RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYPD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000159871

Ensembl transcript IDs: ENST00000377950.8, ENST00000414615.6, ENST00000594013.5, ENST00000594049.5, ENST00000595666.1, ENST00000599397.1, ENST00000601224.1, ENST00000602179.1, ENST00000651184.1

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCGACAGGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTaGCTGGTGCCTGGCTGGTGCTCAGTGAGTAACAGCTGTGATCAG +
Preference number: 1 (lower is better)
Translates to: CDRLWRESTGSRVMG*LVPGWCSVSNSCDQ
Trigger: CTGATCACAGCTGTTACTCACTGAGCACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCCTGTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR CCA 90 bp GCTGGTGACTGTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTaGGGCACAAGGGCGGGAGAGATGGAAGGCCAGAGGGACAGGAGT +
Preference number: 1 (lower is better)
Translates to: AGDCVQFLPVLLARL*GTRAGEMEGQRDRS
Trigger: ACTCCTGTCCCTCTGGCCTTCCATCTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACACAGTCACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR GCA 90 bp GAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTaGTCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGG +
Preference number: 1 (lower is better)
Translates to: ESTGSRVMGCLVPGW*SVSNSCDQNCSSSG
Trigger: CCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGAGCACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR CCA 90 bp CTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGATTCGATaGCTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCT +
Preference number: 1 (lower is better)
Translates to: LWSLGSLQSMHQQIR*LVRTHFLAYRHLLA
Trigger: AGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAGCCATCGAATCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR TCA 90 bp GTCTGGGAAGTCTGCAATCAATGCACCAGCAGATTCGATGGCTGGTaGGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCT +
Preference number: 1 (lower is better)
Translates to: VWEVCNQCTSRFDGW*EPTFLLIGTCWLCS
Trigger: AGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAGCCATCGAATCTGCTGGTGCATTGATTGCAGACTTCCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR CCA 90 bp GTGTGTTTTTCTGTGAAGTTAATCGGCACTCATGTGTTTAGGAGGTaGGGTTGCTTAGCAGTTCGTGGGGCTGGGAATCTGGTCCCTGAA +
Preference number: 1 (lower is better)
Translates to: VCFSVKLIGTHVFRR*GCLAVRGAGNLVPE
Trigger: TTCAGGGACCAGATTCCCAGCCCCACGAACTGCTAAGCAACCCCACCTCCTAAACACATGAGTGCCGATTAACTTCACAGAAAAACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR TCA 90 bp CTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTaGAAGAACATGGTCAAGCATGTGCACAGAGAACATGCTAAAGGA +
Preference number: 1 (lower is better)
Translates to: LLSLSCWKDQVAKSM*KNMVKHVHREHAKG
Trigger: TCCTTTAGCATGTTCTCTGTGCACATGCTTGACCATGTTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR GCA 90 bp AAGATCAAGTGGCAAAAAGCATGTGAAAGAACATGGTCAAGCATGTaGACAGAGAACATGCTAAAGGATCCCATCTCTATGAAGTTCATG +
Preference number: 1 (lower is better)
Translates to: KIKWQKACERTWSSM*TENMLKDPISMKFM
Trigger: CATGAACTTCATAGAGATGGGATCCTTTAGCATGTTCTCTGTGCACATGCTTGACCATGTTCTTTCACATGCTTTTTGCCACTTGATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR TCA 90 bp CAAGTACTAAATGTTCATCTCGTTGAATCCTCACTGCAACTACTGTaGAGTAGTTCTTGTCATGTTATAGAGTTTATTTTCACCTCCACC +
Preference number: 1 (lower is better)
Translates to: QVLNVHLVESSLQLL*SSSCHVIEFIFTST
Trigger: GGTGGAGGTGAAAATAAACTCTATAACATGACAAGAACTACTTCACAGTAGTTGCAGTGAGGATTCAACGAGATGAACATTTAGTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCTGTTGGCCAGGTTGTaGGGCACAAGGGCGGGAGAG +
Preference number: 2 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVLLARL*GTRAGE
Trigger: CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR TCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCCCCGGGGATGCTGGTaGCTGTGTCCAGTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVPRGCW*LCPVSS
Trigger: GGAAGAAACTGGACACAGTCACCAGCATCCCCGGGG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR CCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTCAAGGGCGGGAGAGATaGAAGGCCAGAGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAQGRER*KARGTG
Trigger: TCCTGTCCCTCTGGCCTTCCATCTCTCCCGCCCTTG...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR CCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCACAAGGGCGGGAGAGATaGAAGGCCAGAGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: SHVVEGARQLSRASFIRAQGRER*KARGTG
Trigger: TCCTGTCCCTCTGGCCTTCCATCTCTCCCGCCCTTG...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR CCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTTTCTTCCAGTACTGTTaGCCAGGTTGTGGGGCACAA +
Preference number: 2 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGFFQYC*PGCGAQ
Trigger: TTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAA...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR CCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACGTGTTATGGGGTGCCTaGTGCCTGGCTGGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: TSLYSSLLELRQALEGEHVLWGA*CLAGAQ
Trigger: CTGAGCACCAGCCAGGCACCAGGCACCCCATAACAC...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR TCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGCTATGTGATAGGGGCTaGAGCAGCAAGAATGAGGTG +
Preference number: 2 (lower is better)
Translates to: VSSFFQYCWPGCGAQGRELCDRG*SSKNEV
Trigger: CACCTCATTCTTGCTGCTTCAGCCCCTATCACATAG...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR GCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCCAGAGGGACAGGAGTaGAATTCTTACTTTAACATC +
Preference number: 2 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVPEGQE*NSYFNI
Trigger: GATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR CAA 90 bp ATGAAAGTGTCCTGCACTCCTTGTGCTCCTTCCTCCCTCAGACCTTaGTCCAGGCTGTCTCCTCTACCTAGAATGCGCTTCCTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: MKVSCTPCAPSSLRP*SRLSPLPRMRFLLL
Trigger: AAGCAGGAGGAAGCGCATTCTAGGTAGAGGAGACAGCCTGGACAAAGGTCTGAGGGAGGAAGGAGCACAAGGAGTGCAGGACACTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCCTGTTGGCCAGGTTGTaGGGCACAAGGGCGGGAGAG +
Preference number: 2 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFALLARL*GTRAGE
Trigger: CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAG...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCTTCTTCCAGTACTGTTaGCCAGGTTGTGGGGCACAA +
Preference number: 2 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPFFQYC*PGCGAQ
Trigger: TTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAA...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR GCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCCAGAGGGACAGGAGTaGAATTCTTACTTTAACATC +
Preference number: 2 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEPEGQE*NSYFNI
Trigger: GATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCGTGTTATGGGGTGCCTaGTGCCTGGCTGGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAVLWGA*CLAGAQ
Trigger: CTGAGCACCAGCCAGGCACCAGGCACCCCATAACAC...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR TCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCACAGTTTGTTGACCTGTaGCTTAGGGCTTATGACAAG +
Preference number: 2 (lower is better)
Translates to: SHVVEGARQLSRASFIRAQFVDL*LRAYDK
Trigger: CTTGTCATAAGCCCTAAGTCACAGGTCAACAAACTG...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR GCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTAGCCGTGTTATGGGGTaGCTGGTGCCTGGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: NLVPESILTRYTSSTKCFSRVMG*LVPGWC
Trigger: GCACCAGCCAGGCACCAGGCACCCCATAACACGGCT...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR GCA 90 bp TGTTCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGCTCCTCTACCTAGAATaGGCTTCCTCCTGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: CSHVVEGARQLSRASFIRLLYLE*ASSCFF
Trigger: AAAGAAGCAGGAGGAAGCGCATTCTAGGTAGAGGAG...CCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR GCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGTGGGATTTGAACCCATaGAGCTTAGCTCCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMWDLNP*SLAPEP
Trigger: AGGCTCTGGAGCTAAGCTGCATGGGTTCAAATCCCA...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR CCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAACAAGGGCGGGAGAGATaGAAGGCCAGAGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: ASLTELLERSSGKKHVKEQGRER*KARGTG
Trigger: TCCTGTCCCTCTGGCCTTCCATCTCTCCCGCCCTTG...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAACAGGAAGCCGTGTTATaGGGTGCCTGGTGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: ASLTELLERSSGKKHVKEQEAVL*GAWCLA
Trigger: AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTG...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CCA 90 bp TTTATGTCTCATAGCTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGACTGCAGGCTGAATGGTaGAGCTGGGATTTGAACCCA +
Preference number: 2 (lower is better)
Translates to: FMSHSSGVWEVCNQCTSRLQAEW*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCACCATTCAGCCTGCAG...TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAGCTATGAGACATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCCTGCAGGCTGAATGGTaGAGCTGGGATTTGAACCCA +
Preference number: 2 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFALQAEW*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCACCATTCAGCCTGCAG...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR TCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCCTATGTGATAGGGGCTaGAGCAGCAAGAATGAGGTG +
Preference number: 2 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFALCDRG*SSKNEV
Trigger: CACCTCATTCTTGCTGCTTCAGCCCCTATCACATAG...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR TCA 90 bp GCAGCTCTCCAGGGCCTCTTTTATAAGGGCACTAATCCTATTCATGGGGGCTCCTCACTGCAACTACTGTaGAGTAGTTCTTGTCATGTT +
Preference number: 2 (lower is better)
Translates to: AALQGLFYKGTNPIHGGSSLQLL*SSSCHV
Trigger: AACATGACAAGAACTACTTCACAGTAGTTGCAGTGA...GGAGCCCCCATGAATAGGATTAGTGCCCTTATAAAAGAGGCCCTGGAGAGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR GCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCAGCTGTGATCAGAATTaGTCTTCATCGGGGCACGAC +
Preference number: 2 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFASCDQN*SSSGHD
Trigger: GTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCT...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR GCA 90 bp TTTATGTCTCATAGCTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGATGGGATTTGAACCCATaGAGCTTAGCTCCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: FMSHSSGVWEVCNQCTSRWDLNP*SLAPEP
Trigger: AGGCTCTGGAGCTAAGCTGCATGGGTTCAAATCCCA...TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAGCTATGAGACATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR GCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTCTCGCTCATGGTCTCTaGAGGCTGAATGGTGGAGCT +
Preference number: 2 (lower is better)
Translates to: NLVPESILTRYTSSTKCFLAHGL*RLNGGA
Trigger: AGCTCCACCATTCAGCCTGCAGAGACCATGAGCGAG...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR GCA 90 bp CTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCTCATGTCACCTCGCTGAACTTTaGCTTGTGTGTTTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: LVRTHFLAYRHLLAVFSCHLAEL*LVCFSV
Trigger: CACAGAAAAACACACAAGGCAAAGTTCAGCGAGGTG...ACATGAGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR CCA 90 bp TTTATGTCTCATAGCTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGATTCTTCCAGTACTGTTaGCCAGGTTGTGGGGCACAA +
Preference number: 2 (lower is better)
Translates to: FMSHSSGVWEVCNQCTSRFFQYC*PGCGAQ
Trigger: TTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAA...TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAGCTATGAGACATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCTCTCTGCAGGCTGAATaGTGGAGCTGGGATTTGAAC +
Preference number: 2 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFASLQAE*WSWDLN
Trigger: GTTCAAATCCCAGCTCCACCATTCAGCCTGCAGAGA...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR CAA 90 bp ATACTGCTTATTGGGCTTCTCATGATGACACTAATAAAGACATCATaGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: ILLIGLLMMTLIKTS*YSSLLELRQALEGE
Trigger: CTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGTCTTTATTAGTGTCATCATGAGAAGCCCAATAAGCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR GCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGTGGGATTTGAACCCATaGAGCTTAGCTCCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRWDLNP*SLAPEP
Trigger: AGGCTCTGGAGCTAAGCTGCATGGGTTCAAATCCCA...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAGTGGGGCTGGGAATCTaGTCCCTGAATCCATACTCA +
Preference number: 2 (lower is better)
Translates to: ASLTELLERSSGKKHVKEVGLGI*SLNPYS
Trigger: TGAGTATGGATTCAGGGACCAGATTCCCAGCCCCAC...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR TCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAAGTGTCCTGCACTCATaGAAGTGTCCTGCACTCCTT +
Preference number: 2 (lower is better)
Translates to: ASLTELLERSSGKKHVKESVLHS*KCPALL
Trigger: AAGGAGTGCAGGACACTTTCATGAGTGCAGGACACT...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR GCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTAGCTGTGATCAGAATTaGTCTTCATCGGGGCACGAC +
Preference number: 2 (lower is better)
Translates to: NLVPESILTRYTSSTKCFSCDQN*SSSGHD
Trigger: GTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCT...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCGGGCATACTGCTTATTaGGCTTCTCATGATGACACT +
Preference number: 2 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAGHTAY*ASHDDT
Trigger: AGTGTCATCATGAGAAGCCCAATAAGCAGTATGCCC...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR TCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGCCTCCACCTTATAGGTaGGAAAATATTGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRPPPYR*ENIGTE
Trigger: CTCTGTGCCAATATTTTCTCACCTATAAGGTGGAGG...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR CAA 90 bp TGTTATAGAGTTTATTTTCACCTCCACCTTATAGGTGAGAAAATATaGGCACAGAGAGCTCAAGTAACTCACCCACAGTCTCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: CYRVYFHLHLIGEKI*AQRAQVTHPQSLQA
Trigger: AGCCTGCAGAGACTGTGGGTGAGTTACTTGAGCTCTCTGTGCCAATATTTTCTCACCTATAAGGTGGAGGTGAAAATAAACTCTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR GCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAACCAGAGGGACAGGAGTaGAATTCTTACTTTAACATC +
Preference number: 2 (lower is better)
Translates to: ASLTELLERSSGKKHVKEPEGQE*NSYFNI
Trigger: GATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGG...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CAA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCACGACATGGCTGTTTaGCCCTCCCCGGGGATGCTG +
