Pregenerated sensors for LYPD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000197353Ensembl transcript IDs: ENST00000359228.4
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGGGCGCCGCGTCCCCCGCATaGTCCCGGCCCACTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GHFFKAFGAGPHRAMGVGAASPA*SRPTPL Trigger: CAGAGGAGTGGGCCGGGACCATGCGGGGGACGCGGC...GCCCACCCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGAGGGCCCCGCAGTaGAGGCTGTTCAGAGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: CRGHFFKAFGAGPHRAMGVRAPQ*RLFRAG Trigger: GCCCGCTCTGAACAGCCTCCACTGCGGGGCCCTCAC...CCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR TCA 90 bp | GGAGACTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGAGAGTGGGAGGAGCGTaGGGGCCCCGCAGTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: GDSGVLVQGALLQGIRGWRVGGA*GPRSGG Trigger: GCCTCCACTGCGGGGCCCTCACGCTCCTCCCACTCT...CCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAGTCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | CTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCCACCCCAGGCTTGCCTaGCGGGGACAGCAGACACCA | + |
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Preference number: 4 (lower is better) Translates to: LRSPGAGGTSSRHSGLGRHPRLA*RGQQTP Trigger: TGGTGTCTGCTGTCCCCGCCAGGCAAGCCTGGGGTG...GCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR TCA 90 bp | CACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGGGCGGGTGCAGGTGGCGATGGTaGCACAGTCCGACACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HFFKAFGAGPHRAMGVGGCRWRW*HSPTLL Trigger: CAGGAGTGTCGGACTGTGTCACCATCGCCACCTGCA...CCCGCCCACCCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | AGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCTCTCACCCCAGGCTTaGCTGGCGGGGACAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SPGAGGTSSRHSGLGRIGLSPQA*LAGTAD Trigger: GTCTGCTGTCCCCGCCAGGCAAGCCTGGGGTGAGAG...CCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | TCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCACGGCCCACTCCTCTGTaGTCTCACCCCAGGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SGVLVQGALLQGIRGWAARPTPL*SHPRLA Trigger: GGCAAGCCTGGGGTGAGAGCACAGAGGAGTGGGCCG...TGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | CACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGGGCGGGCGACGAGGTCAGAGATaGAGCAGGGCAGGTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: HFFKAFGAGPHRAMGVGGRRGQR*SRAGLC Trigger: GCACAGACCTGCCCTGCTGCATCTCTGACCTCGTCG...CCCGCCCACCCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | CACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGGGCGGGAGTCCGACACTCCTGTaGGCTCCGGACAGACGTAGC | + |
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Preference number: 4 (lower is better) Translates to: HFFKAFGAGPHRAMGVGGSPTLL*APDRRS Trigger: GCTACGTCTGTCCGGAGCCCACAGGAGTGTCGGACT...CCCGCCCACCCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | GGAGACTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGGCCGCATAGGGCCATaGGGGTGGGCGGGGACTCTA | + |
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Preference number: 4 (lower is better) Translates to: GDSGVLVQGALLQGIRGWGRIGP*GWAGTL Trigger: TAGAGTCCCCGCCCACCCCCATGGCCCTATGCGGCC...CCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAGTCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | ACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGGGCGGGGTGCACAGCTCAGTATTaGAGCAGGACACGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TSSRHSGLGRIGPWGWAGCTAQY*SRTRAG Trigger: CCCTGCCCGTGTCCTGCTGCAATACTGAGCTGTGCA...CCCCGCCCACCCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | CACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGGGCGGGACCGTGGAGTCCCCCTaGAAGGGGTACACTATCTCC | + |
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Preference number: 4 (lower is better) Translates to: HFFKAFGAGPHRAMGVGGTVESP*KGYTIS Trigger: GGAGATAGTGTACCCCTTCCAGGGGGACTCCACGGT...CCCGCCCACCCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGAGGACTTGGTCACCGTaGAGTCCCCCTGGAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: CRGHFFKAFGAGPHRAMGRTWSP*SPPGRG Trigger: ACCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCT...CCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | AGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGGACACGGGCAGGGTCTaGCCGATGCCATCCACATCC | + |
