPSFERQFNAESSPLRQTY*SCLHVN
Trigger: GTTAACATGTAGGCAAGAGCAATATGTTTGTCTCAA...TGGAGAAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR GCA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAACTGGCACATACGAGGTaGTTAATAAATGTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKLAHTR*LINVLL
Trigger: AAGCAAGACATTTATTAAGCACCTCGTATGTGCCAG...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAAATAACAGCCACTTTATaGACAGTGGCTCCATTAAGT +
Preference number: 4 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKITATL*TVAPLS
Trigger: ACTTAATGGAGCCACTGTCCATAAAGTGGCTGTTAT...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CCA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCTGTCTAGATTATCTATaGCTGAATAGAACCCCATAT +
Preference number: 4 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTCLDYL*LNRTPY
Trigger: ATATGGGGTTCTATTCAGCCATAGATAATCTAGACA...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS GCA 90 bp TGCACCCGGGCTGCGCGCGGATTCCGGCCGCCAGCTGCAGCCCGCTaGCCCATCCCACGAACACTGCGGCGCCCCCAGAGTGTGCAATGC +
Preference number: 5 (lower is better)
Translates to: CTRAARGFRPPAAAR*PIPRTLRRPQSVQC
Trigger: GCATTGCACACTCTGGGGGCGCCGCAGTGTTCGTGGGATGGGGCAGCGGGCTGCAGCTGGCGGCCGGAATCCGCGCGCAGCCCGGGTGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS GCA 90 bp GGAGAGAACTTGCACCCGGGCTGCGCGCGGATTCCGGCCGCCAGCTaGAGCCCGCTGCCCCATCCCACGAACACTGCGGCGCCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GENLHPGCARIPAAS*SPLPHPTNTAAPPE
Trigger: CTCTGGGGGCGCCGCAGTGTTCGTGGGATGGGGCAGCGGGCTGCAGCTGGCGGCCGGAATCCGCGCGCAGCCCGGGTGCAAGTTCTCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS TCA 90 bp CCTGGGCCCCGCGAAATCCGCCGGACCGCAGAGCTCAAGAGCAAGTaGAGCTCCGAACCCAGGGAAGGCGGAGACCACTTGACGTTTGCA +
Preference number: 5 (lower is better)
Translates to: PGPREIRRTAELKSK*SSEPREGGDHLTFA
Trigger: TGCAAACGTCAAGTGGTCTCCGCCTTCCCTGGGTTCGGAGCTTCACTTGCTCTTGAGCTCTGCGGTCCGGCGGATTTCGCGGGGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS CCA 90 bp GTTCCATGGCAGACTGAAGTGTCACTCATACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGAGAGAACTTGCACCCGGGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: VPWQTEVSLIQRAWE*ALRATGENLHPGCA
Trigger: CGCGCAGCCCGGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTGCCATGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000418762.5
CDS CCA 90 bp GGCCAGGTTCCATGGCAGACTGAAGTGTCACTCATACAGAGGGCCTaGGAGTGGGCACTCAGGGCAACAGGAGAGAACTTGCACCCGGGC +
Preference number: 5 (lower is better)
Translates to: GQVPWQTEVSLIQRA*EWALRATGENLHPG
Trigger: GCCCGGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTGCCATGGAACCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000418762.5
CDS-3UTR CAA 90 bp AAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATAAGCGCAACAGGAGAGAACTaGCACCCGGGCTGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: KCRPCGLHARSLCSQWISATGEN*HPGCAR
Trigger: CCGCGCGCAGCCCGGGTGCAAGTTCTCTCCTGTTGC...GCTTATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418762.5
CDS CCA 90 bp GTTCCATGGCAGACTGAAGTGTCACTCATACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGAGAGAACTTGCACCTTCCTGTGCGC +
Preference number: 5 (lower is better)
Translates to: VPWQTEVSLIQRAWE*ALRATGENLHLPVR
Trigger: GCGCACAGGAAGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTGCCATGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS CCA 90 bp GGCCAGGTTCCATGGCAGACTGAAGTGTCACTCATACAGAGGGCCTaGGAGTGGGCACTCAGGGCAACAGGAGAGAACTTGCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: GQVPWQTEVSLIQRA*EWALRATGENLHLP
Trigger: AGGAAGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTGCCATGGAACCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS CCA 90 bp GGCCAGGTTCCATGGCAGACTGAAGTGTCACTCATACAGAGGGCCTaGGAGTGGGCACTCAGGGCAACAGGAGAGAACTTGCACCTGCAA +
Preference number: 5 (lower is better)
Translates to: GQVPWQTEVSLIQRA*EWALRATGENLHLQ
Trigger: TTGCAGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTGCCATGGAACCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414420.5
CDS GCA 90 bp TACAGAGGGCCTGGGAGTGGGCACTCAGGGCAACAGGAGAGAACTTaGACAGTTCTAGACGGTGGGAATTCCAAGATCAGGGCACCAGCA +
Preference number: 5 (lower is better)
Translates to: YRGPGSGHSGQQERT*TVLDGGNSKIRAPA
Trigger: TGCTGGTGCCCTGATCTTGGAATTCCCACCGTCTAGAACTGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS CCA 90 bp GGCCAGGTTCCATGGCAGACTGAAGTGTCACTCATACAGAGGGCCTaGGAGTGGGCACTCAGGGCAACAGGAGAGAACTTGCACAGTTCT +
