RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYNX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000180155

Ensembl transcript IDs: ENST00000522906.1, ENST00000613110.4, ENST00000614268.4, ENST00000614491.1, ENST00000620006.4, ENST00000621401.4, ENST00000652477.1

Found 801 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCCCCCTCTCCTCTaGCACTCTGCCCTGCACCCAGAGGCAGCGCTGGAGGCCTTACTC +
Preference number: 1 (lower is better)
Translates to: GNWAPMVPSASPPLL*HSALHPEAALEALL
Trigger: GAGTAAGGCCTCCAGCGCTGCCTCTGGGTGCAGGGCAGAGTGGCAGAGGAGAGGGGGAGAGGCACTGGGCACCATGGGGGCCCAGTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 90 bp GCAGCTGAGAGGGCCTCATTTGGGCACTGCCCTGAGGCTGGCACTTaGAGGTGGGGGCCCTTGGGAGCTCTGGGAGGCACCTGGCAGCCT +
Preference number: 1 (lower is better)
Translates to: AAERASFGHCPEAGT*RWGPLGALGGTWQP
Trigger: AGGCTGCCAGGTGCCTCCCAGAGCTCCCAAGGGCCCCCACCTGCAAGTGCCAGCCTCAGGGCAGTGCCCAAATGAGGCCCTCTCAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 90 bp AGTCCACACACCCAGCTGGGGCTTCCACCCTGCCCTCCCAGTGGGTaGATCCCCAGGTGGAAGGTGATGGAGGGACCCACTCACTGTGCG +
Preference number: 1 (lower is better)
Translates to: SPHTQLGLPPCPPSG*IPRWKVMEGPTHCA
Trigger: CGCACAGTGAGTGGGTCCCTCCATCACCTTCCACCTGGGGATGCACCCACTGGGAGGGCAGGGTGGAAGCCCCAGCTGGGTGTGTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 90 bp GTCACGTTCCTCCCGCTCCGGGCCCGTTCCCACCCAAGGTCCCTTTaGAGAAGACTGGCACTGTCCTCCTCCAGCGGGAACTGGGTGTGC +
Preference number: 1 (lower is better)
Translates to: VTFLPLRARSHPRSL*RRLALSSSSGNWVC
Trigger: GCACACCCAGTTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAACGGGCCCGGAGCGGGAGGAACGTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp GGTGCCAAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTaGCAGCTCCTGGCCTCAGTAGGAAGCGTGACTAGGCCTGGAGGA +
Preference number: 1 (lower is better)
Translates to: GAKGPPPTALIPYRS*QLLASVGSVTRPGG
Trigger: TCCTCCAGGCCTAGTCACGCTTCCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp TGGGAGTCCACACACCCAGCTGGGGCTTCCACCCTGCCCTCCCAGTaGGTGCATCCCCAGGTGGAAGGTGATGGAGGGACCCACTCACTG +
Preference number: 1 (lower is better)
Translates to: WESTHPAGASTLPSQ*VHPQVEGDGGTHSL
Trigger: CAGTGAGTGGGTCCCTCCATCACCTTCCACCTGGGGATGCACCCACTGGGAGGGCAGGGTGGAAGCCCCAGCTGGGTGTGTGGACTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp TCCCGCTCCGGGCCCGTTCCCACCCAAGGTCCCTTTGCAGAAGACTaGCACTGTCCTCCTCCAGCGGGAACTGGGTGTGCCCTCAGCAAG +
Preference number: 1 (lower is better)
Translates to: SRSGPVPTQGPFAED*HCPPPAGTGCALSK
Trigger: CTTGCTGAGGGCACACCCAGTTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAACGGGCCCGGAGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp GAGCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTaGCTGCAGCTGAGAGGGCCTCATTTGGGCACTGCCCTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: EPKAASLPVSIPRHR*LQLRGPHLGTALRL
Trigger: CAGCCTCAGGGCAGTGCCCAAATGAGGCCCTCTCAGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR TCA 90 bp GAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTaGCTGCTCCCAGCCTCTCCCAAGGACTTAGGAGCCCAAAGCCGC +
Preference number: 1 (lower is better)
Translates to: EEATQPDNGLAQAAQ*LLPASPKDLGAQSR
Trigger: GCGGCTTTGGGCTCCTAAGTCCTTGGGAGAGGCTGGGAGCAGTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 90 bp CAGCCACGCACTCCCCATGAGTGGGCCTGCCCAGCATTAGCTGAGTaGCTTCTGTGTGCTCTACGCCAGGTGCCAAGGGCAGGCCAGCCA +
Preference number: 1 (lower is better)
Translates to: QPRTPHEWACPALAE*LLCALRQVPRAGQP
Trigger: TGGCTGGCCTGCCCTTGGCACCTGGCGTAGAGCACACAGAAGGCACTCAGCTAATGCTGGGCAGGCCCACTCATGGGGAGTGCGTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR TCA 90 bp GGCATGGCTGAGGAGGTCGCAGGGAGTGTGGAGGGTGAGGCAGGGTaGGCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTT +
Preference number: 1 (lower is better)
Translates to: GMAEEVAGSVEGEAG*AGCEGVAVCLESFV
Trigger: AACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGCTCACCCTGCCTCACCCTCCACACTCCCTGCGACCTCCTCAGCCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR TCA 90 bp CTCAGCAAGACTCTGCCCCCTCCCATCCTCATGTTCTCAGGAGACTaGAGCTGGGCACTCAGAACCAGCCCCAGGAGCAGAACGCAGGCC +
Preference number: 1 (lower is better)
Translates to: LSKTLPPPILMFSGD*SWALRTSPRSRTQA
Trigger: GGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGAGTGCCCAGCTTCAGTCTCCTGAGAACATGAGGATGGGAGGGGGCAGAGTCTTGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 90 bp ACTGTCCTCCTCCAGCGGGAACTGGGTGTGCCCTCAGCAAGACTCTaGCCCCTCCCATCCTCATGTTCTCAGGAGACTGAAGCTGGGCAC +
Preference number: 1 (lower is better)
Translates to: TVLLQRELGVPSARL*PLPSSCSQETEAGH
Trigger: GTGCCCAGCTTCAGTCTCCTGAGAACATGAGGATGGGAGGGGGCAGAGTCTTGCTGAGGGCACACCCAGTTCCCGCTGGAGGAGGACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp ACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTaGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTGGGC +
Preference number: 1 (lower is better)