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Preference number: 4 (lower is better) Translates to: SPGAGGTSSRHSGLGRIGDTGRV*PMPSTS Trigger: GGATGTGGATGGCATCGGCCAGACCCTGCCCGTGTC...CCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | GGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGGGCGCGCCCCGTCTACATTaGACAGCTCAGTATTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GHFFKAFGAGPHRAMGVGAPRLH*TAQYCS Trigger: GCTGCAATACTGAGCTGTGCAATGTAGACGGGGCGC...GCCCACCCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | ACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGGGCGGGGACTCAGGAGTCCTGGTaGAGGGGGCACTTCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: TSSRHSGLGRIGPWGWAGTQESW*RGHFFK Trigger: CTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAGT...CCCCGCCCACCCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | TGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGAGCAGGGCAGGTCTGTaGCCAGAAAGGAGACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: CRGHFFKAFGAGPHRAMGSRAGL*PERRLR Trigger: CCTGAGTCTCCTTTCTGGGCACAGACCTGCCCTGCT...CCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | CTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCCCGAGGGCTTACACTTaGTGGCACAGGACTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LRSPGAGGTSSRHSGLGRPRAYT*WHRTWS Trigger: TGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGG...GCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGTGCACATGGTTTCGTTaGTGGTGCAGGTGGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: CRGHFFKAFGAGPHRAMGCTWFR*WCRWRW Trigger: CCATCGCCACCTGCACCACCAACGAAACCATGTGCA...CCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | AGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGGAGACTCAGGAGTCCTaGTGCAGGGGGCACTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SPGAGGTSSRHSGLGRIGETQES*CRGHFF Trigger: GAAGAAGTGCCCCCTGCACCAGGACTCCTGAGTCTC...CCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | GAAAGGAGACTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGGCAGGGTCTGGCCGATaGCATCCACATCCGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ERRLRSPGAGGTSSRHSGAGSGR*HPHPRA Trigger: AGCCCTCGGATGTGGATGGCATCGGCCAGACCCTGC...CCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAGTCTCCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | TGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGCCCGGGAGTAGAGTGTaGTCTTGCACATGGTTTCGT | + |
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Preference number: 4 (lower is better) Translates to: CRGHFFKAFGAGPHRAMGPGSRV*SCTWFR Trigger: ACGAAACCATGTGCAAGACCACACTCTACTCCCGGG...CCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | AGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGGTGTGGTCTTGCACATaGTTTCGTTGGTGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SPGAGGTSSRHSGLGRIGVWSCT*FRWWCR Trigger: CCTGCACCACCAACGAAACCATGTGCAAGACCACAC...CCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGAGACTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGTGCTGGCACAGGACTTaGTCACCGTGGAGTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: ERRLRSPGAGGTSSRHSGCWHRT*SPWSPP Trigger: AGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCA...CCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAGTCTCCTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CCA 90 bp | GAAAGGAGACTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGAGGGCTTACACTTGCTaGCACAGGACTTGGTCACCG | + |
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Preference number: 4 (lower is better) Translates to: ERRLRSPGAGGTSSRHSGRAYTC*HRTWSP Trigger: CGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCT...CCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAGTCTCCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR GCA 90 bp | GGAGACTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGAGTAGAGTGTGGTCTTaGACATGGTTTCGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GDSGVLVQGALLQGIRGWSRVWS*TWFRWW Trigger: CCACCAACGAAACCATGTGCAAGACCACACTCTACT...CCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAGTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CAA 