Preference number: 5 (lower is better)
Translates to: GQVPWQTEVSLIQRA*EWALRATGENLHSS
Trigger: AGAACTGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTGCCATGGAACCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CAA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCGGTAAGTGGCAATGCTaGGCTGTGATGACCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPGKWQC*AVMTSK
Trigger: CTTGGAGGTCATCACAGCCAAGCATTGCCACTTACC...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CTGCAAGCACTCCCTGGGTGGTGGTTGAATCTGCACCACTGTGGACCTGATCCCGGGCTCTGGACACAATaGACTCAGGTGGAATCTAGG +
Preference number: 5 (lower is better)
Translates to: LQALPGWWLNLHHCGPDPGLWTQ*TQVESR
Trigger: CCTAGATTCCACCTGAGTCAATTGTGTCCAGAGCCC...GGGATCAGGTCCACAGTGGTGCAGATTCAACCACCACCCAGGGAGTGCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS CCA 90 bp GTTCCATGGCAGACTGAAGTGTCACTCATACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGAGAGAACTTGCACAGTTCTAGACGG +
Preference number: 5 (lower is better)
Translates to: VPWQTEVSLIQRAWE*ALRATGENLHSSRR
Trigger: CCGTCTAGAACTGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTGCCATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS CCA 90 bp GTTCCATGGCAGACTGAAGTGTCACTCATACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGAGAGAACTTGCACCTGCAACTTAGG +
Preference number: 5 (lower is better)
Translates to: VPWQTEVSLIQRAWE*ALRATGENLHLQLR
Trigger: CCTAAGTTGCAGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTGCCATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414420.5
CDS-3UTR CAA 90 bp TGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCAAGAAGTGCAGACCTaGTGGCCTTCATGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: CQANDSCRSVDHRDPHGSQEVQT*WPSCSE
Trigger: CTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG...CGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS TCA 90 bp CGGTGGGAATTCCAAGATCAGGGCACCAGCAGATTCCGTGTCTGGTaGGGGCTGTTCTCTGCTTCCAAAATAGTGCCTTGTTGCTCACCC +
Preference number: 5 (lower is better)
Translates to: RWEFQDQGTSRFRVW*GLFSASKIVPCCSP
Trigger: GGGTGAGCAACAAGGCACTATTTTGGAAGCAGAGAACAGCCCTCACCAGACACGGAATCTGCTGGTGCCCTGATCTTGGAATTCCCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS GCA 90 bp TACAGAGGGCCTGGGAGTGGGCACTCAGGGCAACAGGAGAGAACTTaGACCTGCAACTTAGGATTAGGTTTACAGCCTCTGTGCTCACAC +
Preference number: 5 (lower is better)
Translates to: YRGPGSGHSGQQERT*TCNLGLGLQPLCSH
Trigger: GTGTGAGCACAGAGGCTGTAAACCTAATCCTAAGTTGCAGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414420.5
CDS-3UTR CAA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATGGTAAGTGGCAATGCTaGGCTGTGATGACCTCCAAG +
Preference number: 5 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDGKWQC*AVMTSK
Trigger: CTTGGAGGTCATCACAGCCAAGCATTGCCACTTACC...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CAA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGCTCTTCCTTGGCTCCTaGAGGCTGGGGATAGTGAGC +
Preference number: 5 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMLFLGS*RLGIVS
Trigger: GCTCACTATCCCCAGCCTCAAGGAGCCAAGGAAGAG...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGCTCTTCCTTGGCTCCTaGAGGCTGGGGATAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SVDHRDPHGSLLTHGATELFLGS*RLGIVS
Trigger: GCTCACTATCCCCAGCCTCAAGGAGCCAAGGAAGAG...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGCAAGAAGTGCAGACCTaGTGGCCTTCATGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWQEVQT*WPSCSE
Trigger: CTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp GACACATGCAGCAACATCTATGCAGAGTCTGCAAGCACTCCCTGGGTGGTGGTTGGTAAGTGGCAATGCTaGGCTGTGATGACCTCCAAG +
Preference number: 5 (lower is better)
Translates to: DTCSNIYAESASTPWVVVGKWQC*AVMTSK
Trigger: CTTGGAGGTCATCACAGCCAAGCATTGCCACTTACC...AACCACCACCCAGGGAGTGCTTGCAGACTCTGCATAGATGTTGCTGCATGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp ATTGAACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGACTCAGTCAGCAACAGGAGAGAACTaGCACCCGGGCTGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: IEQMAGIVGITTLPGTQSATGEN*HPGCAR
Trigger: CCGCGCGCAGCCCGGGTGCAAGTTCTCTCCTGTTGC...TGACTGAGTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR CAA 90 bp CTGGTCTGGTTCTCCTTGATGGAGGCTCCAAACTGTCTCCTCATTGCCTCGTATGGTAAGTGGCAATGCTaGGCTGTGATGACCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LVWFSLMEAPNCLLIASYGKWQC*AVMTSK