Preference number: 3 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVHDMAV*PSPGML
Trigger: CAGCATCCCCGGGGAGGGCAAAACAGCCATGTCGTG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR CAA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTCACGACATGGCTGTTTaGCCCTCCCCGGGGATGCTG +
Preference number: 3 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGHDMAV*PSPGML
Trigger: CAGCATCCCCGGGGAGGGCAAAACAGCCATGTCGTG...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR CAA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCGTACTGTTGGCCAGGTaGTGGGGCACAAGGGCGGGA +
Preference number: 3 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPVLLAR*WGTRAG
Trigger: TCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTAC...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR CCA 72 bp TGTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTaGGGCACAAGGGCGGGAGAGATGGAAGGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: CVQFLPVLLARL*GTRAGEMEGQR
Trigger: CCTCTGGCCTTCCATCTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR CCA 72 bp ATGCTGGTGACTGTGTCCAGTTTCTTCCAGTACTGTTaGCCAGGTTGTGGGGCACAAGGGCGGGAGAGATGG +
Preference number: 3 (lower is better)
Translates to: MLVTVSSFFQYC*PGCGAQGRERW
Trigger: CCATCTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACACAGTCACCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR CAA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTACTGTTGGCCAGGTaGTGGGGCACAAGGGCGGGA +
Preference number: 3 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAVLLAR*WGTRAG
Trigger: TCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTAC...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR GCA 72 bp GGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTaGTCAGTGAGTAACAGCTGTGATCAGAATTGCTCT +
Preference number: 3 (lower is better)
Translates to: GSRVMGCLVPGW*SVSNSCDQNCS
Trigger: AGAGCAATTCTGATCACAGCTGTTACTCACTGAGCACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR GCA 72 bp GGCTGGTGCTCAGTGAGTAACAGCTGTGATCAGAATTaGTCTTCATCGGGGCACGACATGGCTGTTTTGCCC +
Preference number: 3 (lower is better)
Translates to: GWCSVSNSCDQN*SSSGHDMAVLP
Trigger: GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGAGCACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR GCA 72 bp CTGCAGGCTGAATGGTGGAGCTGGGATTTGAACCCATaGAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCA +
Preference number: 3 (lower is better)
Translates to: LQAEWWSWDLNP*SLAPEPGLSNS
Trigger: TGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATCCCAGCTCCACCATTCAGCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CAA 90 bp TGTTCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCTTCTCTCACTGAGTaGCTGGAAAGATCAAGTGGC +
Preference number: 3 (lower is better)
Translates to: CSHVVEGARQLSRASFIRASLTE*LERSSG
Trigger: GCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC...CCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR CAA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGTGCTGGAGCTGGGATTaGAACCCATGCAGCTTAGCT +
Preference number: 3 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMCWSWD*NPCSLA
Trigger: AGCTAAGCTGCATGGGTTCAAATCCCAGCTCCAGCA...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR-3UTR CAA 90 bp GCAGCTCTCCAGGGCCTCTTTTATAAGGGCACTAATCCTATTCATGGGGGCTCCCTCAACCAAGTGCTTTaGCCTCTCAGTTTGTTGACC +
Preference number: 3 (lower is better)
Translates to: AALQGLFYKGTNPIHGGSLNQVL*PLSLLT
Trigger: GGTCAACAAACTGAGAGGCAAAAGCACTTGGTTGAG...GGAGCCCCCATGAATAGGATTAGTGCCCTTATAAAAGAGGCCCTGGAGAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR CCA 72 bp TCTGTGAAGTTAATCGGCACTCATGTGTTTAGGAGGTaGGGTTGCTTAGCAGTTCGTGGGGCTGGGAATCTG +
Preference number: 3 (lower is better)
Translates to: SVKLIGTHVFRR*GCLAVRGAGNL
Trigger: CAGATTCCCAGCCCCACGAACTGCTAAGCAACCCCACCTCCTAAACACATGAGTGCCGATTAACTTCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR CCA 72 bp CTGGGAAGTCTGCAATCAATGCACCAGCAGATTCGATaGCTGGTGAGAACCCACTTTCTTGCTTATAGGCAC +
Preference number: 3 (lower is better)
Translates to: LGSLQSMHQQIR*LVRTHFLAYRH
Trigger: GTGCCTATAAGCAAGAAAGTGGGTTCTCACCAGCCATCGAATCTGCTGGTGCATTGATTGCAGACTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
3UTR-3UTR CAA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAAGTGTCCTGCACTCCTaGTGCTCCTTCCTCCCTCAG +
Preference number: 3 (lower is better)
Translates to: ASLTELLERSSGKKHVKESVLHS*CSFLPQ
Trigger: CTGAGGGAGGAAGGAGCACAAGGAGTGCAGGACACT...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR GCA 72 bp CCAGGCTGTCTCCTCTACCTAGAATGCGCTTCCTCCTaGTTCTTTTTGCCAGCTACTATTGATCCTTTAGGA +
Preference number: 3 (lower is better)
Translates to: PGCLLYLECASS*FFLPATIDPLG
Trigger: TCCTAAAGGATCAATAGTAGCTGGCAAAAAGAAGCAGGAGGAAGCGCATTCTAGGTAGAGGAGACAGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CAA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAACTTTTGCCTCTCAGTTaGTTGACCTGTGACTTAGGG +
Preference number: 3 (lower is better)
Translates to: ASLTELLERSSGKKHVKELLPLS*LTCDLG
Trigger: CCCTAAGTCACAGGTCAACAAACTGAGAGGCAAAAG...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR-3UTR CAA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCATAGGTGAGAAAATATaGGCACAGAGAGCTCAAGTA +
Preference number: 3 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAIGEKI*AQRAQV
Trigger: TACTTGAGCTCTCTGTGCCAATATTTTCTCACCTAT...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR GCA 72 bp TGGCAAAAAGCATGTGAAAGAACATGGTCAAGCATGTaGACAGAGAACATGCTAAAGGATCCCATCTCTATG +
Preference number: 3 (lower is better)
Translates to: WQKACERTWSSM*TENMLKDPISM
Trigger: CATAGAGATGGGATCCTTTAGCATGTTCTCTGTGCACATGCTTGACCATGTTCTTTCACATGCTTTTTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTAGCACTCGGCGCCGCTaGGCGTCGGCGGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGSTRRR*ASAGRV
Trigger: CACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCT...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCACTCGGCGCCGCTaGGCGTCGGCGGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGRESTRRR*ASAGRV
Trigger: CACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCT...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTCTGCCGACTGGGGCATaGGTCCGCAACGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLALPTGA*VRNALC
Trigger: GCAGAGGGCGTTGCGGACTCATGCCCCAGTCGGCAG...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGCGGTCTGGTCCTGGTaGCACTGGACTCGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAAVWSW*HWTRRD
Trigger: GTCCCGACGAGTCCAGTGTCACCAGGACCAGACCGC...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGGGGAGGGGTGGTGGCTaGAGCACTGGTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVGRGGG*STGEGL
Trigger: CAGCCCTTCACCAGTGCTTCAGCCACCACCCCTCCC...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTAGGGGCGGTCTATGCTaGGAGCCCCACCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLARGGLC*EPHQQE
Trigger: CTCCTGCTGGTGGGGCTCTCAGCATAGACCGCCCCT...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCGTCCGCGTTCGATTaGGTCTGGCCCGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGASAFD*VWPAGG
Trigger: GCCTCCTGCGGGCCAGACGCAATCGAACGCGGACGC...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCACCACCGAGTAGTCTaGCGGCAGCGCGTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVHHRVV*RQRVRV
Trigger: AACGCGGACGCGCTGCCGCCAGACTACTCGGTGGTG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTCACCACCGAGTAGTCTaGCGGCAGCGCGTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAHHRVV*RQRVRV
Trigger: AACGCGGACGCGCTGCCGCCAGACTACTCGGTGGTG...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTCCCCGCACTGCCGACTaGGGCATGAGTCCGCAACGC +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGPRTAD*GMSPQR
Trigger: GCGTTGCGGACTCATGCCCCAGTCGGCAGTGCGGGG...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTAGCCGTGTTATGGGGTaGCTGGTGCCTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLASRVMG*LVPGWC
Trigger: GCACCAGCCAGGCACCAGGCACCCCATAACACGGCT...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTCTTGGGACCCCGCACTaGCGACTGGGGCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGLGTPH*RLGHES
Trigger: GGACTCATGCCCCAGTCGGCAGTGCGGGGTCCCAAG...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGTTGGGGAGGGCGTCATaGGTCATGAGGTGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVLGRAS*VMRWAL
Trigger: CAACGCCCACCTCATGACTCATGACGCCCTCCCCAA...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCTGCCGACTGGGGCATaGGTCCGCAACGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGELPTGA*VRNALC
Trigger: GCAGAGGGCGTTGCGGACTCATGCCCCAGTCGGCAG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCGTCGGCGGGTCGGGTaGTTGGCTCAGGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGERRRVG*LAQVGE
Trigger: CTCCCCAACCTGAGCCAAGCACCCGACCCGCCGACG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCTCTGCGCCTCGCCCTaGTTCGATGTCTCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVLCASP*FDVSFR
Trigger: TCGGAAGGAGACATCGAAGCAGGGCGAGGCGCAGAG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTTCACAGCAGGAGCCCTaGAGGTCGATGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLASQQEP*RSMAVQ
Trigger: CTGGACAGCCATCGACCTCCAGGGCTCCTGCTGTGA...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCAGGAAGCCGTGTTATaGGGTGCCTGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVQEAVL*GAWCLA
Trigger: AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGGCAGCTTCATGGCCCTaGGGTCAAAGGGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVAASWP*GQRGQS
Trigger: ACTTTGGCCCCTTTGACCTCAGGGCCATGAAGCTGC...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGAGGGGCGGTCTATGCTaGGAGCCCCACCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGERGGLC*EPHQQE
Trigger: CTCCTGCTGGTGGGGCTCTCAGCATAGACCGCCCCT...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTCCCCGGGGATGCTGGTaGCTGTGTCCAGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGPRGCW*LCPVSS
Trigger: GGAAGAAACTGGACACAGTCACCAGCATCCCCGGGG...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCATGAGGACAGGAGATaGTGGGCAGCTTCATGGCCC +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVHEDRR*WAASWP
Trigger: GGGCCATGAAGCTGCCCAGCATCTCCTGTCCTCATG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCCGTCGGCGGGTCGGGTaGTTGGCTCAGGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIRRRVG*LAQVGE
Trigger: CTCCCCAACCTGAGCCAAGCACCCGACCCGCCGACG...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCGCGTTCGATTGCGTCTaGCCCGCAGGAGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIAFDCV*PAGGPV
Trigger: GACCGGGCCTCCTGCGGGCCAGACGCAATCGAACGC...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGGTGCTTGGCTCAGGTTaGGGAGGGCGTCATGAGTCA +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVVLGSG*GGRHES
Trigger: TGACTCATGACGCCCTCCCCAACCTGAGCCAAGCAC...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCGGCGGGTCGGGTGCTTaGCTCAGGTTGGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPGGSGA*LRLGRA
Trigger: CGCCCTCCCCAACCTGAGCCAAGCACCCGACCCGCC...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGATAGCGCAGTCATCCTaGTGGACCCCGATACAGGCG +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVIAQSS*WTPIQA
Trigger: CGCCTGTATCGGGGTCCACCAGGATGACTGCGCTAT...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCTGGCTGTCCAGGGGCTaGTGGTGCCCTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIWLSRG*WCPRWC
Trigger: GCACCACCGAGGGCACCACCAGCCCCTGGACAGCCA...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGTGTTATGGGGTGCCTaGTGCCTGGCTGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGVLWGA*CLAGAQ
Trigger: CTGAGCACCAGCCAGGCACCAGGCACCCCATAACAC...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGCTGGGGAGAGAGGCGTaGCAGAGTCAGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGRELGREA*QSQQGQ
Trigger: CTGGCCCTGCTGACTCTGCCACGCCTCTCTCCCCAG...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR TCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTAGAGGCAGAGCAGAATaGCTCTGGGGACCCCCATTG +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGRGRAE*LWGPPL
Trigger: CAATGGGGGTCCCCAGAGTCATTCTGCTCTGCCTCT...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCAGGGGCGGTCTATGCTaGGAGCCCCACCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIRGGLC*EPHQQE
Trigger: CTCCTGCTGGTGGGGCTCTCAGCATAGACCGCCCCT...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCCGTGTTATGGGGTaGCTGGTGCCTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGRESRVMG*LVPGWC
Trigger: GCACCAGCCAGGCACCAGGCACCCCATAACACGGCT...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCCTTGGGACCCCGCACTaGCGACTGGGGCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSILGTPH*RLGHES
Trigger: GGACTCATGCCCCAGTCGGCAGTGCGGGGTCCCAAG...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTATAGCGCAGTCATCCTaGTGGACCCCGATACAGGCG +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGIAQSS*WTPIQA
Trigger: CGCCTGTATCGGGGTCCACCAGGATGACTGCGCTAT...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGTGCAGGAGGGCCGGTaGCAGGTTCTGATGTACACA +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGVQEGR*QVLMYT
Trigger: TGTGTACATCAGAACCTGCCACCGGCCCTCCTGCAC...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACTGGCTGTCCAGGGGCTaGTGGTGCCCTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHWLSRG*WCPRWC
Trigger: GCACCACCGAGGGCACCACCAGCCCCTGGACAGCCA...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCAGCCCTGGAGGTCGATaGCTGTCCAGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSISPGGR*LSRGWW
Trigger: CCACCAGCCCCTGGACAGCCATCGACCTCCAGGGCT...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGTTGCTTAGCAGTTCGTaGGGCTGGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVLLSSS*GWESGP
Trigger: GGGACCAGATTCCCAGCCCCACGAACTGCTAAGCAA...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACACAGGCACACGGGCCTaGCCCCTCTGCTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHTGTRA*PLCSQG
Trigger: TCCCTGGGAGCAGAGGGGCCAGGCCCGTGTGCCTGT...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR TCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCAGCGGTCTGGTCCTGGTaGCACTGGACTCGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: SHVVEGARQLSRASFIRAAVWSW*HWTRRD
Trigger: GTCCCGACGAGTCCAGTGTCACCAGGACCAGACCGC...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACGGGAGGGGTGGTGGCTaGAGCACTGGTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHGRGGG*STGEGL
Trigger: CAGCCCTTCACCAGTGCTTCAGCCACCACCCCTCCC...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGTGCCAACTGTCATTCTaGCATTGCCCTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVCQLSF*HCPGSR