90 bp | CACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGTGGGCGGGTTGCTGGCACAGGACTaGGTCACCGTGGAGTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: HFFKAFGAGPHRAMGVGGLLAQD*VTVESP Trigger: GGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAA...CCCGCCCACCCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS GCA 90 bp | CGGGCAGGGTCTGGCCGATGCCATCCACATCCGAGGGCTTACACTTaGTGGCACAGGACTTGGTCACCGTGGAGTCCCCCTGGAAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: RAGSGRCHPHPRAYT*WHRTWSPWSPPGRG Trigger: ACCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGGATGGCATCGGCCAGACCCTGCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CCA 90 bp | TACAGTCGGAGGCTCAAGAGTGGGAGGAGCGTGAGGGCCCCGCAGTaGAGGCTGTTCAGAGCGGGCGCCCCGTCTACATTGCACAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: YSRRLKSGRSVRAPQ*RLFRAGAPSTLHSS Trigger: TGAGCTGTGCAATGTAGACGGGGCGCCCGCTCTGAACAGCCTCCACTGCGGGGCCCTCACGCTCCTCCCACTCTTGAGCCTCCGACTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS GCA 90 bp | GGCTGTTCAGAGCGGGCGCCCCGTCTACATTGCACAGCTCAGTATTaGAGCAGGACACGGGCAGGGTCTGGCCGATGCCATCCACATCCG | + |
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Preference number: 5 (lower is better) Translates to: GCSERAPRLHCTAQY*SRTRAGSGRCHPHP Trigger: CGGATGTGGATGGCATCGGCCAGACCCTGCCCGTGTCCTGCTGCAATACTGAGCTGTGCAATGTAGACGGGGCGCCCGCTCTGAACAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CAA 90 bp | TGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGTCCGAGGGCTTACACTaGCTGGCACAGGACTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: CRGHFFKAFGAGPHRAMGSEGLH*LAQDLV Trigger: GACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGA...CCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CAA 90 bp | TGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTGGGCCGCATAGGGCCATGGGGGGCGCCCCGTCTACATaGCACAGCTCAGTATTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CRGHFFKAFGAGPHRAMGGAPST*HSSVLQ Trigger: CTGCAATACTGAGCTGTGCAATGTAGACGGGGCGCC...CCCCATGGCCCTATGCGGCCCAGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CCA 90 bp | GCAGGGTCTGGCCGATGCCATCCACATCCGAGGGCTTACACTTGCTaGCACAGGACTTGGTCACCGTGGAGTCCCCCTGGAAGGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: AGSGRCHPHPRAYTC*HRTWSPWSPPGRGT Trigger: TGTACCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGGATGGCATCGGCCAGACCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CCA 90 bp | CGATGCCATCCACATCCGAGGGCTTACACTTGCTGGCACAGGACTTaGTCACCGTGGAGTCCCCCTGGAAGGGGTACACTATCTCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: RCHPHPRAYTCWHRT*SPWSPPGRGTLSPG Trigger: CCCGGGAGATAGTGTACCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGGATGGCATCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS TCA 90 bp | GTGTGGTCTTGCACATGGTTTCGTTGGTGGTGCAGGTGGCGATGGTaGCACAGTCCGACACTCCTGTGGGCTCCGGACAGACGTAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VWSCTWFRWWCRWRW*HSPTLLWAPDRRSS Trigger: GCTGCTACGTCTGTCCGGAGCCCACAGGAGTGTCGGACTGTGTCACCATCGCCACCTGCACCACCAACGAAACCATGTGCAAGACCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CCA 90 bp | CCACATCCGAGGGCTTACACTTGCTGGCACAGGACTTGGTCACCGTaGAGTCCCCCTGGAAGGGGTACACTATCTCCCGGGAGTAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: PHPRAYTCWHRTWSP*SPPGRGTLSPGSRV Trigger: CACTCTACTCCCGGGAGATAGTGTACCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CAA 90 bp | AAGGAGACTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTTTGCACAGCTCAGTATaGCAGCAGGACACGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: KETQESWCRGHFFKAFGALHSSV*QQDTGR Trigger: CCTGCCCGTGTCCTGCTGCAATACTGAGCTGTGCAA...AGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAGTCTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS-3UTR CAA 90 bp | AAGGAGACTCAGGAGTCCTGGTGCAGGGGGCACTTCTTCAAGGCATTCGGGGCTTTGCACATGGTTTCGTaGGTGGTGCAGGTGGCGATG | + |