Trigger: CTTGGAGGTCATCACAGCCAAGCATTGCCACTTACC...ATACGAGGCAATGAGGAGACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CAA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCGCTAAGCCCAGTGCCTaGTACATAACCTGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPAKPSA*YITWVH
Trigger: ATGCACCCAGGTTATGTACAAGGCACTGGGCTTAGC...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR CAA 90 bp CTTTCAAGAGAATTAAACACTGCCATTCTGACAGGCACATGGGACACATGCAGCGCAACAGGAGAGAACTaGCACCTTCCTGTGCGCGAC +
Preference number: 5 (lower is better)
Translates to: LSRELNTAILTGTWDTCSATGEN*HLPVRD
Trigger: GTCGCGCACAGGAAGGTGCAAGTTCTCTCCTGTTGC...GCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS-3UTR CAA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGCAAGAAGTGCAGACCTaGTGGCCTTCATGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLQEVQT*WPSCSE
Trigger: CTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACGGTAAGTGGCAATGCTaGGCTGTGATGACCTCCAAG +
Preference number: 5 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDGKWQC*AVMTSK
Trigger: CTTGGAGGTCATCACAGCCAAGCATTGCCACTTACC...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAGTCTCCTTGTTAGTCTaGCAATCACCTCACTGGTCT +
Preference number: 5 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLVSLLV*QSPHWS
Trigger: AGACCAGTGAGGTGATTGCAAGACTAACAAGGAGAC...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CTTTCAAGAGAATTAAACACTGCCATTCTGACAGGCACATGGGACACATGCAGCCCAGCCAGGGAGGCTTaGGTGTGGTCACTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LSRELNTAILTGTWDTCSPAREA*VWSLSC
Trigger: ACAAGAAAGTGACCACACCAAAGCCTCCCTGGCTGG...GCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CAAGAAGTGCAGACCTTGTGGCCTTCATGCTCGGAGTCTCTGCAGCCAGTGGATTCTTCTTTCTCTTGCTaGAGATTGCTCAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: QEVQTLWPSCSESLQPVDSSFSC*RLLKEV
Trigger: AACCTCCTTGAGCAATCTCAAGCAAGAGAAAGAAGA...ATCCACTGGCTGCAGAGACTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392854.4
CDS-3UTR CAA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTACAAAATAGTGCCTTGTaGCTCACCCTGCAACTTAGG +
Preference number: 5 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLQNSAL*LTLQLR
Trigger: CCTAAGTTGCAGGGTGAGCAACAAGGCACTATTTTG...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CAA 90 bp AGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTCAAGAAGTGCAGACCTaGTGGCCTTCATGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: SVVSHMCNYCQANDSCRSQEVQT*WPSCSE
Trigger: CTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG...AGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGTTTATGGTATGGAACTaGGGCTGTACTGACAGAAGG +
Preference number: 5 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEFMVWN*GCTDRR
Trigger: CCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAA...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp CTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGTTTATGGTATGGAACTaGGGCTGTACTGACAGAAGG +
Preference number: 5 (lower is better)
Translates to: LMQVCGPSRSPWIAINTWFMVWN*GCTDRR
Trigger: CCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAA...CCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGGGGCTCTGGACACAATaGACTCAGGTGGAATCTAGG +
Preference number: 5 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLGLWTQ*TQVESR
Trigger: CCTAGATTCCACCTGAGTCAATTGTGTCCAGAGCCC...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATCCAGCCAGGGAGGCTTaGGTGTGGTCACTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHPAREA*VWSLSC
Trigger: ACAAGAAAGTGACCACACCAAAGCCTCCCTGGCTGG...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTCTCCCTGGGTGGTGGTaGAATCTGCACCACTGTGGA +
Preference number: 5 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESLPGWW*NLHHCG
Trigger: TCCACAGTGGTGCAGATTCAACCACCACCCAGGGAG...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTAAGCCTCTTCTTTCTCTaGCTTGAGATTGCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLSLFFL*LEIAQG
Trigger: TCCTTGAGCAATCTCAAGCAAGAGAAAGAAGAGGCT...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CAA 90 bp TCTGTGGACCATCGAGATCCCCATGGATCGCTATTAACACATGGAGCCACTGAGCAAACTGTCTCCTCATaGCCTCGTATATACCTTGAG +
Preference number: 5 (lower is better)
Translates to: SVDHRDPHGSLLTHGATEQTVSS*PRIYLE
Trigger: CTCAAGGTATATACGAGGCAATGAGGAGACAGTTTG...CTCAGTGGCTCCATGTGTTAATAGCGATCCATGGGGATCTCGATGGTCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CAA 90 bp ACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGAGTGGGACACAGCGTTaGGTGACTGAGATACTGTTT +