Trigger: CCTGCTTCCAGGGCAATGGCAGAATGACAGTTGGCA...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTCTCGCTCATGGTCTCTaGAGGCTGAATGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGLAHGL*RLNGGA
Trigger: AGCTCCACCATTCAGCCTGCAGAGACCATGAGCGAG...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCGTCCGCAACGCCCTCTaGGCCTCGCCCTGCTTCGAT +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPVRNAL*ASPCFD
Trigger: ATCGAAGCAGGGCGAGGCGCAGAGGGCGTTGCGGAC...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGCACTGGTGAAGGGCTaGGTCATGGATTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAALVKG*VMDFLL
Trigger: CAACAGGAAATCCATGACCCAGCCCTTCACCAGTGC...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCCTGTTGGCCAGGTTGTaGGGCACAAGGGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSILLARL*GTRAGE
Trigger: CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAG...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGCAGGAAGCCGTGTTATaGGGTGCCTGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREQEAVL*GAWCLA
Trigger: AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTG...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCTGCAGGCTGAATGGTaGAGCTGGGATTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVLQAEW*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCACCATTCAGCCTGCAG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGGCAGCTTCATGGCCCTaGGGTCAAAGGGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEAASWP*GQRGQS
Trigger: ACTTTGGCCCCTTTGACCTCAGGGCCATGAAGCTGC...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTAGCACTCGGCGCCGCTaGGCGTCGGCGGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCSTRRR*ASAGRV
Trigger: CACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCT...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTCTATGTGATAGGGGCTaGAGCAGCAAGAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLALCDRG*SSKNEV
Trigger: CACCTCATTCTTGCTGCTTCAGCCCCTATCACATAG...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCGTCGGCGGGTCGGGTaGTTGGCTCAGGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPRRRVG*LAQVGE
Trigger: CTCCCCAACCTGAGCCAAGCACCCGACCCGCCGACG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTTCATGGATTTCCTGTTaGAGAGGTACCCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLASWISC*RGTPHS
Trigger: GCTGTGAGGGGTACCTCTGCAACAGGAAATCCATGA...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGAGCTGTGATCAGAATTaGTCTTCATCGGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVSCDQN*SSSGHD
Trigger: GTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCT...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACAGCCGTGTTATGGGGTaGCTGGTGCCTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHSRVMG*LVPGWC
Trigger: GCACCAGCCAGGCACCAGGCACCCCATAACACGGCT...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTTGGGATTTGAACCCATaGAGCTTAGCTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAWDLNP*SLAPEP
Trigger: AGGCTCTGGAGCTAAGCTGCATGGGTTCAAATCCCA...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGGTCCTGCACTCCTTGTaGTCCTTCCTCCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREVLHSL*SFLPQT
Trigger: GGTCTGAGGGAGGAAGGAGCACAAGGAGTGCAGGAC...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTACCAGGTGCTGCTATTaGAGCTGGTCACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGTRCCY*SWSQLC
Trigger: ACACAGCTGTGACCAGCTGCAATAGCAGCACCTGGT...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR GCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTCGGGCCTGGCCCCTCTaGTCCCAGGGAAGACACGCC +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMARAWPL*SQGRHA
Trigger: GGCGTGTCTTCCCTGGGAGCAGAGGGGCCAGGCCCG...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR CCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCGCGTTCGATTGCGTCTaGCCCGCAGGAGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPAFDCV*PAGGPV
Trigger: GACCGGGCCTCCTGCGGGCCAGACGCAATCGAACGC...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGTGGTGGTGCCCTCGGTaGTGCAGGAGGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMWWCPR*CRRAGG
Trigger: GCCACCGGCCCTCCTGCACCACCGAGGGCACCACCA...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTGGCTGTCCAGGGGCTaGTGGTGCCCTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPWLSRG*WCPRWC
Trigger: GCACCACCGAGGGCACCACCAGCCCCTGGACAGCCA...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCGTGTTATGGGGTGCCTaGTGCCTGGCTGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIVLWGA*CLAGAQ
Trigger: CTGAGCACCAGCCAGGCACCAGGCACCCCATAACAC...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCCAGGAAGCCGTGTTATaGGGTGCCTGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIQEAVL*GAWCLA
Trigger: AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTG...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGGGGCGTCATGAGTCATaGGGTGGGCGTTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREGRHES*GGRCIC
Trigger: ACAAATGCAACGCCCACCTCATGACTCATGACGCCC...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCATTGGGGAGGGCGTCATaGGTCATGAGGTGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: SHVVEGARQLSRASFIRALGRAS*VMRWAL
Trigger: CAACGCCCACCTCATGACTCATGACGCCCTCCCCAA...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCGCGGTCTGGTCCTGGTaGCACTGGACTCGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPAVWSW*HWTRRD
Trigger: GTCCCGACGAGTCCAGTGTCACCAGGACCAGACCGC...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTCTATGTGATAGGGGCTaGAGCAGCAAGAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGLCDRG*SSKNEV
Trigger: CACCTCATTCTTGCTGCTTCAGCCCCTATCACATAG...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGTGCATTTGTCAGTTGTaGAGCCGCGCACCACCGAGT +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGECICQL*SRAPPS
Trigger: ACTCGGTGGTGCGCGGCTGCACAACTGACAAATGCA...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp CTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCTCATGTCGTCGGCGGGTCGGGTaGTTGGCTCAGGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LVRTHFLAYRHLLAVFSCRRRVG*LAQVGE
Trigger: CTCCCCAACCTGAGCCAAGCACCCGACCCGCCGACG...ACATGAGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR GCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCTGGTGCCTGGCTGGTaGTCAGTGAGTAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGELVPGW*SVSNSC
Trigger: ACAGCTGTTACTCACTGAGCACCAGCCAGGCACCAG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTCTCGTCCTCCTAAGGTaGTGGAATTACAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLALVLLR*WNYKCE
Trigger: CTCACACTTGTAATTCCAGCACCTTAGGAGGACGAG...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS-3UTR CCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCACCACCGAGTAGTCTaGCGGCAGCGCGTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPHHRVV*RQRVRV
Trigger: AACGCGGACGCGCTGCCGCCAGACTACTCGGTGGTG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCGTGCTTGGCTCAGGTTaGGGAGGGCGTCATGAGTCA +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIVLGSG*GGRHES
Trigger: TGACTCATGACGCCCTCCCCAACCTGAGCCAAGCAC...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTCTGTCCAGGGGCTGGTaGTGCCCTCGGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMALSRGW*CPRWCR
Trigger: CCTGCACCACCGAGGGCACCACCAGCCCCTGGACAG...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTCATGTGTTTAGGAGGTaGGGTTGCTTAGCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAHVFRR*GCLAVR
Trigger: ACGAACTGCTAAGCAACCCCACCTCCTAAACACATG...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGCCCCGCACTGCCGACTaGGGCATGAGTCCGCAACGC +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMPRTAD*GMSPQR
Trigger: GCGTTGCGGACTCATGCCCCAGTCGGCAGTGCGGGG...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACGCCTCAAAGCACTCATaGGGACAGGAGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHASKHS*GQEMLG
Trigger: GCCCAGCATCTCCTGTCCTCATGAGTGCTTTGAGGC...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAAGCACTCGGCGCCGCTaGGCGTCGGCGGGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKESTRRR*ASAGRV
Trigger: CACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCT...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGAGGGGCGGTCTATGCTaGGAGCCCCACCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMRGGLC*EPHQQE
Trigger: CTCCTGCTGGTGGGGCTCTCAGCATAGACCGCCCCT...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTCAGTTTGTTGACCTGTaGCTTAGGGCTTATGACAAG +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAQFVDL*LRAYDK
Trigger: CTTGTCATAAGCCCTAAGTCACAGGTCAACAAACTG...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACCATGAGGACAGGAGATaGTGGGCAGCTTCATGGCCC +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHHEDRR*WAASWP
Trigger: GGGCCATGAAGCTGCCCAGCATCTCCTGTCCTCATG...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCAGGGACTGAGAAATTaGCAACTGTCATTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVQGLRN*QLSFCH
Trigger: ATGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCCTCGCTCATGGTCTCTaGAGGCTGAATGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSILAHGL*RLNGGA
Trigger: AGCTCCACCATTCAGCCTGCAGAGACCATGAGCGAG...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGTTTAGGAGGTGGGGTTaGTTAGCAGTTCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREFRRWG*LAVRGA
Trigger: AGCCCCACGAACTGCTAAGCAACCCCACCTCCTAAA...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCACCTCGCTGAACTTTaGCTTGTGTGTTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVHLAEL*LVCFSV
Trigger: CACAGAAAAACACACAAGGCAAAGTTCAGCGAGGTG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCGTCCTGCACTCCTTGTaGTCCTTCCTCCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPVLHSL*SFLPQT
Trigger: GGTCTGAGGGAGGAAGGAGCACAAGGAGTGCAGGAC...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACGTGCTTGGCTCAGGTTaGGGAGGGCGTCATGAGTCA +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHVLGSG*GGRHES
Trigger: TGACTCATGACGCCCTCCCCAACCTGAGCCAAGCAC...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCGGCGGGTCGGGTGCTTaGCTCAGGTTGGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAGGSGA*LRLGRA
Trigger: CGCCCTCCCCAACCTGAGCCAAGCACCCGACCCGCC...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCAATAGCGCAGTCATCCTaGTGGACCCCGATACAGGCG +
Preference number: 4 (lower is better)
Translates to: SHVVEGARQLSRASFIRAIAQSS*WTPIQA
Trigger: CGCCTGTATCGGGGTCCACCAGGATGACTGCGCTAT...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACATTCTGCCATTGCCCTaGAAGCAGGCGGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHILPLP*KQAVWS
Trigger: GGACCAGACCGCCTGCTTCCAGGGCAATGGCAGAAT...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCATTCTGCCATTGCCCTaGAAGCAGGCGGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPILPLP*KQAVWS
Trigger: GGACCAGACCGCCTGCTTCCAGGGCAATGGCAGAAT...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCAGTGCAGGAGGGCCGGTaGCAGGTTCTGATGTACACA +
Preference number: 4 (lower is better)
Translates to: SHVVEGARQLSRASFIRAVQEGR*QVLMYT
Trigger: TGTGTACATCAGAACCTGCCACCGGCCCTCCTGCAC...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTTGGTGGTGCCCTCGGTaGTGCAGGAGGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCWWCPR*CRRAGG
Trigger: GCCACCGGCCCTCCTGCACCACCGAGGGCACCACCA...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTAGCCCTGGAGGTCGATaGCTGTCCAGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMASPGGR*LSRGWW
Trigger: CCACCAGCCCCTGGACAGCCATCGACCTCCAGGGCT...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGAGCCCTGGAGGTCGATaGCTGTCCAGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMSPGGR*LSRGWW
Trigger: CCACCAGCCCCTGGACAGCCATCGACCTCCAGGGCT...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCTGCAGGCTGAATGGTaGAGCTGGGATTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGELQAEW*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCACCATTCAGCCTGCAG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGGCTGAATGCTGGAGCTaGGATTTGAACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEAECWS*DLNPCS
Trigger: GCTGCATGGGTTCAAATCCCAGCTCCAGCATTCAGC...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGGCTGAATGCTGGAGCTaGGATTTGAACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREAECWS*DLNPCS
Trigger: GCTGCATGGGTTCAAATCCCAGCTCCAGCATTCAGC...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
3UTR CAA 72 bp GATGCTGGTGACTGTGTCCAGTTTCTTCCAGTACTGTaGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: DAGDCVQFLPVL*ARLWGTRAGEM
Trigger: CATCTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACACAGTCACCAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp CTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCTCATGTCAGCTCCTCCCGCTGTaGTGTGCTGCCTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LVRTHFLAYRHLLAVFSCQLLPL*CAAWLV
Trigger: AACCAGCCAGGCAGCACATCACAGCGGGAGGAGCTG...ACATGAGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCGGGCGTCATGAGTCATaGGGTGGGCGTTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPGRHES*GGRCIC
Trigger: ACAAATGCAACGCCCACCTCATGACTCATGACGCCC...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTTGGGGAGGGCGTCATaGGTCATGAGGTGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPLGRAS*VMRWAL
Trigger: CAACGCCCACCTCATGACTCATGACGCCCTCCCCAA...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GCAGCTCTCCAGGGCCTCTTTTATAAGGGCACTAATCCTATTCATGGGGGCTCCGCCGGTGGCAGGTTCTaGTGTACACAGGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: AALQGLFYKGTNPIHGGSAGGRF*CTQGLR
Trigger: TCTCAGTCCCTGTGTACATCAGAACCTGCCACCGGC...GGAGCCCCCATGAATAGGATTAGTGCCCTTATAAAAGAGGCCCTGGAGAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCCCCGGGGATGCTGGTaGCTGTGTCCAGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPPRGCW*LCPVSS
Trigger: GGAAGAAACTGGACACAGTCACCAGCATCCCCGGGG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGATGGTCTCTGTAGGCTaGATGCTGGAGCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREMVSVG*MLELGF
Trigger: AAATCCCAGCTCCAGCATTCAGCCTACAGAGACCAT...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTCAGTTTGTTGACCTGTaGCTTAGGGCTTATGACAAG +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGQFVDL*LRAYDK
Trigger: CTTGTCATAAGCCCTAAGTCACAGGTCAACAAACTG...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGTGGCAAAAAGCATGTaGAAGAACATGGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAVAKSM*KNMVKH
Trigger: ATGCTTGACCATGTTCTTTCACATGCTTTTTGCCAC...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACCTGTCATTCTGCCATTaGCCTGGAAGCAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHLSFCH*PGSRRS