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Preference number: 5 (lower is better) Translates to: KETQESWCRGHFFKAFGALHMVS*VVQVAM Trigger: CATCGCCACCTGCACCACCAACGAAACCATGTGCAA...AGCCCCGAATGCCTTGAAGAAGTGCCCCCTGCACCAGGACTCCTGAGTCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS TCA 72 bp | GACTCTACAGTCGGAGGCTCAAGAGTGGGAGGAGCGTaGGGGCCCCGCAGTGGAGGCTGTTCAGAGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: DSTVGGSRVGGA*GPRSGGCSERA Trigger: CGCCCGCTCTGAACAGCCTCCACTGCGGGGCCCTCACGCTCCTCCCACTCTTGAGCCTCCGACTGTAGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CCA 72 bp | AGGCTCAAGAGTGGGAGGAGCGTGAGGGCCCCGCAGTaGAGGCTGTTCAGAGCGGGCGCCCCGTCTACATTG | + |
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Preference number: 6 (lower is better) Translates to: RLKSGRSVRAPQ*RLFRAGAPSTL Trigger: CAATGTAGACGGGGCGCCCGCTCTGAACAGCCTCCACTGCGGGGCCCTCACGCTCCTCCCACTCTTGAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CAA 90 bp | ACGGGCAGGGTCTGGCCGATGCCATCCACATCCGAGGGCTTACACTaGCTGGCACAGGACTTGGTCACCGTGGAGTCCCCCTGGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGRVWPMPSTSEGLH*LAQDLVTVESPWKG Trigger: CCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGGATGGCATCGGCCAGACCCTGCCCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS GCA 72 bp | GAGCGGGCGCCCCGTCTACATTGCACAGCTCAGTATTaGAGCAGGACACGGGCAGGGTCTGGCCGATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: ERAPRLHCTAQY*SRTRAGSGRCH Trigger: ATGGCATCGGCCAGACCCTGCCCGTGTCCTGCTGCAATACTGAGCTGTGCAATGTAGACGGGGCGCCCGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CCA 72 bp | GGCCGATGCCATCCACATCCGAGGGCTTACACTTGCTaGCACAGGACTTGGTCACCGTGGAGTCCCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GRCHPHPRAYTC*HRTWSPWSPPG Trigger: TCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGGATGGCATCGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CAA 90 bp | CCGATGCCATCCACATCCGAGGGCTTACACTTGCTGGCACAGGACTaGGTCACCGTGGAGTCCCCCTGGAAGGGGTACACTATCTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PMPSTSEGLHLLAQD*VTVESPWKGYTISR Trigger: CCGGGAGATAGTGTACCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGGATGGCATCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS GCA 72 bp | TCTGGCCGATGCCATCCACATCCGAGGGCTTACACTTaGTGGCACAGGACTTGGTCACCGTGGAGTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SGRCHPHPRAYT*WHRTWSPWSPP Trigger: AGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGGATGGCATCGGCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CCA 72 bp | AGGGCTTACACTTGCTGGCACAGGACTTGGTCACCGTaGAGTCCCCCTGGAAGGGGTACACTATCTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RAYTCWHRTWSP*SPPGRGTLSPG Trigger: CCCGGGAGATAGTGTACCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS TCA 72 bp | TGCACATGGTTTCGTTGGTGGTGCAGGTGGCGATGGTaGCACAGTCCGACACTCCTGTGGGCTCCGGACAGA | + |
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Preference number: 6 (lower is better) Translates to: CTWFRWWCRWRW*HSPTLLWAPDR Trigger: TCTGTCCGGAGCCCACAGGAGTGTCGGACTGTGTCACCATCGCCACCTGCACCACCAACGAAACCATGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CCA 72 bp | CCACATCCGAGGGCTTACACTTGCTGGCACAGGACTTaGTCACCGTGGAGTCCCCCTGGAAGGGGTACACTA | + |
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Preference number: 6 (lower is better) Translates to: PHPRAYTCWHRT*SPWSPPGRGTL Trigger: TAGTGTACCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CAA 72 bp | TCCACATCCGAGGGCTTACACTTGCTGGCACAGGACTaGGTCACCGTGGAGTCCCCCTGGAAGGGGTACACT | + |
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Preference number: 6 (lower is better) Translates to: STSEGLHLLAQD*VTVESPWKGYT Trigger: AGTGTACCCCTTCCAGGGGGACTCCACGGTGACCAAGTCCTGTGCCAGCAAGTGTAAGCCCTCGGATGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS GCA 72 bp | AGGGGTACACTATCTCCCGGGAGTAGAGTGTGGTCTTaGACATGGTTTCGTTGGTGGTGCAGGTGGCGATGG | + |
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Preference number: 6 (lower is better) Translates to: RGTLSPGSRVWS*TWFRWWCRWRW Trigger: CCATCGCCACCTGCACCACCAACGAAACCATGTGCAAGACCACACTCTACTCCCGGGAGATAGTGTACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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| CDS CCA 72 bp | CCTGGAAGGGGTACACTATCTCCCGGGAGTAGAGTGTaGTCTTGCACATGGTTTCGTTGGTGGTGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PGRGTLSPGSRV*SCTWFRWWCRW Trigger: CCACCTGCACCACCAACGAAACCATGTGCAAGACCACACTCTACTCCCGGGAGATAGTGTACCCCTTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359228.4 |
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