Preference number: 5 (lower is better)
Translates to: TCVITVRPMTHAGLWTIESGTQR*VTEILF
Trigger: AAACAGTATCTCAGTCACCAAACGCTGTGTCCCACT...CTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTCAAGAAGTGCAGACCTaGTGGCCTTCATGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESQEVQT*WPSCSE
Trigger: CTCCGAGCATGAAGGCCACAAGGTCTGCACTTCTTG...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCAGTGGCTCCATTAAGTaGAGGAAAATCCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTSGSIK*RKILLQ
Trigger: CTGGAGGAGGATTTTCCTCAACTTAATGGAGCCACT...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CTATCTCCTCTTTTAGCAAGAGGGATGAATGAGGAAGCCAAACCCCTACTCCCCAATCACATGCAGTACTaGGAAGATGTCAGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LSPLLARGMNEEAKPLLPNHMQY*EDVSGV
Trigger: CACTCCACTGACATCTTCCAAGTACTGCATGTGATT...GGGGAGTAGGGGTTTGGCTTCCTCATTCATCCCTCTTGCTAAAAGAGGAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp ATTGAACAAATGGCTGGAATTGTTGGAATTACTACTCTTCCAGGGACTCAGTCACTCCCTGGGTGGTGGTaGAATCTGCACCACTGTGGA +
Preference number: 5 (lower is better)
Translates to: IEQMAGIVGITTLPGTQSLPGWW*NLHHCG
Trigger: TCCACAGTGGTGCAGATTCAACCACCACCCAGGGAG...TGACTGAGTCCCTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTTGTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGCCTGTATGAATCATTaGGCATGGGTGAATTGTCTT +
Preference number: 5 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMACMNH*AWVNCL
Trigger: AAGACAATTCACCCATGCCAAATGATTCATACAGGC...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR CAA 90 bp GCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGGATCGCTATTATTCTCTTGCTTGAGATaGCTCAAGGAGGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: ANDSCRSVDHRDPHGSLLFSCLR*LKEVVL
Trigger: AAGAACAACCTCCTTGAGCAATCTCAAGCAAGAGAA...TAATAGCGATCCATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CAA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGTCTTCTTTCTCTTGCTaGAGATTGCTCAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMSSFSC*RLLKEV
Trigger: AACCTCCTTGAGCAATCTCAAGCAAGAGAAAGAAGA...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CAA 90 bp GTCGTGGCAAATGTGGCATCAGTTTCATTTCGGGGCAGTGGCAAGTTACAGATACAAAATAGTGCCTTGTaGCTCACCCTGCAACTTAGG +
Preference number: 5 (lower is better)
Translates to: VVANVASVSFRGSGKLQIQNSAL*LTLQLR
Trigger: CCTAAGTTGCAGGGTGAGCAACAAGGCACTATTTTG...TATCTGTAACTTGCCACTGCCCCGAAATGAAACTGATGCCACATTTGCCACGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392854.4
CDS-3UTR CAA 90 bp ATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCATCGAGATCCCCATGTGCCTCGTATATACCTaGAGACATAGTACCACAACT +
Preference number: 5 (lower is better)
Translates to: ITVRPMTHAGLWTIEIPMCLVYT*RHSTTT
Trigger: AGTTGTGGTACTATGTCTCAAGGTATATACGAGGCA...CATGGGGATCTCGATGGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CAA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACCTGGTCTGGTTCTCCTaGATGGAGGCTCCAAACTGT +
Preference number: 5 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDLVWFS*MEAPNC
Trigger: ACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAG...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CAA 90 bp TTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGGCATTTACAGAGTGGTaGGTCTTTCATGCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: LCLTCVITVRPMTHAGLWAFTEW*VFHALH
Trigger: GTGCAGGGCATGAAAGACCAACCACTCTGTAAATGC...CCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651933.1
CDS GCA 90 bp AGGGCAGTAGATGTCTGGAGCCCATCGGTTGCACTCATAATTGTCTaGTGCCTTTTCACAGGTGAAACATTTAAATCCACCAGGATATGG +
Preference number: 5 (lower is better)
Translates to: RAVDVWSPSVALIIV*CLFTGETFKSTRIW
Trigger: CCATATCCTGGTGGATTTAAATGTTTCACCTGTGAAAAGGCAGCAGACAATTATGAGTGCAACCGATGGGCTCCAGACATCTACTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTCAACTCCATCCTGGTTaGGGGCTCTGGACACAATTG +
Preference number: 5 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESQLHPG*GLWTQL
Trigger: CAATTGTGTCCAGAGCCCCAAACCAGGATGGAGTTG...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACAACAGCTTCACAACATaGCGTTTGAGCTTTGGTACC +
Preference number: 5 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDNSFTT*RLSFGT
Trigger: GGTACCAAAGCTCAAACGCAATGTTGTGAAGCTGTT...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCCTGGTCTGGTTCTCCTaGATGGAGGCTCCAAACTGT +
Preference number: 5 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCLVWFS*MEAPNC