Trigger: AGACCGCCTGCTTCCAGGGCAATGGCAGAATGACAG...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCTGCCAACTGTCATTCTaGCATTGCCCTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSICQLSF*HCPGSR
Trigger: CCTGCTTCCAGGGCAATGGCAGAATGACAGTTGGCA...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCCTGGTGCCTGGCTGGTaGTCAGTGAGTAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPLVPGW*SVSNSC
Trigger: ACAGCTGTTACTCACTGAGCACCAGCCAGGCACCAG...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGTGGGATTTGAACCCATaGAGCTTAGCTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREWDLNP*SLAPEP
Trigger: AGGCTCTGGAGCTAAGCTGCATGGGTTCAAATCCCA...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGTTATGAAAGTGTCCTaGACTCATGAAAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAVMKVS*THESVL
Trigger: CAGGACACTTTCATGAGTGCAGGACACTTTCATAAC...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGGTTATGAAAGTGTCCTaGACTCATGAAAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVVMKVS*THESVL
Trigger: CAGGACACTTTCATGAGTGCAGGACACTTTCATAAC...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGCGTTCGATTGCGTCTaGCCCGCAGGAGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCAFDCV*PAGGPV
Trigger: GACCGGGCCTCCTGCGGGCCAGACGCAATCGAACGC...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCGCGTTCGATTGCGTCTaGCCCGCAGGAGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAAFDCV*PAGGPV
Trigger: GACCGGGCCTCCTGCGGGCCAGACGCAATCGAACGC...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGGGCGGGTCGGGTGCTTaGCTCAGGTTGGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRGGSGA*LRLGRA
Trigger: CGCCCTCCCCAACCTGAGCCAAGCACCCGACCCGCC...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTTGGTGGTGCCCTCGGTaGTGCAGGAGGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFWWCPR*CRRAGG
Trigger: GCCACCGGCCCTCCTGCACCACCGAGGGCACCACCA...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCTGGCTGTCCAGGGGCTaGTGGTGCCCTCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAWLSRG*WCPRWC
Trigger: GCACCACCGAGGGCACCACCAGCCCCTGGACAGCCA...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCGTGTTATGGGGTGCCTaGTGCCTGGCTGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPVLWGA*CLAGAQ
Trigger: CTGAGCACCAGCCAGGCACCAGGCACCCCATAACAC...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCGTGGGGCTGGGAATCTaGTCCCTGAATCCATACTCA +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIVGLGI*SLNPYS
Trigger: TGAGTATGGATTCAGGGACCAGATTCCCAGCCCCAC...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR CAA 72 bp TCCTGCACTCCTTGTGCTCCTTCCTCCCTCAGACCTTaGTCCAGGCTGTCTCCTCTACCTAGAATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SCTPCAPSSLRP*SRLSPLPRMRF
Trigger: GAAGCGCATTCTAGGTAGAGGAGACAGCCTGGACAAAGGTCTGAGGGAGGAAGGAGCACAAGGAGTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCGCGGTCTGGTCCTGGTaGCACTGGACTCGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAAVWSW*HWTRRD
Trigger: GTCCCGACGAGTCCAGTGTCACCAGGACCAGACCGC...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCGCCGGTGGCAGGTTCTaGTGTACACAGGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPAGGRF*CTQGLR
Trigger: TCTCAGTCCCTGTGTACATCAGAACCTGCCACCGGC...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCATGGTCTCTGTAGGCTaGATGCTGGAGCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIMVSVG*MLELGF
Trigger: AAATCCCAGCTCCAGCATTCAGCCTACAGAGACCAT...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp CTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCTCATGTGGGGCTCCACCCTCATaGTCTCACCACCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LVRTHFLAYRHLLAVFSCGAPPS*SHHLPK
Trigger: CTTTGGGAGGTGGTGAGATCATGAGGGTGGAGCCCC...ACATGAGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR GCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCTGGGATTTGAACCCATaGAGCTTAGCTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIWDLNP*SLAPEP
Trigger: AGGCTCTGGAGCTAAGCTGCATGGGTTCAAATCCCA...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTACAAGCTCAACCAAGTaGTTTTGCCTCTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGTSSTK*FCLSVC
Trigger: ACAAACTGAGAGGCAAAAGCACTTGGTTGAGCTTGT...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCTCCTCTACCTAGAATaGGCTTCCTCCTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGELLYLE*ASSCFF
Trigger: AAAGAAGCAGGAGGAAGCGCATTCTAGGTAGAGGAG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGCACTGCGCCTTGTCTTaGTTCTCTGTTTCTATCTCC +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREHCALS*FSVSIS
Trigger: GGAGATAGAAACAGAGAAGCAAGACAAGGCGCAGTG...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCCACCACCGAGTAGTCTaGCGGCAGCGCGTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAHHRVV*RQRVRV
Trigger: AACGCGGACGCGCTGCCGCCAGACTACTCGGTGGTG...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTGGCGGGTCGGGTGCTTaGCTCAGGTTGGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFGGSGA*LRLGRA
Trigger: CGCCCTCCCCAACCTGAGCCAAGCACCCGACCCGCC...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCATTCTGCCATTGCCCTaGAAGCAGGCGGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPILPLP*KQAVWS
Trigger: GGACCAGACCGCCTGCTTCCAGGGCAATGGCAGAAT...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGGTGGTGCCCTCGGTaGTGCAGGAGGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFWWCPR*CRRAGG
Trigger: GCCACCGGCCCTCCTGCACCACCGAGGGCACCACCA...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTCTGTCCAGGGGCTGGTaGTGCCCTCGGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFLSRGW*CPRWCR
Trigger: CCTGCACCACCGAGGGCACCACCAGCCCCTGGACAG...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTTCACAGCAGGAGCCCTaGAGGTCGATGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMASQQEP*RSMAVQ
Trigger: CTGGACAGCCATCGACCTCCAGGGCTCCTGCTGTGA...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGCAAGGGCGGGAGAGATaGAAGGCCAGAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMQGRER*KARGTG
Trigger: TCCTGTCCCTCTGGCCTTCCATCTCTCCCGCCCTTG...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTCAAGGGCGGGAGAGATaGAAGGCCAGAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAQGRER*KARGTG
Trigger: TCCTGTCCCTCTGGCCTTCCATCTCTCCCGCCCTTG...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCGCTGAATGGTGGAGCTaGGATTTGAACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPAEWWS*DLNPCS
Trigger: GCTGCATGGGTTCAAATCCCAGCTCCACCATTCAGC...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCATAGCTCTGGAGTCTaGGAAGTCTGCAATCAATGC +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEHSSGV*EVCNQC
Trigger: GCATTGATTGCAGACTTCCCAGACTCCAGAGCTATG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTCAGGGCTTGGGACCCTaGGGAGAGAGGCGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCQGLGP*GERRGR
Trigger: TCTGCCACGCCTCTCTCCCCAGGGTCCCAAGCCCTG...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR TCA 90 bp CTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCTCATGTGCAGCTTCATGGCCCTaGGGTCAAAGGGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LVRTHFLAYRHLLAVFSCAASWP*GQRGQS
Trigger: ACTTTGGCCCCTTTGACCTCAGGGCCATGAAGCTGC...ACATGAGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGGCCTCAAAGCACTCATaGGGACAGGAGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMASKHS*GQEMLG
Trigger: GCCCAGCATCTCCTGTCCTCATGAGTGCTTTGAGGC...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGGCCGGTGGCAGGTTCTaGTGTACACAGGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMAGGRF*CTQGLR
Trigger: TCTCAGTCCCTGTGTACATCAGAACCTGCCACCGGC...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTGGGAGGGGTGGTGGCTaGAGCACTGGTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFGRGGG*STGEGL
Trigger: CAGCCCTTCACCAGTGCTTCAGCCACCACCCCTCCC...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACCTATGTGATAGGGGCTaGAGCAGCAAGAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHLCDRG*SSKNEV
Trigger: CACCTCATTCTTGCTGCTTCAGCCCCTATCACATAG...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCAATGGTCTCTGTAGGCTaGATGCTGGAGCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: SHVVEGARQLSRASFIRAMVSVG*MLELGF
Trigger: AAATCCCAGCTCCAGCATTCAGCCTACAGAGACCAT...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCAGTTTGTTGACCTGTaGCTTAGGGCTTATGACAAG +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEQFVDL*LRAYDK
Trigger: CTTGTCATAAGCCCTAAGTCACAGGTCAACAAACTG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGGATTTTGCTCAAGGGTaGATTCCTCCAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREDFAQG*IPPGSL
Trigger: AAGACTTCCTGGAGGAATTCACCCTTGAGCAAAATC...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACTCATGGATTTCCTGTTaGAGAGGTACCCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHSWISC*RGTPHS
Trigger: GCTGTGAGGGGTACCTCTGCAACAGGAAATCCATGA...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCTGGTGCCTGGCTGGTaGTCAGTGAGTAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPLVPGW*SVSNSC
Trigger: ACAGCTGTTACTCACTGAGCACCAGCCAGGCACCAG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCACCTCGCTGAACTTTaGCTTGTGTGTTTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEHLAEL*LVCFSV
Trigger: CACAGAAAAACACACAAGGCAAAGTTCAGCGAGGTG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCCTCCTCTACCTAGAATaGGCTTCCTCCTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSILLYLE*ASSCFF
Trigger: AAAGAAGCAGGAGGAAGCGCATTCTAGGTAGAGGAG...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGGTCCGCAACGCCCTCTaGGCCTCGCCCTGCTTCGAT +
Preference number: 4 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRVRNAL*ASPCFD
Trigger: ATCGAAGCAGGGCGAGGCGCAGAGGGCGTTGCGGAC...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTCTGTCCAGGGGCTGGTaGTGCCCTCGGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFLSRGW*CPRWCR
Trigger: CCTGCACCACCGAGGGCACCACCAGCCCCTGGACAG...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTCTGTTGGCCAGGTTGTaGGGCACAAGGGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCLLARL*GTRAGE
Trigger: CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAG...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACTTCTTCCAGTACTGTTaGCCAGGTTGTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHFFQYC*PGCGAQ
Trigger: TTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAA...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGGGGCATACTGCTTATTaGGCTTCTCATGATGACACT +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREGHTAY*ASHDDT
Trigger: AGTGTCATCATGAGAAGCCCAATAAGCAGTATGCCC...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGGGGCATACTGCTTATTaGGCTTCTCATGATGACACT +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEGHTAY*ASHDDT
Trigger: AGTGTCATCATGAGAAGCCCAATAAGCAGTATGCCC...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCTCTCTGCAGGCTGAATaGTGGAGCTGGGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPSLQAE*WSWDLN
Trigger: GTTCAAATCCCAGCTCCACCATTCAGCCTGCAGAGA...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGGGCGTCATGAGTCATaGGGTGGGCGTTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAGRHES*GGRCIC
Trigger: ACAAATGCAACGCCCACCTCATGACTCATGACGCCC...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAGGGAGGGGTGGTGGCTaGAGCACTGGTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKEGRGGG*STGEGL
Trigger: CAGCCCTTCACCAGTGCTTCAGCCACCACCCCTCCC...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGAGAATTTCACCTCGCTaGACTTTGCCTTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGERISPR*TLPCVF
Trigger: AAACACACAAGGCAAAGTTCAGCGAGGTGAAATTCT...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGGTGGCAAAAAGCATGTaGAAGAACATGGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEVAKSM*KNMVKH
Trigger: ATGCTTGACCATGTTCTTTCACATGCTTTTTGCCAC...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGTTTTGCTTCTCTCACTaGGTTGCTGGAAAGATCAAG +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEFCFSH*VAGKIK
Trigger: CTTGATCTTTCCAGCAACTCAGTGAGAGAAGCAAAA...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTTGCATTTGTCAGTTGTaGAGCCGCGCACCACCGAGT +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMACICQL*SRAPPS
Trigger: ACTCGGTGGTGCGCGGCTGCACAACTGACAAATGCA...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTCTGTCATTCTGCCATTaGCCTGGAAGCAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMALSFCH*PGSRRS
Trigger: AGACCGCCTGCTTCCAGGGCAATGGCAGAATGACAG...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGCCAGAGGGACAGGAGTaGAATTCTTACTTTAACATC +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREPEGQE*NSYFNI
Trigger: GATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGG...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGCTCGCTCATGGTCTCTaGAGGCTGAATGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMLAHGL*RLNGGA
Trigger: AGCTCCACCATTCAGCCTGCAGAGACCATGAGCGAG...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGACAAGCTCAACCAAGTaGTTTTGCCTCTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGETSSTK*FCLSVC
Trigger: ACAAACTGAGAGGCAAAAGCACTTGGTTGAGCTTGT...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCCTCCTGCTTCTTTTTaGCAGCTACTATTGATCCTT +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEPPASF*QLLLIL
Trigger: AAGGATCAATAGTAGCTGGCAAAAAGAAGCAGGAGG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCCTCCTCTACCTAGAATaGGCTTCCTCCTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPLLYLE*ASSCFF
Trigger: AAAGAAGCAGGAGGAAGCGCATTCTAGGTAGAGGAG...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp TGTTCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGGAGTCTGGGAAGTCTaGAATCAATGCACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: CSHVVEGARQLSRASFIRGVWEV*NQCTSR
Trigger: TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCC...CCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR GCA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGGTCTTAGTCTCCAAGTaGATGCTTTTCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEVLVSK*MLFSFL
Trigger: GAGAAAGGAGAAAAGCATGCACTTGGAGACTAAGAC...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS-3UTR CCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAAGCCCTGGAGGTCGATaGCTGTCCAGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKESPGGR*LSRGWW
Trigger: CCACCAGCCCCTGGACAGCCATCGACCTCCAGGGCT...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTTCACAGCAGGAGCCCTaGAGGTCGATGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCSQQEP*RSMAVQ
Trigger: CTGGACAGCCATCGACCTCCAGGGCTCCTGCTGTGA...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TGTTCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGTTCTTCCAGTACTGTTaGCCAGGTTGTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: CSHVVEGARQLSRASFIRFFQYC*PGCGAQ