Trigger: ACAGTTTGGAGCCTCCATCAAGGAGAACCAGACCAG...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS GCA 90 bp GCAGTAGATGTCTGGAGCCCATCGGTTGCACTCATAATTGTCTGCTaGCTTTTCACAGGTGAAACATTTAAATCCACCAGGATATGGTGT +
Preference number: 5 (lower is better)
Translates to: AVDVWSPSVALIIVC*LFTGETFKSTRIWC
Trigger: ACACCATATCCTGGTGGATTTAAATGTTTCACCTGTGAAAAGGCAGCAGACAATTATGAGTGCAACCGATGGGCTCCAGACATCTACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGAGCCTCTTCTTTCTCTaGCTTGAGATTGCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLSLFFL*LEIAQG
Trigger: TCCTTGAGCAATCTCAAGCAAGAGAAAGAAGAGGCT...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS TCA 90 bp TCCCATTGTTTTGCTGGAGCTCGGAAGCCTCTTCTTTCTCTTGCTTaGGATTGCTCAAGGAGGTTGTTCTTTATGTGCATTTACAGAGTG +
Preference number: 5 (lower is better)
Translates to: SHCFAGARKPLLSLA*DCSRRLFFMCIYRV
Trigger: CACTCTGTAAATGCACATAAAGAACAACCTCCTTGAGCAATCTCAAGCAAGAGAAAGAAGAGGCTTCCGAGCTCCAGCAAAACAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392854.4
ENST00000414420.5
ENST00000651933.1
CDS-3UTR CAA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTAAGTGGGACACAGCGTTaGGTGACTGAGATACTGTTT +
Preference number: 5 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLSGTQR*VTEILF
Trigger: AAACAGTATCTCAGTCACCAAACGCTGTGTCCCACT...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp ATGACCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTTTATGGTATGGAACTaGGGCTGTACTGACAGAAGG +
Preference number: 5 (lower is better)
Translates to: MTSKSVVSHMCNYCQANDFMVWN*GCTDRR
Trigger: CCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAA...GTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCACAACTCCATCCTGGTTaGGGGCTCTGGACACAATTG +
Preference number: 5 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSQLHPG*GLWTQL
Trigger: CAATTGTGTCCAGAGCCCCAAACCAGGATGGAGTTG...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp GCCAGGGAGGCTTTGGTGTGGTCACTTTCTTGTTTCTTATTCAATCACATGCAGAACAAAGACATGCTCTaGGGAAGCTGTAGACCTTAT +
Preference number: 5 (lower is better)
Translates to: AREALVWSLSCFLFNHMQNKDML*GSCRPY
Trigger: ATAAGGTCTACAGCTTCCCAAGAGCATGTCTTTGTT...CTGCATGTGATTGAATAAGAAACAAGAAAGTGACCACACCAAAGCCTCCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS-3UTR CAA 90 bp TGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACCGATTGCTCAAGGAGGTaGTTCTTTATGTGCATTTAC +
Preference number: 5 (lower is better)
Translates to: CLTCVITVRPMTHAGLWTDCSRR*FFMCIY
Trigger: GTAAATGCACATAAAGAACAACCTCCTTGAGCAATC...GGTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CAA 90 bp GTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGGACGATTGCTCAAGGAGGTaGTTCTTTATGTGCATTTAC +
Preference number: 5 (lower is better)
Translates to: VSHMCNYCQANDSCRSVDDCSRR*FFMCIY
Trigger: GTAAATGCACATAAAGAACAACCTCCTTGAGCAATC...GTCCACAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CAA 90 bp GTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATGCAGGTCTGTGCCTCGTATATACCTaGAGACATAGTACCACAACT +
Preference number: 5 (lower is better)
Translates to: VLCLTCVITVRPMTHAGLCLVYT*RHSTTT
Trigger: AGTTGTGGTACTATGTCTCAAGGTATATACGAGGCA...CAGACCTGCATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CAA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTTTTATGGTATGGAACTaGGGCTGTACTGACAGAAGG +
Preference number: 5 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESFMVWN*GCTDRR
Trigger: CCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAA...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS-3UTR CAA 90 bp AAGTTACAGATATTTCCTTCACAACAAGAAGTGCAGACCTTGTGGCCTTCATGCCAAACTGTCTCCTCATaGCCTCGTATATACCTTGAG +
Preference number: 5 (lower is better)
Translates to: KLQIFPSQQEVQTLWPSCQTVSS*PRIYLE
Trigger: CTCAAGGTATATACGAGGCAATGAGGAGACAGTTTG...GCATGAAGGCCACAAGGTCTGCACTTCTTGTTGTGAAGGAAATATCTGTAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS GCA 90 bp TTTTTCCCATTGTTTTGCTGGAGCTCGGAAGCCTCTTCTTTCTCTTaGTTGAGATTGCTCAAGGAGGTTGTTCTTTATGTGCATTTACAG +
Preference number: 5 (lower is better)
Translates to: FFPLFCWSSEASSFS*LRLLKEVVLYVHLQ
Trigger: CTGTAAATGCACATAAAGAACAACCTCCTTGAGCAATCTCAAGCAAGAGAAAGAAGAGGCTTCCGAGCTCCAGCAAAACAATGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392854.4
ENST00000414420.5
ENST00000651933.1
CDS-3UTR CAA 90 bp AATTACTACTCTTCCAGGGACTCAGTCAGAATTTCCAAGGAAATAGTCCATTCAAGTGGGACACAGCGTTaGGTGACTGAGATACTGTTT +
Preference number: 5 (lower is better)
Translates to: NYYSSRDSVRISKEIVHSSGTQR*VTEILF