Trigger: TTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAA...CCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCTGCAGGCTGAATGGTaGAGCTGGGATTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPLQAEW*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCACCATTCAGCCTGCAG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCGCTGAATGCTGGAGCTaGGATTTGAACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPAECWS*DLNPCS
Trigger: GCTGCATGGGTTCAAATCCCAGCTCCAGCATTCAGC...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCAGATGTACACAGGGACTaGGAAATTGCCAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: SHVVEGARQLSRASFIRADVHRD*EIANCH
Trigger: ATGACAGTTGGCAATTTCTCAGTCCCTGTGTACATC...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACGATGTACACAGGGACTaGGAAATTGCCAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHDVHRD*EIANCH
Trigger: ATGACAGTTGGCAATTTCTCAGTCCCTGTGTACATC...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCGATGTACACAGGGACTaGGAAATTGCCAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPDVHRD*EIANCH
Trigger: ATGACAGTTGGCAATTTCTCAGTCCCTGTGTACATC...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCAGATTTTGCTCAAGGGTaGATTCCTCCAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SHVVEGARQLSRASFIRADFAQG*IPPGSL
Trigger: AAGACTTCCTGGAGGAATTCACCCTTGAGCAAAATC...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGGATCCCATCTCTATaGAGTTCATGCAGTTATGAA +
Preference number: 4 (lower is better)
Translates to: VSSFFQYCWPGCGAQGRERIPSL*SSCSYE
Trigger: TTCATAACTGCATGAACTTCATAGAGATGGGATCCT...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGTGCCAACTGTCATTCTaGCATTGCCCTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMCQLSF*HCPGSR
Trigger: CCTGCTTCCAGGGCAATGGCAGAATGACAGTTGGCA...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGGCACAGGGACTGAGAAATTaGCAACTGTCATTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SHVVEGARQLSRASFIRAQGLRN*QLSFCH
Trigger: ATGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTG...TGCCCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR GCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCCAGGGACTGAGAAATTaGCAACTGTCATTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPQGLRN*QLSFCH
Trigger: ATGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTG...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCATGGATTTCCTGTTaGAGAGGTACCCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPSWISC*RGTPHS
Trigger: GCTGTGAGGGGTACCTCTGCAACAGGAAATCCATGA...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCCCAGAGGGACAGGAGTaGAATTCTTACTTTAACATC +
Preference number: 4 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIPEGQE*NSYFNI
Trigger: GATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGG...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCAGCTGTGATCAGAATTaGTCTTCATCGGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPSCDQN*SSSGHD
Trigger: GTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCT...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAAGCCGTGTTATGGGGTaGCTGGTGCCTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKESRVMG*LVPGWC
Trigger: GCACCAGCCAGGCACCAGGCACCCCATAACACGGCT...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGTTTAGGAGGTGGGGTTaGTTAGCAGTTCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMFRRWG*LAVRGA
Trigger: AGCCCCACGAACTGCTAAGCAACCCCACCTCCTAAA...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCATAGCGCAGTCATCCTaGTGGACCCCGATACAGGCG +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAIAQSS*WTPIQA
Trigger: CGCCTGTATCGGGGTCCACCAGGATGACTGCGCTAT...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGCACTGGTGAAGGGCTaGGTCATGGATTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAALVKG*VMDFLL
Trigger: CAACAGGAAATCCATGACCCAGCCCTTCACCAGTGC...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGCAAGGGCGGGAGAGATaGAAGGCCAGAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRQGRER*KARGTG
Trigger: TCCTGTCCCTCTGGCCTTCCATCTCTCCCGCCCTTG...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTCTGTTGGCCAGGTTGTaGGGCACAAGGGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFLLARL*GTRAGE
Trigger: CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAG...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGCTGAATGGTGGAGCTaGGATTTGAACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAAEWWS*DLNPCS
Trigger: GCTGCATGGGTTCAAATCCCAGCTCCACCATTCAGC...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGGCCTCAAAGCACTCATaGGGACAGGAGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRASKHS*GQEMLG
Trigger: GCCCAGCATCTCCTGTCCTCATGAGTGCTTTGAGGC...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTTGGGGAGGGCGTCATaGGTCATGAGGTGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFLGRAS*VMRWAL
Trigger: CAACGCCCACCTCATGACTCATGACGCCCTCCCCAA...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp CTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCTCATGTCTATGTGATAGGGGCTaGAGCAGCAAGAATGAGGTG +
Preference number: 4 (lower is better)
Translates to: LVRTHFLAYRHLLAVFSCLCDRG*SSKNEV
Trigger: CACCTCATTCTTGCTGCTTCAGCCCCTATCACATAG...ACATGAGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR TCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCAGAATTTCACCTCGCTaGACTTTGCCTTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPRISPR*TLPCVF
Trigger: AAACACACAAGGCAAAGTTCAGCGAGGTGAAATTCT...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACAGAATTTCACCTCGCTaGACTTTGCCTTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHRISPR*TLPCVF
Trigger: AAACACACAAGGCAAAGTTCAGCGAGGTGAAATTCT...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGAGTGTCCTGCACTCATaGAAGTGTCCTGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMSVLHS*KCPALL
Trigger: AAGGAGTGCAGGACACTTTCATGAGTGCAGGACACT...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACTTTTGCTTCTCTCACTaGGTTGCTGGAAAGATCAAG +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHFCFSH*VAGKIK
Trigger: CTTGATCTTTCCAGCAACTCAGTGAGAGAAGCAAAA...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTAGGGAAGACACGCCTTaGGAGACCAGGTGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCREDTP*ETRCCY
Trigger: ATAGCAGCACCTGGTCTCTCAAGGCGTGTCTTCCCT...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR TCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGCTGGAATTACAAGTGTaGGCCACTGCGCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMLELQV*ATAPCL
Trigger: AAGACAAGGCGCAGTGGCTCACACTTGTAATTCCAG...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS-3UTR GCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTTGCATTTGTCAGTTGTaGAGCCGCGCACCACCGAGT +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCCICQL*SRAPPS
Trigger: ACTCGGTGGTGCGCGGCTGCACAACTGACAAATGCA...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TTTATGTCTCATAGCTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGACTGTCATTCTGCCATTaGCCTGGAAGCAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: FMSHSSGVWEVCNQCTSRLSFCH*PGSRRS
Trigger: AGACCGCCTGCTTCCAGGGCAATGGCAGAATGACAG...TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAGCTATGAGACATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR GCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTCTGTCATTCTGCCATTaGCCTGGAAGCAGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCLSFCH*PGSRRS
Trigger: AGACCGCCTGCTTCCAGGGCAATGGCAGAATGACAG...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACACAAGCTCAACCAAGTaGTTTTGCCTCTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHTSSTK*FCLSVC
Trigger: ACAAACTGAGAGGCAAAAGCACTTGGTTGAGCTTGT...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAACTCTGCGCCTCGCCCTaGTTCGATGTCTCCTTCCGA +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKELCASP*FDVSFR
Trigger: TCGGAAGGAGACATCGAAGCAGGGCGAGGCGCAGAG...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTTGCCATTGCTGAGCTaGGCCACCTGGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFLPLLS*ATWDSS
Trigger: GGAGCTGTCCCAGGTGGCCCAGCTCAGCAATGGCAA...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTGTGCTTGGCTCAGGTTaGGGAGGGCGTCATGAGTCA +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFVLGSG*GGRHES
Trigger: TGACTCATGACGCCCTCCCCAACCTGAGCCAAGCAC...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGGTGCAGGAGGGCCGGTaGCAGGTTCTGATGTACACA +
Preference number: 4 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRVQEGR*QVLMYT
Trigger: TGTGTACATCAGAACCTGCCACCGGCCCTCCTGCAC...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTTTCTTCCAGTACTGTTaGCCAGGTTGTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAFFQYC*PGCGAQ
Trigger: TTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAA...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGTCTCTGCAGGCTGAATaGTGGAGCTGGGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMSLQAE*WSWDLN
Trigger: GTTCAAATCCCAGCTCCACCATTCAGCCTGCAGAGA...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTTTGCTTAGCAGTTCGTaGGGCTGGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCLLSSS*GWESGP
Trigger: GGGACCAGATTCCCAGCCCCACGAACTGCTAAGCAA...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCGCTGTGTCTGTCTCATaGCAGAGTAATGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPAVSVS*QSNDLS
Trigger: AGAGAGGTCATTACTCTGCCATGAGACAGACACAGC...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR TCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAGCCTCAAAGCACTCATaGGGACAGGAGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKEASKHS*GQEMLG
Trigger: GCCCAGCATCTCCTGTCCTCATGAGTGCTTTGAGGC...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTGGGCGTCATGAGTCATaGGGTGGGCGTTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFGRHES*GGRCIC
Trigger: ACAAATGCAACGCCCACCTCATGACTCATGACGCCC...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR TCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTGCCGGTGGCAGGTTCTaGTGTACACAGGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFAGGRF*CTQGLR
Trigger: TCTCAGTCCCTGTGTACATCAGAACCTGCCACCGGC...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCAAATGTTCATCTCGTTaGATCCTCACTGCAACTACT +
Preference number: 4 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPKCSSR*ILTATT
Trigger: AGTAGTTGCAGTGAGGATTCAACGAGATGAACATTT...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACAAATGTTCATCTCGTTaGATCCTCACTGCAACTACT +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHKCSSR*ILTATT
Trigger: AGTAGTTGCAGTGAGGATTCAACGAGATGAACATTT...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTCCCGCTGTGATGTGCTaGCTGGCTGGTTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFPAVMC*LAGSPY
Trigger: GTAAGGAGAACCAGCCAGGCAGCACATCACAGCGGG...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR GCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTCATGAGGACAGGAGATaGTGGGCAGCTTCATGGCCC +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFHEDRR*WAASWP
Trigger: GGGCCATGAAGCTGCCCAGCATCTCCTGTCCTCATG...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGTGCATTTGTCAGTTGTaGAGCCGCGCACCACCGAGT +
Preference number: 4 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRCICQL*SRAPPS
Trigger: ACTCGGTGGTGCGCGGCTGCACAACTGACAAATGCA...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTCTCGCTCATGGTCTCTaGAGGCTGAATGGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFLAHGL*RLNGGA
Trigger: AGCTCCACCATTCAGCCTGCAGAGACCATGAGCGAG...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACTCGTTGAATCCTCACTaGAACTACTGTGAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: TSLYSSLLELRQALEGEHSLNPH*NYCEVV
Trigger: AACTACTTCACAGTAGTTGCAGTGAGGATTCAACGA...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp TTTATGTCTCATAGCTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGATTTAGGAGGTGGGGTTaGTTAGCAGTTCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FMSHSSGVWEVCNQCTSRFRRWG*LAVRGA
Trigger: AGCCCCACGAACTGCTAAGCAACCCCACCTCCTAAA...TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAGCTATGAGACATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR GCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTGTCCTGCACTCCTTGTaGTCCTTCCTCCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFVLHSL*SFLPQT
Trigger: GGTCTGAGGGAGGAAGGAGCACAAGGAGTGCAGGAC...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCTTCTCTCACTGAGTTaGTGGAAAGATCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPLLSLS*WKDQVA
Trigger: TGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAGTGCAGGAGGGCCGGTaGCAGGTTCTGATGTACACA +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKEVQEGR*QVLMYT
Trigger: TGTGTACATCAGAACCTGCCACCGGCCCTCCTGCAC...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TTTATGTCTCATAGCTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGAGCACTGGTGAAGGGCTaGGTCATGGATTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FMSHSSGVWEVCNQCTSRALVKG*VMDFLL
Trigger: CAACAGGAAATCCATGACCCAGCCCTTCACCAGTGC...TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAGCTATGAGACATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGCACTGGTGAAGGGCTaGGTCATGGATTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCALVKG*VMDFLL
Trigger: CAACAGGAAATCCATGACCCAGCCCTTCACCAGTGC...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCGCTGAATGGTGGAGCTaGGATTTGAACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAAEWWS*DLNPCS
Trigger: GCTGCATGGGTTCAAATCCCAGCTCCACCATTCAGC...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCGTGGGGCTGGGAATCTaGTCCCTGAATCCATACTCA +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAVGLGI*SLNPYS
Trigger: TGAGTATGGATTCAGGGACCAGATTCCCAGCCCCAC...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTCTGGTCGCGAACTCCTaGTCTCAAGCCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFLVANS*SQAILL
Trigger: CAGGAGGATGGCTTGAGACCAGGAGTTCGCGACCAG...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS-3UTR TCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCAGTGTCCTGCACTCATaGAAGTGTCCTGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFASVLHS*KCPALL
Trigger: AAGGAGTGCAGGACACTTTCATGAGTGCAGGACACT...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTAGTGTCCTGCACTCATaGAAGTGTCCTGCACTCCTT +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCSVLHS*KCPALL
Trigger: AAGGAGTGCAGGACACTTTCATGAGTGCAGGACACT...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp TGTTCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGAGGATCCCATCTCTATaGAGTTCATGCAGTTATGAA +
Preference number: 4 (lower is better)
Translates to: CSHVVEGARQLSRASFIRRIPSL*SSCSYE
Trigger: TTCATAACTGCATGAACTTCATAGAGATGGGATCCT...CCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR GCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCTCATGGATTTCCTGTTaGAGAGGTACCCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFASWISC*RGTPHS
Trigger: GCTGTGAGGGGTACCTCTGCAACAGGAAATCCATGA...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCCAGAGGGACAGGAGTaGAATTCTTACTTTAACATC +
Preference number: 4 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPPEGQE*NSYFNI
Trigger: GATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCACAAGTGTGAGCCACTaGGCCTTGTCTTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFATSVSH*ALSCFS
Trigger: AGAGAAGCAAGACAAGGCGCAGTGGCTCACACTTGT...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS-3UTR CCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGCTGCAGGCTGAATGGTaGAGCTGGGATTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRLQAEW*SWDLNP
Trigger: TGGGTTCAAATCCCAGCTCCACCATTCAGCCTGCAG...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTGCTGAATGCTGGAGCTaGGATTTGAACCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFAECWS*DLNPCS
Trigger: GCTGCATGGGTTCAAATCCCAGCTCCAGCATTCAGC...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAATTGCTTAGCAGTTCGTaGGGCTGGGAATCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKELLSSS*GWESGP
Trigger: GGGACCAGATTCCCAGCCCCACGAACTGCTAAGCAA...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGGCATGTGAAAGAACATaGTCAAGCATGTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMACERT*SSMCTE
Trigger: CTCTGTGCACATGCTTGACCATGTTCTTTCACATGC...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTTGCTGCTATTGCAGCTaGTCACAGCTGTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCCCYCS*SQLCLS
Trigger: AGACAGACACAGCTGTGACCAGCTGCAATAGCAGCA...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR TCA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTTTTTGCTTCTCTCACTaGGTTGCTGGAAAGATCAAG +
Preference number: 4 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAFCFSH*VAGKIK
Trigger: CTTGATCTTTCCAGCAACTCAGTGAGAGAAGCAAAA...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTAGCTGTGATCAGAATTaGTCTTCATCGGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFSCDQN*SSSGHD
Trigger: GTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCT...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TTTATGTCTCATAGCTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGATTGCTTATAGGCACCTaGTGGCTGTGTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: FMSHSSGVWEVCNQCTSRLLIGT*WLCSHV
Trigger: CACATGAGAACACAGCCAGCAGGTGCCTATAAGCAA...TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAGCTATGAGACATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTTCTCTGCAGGCTGAATaGTGGAGCTGGGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFSLQAE*WSWDLN
Trigger: GTTCAAATCCCAGCTCCACCATTCAGCCTGCAGAGA...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGTCTCTGCAGGCTGAATaGTGGAGCTGGGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRSLQAE*WSWDLN
Trigger: GTTCAAATCCCAGCTCCACCATTCAGCCTGCAGAGA...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTGTGGGGCTGGGAATCTaGTCCCTGAATCCATACTCA +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFVGLGI*SLNPYS
Trigger: TGAGTATGGATTCAGGGACCAGATTCCCAGCCCCAC...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCCATGTGTTTAGGAGGTaGGGTTGCTTAGCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAHVFRR*GCLAVR
Trigger: ACGAACTGCTAAGCAACCCCACCTCCTAAACACATG...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR CAA 72 bp CACAAGCTCAACCAAGTGCTTTTGCCTCTCAGTTTGTaGACCTGTGACTTAGGGCTTATGACAAGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: HKLNQVLLPLSL*TCDLGLMTSSP
Trigger: TGGGCTACTTGTCATAAGCCCTAAGTCACAGGTCAACAAACTGAGAGGCAAAAGCACTTGGTTGAGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAATGGTCTCTGTAGGCTaGATGCTGGAGCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKEMVSVG*MLELGF
Trigger: AAATCCCAGCTCCAGCATTCAGCCTACAGAGACCAT...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp CTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCTCATGTTCACTGCAACTACTGTaGAGTAGTTCTTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: LVRTHFLAYRHLLAVFSCSLQLL*SSSCHV
Trigger: AACATGACAAGAACTACTTCACAGTAGTTGCAGTGA...ACATGAGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR GCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAATGGGATTTGAACCCATaGAGCTTAGCTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKEWDLNP*SLAPEP
Trigger: AGGCTCTGGAGCTAAGCTGCATGGGTTCAAATCCCA...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp CTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCTCATGTTCGTTGAATCCTCACTaGAACTACTGTGAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LVRTHFLAYRHLLAVFSCSLNPH*NYCEVV
Trigger: AACTACTTCACAGTAGTTGCAGTGAGGATTCAACGA...ACATGAGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGGGCATACTGCTTATTaGGCTTCTCATGATGACACT +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCGHTAY*ASHDDT
Trigger: AGTGTCATCATGAGAAGCCCAATAAGCAGTATGCCC...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CCA 90 bp TTTATGTCTCATAGCTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGAGCATGTGAAAGAACATaGTCAAGCATGTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: FMSHSSGVWEVCNQCTSRACERT*SSMCTE
Trigger: CTCTGTGCACATGCTTGACCATGTTCTTTCACATGC...TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAGCTATGAGACATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAACTTATAGGCACCTGCTaGCTGTGTTCTCATGTGGTG +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKELIGTC*LCSHVV
Trigger: CACCACATGAGAACACAGCCAGCAGGTGCCTATAAG...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTGAACCCAAGAATCACTaGGATGCGCAAAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFEPKNH*DAQSGS
Trigger: TGATCCGCTTTGCGCATCCCAGTGATTCTTGGGTTC...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS-3UTR TCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTCCTCCACCTTATAGGTaGGAAAATATTGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFPPPYR*ENIGTE
Trigger: CTCTGTGCCAATATTTTCTCACCTATAAGGTGGAGG...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTGATTTTGCTCAAGGGTaGATTCCTCCAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFDFAQG*IPPGSL
Trigger: AAGACTTCCTGGAGGAATTCACCCTTGAGCAAAATC...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGCAGGGACTGAGAAATTaGCAACTGTCATTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRQGLRN*QLSFCH
Trigger: ATGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTG...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTCCAGAGGGACAGGAGTaGAATTCTTACTTTAACATC +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCPEGQE*NSYFNI
Trigger: GATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGG...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR GCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCCCTCCTGCTTCTTTTTaGCAGCTACTATTGATCCTT +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAPPASF*QLLLIL
Trigger: AAGGATCAATAGTAGCTGGCAAAAAGAAGCAGGAGG...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTTATGAAAGTGTCCTaGACTCATGAAAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCVMKVS*THESVL
Trigger: CAGGACACTTTCATGAGTGCAGGACACTTTCATAAC...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
3UTR CAA 72 bp ATACACAAGCTCAACCAAGTGCTTTTGCCTCTCAGTTaGTTGACCTGTGACTTAGGGCTTATGACAAGTAGC +
Preference number: 4 (lower is better)
Translates to: IHKLNQVLLPLS*LTCDLGLMTSS
Trigger: GCTACTTGTCATAAGCCCTAAGTCACAGGTCAACAAACTGAGAGGCAAAAGCACTTGGTTGAGCTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAGATGTACACAGGGACTaGGAAATTGCCAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKEDVHRD*EIANCH
Trigger: ATGACAGTTGGCAATTTCTCAGTCCCTGTGTACATC...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAACCTCCACCTTATAGGTaGGAAAATATTGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKEPPPYR*ENIGTE
Trigger: CTCTGTGCCAATATTTTCTCACCTATAAGGTGGAGG...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTTCACTGCAACTACTGTaGAGTAGTTCTTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCSLQLL*SSSCHV
Trigger: AACATGACAAGAACTACTTCACAGTAGTTGCAGTGA...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCAGGATCCCATCTCTATaGAGTTCATGCAGTTATGAA +
Preference number: 4 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFARIPSL*SSCSYE
Trigger: TTCATAACTGCATGAACTTCATAGAGATGGGATCCT...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR GCA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAACTTCTCTCACTGAGTTaGTGGAAAGATCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: ASLTELLERSSGKKHVKELLSLS*WKDQVA
Trigger: TGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAG...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTTCACTGCAACTACTGTaGAGTAGTTCTTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFSLQLL*SSSCHV
Trigger: AACATGACAAGAACTACTTCACAGTAGTTGCAGTGA...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR TCA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTAAATGTTCATCTCGTTaGATCCTCACTGCAACTACT +
Preference number: 4 (lower is better)
Translates to: NLVPESILTRYTSSTKCFKCSSR*ILTATT
Trigger: AGTAGTTGCAGTGAGGATTCAACGAGATGAACATTT...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS CCA 90 bp GGTCCAGCAGCCCTTCCGCACCAGGGTCACCGGCGCGCGATACCCTaGGGGCGGGATCGGGGCTCGTGCTCTGCTTCCCGAAACCCTTCT +
Preference number: 5 (lower is better)
Translates to: GPAALPHQGHRRAIP*GRDRGSCSASRNPS
Trigger: AGAAGGGTTTCGGGAAGCAGAGCACGAGCCCCGATCCCGCCCCCAGGGTATCGCGCGCCGGTGACCCTGGTGCGGAAGGGCTGCTGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601224.1
CDS CCA 90 bp GCGGGTCGGGTGCTGGCAAGAGAGCGTAGATGCACACTCAGGCAGTaGTACCCTGGCACAGTCGTGCGGGCTGCGCACTGCGCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: AGRVLARERRCTLRQ*YPGTVVRAAHCARA
Trigger: GGCTCTGGCGCAGTGCGCAGCCCGCACGACTGTGCCAGGGTACCACTGCCTGAGTGTGCATCTACGCTCTCTTGCCAGCACCCGACCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595666.1
CDS-3UTR CAA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTCGCGTCCGCGTTCGATaGCGTCTGGCCCGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLARVRVR*RLARRR
Trigger: CCTCCTGCGGGCCAGACGCAATCGAACGCGGACGCG...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS GCA 90 bp TCACCGGCGCGCGATACCCTGGGGGCGGGATCGGGGCTCGTGCTCTaGTTCCCGAAACCCTTCTCCCTCCAGTCTCAGCGTTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SPARDTLGAGSGLVL*FPKPFSLQSQRSSS
Trigger: GGAGGAAGAACGCTGAGACTGGAGGGAGAAGGGTTTCGGGAAGCAGAGCACGAGCCCCGATCCCGCCCCCAGGGTATCGCGCGCCGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601224.1
CDS GCA 90 bp CAGGGTCACCGGCGCGCGATACCCTGGGGGCGGGATCGGGGCTCGTaGTCTGCTTCCCGAAACCCTTCTCCCTCCAGTCTCAGCGTTCTT +
Preference number: 5 (lower is better)
Translates to: QGHRRAIPWGRDRGS*SASRNPSPSSLSVL
Trigger: AAGAACGCTGAGACTGGAGGGAGAAGGGTTTCGGGAAGCAGAGCACGAGCCCCGATCCCGCCCCCAGGGTATCGCGCGCCGGTGACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601224.1
CDS GCA 90 bp GGCTGCTCGCATTCGCCTCATTGCTTCTCCCACCCTTACCCGCACTaGCGACTGGGGCATGAGTCCGCAACGCCCTCTGCGCCTCGCCCT +
Preference number: 5 (lower is better)
Translates to: GCSHSPHCFSHPYPH*RLGHESATPSAPRP
Trigger: AGGGCGAGGCGCAGAGGGCGTTGCGGACTCATGCCCCAGTCGGCAGTGCGGGTAAGGGTGGGAGAAGCAATGAGGCGAATGCGAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594049.5
CDS CCA 90 bp GGCGTTGCATTTGTCAGTTGTGCAGCCGCGCACCACCGAGTAGTCTaGCGGCAGCGCGTCCGCGTTCGATTGCGTCTGGCCCGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GVAFVSCAAAHHRVV*RQRVRVRLRLARRR
Trigger: CCTCCTGCGGGCCAGACGCAATCGAACGCGGACGCGCTGCCGCCAGACTACTCGGTGGTGCGCGGCTGCACAACTGACAAATGCAACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000601224.1
ENST00000602179.1
ENST00000651184.1
CDS CCA 90 bp ACAGGCGTAGCACTCGGCGCCGCTGAGCGTCGGCGGGTCGGGTGCTaGCAAGAGAGCGTAGATGCACACTCAGGCAGTGGTACCCTGGCA +
Preference number: 5 (lower is better)
Translates to: TGVALGAAERRRVGC*QESVDAHSGSGTLA
Trigger: TGCCAGGGTACCACTGCCTGAGTGTGCATCTACGCTCTCTTGCCAGCACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCTACGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595666.1
CDS-3UTR CAA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTCGCGTCCGCGTTCGATaGCGTCTGGCCCGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGRVRVR*RLARRR
Trigger: CCTCCTGCGGGCCAGACGCAATCGAACGCGGACGCG...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGGTAGCACTGCAGGGCTaGGGACCCCGCACTGCCGAC +
Preference number: 5 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVVALQG*GPRTAD
Trigger: GTCGGCAGTGCGGGGTCCCAAGCCCTGCAGTGCTAC...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS TCA 90 bp AGTCATCCTGGTGGACCCCGATACAGGCGTAGCACTCGGCGCCGCTaGGCGTCGGCGGGTCGGGTGCTGGCAAGAGAGCGTAGATGCACA +
Preference number: 5 (lower is better)
Translates to: SHPGGPRYRRSTRRR*ASAGRVLARERRCT
Trigger: TGTGCATCTACGCTCTCTTGCCAGCACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCTACGCCTGTATCGGGGTCCACCAGGATGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595666.1
CDS GCA 90 bp GATACAGGCGTAGCACTCGGCGCCGCTGAGCGTCGGCGGGTCGGGTaGTGGCAAGAGAGCGTAGATGCACACTCAGGCAGTGGTACCCTG +
Preference number: 5 (lower is better)
Translates to: DTGVALGAAERRRVG*WQESVDAHSGSGTL
Trigger: CAGGGTACCACTGCCTGAGTGTGCATCTACGCTCTCTTGCCAGCACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCTACGCCTGTATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595666.1
CDS CCA 90 bp CGCATTCGCCTCATTGCTTCTCCCACCCTTACCCGCACTGCCGACTaGGGCATGAGTCCGCAACGCCCTCTGCGCCTCGCCCTGCTTCGA +
Preference number: 5 (lower is better)
Translates to: RIRLIASPTLTRTAD*GMSPQRPLRLALLR
Trigger: TCGAAGCAGGGCGAGGCGCAGAGGGCGTTGCGGACTCATGCCCCAGTCGGCAGTGCGGGTAAGGGTGGGAGAAGCAATGAGGCGAATGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594049.5
CDS-3UTR CAA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCTCTGGGGACCCCCATaGCCATTGCTGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVLWGPP*PLLSWA
Trigger: GGCCCAGCTCAGCAATGGCAATGGGGGTCCCCAGAG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CAA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCGGCGGGTCGGGTGCTaGGCTCAGGTTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VQFLPVLLARLWGTRAGERRVGC*AQVGEG
Trigger: GCCCTCCCCAACCTGAGCCAAGCACCCGACCCGCCG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGCGGCGGGTCGGGTGCTaGGCTCAGGTTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VSSFFQYCWPGCGAQGRERRVGC*AQVGEG
Trigger: GCCCTCCCCAACCTGAGCCAAGCACCCGACCCGCCG...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS TCA 90 bp GCGGGTCGGGTGCTTGGCTCAGGTTGGGGAGGGCGTCATGAGTCATaGGGTGGGCGTTGCATTTGTCAGTTGTGCAGCCGCGCACCACCG +