Trigger: AAACAGTATCTCAGTCACCAAACGCTGTGTCCCACT...TGAATGGACTATTTCCTTGGAAATTCTGACTGAGTCCCTGGAAGAGTAGTAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CTTTCAAGAGAATTAAACACTGCCATTCTGACAGGCACATGGGACACATGCAGCACCATGGAAAAATCCTaGAGACAAACATATTGCTCT +
Preference number: 5 (lower is better)
Translates to: LSRELNTAILTGTWDTCSTMEKS*RQTYCS
Trigger: AGAGCAATATGTTTGTCTCAAGGATTTTTCCATGGT...GCTGCATGTGTCCCATGTGCCTGTCAGAATGGCAGTGTTTAATTCTCTTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTAACAGCTTCACAACATaGCGTTTGAGCTTTGGTACC +
Preference number: 5 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTNSFTT*RLSFGT
Trigger: GGTACCAAAGCTCAAACGCAATGTTGTGAAGCTGTT...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CATGCAGTACTTGGAAGATGTCAGTGGAGTGTAATCATGCACAAAAATGGTACTAATCACATGCAGTACTaGGAAGATGTCAGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: HAVLGRCQWSVIMHKNGTNHMQY*EDVSGV
Trigger: CACTCCACTGACATCTTCCAAGTACTGCATGTGATT...AGTACCATTTTTGTGCATGATTACACTCCACTGACATCTTCCAAGTACTGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTTTCTCTTGCTTGAGATaGCTCAAGGAGGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESFSCLR*LKEVVL
Trigger: AAGAACAACCTCCTTGAGCAATCTCAAGCAAGAGAA...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS-3UTR CAA 90 bp AGACATTTTTCTATGGAGGGCAGATGGACCCTGACAACACTGTCCTCTTTATTAAAATGGCTGGAATTGTaGGAATTACTACTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RHFSMEGRWTLTTLSSLLKWLEL*ELLLFQ
Trigger: CTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTT...TAATAAAGAGGACAGTGTTGTCAGGGTCCATCTGCCCTCCATAGAAAAATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCGTCTCCTTGTTAGTCTaGCAATCACCTCACTGGTCT +
Preference number: 5 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTVSLLV*QSPHWS
Trigger: AGACCAGTGAGGTGATTGCAAGACTAACAAGGAGAC...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp CCTCCAAGAGTGTTGTGTCTCACATGTGTAATTACTGTCAGGCCAATGACTCATATAGTACCACAACTTTaGACCATGCACGATGAAAAA +
Preference number: 5 (lower is better)
Translates to: PPRVLCLTCVITVRPMTHIVPQL*TMHDEK
Trigger: TTTTTCATCGTGCATGGTCAAAAGTTGTGGTACTAT...ATGAGTCATTGGCCTGACAGTAATTACACATGTGAGACACAACACTCTTGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CAA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAAAGTGGCTCCATTAAGTaGAGGAAAATCCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKSGSIK*RKILLQ
Trigger: CTGGAGGAGGATTTTCCTCAACTTAATGGAGCCACT...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCATCGCATATTATGCCTaGCTTCCCCATCATTCGAAA +
Preference number: 5 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGIAYYA*LPHHSK
Trigger: TTTCGAATGATGGGGAAGCAAGGCATAATATGCGAT...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp AAACGTTTATGGTATGGAACTTGGGCTGTACTGACAGAAGGCTTTGATGAGTCTATAGTACCACAACTTTaGACCATGCACGATGAAAAA +
Preference number: 5 (lower is better)
Translates to: KRLWYGTWAVLTEGFDESIVPQL*TMHDEK
Trigger: TTTTTCATCGTGCATGGTCAAAAGTTGTGGTACTAT...AGACTCATCAAAGCCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAACGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS-3UTR CAA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAATTTATGGTATGGAACTaGGGCTGTACTGACAGAAGG +
Preference number: 5 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKFMVWN*GCTDRR
Trigger: CCTTCTGTCAGTACAGCCCAAGTTCCATACCATAAA...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp ATATTGAGATGTAATGGAGAATTTAATGTGGTAGAAAAGTCAGAGTGGCTGACCAAATGGCTGGAATTGTaGGAATTACTACTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ILRCNGEFNVVEKSEWLTKWLEL*ELLLFQ
Trigger: CTGGAAGAGTAGTAATTCCAACAATTCCAGCCATTT...GGTCAGCCACTCTGACTTTTCTACCACATTAAATTCTCCATTACATCTCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAAATCGCATATTATGCCTaGCTTCCCCATCATTCGAAA +
Preference number: 5 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKIAYYA*LPHHSK
Trigger: TTTCGAATGATGGGGAAGCAAGGCATAATATGCGAT...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp GTTAGACTCAAAATGGCTACAATGAAGCAACATTTATTCCTCATGGTAAGTGGCGGTGTGGTCACTTTCTaGTTTCTTATTCAATCACAT +
Preference number: 5 (lower is better)
Translates to: VRLKMATMKQHLFLMVSGGVVTF*FLIQSH
Trigger: ATGTGATTGAATAAGAAACAAGAAAGTGACCACACC...GCCACTTACCATGAGGAATAAATGTTGCTTCATTGTAGCCATTTTGAGTCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp GCATATTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTAAGAAAAACTTCCCATaGAGTCTCCTTGTTAGTCTT +
Preference number: 5 (lower is better)
Translates to: AYYALLPHHSKDNLMQNLKKNFP*SLLVSL
Trigger: AAGACTAACAAGGAGACTCAATGGGAAGTTTTTCTT...AAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp GCATATTATGCCTTGCTTCCCCATCATTCGAAAGACAATTTAATGCAGAATCTTACCATGGAAAAATCCTaGAGACAAACATATTGCTCT +
Preference number: 5 (lower is better)
Translates to: AYYALLPHHSKDNLMQNLTMEKS*RQTYCS
Trigger: AGAGCAATATGTTTGTCTCAAGGATTTTTCCATGGT...AAGATTCTGCATTAAATTGTCTTTCGAATGATGGGGAAGCAAGGCATAATATGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS-3UTR CAA 90 bp TTAAGAACCCCAGATCTCGATAAATGCAGAACTACTTCTTGGAATGAAAACAAAGGTGTGGTCACTTTCTaGTTTCTTATTCAATCACAT +
Preference number: 5 (lower is better)
Translates to: LRTPDLDKCRTTSWNENKGVVTF*FLIQSH
Trigger: ATGTGATTGAATAAGAAACAAGAAAGTGACCACACC...TTTGTTTTCATTCCAAGAAGTAGTTCTGCATTTATCGAGATCTGGGGTTCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000409381.5
CDS GCA 72 bp GCTGCGCGCGGATTCCGGCCGCCAGCTGCAGCCCGCTaGCCCATCCCACGAACACTGCGGCGCCCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: AARGFRPPAAAR*PIPRTLRRPQS
Trigger: ACTCTGGGGGCGCCGCAGTGTTCGTGGGATGGGGCAGCGGGCTGCAGCTGGCGGCCGGAATCCGCGCGCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS GCA 72 bp TTGCACCCGGGCTGCGCGCGGATTCCGGCCGCCAGCTaGAGCCCGCTGCCCCATCCCACGAACACTGCGGCG +
Preference number: 6 (lower is better)
Translates to: LHPGCARIPAAS*SPLPHPTNTAA
Trigger: CGCCGCAGTGTTCGTGGGATGGGGCAGCGGGCTGCAGCTGGCGGCCGGAATCCGCGCGCAGCCCGGGTGCAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334166.9
CDS CCA 72 bp CAGGAGAGAACTTGCACCTTCCTGTGCGCGACCCCCTaGCGCCTCTCCCTAGCCGCCAGCCTCAGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: QERTCTFLCATP*RLSLAASLSRA
Trigger: GGCCCGGCTGAGGCTGGCGGCTAGGGAGAGGCGCCAGGGGGTCGCGCACAGGAAGGTGCAAGTTCTCTCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS TCA 72 bp AGCTGCGTGCGTGGCTGCAGGCCCGGCAGTGTGAAATaGCCCTGGCCAAATCTCACTCCCCGCCATCCCCTG +
Preference number: 6 (lower is better)
Translates to: SCVRGCRPGSVK*PWPNLTPRHPL
Trigger: CAGGGGATGGCGGGGAGTGAGATTTGGCCAGGGTCATTTCACACTGCCGGGCCTGCAGCCACGCACGCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS TCA 72 bp CCAGCAGCTGCGTGCGTGGCTGCAGGCCCGGCAGTGTaGAATGACCCTGGCCAAATCTCACTCCCCGCCATC +
Preference number: 6 (lower is better)
Translates to: PAAACVAAGPAV*NDPGQISLPAI
Trigger: GATGGCGGGGAGTGAGATTTGGCCAGGGTCATTTCACACTGCCGGGCCTGCAGCCACGCACGCAGCTGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS TCA 72 bp CGCGAAATCCGCCGGACCGCAGAGCTCAAGAGCAAGTaGAGCTCCGAACCCAGGGAAGGCGGAGACCACTTG +
Preference number: 6 (lower is better)
Translates to: REIRRTAELKSK*SSEPREGGDHL
Trigger: CAAGTGGTCTCCGCCTTCCCTGGGTTCGGAGCTTCACTTGCTCTTGAGCTCTGCGGTCCGGCGGATTTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS CCA 72 bp CAGACTGAAGTGTCACTCATACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGAGAGAACTTGCACCCG +
Preference number: 6 (lower is better)
Translates to: QTEVSLIQRAWE*ALRATGENLHP
Trigger: CGGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334166.9
ENST00000418762.5
CDS CAA 90 bp ATACAGAGGGCCTGGGAGTGGGCACTCAGGGCAACAGGAGAGAACTaGCACAGTTCTAGACGGTGGGAATTCCAAGATCAGGGCACCAGC +
Preference number: 6 (lower is better)
Translates to: IQRAWEWALRATGEN*HSSRRWEFQDQGTS
Trigger: GCTGGTGCCCTGATCTTGGAATTCCCACCGTCTAGAACTGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS CCA 72 bp CAGACTGAAGTGTCACTCATACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGAGAGAACTTGCACCTG +
Preference number: 6 (lower is better)
Translates to: QTEVSLIQRAWE*ALRATGENLHL
Trigger: CAGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414420.5
CDS CCA 72 bp CAGACTGAAGTGTCACTCATACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGAGAGAACTTGCACAGT +
Preference number: 6 (lower is better)
Translates to: QTEVSLIQRAWE*ALRATGENLHS
Trigger: ACTGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS CCA 72 bp CAGACTGAAGTGTCACTCATACAGAGGGCCTGGGAGTaGGCACTCAGGGCAACAGGAGAGAACTTGCACCTT +
Preference number: 6 (lower is better)
Translates to: QTEVSLIQRAWE*ALRATGENLHL
Trigger: AAGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTATGAGTGACACTTCAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409381.5
CDS CAA 90 bp ATACAGAGGGCCTGGGAGTGGGCACTCAGGGCAACAGGAGAGAACTaGCACCTGCAACTTAGGATTAGGTTTACAGCCTCTGTGCTCACA +
Preference number: 6 (lower is better)
Translates to: IQRAWEWALRATGEN*HLQLRIRFTASVLT