Preference number: 5 (lower is better)
Translates to: AGRVLGSGWGGRHES*GGRCICQLCSRAPP
Trigger: CGGTGGTGCGCGGCTGCACAACTGACAAATGCAACGCCCACCTCATGACTCATGACGCCCTCCCCAACCTGAGCCAAGCACCCGACCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000601224.1
ENST00000602179.1
ENST00000651184.1
CDS TCA 90 bp AGCGTCGGCGGGTCGGGTGCTTGGCTCAGGTTGGGGAGGGCGTCATaGGTCATGAGGTGGGCGTTGCATTTGTCAGTTGTGCAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: SVGGSGAWLRLGRAS*VMRWALHLSVVQPR
Trigger: GCGCGGCTGCACAACTGACAAATGCAACGCCCACCTCATGACTCATGACGCCCTCCCCAACCTGAGCCAAGCACCCGACCCGCCGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000601224.1
ENST00000602179.1
ENST00000651184.1
CDS TCA 90 bp CAGGCACACGGGCCTGGCCCCTCTGCTCCCAGGGAAGACACGCCTTaGGAGACCAGGTGCTGCTATTGCAGCTGGTCACAGCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: QAHGPGPSAPREDTP*ETRCCYCSWSQLCL
Trigger: CAGACACAGCTGTGACCAGCTGCAATAGCAGCACCTGGTCTCTCAAGGCGTGTCTTCCCTGGGAGCAGAGGGGCCAGGCCCGTGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS GCA 90 bp CCCAGCCACACTGTCGCCTTCTTCGGCTGCTCGCATTCGCCTCATTaGTTCTCCCACCCTTACCCGCACTGCCGACTGGGGCATGAGTCC +
Preference number: 5 (lower is better)
Translates to: PSHTVAFFGCSHSPH*FSHPYPHCRLGHES
Trigger: GGACTCATGCCCCAGTCGGCAGTGCGGGTAAGGGTGGGAGAAGCAATGAGGCGAATGCGAGCAGCCGAAGAAGGCGACAGTGTGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594049.5
CDS GCA 90 bp CACTGCAGGGCTTGGGACCCCAGCCACACTGTCGCCTTCTTCGGCTaGTCGCATTCGCCTCATTGCTTCTCCCACCCTTACCCGCACTGC +
Preference number: 5 (lower is better)
Translates to: HCRAWDPSHTVAFFG*SHSPHCFSHPYPHC
Trigger: GCAGTGCGGGTAAGGGTGGGAGAAGCAATGAGGCGAATGCGAGCAGCCGAAGAAGGCGACAGTGTGGCTGGGGTCCCAAGCCCTGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594049.5
CDS CCA 90 bp CCAGGAACTCAGAGCTCCACCCAGCAAATGACAGGCACACGGGCCTaGCCCCTCTGCTCCCAGGGAAGACACGCCTTGAGAGACCAGGTG +
Preference number: 5 (lower is better)
Translates to: PGTQSSTQQMTGTRA*PLCSQGRHALRDQV
Trigger: CACCTGGTCTCTCAAGGCGTGTCTTCCCTGGGAGCAGAGGGGCCAGGCCCGTGTGCCTGTCATTTGCTGGGTGGAGCTCTGAGTTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR CAA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGGTAGCACTGCAGGGCTaGGGACCCCGCACTGCCGAC +
Preference number: 5 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREVALQG*GPRTAD
Trigger: GTCGGCAGTGCGGGGTCCCAAGCCCTGCAGTGCTAC...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS GCA 90 bp CAGAGCTCCACCCAGCAAATGACAGGCACACGGGCCTGGCCCCTCTaGTCCCAGGGAAGACACGCCTTGAGAGACCAGGTGCTGCTATTG +
Preference number: 5 (lower is better)
Translates to: QSSTQQMTGTRAWPL*SQGRHALRDQVLLL
Trigger: CAATAGCAGCACCTGGTCTCTCAAGGCGTGTCTTCCCTGGGAGCAGAGGGGCCAGGCCCGTGTGCCTGTCATTTGCTGGGTGGAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS-3UTR CAA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACCGCGTCCGCGTTCGATaGCGTCTGGCCCGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TSLYSSLLELRQALEGEHRVRVR*RLARRR
Trigger: CCTCCTGCGGGCCAGACGCAATCGAACGCGGACGCG...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTACTGTCATTCTGCCATaGCCCTGGAAGCAGGCGGTC +
Preference number: 5 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLATVILP*PWKQAV
Trigger: GACCGCCTGCTTCCAGGGCAATGGCAGAATGACAGT...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGCAGGGAAGACACGCCTaGAGAGACCAGGTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVQGRHA*RDQVLL
Trigger: TAGCAGCACCTGGTCTCTCAAGGCGTGTCTTCCCTG...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS TCA 90 bp ACTGTCATTCTGCCATTGCCCTGGAAGCAGGCGGTCTGGTCCTGGTaGCACTGGACTCGTCGGGACCTGCCGATAGCGCAGTCATCCTGG +
Preference number: 5 (lower is better)
Translates to: TVILPLPWKQAVWSW*HWTRRDLPIAQSSW
Trigger: CCAGGATGACTGCGCTATCGGCAGGTCCCGACGAGTCCAGTGTCACCAGGACCAGACCGCCTGCTTCCAGGGCAATGGCAGAATGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000595666.1
ENST00000601224.1
ENST00000651184.1
CDS-3UTR CAA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGGTAGCACTGCAGGGCTaGGGACCCTGTCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEVALQG*GPCQAE
Trigger: CTCTGCCTGACAGGGTCCCAAGCCCTGCAGTGCTAC...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CAA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGGTACTGTTGGCCAGGTaGTGGGGCACAAGGGCGGGA +
Preference number: 5 (lower is better)
Translates to: VSSFFQYCWPGCGAQGREVLLAR*WGTRAG
Trigger: TCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTAC...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCACGACATGGCTGTTTaGCCCTCCCCGGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: VQFLPVLLARLWGTRAGEHDMAV*PSPGML
Trigger: CAGCATCCCCGGGGAGGGCAAAACAGCCATGTCGTG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTAGTGTCCTGCACTCCTaGTGCTCCTTCCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGSVLHS*CSFLPQ
Trigger: CTGAGGGAGGAAGGAGCACAAGGAGTGCAGGACACT...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGCGTTGCATTTGTCAGTaGTGCAGCCGCGCACCACCG +
Preference number: 5 (lower is better)
Translates to: VQFLPVLLARLWGTRAGERCICQ*CSRAPP
Trigger: CGGTGGTGCGCGGCTGCACAACTGACAAATGCAACG...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGAGGTGGGCGTTGCATTaGTCAGTTGTGCAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: VQFLPVLLARLWGTRAGERWALH*SVVQPR
Trigger: GCGCGGCTGCACAACTGACAAATGCAACGCCCACCT...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGTCATGAGGTGGGCGTaGCATTTGTCAGTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAVMRWA*HLSVVQ
Trigger: CTGCACAACTGACAAATGCAACGCCCACCTCATGAC...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGTCATGGATTTCCTGTaGCAGAGGTACCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAVMDFL*QRYPSQ
Trigger: CTGTGAGGGGTACCTCTGCAACAGGAAATCCATGAC...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp TCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTTGCTGGAGCTGGGATTaGAACCCATGCAGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: SGGRAQEAVLWGAWCLAGCWSWD*NPCSLA
Trigger: AGCTAAGCTGCATGGGTTCAAATCCCAGCTCCAGCA...ACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GGCTCTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGCTTCTCTCACTGAGTaGCTGGAAAGATCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: GSGGRAQEAVLWGAWCLAASLTE*LERSSG
Trigger: GCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC...AGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS CCA 90 bp CTTCGATGTCTCCTTCCGAAACTACACGCGGAACCCAAGAATCACTaGGATGCGCAAAGCGGATCAGGAGCGCACGCTCATTCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LRCLLPKLHAEPKNH*DAQSGSGAHAHSAQ
Trigger: CTGGGCCGAATGAGCGTGCGCTCCTGATCCGCTTTGCGCATCCCAGTGATTCTTGGGTTCCGCGTGTAGTTTCGGAAGGAGACATCGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS-3UTR CAA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTCGGCGGGTCGGGTGCTaGGCTCAGGTTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCRRVGC*AQVGEG
Trigger: GCCCTCCCCAACCTGAGCCAAGCACCCGACCCGCCG...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCACTGTCATTCTGCCATaGCCCTGGAAGCAGGCGGTC +
Preference number: 5 (lower is better)
Translates to: VIGAEAARMRCVSPVPSITVILP*PWKQAV
Trigger: GACCGCCTGCTTCCAGGGCAATGGCAGAATGACAGT...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp CTGGAGGGAGAGCACAGGAAGCCGTGTTATGGGGTGCCTGGTGCCTGGCTGGTGTTGCCTCTCAGTTTGTaGACCTGTGACTTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: LEGEHRKPCYGVPGAWLVLPLSL*TCDLGL
Trigger: AAGCCCTAAGTCACAGGTCAACAAACTGAGAGGCAA...CACCAGCCAGGCACCAGGCACCCCATAACACGGCTTCCTGTGCTCTCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCACTGTCATTCTGCCATaGCCCTGGAAGCAGGCGGTC +
Preference number: 5 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPTVILP*PWKQAV
Trigger: GACCGCCTGCTTCCAGGGCAATGGCAGAATGACAGT...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCGTACTGTTGGCCAGGTaGTGGGGCACAAGGGCGGGA +
Preference number: 5 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPVLLAR*WGTRAG
Trigger: TCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTAC...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCACGACATGGCTGTTTaGCCCTCCCCGGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPHDMAV*PSPGML
Trigger: CAGCATCCCCGGGGAGGGCAAAACAGCCATGTCGTG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACAGTGTCCTGCACTCCTaGTGCTCCTTCCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: TSLYSSLLELRQALEGEHSVLHS*CSFLPQ
Trigger: CTGAGGGAGGAAGGAGCACAAGGAGTGCAGGACACT...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCGTTGCATTTGTCAGTaGTGCAGCCGCGCACCACCG +
Preference number: 5 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPRCICQ*CSRAPP
Trigger: CGGTGGTGCGCGGCTGCACAACTGACAAATGCAACG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCGTCATGAGGTGGGCGTaGCATTTGTCAGTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIVMRWA*HLSVVQ
Trigger: CTGCACAACTGACAAATGCAACGCCCACCTCATGAC...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp TGTTCTCATGTGGTGGAAGGGGCAAGGCAGCTCTCCAGGGCCTCTTTTATAAGGACTGTCATTCTGCCATaGCCCTGGAAGCAGGCGGTC +
Preference number: 5 (lower is better)
Translates to: CSHVVEGARQLSRASFIRTVILP*PWKQAV
Trigger: GACCGCCTGCTTCCAGGGCAATGGCAGAATGACAGT...CCTTATAAAAGAGGCCCTGGAGAGCTGCCTTGCCCCTTCCACCACATGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CAA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCTGCTGGAGCTGGGATTaGAACCCATGCAGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: VIGAEAARMRCVSPVPSICWSWD*NPCSLA
Trigger: AGCTAAGCTGCATGGGTTCAAATCCCAGCTCCAGCA...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GTGTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGACAGGGACTGAGAAATaGCCAACTGTCATTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VSSFFQYCWPGCGAQGRETGTEK*PTVILP
Trigger: TGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTGT...CTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GTCCAGTTTCTTCCAGTACTGTTGGCCAGGTTGTGGGGCACAAGGGCGGGAGAGACAGGGACTGAGAAATaGCCAACTGTCATTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VQFLPVLLARLWGTRAGETGTEK*PTVILP
Trigger: TGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTGT...CTCTCCCGCCCTTGTGCCCCACAACCTGGCCAACAGTACTGGAAGAAACTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACGTCATGGATTTCCTGTaGCAGAGGTACCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: TSLYSSLLELRQALEGEHVMDFL*QRYPSQ
Trigger: CTGTGAGGGGTACCTCTGCAACAGGAAATCCATGAC...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACTGCTGGAGCTGGGATTaGAACCCATGCAGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: TSLYSSLLELRQALEGEHCWSWD*NPCSLA
Trigger: AGCTAAGCTGCATGGGTTCAAATCCCAGCTCCAGCA...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCCTTTTGCCTCTCAGTTaGTTGACCTGTGACTTAGGG +
Preference number: 5 (lower is better)
Translates to: VIGAEAARMRCVSPVPSILLPLS*LTCDLG
Trigger: CCCTAAGTCACAGGTCAACAAACTGAGAGGCAAAAG...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp TTTATGTCTCATAGCTCTGGAGTCTGGGAAGTCTGCAATCAATGCACCAGCAGACGTTGCATTTGTCAGTaGTGCAGCCGCGCACCACCG +
Preference number: 5 (lower is better)
Translates to: FMSHSSGVWEVCNQCTSRRCICQ*CSRAPP
Trigger: CGGTGGTGCGCGGCTGCACAACTGACAAATGCAACG...TCTGCTGGTGCATTGATTGCAGACTTCCCAGACTCCAGAGCTATGAGACATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CAA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCACAGGGACTGAGAAATaGCCAACTGTCATTCTGCCA +
Preference number: 5 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPTGTEK*PTVILP
Trigger: TGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTGT...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGCACGACATGGCTGTTTaGCCCTCCCCGGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRHDMAV*PSPGML
Trigger: CAGCATCCCCGGGGAGGGCAAAACAGCCATGTCGTG...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCTCCCCTCAACCAAGTGCTTTaGCCTCTCAGTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: AVIRIALHRGTTWLFCPPLNQVL*PLSLLT
Trigger: GGTCAACAAACTGAGAGGCAAAAGCACTTGGTTGAG...GGGAGGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTCGTTGCATTTGTCAGTaGTGCAGCCGCGCACCACCG +
Preference number: 5 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFRCICQ*CSRAPP
Trigger: CGGTGGTGCGCGGCTGCACAACTGACAAATGCAACG...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GGAGAGATGGAAGGCCAGAGGGACAGGAGTGCAATTCTTACTTTAACATCATTTAGGTGGGCGTTGCATTaGTCAGTTGTGCAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: GEMEGQRDRSAILTLTSFRWALH*SVVQPR
Trigger: GCGCGGCTGCACAACTGACAAATGCAACGCCCACCT...AAATGATGTTAAAGTAAGAATTGCACTCCTGTCCCTCTGGCCTTCCATCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGTGGTGGAGCTGGGATTaGAACCCATGCAGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMWWSWD*NPCSLA
Trigger: AGCTAAGCTGCATGGGTTCAAATCCCAGCTCCACCA...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp GTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTGTGAGCCCTGTCCCCAGCATCATAGGTGAGAAAATATaGGCACAGAGAGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: VIGAEAARMRCVSPVPSIIGEKI*AQRAQV
Trigger: TACTTGAGCTCTCTGTGCCAATATTTTCTCACCTAT...GATGCTGGGGACAGGGCTCACACACCTCATTCTTGCTGCTTCAGCCCCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp AACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGTTTTGCCCCTTTTGCCTCTCAGTTaGTTGACCTGTGACTTAGGG +
Preference number: 5 (lower is better)
Translates to: NSCDQNCSSSGHDMAVLPLLPLS*LTCDLG
Trigger: CCCTAAGTCACAGGTCAACAAACTGAGAGGCAAAAG...GGGCAAAACAGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GCAGCTCTCCAGGGCCTCTTTTATAAGGGCACTAATCCTATTCATGGGGGCTCCCCTGATCTTTATAGCTaGGAGAATTTCACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: AALQGLFYKGTNPIHGGSPDLYS*ENFTSL
Trigger: CAGCGAGGTGAAATTCTCCAAGCTATAAAGATCAGG...GGAGCCCCCATGAATAGGATTAGTGCCCTTATAAAAGAGGCCCTGGAGAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CAA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTGCTTCTCTCACTGAGTaGCTGGAAAGATCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAASLTE*LERSSG
Trigger: GCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTCCACTGCGCCTTGTCTaGCTTCTCTGTTTCTATCTC +
Preference number: 5 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAPLRLV*LLCFYL
Trigger: GAGATAGAAACAGAGAAGCAAGACAAGGCGCAGTGG...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS-3UTR CAA 90 bp CTGGTGAGAACCCACTTTCTTGCTTATAGGCACCTGCTGGCTGTGTTCTCATGTACAGGGACTGAGAAATaGCCAACTGTCATTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LVRTHFLAYRHLLAVFSCTGTEK*PTVILP
Trigger: TGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTGT...ACATGAGAACACAGCCAGCAGGTGCCTATAAGCAAGAAAGTGGGTTCTCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377950.8