Trigger: TGTGAGCACAGAGGCTGTAAACCTAATCCTAAGTTGCAGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACTCCCAGGCCCTCTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414420.5
CDS GCA 72 bp CACCAGCAGATTCCGTGTCTGGTGAGGGCTGTTCTCTaGTTCCAAAATAGTGCCTTGTTGCTCACCCTGCAA +
Preference number: 6 (lower is better)
Translates to: HQQIPCLVRAVL*FQNSALLLTLQ
Trigger: TTGCAGGGTGAGCAACAAGGCACTATTTTGGAAGCAGAGAACAGCCCTCACCAGACACGGAATCTGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS CCA 72 bp GTAGCAGTATCTGGTCTCTCGAGGGCAGTAGATGTCTaGAGCCCATCGGTTGCACTCATAATTGTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VAVSGLSRAVDV*SPSVALIIVCC
Trigger: GCAGCAGACAATTATGAGTGCAACCGATGGGCTCCAGACATCTACTGCCCTCGAGAGACCAGATACTGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334166.9
ENST00000409381.5
ENST00000651933.1
CDS CCA 72 bp AGGGCAACAGGAGAGAACTTGCACAGTTCTAGACGGTaGGAATTCCAAGATCAGGGCACCAGCAGATTCCGT +
Preference number: 6 (lower is better)
Translates to: RATGENLHSSRR*EFQDQGTSRFR
Trigger: ACGGAATCTGCTGGTGCCCTGATCTTGGAATTCCCACCGTCTAGAACTGTGCAAGTTCTCTCCTGTTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS GCA 72 bp AGTGGGCACTCAGGGCAACAGGAGAGAACTTGCACCTaGAACTTAGGATTAGGTTTACAGCCTCTGTGCTCA +
Preference number: 6 (lower is better)
Translates to: SGHSGQQERTCT*NLGLGLQPLCS
Trigger: TGAGCACAGAGGCTGTAAACCTAATCCTAAGTTGCAGGTGCAAGTTCTCTCCTGTTGCCCTGAGTGCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414420.5
CDS CCA 72 bp CTTCTAGATCATGGTTCCTCGAGGGCAGTAGATGTCTaGAGCCCATCGGTTGCACTCATAATTGTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LLDHGSSRAVDV*SPSVALIIVCC
Trigger: GCAGCAGACAATTATGAGTGCAACCGATGGGCTCCAGACATCTACTGCCCTCGAGGAACCATGATCTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000418762.5
CDS CAA 90 bp ATTCCGTGTCTGGTGAGGGCTGTTCTCTGCTTCCAAAATAGTGCCTaGTTGCTCACCCTGCAACTTAGGATTAGGTTTACAGCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: IPCLVRAVLCFQNSA*LLTLQLRIRFTASV
Trigger: CACAGAGGCTGTAAACCTAATCCTAAGTTGCAGGGTGAGCAACAAGGCACTATTTTGGAAGCAGAGAACAGCCCTCACCAGACACGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS CAA 72 bp GTGAGGGCTGTTCTCTGCTTCCAAAATAGTGCCTTGTaGCTCACCCTGCAACTTAGGATTAGGTTTACAGCC +
Preference number: 6 (lower is better)
Translates to: VRAVLCFQNSAL*LTLQLRIRFTA
Trigger: GGCTGTAAACCTAATCCTAAGTTGCAGGGTGAGCAACAAGGCACTATTTTGGAAGCAGAGAACAGCCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS CAA 72 bp CTGGTGAGGGCTGTTCTCTGCTTCCAAAATAGTGCCTaGTTGCTCACCCTGCAACTTAGGATTAGGTTTACA +
Preference number: 6 (lower is better)
Translates to: LVRAVLCFQNSA*LLTLQLRIRFT
Trigger: TGTAAACCTAATCCTAAGTTGCAGGGTGAGCAACAAGGCACTATTTTGGAAGCAGAGAACAGCCCTCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS GCA 72 bp GATGTCTGGAGCCCATCGGTTGCACTCATAATTGTCTaGTGCCTTTTCACAGGTGAAACATTTAAATCCACC +
Preference number: 6 (lower is better)
Translates to: DVWSPSVALIIV*CLFTGETFKST
Trigger: GGTGGATTTAAATGTTTCACCTGTGAAAAGGCAGCAGACAATTATGAGTGCAACCGATGGGCTCCAGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334166.9
ENST00000392854.4
ENST00000409381.5
ENST00000418762.5
ENST00000651933.1
CDS CAA 90 bp TTGTTTTGCTGGAGCTCGGAAGCCTCTTCTTTCTCTTGCTTGAGATaGCTCAAGGAGGTTGTTCTTTATGTGCATTTACAGAGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: LFCWSSEASSFSCLR*LKEVVLYVHLQSGW
Trigger: CCAACCACTCTGTAAATGCACATAAAGAACAACCTCCTTGAGCAATCTCAAGCAAGAGAAAGAAGAGGCTTCCGAGCTCCAGCAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392854.4
ENST00000414420.5
ENST00000651933.1
CDS CAA 90 bp TTCCCATTGTTTTGCTGGAGCTCGGAAGCCTCTTCTTTCTCTTGCTaGAGATTGCTCAAGGAGGTTGTTCTTTATGTGCATTTACAGAGT +
Preference number: 6 (lower is better)
Translates to: FPLFCWSSEASSFSC*RLLKEVVLYVHLQS
Trigger: ACTCTGTAAATGCACATAAAGAACAACCTCCTTGAGCAATCTCAAGCAAGAGAAAGAAGAGGCTTCCGAGCTCCAGCAAAACAATGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392854.4
ENST00000414420.5
ENST00000651933.1
CDS GCA 72 bp TCACCCTGCAACTTAGGATTAGGTTTACAGCCTCTGTaGTCACACAGTAGCTTTTGCATAACTTTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: SPCNLGLGLQPL*SHSSFCITFSQ
Trigger: CTGAGAAAAAGTTATGCAAAAGCTACTGTGTGAGCACAGAGGCTGTAAACCTAATCCTAAGTTGCAGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392854.4
ENST00000651933.1
CDS GCA 72 bp TGCACCTGCAACTTAGGATTAGGTTTACAGCCTCTGTaGTCACACAGTAGCTTTTGCATAACTTTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: CTCNLGLGLQPL*SHSSFCITFSQ
Trigger: CTGAGAAAAAGTTATGCAAAAGCTACTGTGTGAGCACAGAGGCTGTAAACCTAATCCTAAGTTGCAGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414420.5