CDS-3UTR CAA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCGTCATGGATTTCCTGTaGCAGAGGTACCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAVMDFL*QRYPSQ
Trigger: CTGTGAGGGGTACCTCTGCAACAGGAAATCCATGAC...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTTGGTGGAGCTGGGATTaGAACCCATGCAGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCWWSWD*NPCSLA
Trigger: AGCTAAGCTGCATGGGTTCAAATCCCAGCTCCACCA...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000651184.1
CDS-3UTR CAA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCTGCTGGAGCTGGGATTaGAACCCATGCAGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFACWSWD*NPCSLA
Trigger: AGCTAAGCTGCATGGGTTCAAATCCCAGCTCCAGCA...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp ACATCATTGTATAGCTCCCTCCTAGAGCTGCGACAGGCTCTGGAGGGAGAGCACATAGGTGAGAAAATATaGGCACAGAGAGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: TSLYSSLLELRQALEGEHIGEKI*AQRAQV
Trigger: TACTTGAGCTCTCTGTGCCAATATTTTCTCACCTAT...GTGCTCTCCCTCCAGAGCCTGTCGCAGCTCTAGGAGGGAGCTATACAATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGCTTTTGCCTCTCAGTTaGTTGACCTGTGACTTAGGG +
Preference number: 5 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMLLPLS*LTCDLG
Trigger: CCCTAAGTCACAGGTCAACAAACTGAGAGGCAAAAG...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGCTCAACCAAGTGCTTTaGCCTCTCAGTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMLNQVL*PLSLLT
Trigger: GGTCAACAAACTGAGAGGCAAAAGCACTTGGTTGAG...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGGTCATGAGGTGGGCGTaGCATTTGTCAGTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRVMRWA*HLSVVQ
Trigger: CTGCACAACTGACAAATGCAACGCCCACCTCATGAC...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp TCAGTGAGTAACAGCTGTGATCAGAATTGCTCTTCATCGGGGCACGACATGGCTCCTGATCTTTATAGCTaGGAGAATTTCACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SVSNSCDQNCSSSGHDMAPDLYS*ENFTSL
Trigger: CAGCGAGGTGAAATTCTCCAAGCTATAAAGATCAGG...AGCCATGTCGTGCCCCGATGAAGAGCAATTCTGATCACAGCTGTTACTCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GATTTGAACCCATGCAGCTTAGCTCCAGAGCCTGGCTTAAGTAACTCACCCATGTCCTCCTGCTTCTTTTaGCCAGCTACTATTGATCCT +
Preference number: 5 (lower is better)
Translates to: DLNPCSLAPEPGLSNSPMSSCFF*PATIDP
Trigger: AGGATCAATAGTAGCTGGCAAAAAGAAGCAGGAGGA...CATGGGTGAGTTACTTAAGCCAGGCTCTGGAGCTAAGCTGCATGGGTTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCGCTTCTCTCACTGAGTaGCTGGAAAGATCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAASLTE*LERSSG
Trigger: GCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAAGTCATGAGGTGGGCGTaGCATTTGTCAGTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: ASLTELLERSSGKKHVKEVMRWA*HLSVVQ
Trigger: CTGCACAACTGACAAATGCAACGCCCACCTCATGAC...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGGTGGAGCTGGGATTaGAACCCATGCAGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: NLVPESILTRYTSSTKCFWWSWD*NPCSLA
Trigger: AGCTAAGCTGCATGGGTTCAAATCCCAGCTCCACCA...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTTTGCCTCTCAGTTTGTaGACCTGTGACTTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCLPLSL*TCDLGL
Trigger: AAGCCCTAAGTCACAGGTCAACAAACTGAGAGGCAA...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp CATCATTTTCCAGTGAGCTATGTGATAGGGGCTGAAGCAGCAAGAATGAGGTGTCTCAACCAAGTGCTTTaGCCTCTCAGTTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: HHFPVSYVIGAEAARMRCLNQVL*PLSLLT
Trigger: GGTCAACAAACTGAGAGGCAAAAGCACTTGGTTGAG...ACACCTCATTCTTGCTGCTTCAGCCCCTATCACATAGCTCACTGGAAAATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS TCA 90 bp ATCTTCGCCTGTTCTAGACTCCAGAATGCGTTCCTTAGCGAAAGCTaGGAACCTTTTAATTCGCTCTCAGTCAACACCAAAGACCCTCAA +
Preference number: 5 (lower is better)
Translates to: IFACSRLQNAFLSES*EPFNSLSVNTKDPQ
Trigger: TTGAGGGTCTTTGGTGTTGACTGAGAGCGAATTAAAAGGTTCTCAGCTTTCGCTAAGGAACGCATTCTGGAGTCTAGAACAGGCGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599397.1
ENST00000602179.1
CDS-3UTR CAA 90 bp TGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTGCCCCTGATCTTTATAGCTaGGAGAATTTCACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: WSLNPYSLDTQAQPSAFAPDLYS*ENFTSL
Trigger: CAGCGAGGTGAAATTCTCCAAGCTATAAAGATCAGG...GGCAAAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp AATCTGGTCCCTGAATCCATACTCACTAGATACACAAGCTCAACCAAGTGCTTTTTGCCTCTCAGTTTGTaGACCTGTGACTTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: NLVPESILTRYTSSTKCFLPLSL*TCDLGL
Trigger: AAGCCCTAAGTCACAGGTCAACAAACTGAGAGGCAA...AAAGCACTTGGTTGAGCTTGTGTATCTAGTGAGTATGGATTCAGGGACCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp TTGCCAGCTACTATTGATCCTTTAGGATTTTGCTCAAGGGTGAATTCCTCCAGGTCCTCCTGCTTCTTTTaGCCAGCTACTATTGATCCT +
Preference number: 5 (lower is better)
Translates to: LPATIDPLGFCSRVNSSRSSCFF*PATIDP
Trigger: AGGATCAATAGTAGCTGGCAAAAAGAAGCAGGAGGA...CCTGGAGGAATTCACCCTTGAGCAAAATCCTAAAGGATCAATAGTAGCTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS-3UTR CAA 90 bp GCTTCTCTCACTGAGTTGCTGGAAAGATCAAGTGGCAAAAAGCATGTGAAAGAATCCTCCTGCTTCTTTTaGCCAGCTACTATTGATCCT +
Preference number: 5 (lower is better)
Translates to: ASLTELLERSSGKKHVKESSCFF*PATIDP
Trigger: AGGATCAATAGTAGCTGGCAAAAAGAAGCAGGAGGA...TTCTTTCACATGCTTTTTGCCACTTGATCTTTCCAGCAACTCAGTGAGAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000651184.1
CDS CCA 72 bp GCCCTTCCGCACCAGGGTCACCGGCGCGCGATACCCTaGGGGCGGGATCGGGGCTCGTGCTCTGCTTCCCGA +
Preference number: 6 (lower is better)
Translates to: ALPHQGHRRAIP*GRDRGSCSASR
Trigger: TCGGGAAGCAGAGCACGAGCCCCGATCCCGCCCCCAGGGTATCGCGCGCCGGTGACCCTGGTGCGGAAGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601224.1
CDS CAA 90 bp GCCGCGCACCACCGAGTAGTCTGGCGGCAGCGCGTCCGCGTTCGATaGCGTCTGGCCCGCAGGAGGCCCGGTCCAGCAGCCCTTCCGCAC +
Preference number: 6 (lower is better)
Translates to: AAHHRVVWRQRVRVR*RLARRRPGPAALPH
Trigger: GTGCGGAAGGGCTGCTGGACCGGGCCTCCTGCGGGCCAGACGCAATCGAACGCGGACGCGCTGCCGCCAGACTACTCGGTGGTGCGCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000601224.1
ENST00000602179.1
ENST00000651184.1
CDS CAA 72 bp CACCGAGTAGTCTGGCGGCAGCGCGTCCGCGTTCGATaGCGTCTGGCCCGCAGGAGGCCCGGTCCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: HRVVWRQRVRVR*RLARRRPGPAA
Trigger: GGCTGCTGGACCGGGCCTCCTGCGGGCCAGACGCAATCGAACGCGGACGCGCTGCCGCCAGACTACTCGGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000601224.1
ENST00000602179.1
ENST00000651184.1
CDS TCA 72 bp GGTGGACCCCGATACAGGCGTAGCACTCGGCGCCGCTaGGCGTCGGCGGGTCGGGTGCTTGGCTCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: GGPRYRRSTRRR*ASAGRVLGSGW
Trigger: CCAACCTGAGCCAAGCACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCTACGCCTGTATCGGGGTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000601224.1
ENST00000602179.1
ENST00000651184.1
CDS TCA 72 bp TGCAGGGCTTGGGACCCCGCACTGCCGACTGGGGCATaGGTCCGCAACGCCCTCTGCGCCTCGCCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: CRAWDPALPTGA*VRNALCASPCF
Trigger: GAAGCAGGGCGAGGCGCAGAGGGCGTTGCGGACTCATGCCCCAGTCGGCAGTGCGGGGTCCCAAGCCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS TCA 72 bp GGTGGACCCCGATACAGGCGTAGCACTCGGCGCCGCTaGGCGTCGGCGGGTCGGGTGCTGGCAAGAGAGCGT +
Preference number: 6 (lower is better)
Translates to: GGPRYRRSTRRR*ASAGRVLARER
Trigger: ACGCTCTCTTGCCAGCACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCTACGCCTGTATCGGGGTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595666.1
CDS CCA 72 bp GTAGCACTGCAGGGCTTGGGACCCCGCACTGCCGACTaGGGCATGAGTCCGCAACGCCCTCTGCGCCTCGCC +
Preference number: 6 (lower is better)
Translates to: VALQGLGPRTAD*GMSPQRPLRLA
Trigger: GGCGAGGCGCAGAGGGCGTTGCGGACTCATGCCCCAGTCGGCAGTGCGGGGTCCCAAGCCCTGCAGTGCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414615.6
ENST00000651184.1
CDS GCA 72 bp CGGCGCGCGATACCCTGGGGGCGGGATCGGGGCTCGTaGTCTGCTTCCCGAAACCCTTCTCCCTCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: RRAIPWGRDRGS*SASRNPSPSSL
Trigger: GAGACTGGAGGGAGAAGGGTTTCGGGAAGCAGAGCACGAGCCCCGATCCCGCCCCCAGGGTATCGCGCGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601224.1
CDS TCA 72 bp CTTCTCCCACCCTTACCCGCACTGCCGACTGGGGCATaGGTCCGCAACGCCCTCTGCGCCTCGCCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LLPPLPALPTGA*VRNALCASPCF
Trigger: GAAGCAGGGCGAGGCGCAGAGGGCGTTGCGGACTCATGCCCCAGTCGGCAGTGCGGGTAAGGGTGGGAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594049.5
CDS CCA 72 bp GCACTCGGCGCCGCTGAGCGTCGGCGGGTCGGGTGCTaGCAAGAGAGCGTAGATGCACACTCAGGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: ALGAAERRRVGC*QESVDAHSGSG
Trigger: ACCACTGCCTGAGTGTGCATCTACGCTCTCTTGCCAGCACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595666.1
CDS GCA 72 bp GTAGCACTCGGCGCCGCTGAGCGTCGGCGGGTCGGGTaGTGGCAAGAGAGCGTAGATGCACACTCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: VALGAAERRRVG*WQESVDAHSGS
Trigger: ACTGCCTGAGTGTGCATCTACGCTCTCTTGCCAGCACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595666.1
CDS GCA 72 bp CGCGATACCCTGGGGGCGGGATCGGGGCTCGTGCTCTaGTTCCCGAAACCCTTCTCCCTCCAGTCTCAGCGT +
Preference number: 6 (lower is better)
Translates to: RDTLGAGSGLVL*FPKPFSLQSQR
Trigger: ACGCTGAGACTGGAGGGAGAAGGGTTTCGGGAAGCAGAGCACGAGCCCCGATCCCGCCCCCAGGGTATCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601224.1
CDS CCA 72 bp CTCATTGCTTCTCCCACCCTTACCCGCACTGCCGACTaGGGCATGAGTCCGCAACGCCCTCTGCGCCTCGCC +
Preference number: 6 (lower is better)
Translates to: LIASPTLTRTAD*GMSPQRPLRLA
Trigger: GGCGAGGCGCAGAGGGCGTTGCGGACTCATGCCCCAGTCGGCAGTGCGGGTAAGGGTGGGAGAAGCAATGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594049.5
CDS TCA 72 bp CTGCCATTGCCCTGGAAGCAGGCGGTCTGGTCCTGGTaGCACTGGACTCGTCGGGACCTGCCGATAGCGCAG +
Preference number: 6 (lower is better)
Translates to: LPLPWKQAVWSW*HWTRRDLPIAQ
Trigger: CTGCGCTATCGGCAGGTCCCGACGAGTCCAGTGTCACCAGGACCAGACCGCCTGCTTCCAGGGCAATGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000595666.1
ENST00000601224.1
ENST00000651184.1
CDS GCA 72 bp GCGTCGGCGGGTCGGGTGCTGGCAAGAGAGCGTAGATaGACACTCAGGCAGTGGTACCCTGGCACAGTCGTG +
Preference number: 6 (lower is better)
Translates to: ASAGRVLARERR*TLRQWYPGTVV
Trigger: CACGACTGTGCCAGGGTACCACTGCCTGAGTGTGCATCTACGCTCTCTTGCCAGCACCCGACCCGCCGACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595666.1
CDS CCA 72 bp TTTGTCAGTTGTGCAGCCGCGCACCACCGAGTAGTCTaGCGGCAGCGCGTCCGCGTTCGATTGCGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: FVSCAAAHHRVV*RQRVRVRLRLA
Trigger: GGCCAGACGCAATCGAACGCGGACGCGCTGCCGCCAGACTACTCGGTGGTGCGCGGCTGCACAACTGACAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000601224.1
ENST00000602179.1
ENST00000651184.1
CDS CCA 72 bp TTCCTGTTGCAGAGGTACCCCTCACAGCAGGAGCCCTaGAGGTCGATGGCTGTCCAGGGGCTGGTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: FLLQRYPSQQEP*RSMAVQGLVVP
Trigger: GGGCACCACCAGCCCCTGGACAGCCATCGACCTCCAGGGCTCCTGCTGTGAGGGGTACCTCTGCAACAGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000595666.1
ENST00000601224.1
ENST00000651184.1
CDS TCA 72 bp GGGCCTGGCCCCTCTGCTCCCAGGGAAGACACGCCTTaGGAGACCAGGTGCTGCTATTGCAGCTGGTCACAG +
Preference number: 6 (lower is better)
Translates to: GPGPSAPREDTP*ETRCCYCSWSQ
Trigger: CTGTGACCAGCTGCAATAGCAGCACCTGGTCTCTCAAGGCGTGTCTTCCCTGGGAGCAGAGGGGCCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS CCA 72 bp GTGCTGGCAAGAGAGCGTAGATGCACACTCAGGCAGTaGTACCCTGGCACAGTCGTGCGGGCTGCGCACTGC +
Preference number: 6 (lower is better)
Translates to: VLARERRCTLRQ*YPGTVVRAAHC
Trigger: GCAGTGCGCAGCCCGCACGACTGTGCCAGGGTACCACTGCCTGAGTGTGCATCTACGCTCTCTTGCCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595666.1
CDS CCA 72 bp CAGAGCTCCACCCAGCAAATGACAGGCACACGGGCCTaGCCCCTCTGCTCCCAGGGAAGACACGCCTTGAGA +
Preference number: 6 (lower is better)
Translates to: QSSTQQMTGTRA*PLCSQGRHALR
Trigger: TCTCAAGGCGTGTCTTCCCTGGGAGCAGAGGGGCCAGGCCCGTGTGCCTGTCATTTGCTGGGTGGAGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594013.5
CDS GCA 72 bp GCTTGGGACCCCAGCCACACTGTCGCCTTCTTCGGCTaGTCGCATTCGCCTCATTGCTTCTCCCACCCTTAC +
Preference number: 6 (lower is better)
Translates to: AWDPSHTVAFFG*SHSPHCFSHPY
Trigger: GTAAGGGTGGGAGAAGCAATGAGGCGAATGCGAGCAGCCGAAGAAGGCGACAGTGTGGCTGGGGTCCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594049.5
CDS CAA 90 bp GTGGTGGCTGAAGCACTGGTGAAGGGCTGGGTCATGGATTTCCTGTaGCAGAGGTACCCCTCACAGCAGGAGCCCTGGAGGTCGATGGCT +
Preference number: 6 (lower is better)
Translates to: VVAEALVKGWVMDFL*QRYPSQQEPWRSMA
Trigger: AGCCATCGACCTCCAGGGCTCCTGCTGTGAGGGGTACCTCTGCAACAGGAAATCCATGACCCAGCCCTTCACCAGTGCTTCAGCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000595666.1
ENST00000651184.1
CDS TCA 72 bp GTGCTTGGCTCAGGTTGGGGAGGGCGTCATGAGTCATaGGGTGGGCGTTGCATTTGTCAGTTGTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: VLGSGWGGRHES*GGRCICQLCSR
Trigger: GCGGCTGCACAACTGACAAATGCAACGCCCACCTCATGACTCATGACGCCCTCCCCAACCTGAGCCAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000601224.1
ENST00000602179.1
ENST00000651184.1
CDS GCA 72 bp TCCGAAACTACACGCGGAACCCAAGAATCACTGGGATaGGCAAAGCGGATCAGGAGCGCACGCTCATTCGGC +
Preference number: 6 (lower is better)
Translates to: SETTRGTQESLG*AKRIRSARSFG
Trigger: GCCGAATGAGCGTGCGCTCCTGATCCGCTTTGCGCATCCCAGTGATTCTTGGGTTCCGCGTGTAGTTTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS TCA 72 bp CATGAGGACAGGAGATGCTGGGCAGCTTCATGGCCCTaGGGTCAAAGGGGCCAAAGTAGGTGTGCTCAAAGC +
Preference number: 6 (lower is better)
Translates to: HEDRRCWAASWP*GQRGQSRCAQS
Trigger: GCTTTGAGCACACCTACTTTGGCCCCTTTGACCTCAGGGCCATGAAGCTGCCCAGCATCTCCTGTCCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000594049.5
ENST00000602179.1
ENST00000651184.1
CDS CCA 72 bp CTCCTTCCGAAACTACACGCGGAACCCAAGAATCACTaGGATGCGCAAAGCGGATCAGGAGCGCACGCTCAT +
Preference number: 6 (lower is better)
Translates to: LLPKLHAEPKNH*DAQSGSGAHAH
Trigger: ATGAGCGTGCGCTCCTGATCCGCTTTGCGCATCCCAGTGATTCTTGGGTTCCGCGTGTAGTTTCGGAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651184.1
CDS GCA 72 bp CAGGGACTGAGAAATTGCCAACTGTCATTCTGCCATTaGCCTGGAAGCAGGCGGTCTGGTCCTGGTGACACT +
Preference number: 6 (lower is better)
Translates to: QGLRNCQLSFCH*PGSRRSGPGDT
Trigger: AGTGTCACCAGGACCAGACCGCCTGCTTCCAGGGCAATGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377950.8
ENST00000414615.6
ENST00000594013.5
ENST00000595666.1
ENST00000601224.1
ENST00000651184.1
CDS TCA 72 bp TGTTCTAGACTCCAGAATGCGTTCCTTAGCGAAAGCTaGGAACCTTTTAATTCGCTCTCAGTCAACACCAAA +
Preference number: 6 (lower is better)
Translates to: CSRLQNAFLSES*EPFNSLSVNTK
Trigger: TTTGGTGTTGACTGAGAGCGAATTAAAAGGTTCTCAGCTTTCGCTAAGGAACGCATTCTGGAGTCTAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599397.1
ENST00000602179.1