Translates to: TASKGQGLEVRSCGG*GRSGVFLPTVLTLG
Trigger: GCCCAGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR GCA 90 bp CTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAACTGGGTGTaGCCTCAGCAAGACTCTGCCCCCTCCCATCCTCATGTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: LCRRLALSSSSGNWV*PQQDSAPSHPHVLR
Trigger: CCTGAGAACATGAGGATGGGAGGGGGCAGAGTCTTGCTGAGGGCACACCCAGTTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 90 bp TGCATACAACCCGGACAAGTTTACTGCTGTGATTTCTGCCGGCGCTaGTGTGCCGGTTCCCTGGTGCTGCACAGCCACGCACTCCCCATG +
Preference number: 1 (lower is better)
Translates to: CIQPGQVYCCDFCRR*CAGSLVLHSHALPM
Trigger: CATGGGGAGTGCGTGGCTGTGCAGCACCAGGGAACCGGCACAGCAGCGCCGGCAGAAATCACAGCAGTAAACTTGTCCGGGTTGTATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp CCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTaGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCT +
Preference number: 1 (lower is better)
Translates to: PHSIERSRPRSEVVW*LGEVGCLLAHSPDP
Trigger: AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp AGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAACTaGGTGTGCCCTCAGCAAGACTCTGCCCCCTCCCATCCTCATGTT +
Preference number: 1 (lower is better)
Translates to: RSLCRRLALSSSSGN*VCPQQDSAPSHPHV
Trigger: AACATGAGGATGGGAGGGGGCAGAGTCTTGCTGAGGGCACACCCAGTTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp ATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTaGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGAC +
Preference number: 1 (lower is better)
Translates to: IPHSIERSRPRSEVV*WLGEVGCLLAHSPD
Trigger: GTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR TCA 90 bp CACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTaGGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCA +
Preference number: 1 (lower is better)
Translates to: HFWDPTQHRKVKASK*GRVVVGGGRVSSCP
Trigger: TGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR TCA 90 bp TCCATCGCCACCTTGATGCATACAACCCGGACAAGTTTACTGCTGTaGTTTCTGCCGGCGCTGCTGTGCCGGTTCCCTGGTGCTGCACAG +
Preference number: 1 (lower is better)
Translates to: SIATLMHTTRTSLLL*FLPALLCRFPGAAQ
Trigger: CTGTGCAGCACCAGGGAACCGGCACAGCAGCGCCGGCAGAAATCACAGCAGTAAACTTGTCCGGGTTGTATGCATCAAGGTGGCGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp CCCCTGACCAGGGCCATACTTTGGGGCCGGGACAATCCTACCACATaGATATGTCACCATCCTGCCCATGCGGGATGGCTTGAAGGGTTT +
Preference number: 1 (lower is better)
Translates to: PLTRAILWGRDNPTT*ICHHPAHAGWLEGF
Trigger: AAACCCTTCAAGCCATCCCGCATGGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 90 bp GAGATGCAATTTCCAGCAGGGGCTCCCCTGACCAGGGCCATACTTTaGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCC +
Preference number: 1 (lower is better)
Translates to: EMQFPAGAPLTRAIL*GRDNPTTWICHHPA
Trigger: GGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGTCAGGGGAGCCCCTGCTGGAAATTGCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR TCA 90 bp GGAGAGATGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTaGGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAG +
Preference number: 1 (lower is better)
Translates to: GEMPSIQRALMPTTS*ARPAFPFHHPLLLK
Trigger: CTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCATCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR TCA 90 bp TTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGAGAGATaGCGAATCAGATGCTACATAGTGGGGGAGGCGGCAGCTGGCCTG +
Preference number: 1 (lower is better)
Translates to: FSEFQSYEPNRLHER*RIRCYIVGEAAAGL
Trigger: CAGGCCAGCTGCCGCCTCCCCCACTATGTAGCATCTGATTCGTCATCTCTCATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTAGGTCGTGTGGTGGTTaGGGGAGGTCGGGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPRSCGG*GRSGVF
Trigger: GAAGACACCCGACCTCCCCCAACCACCACACGACCT...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTCTGCGTCTTTTGCCTTaGTCGGCTGGGTCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPLRLLP*SAGSCC
Trigger: ACAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAG...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCAGGTCGCAGGGAGTGTaGAGGGTGAGGCAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: KGPPPTALIPYRSWQLLARSQGV*RVRQGE
Trigger: CTCACCCTGCCTCACCCTCCACACTCCCTGCGACCT...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTGGGTCCTGCTGTGGTTaGGGACCAGGACTCGGGGGA +
Preference number: 2 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSGSCCG*GPGLGG
Trigger: TCCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCC...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTACGGCCACGAGAGGGTaGCATGCTCCGCCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSTATRG*HAPPSH
Trigger: GTGGGAAGGCGGAGCATGCCACCCTCTCGTGGCCGT...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGTCTTGCCCACAGTCCTaGCCCTGGGCATGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRSCPQS*PWAWLR
Trigger: CCTCAGCCATGCCCAGGGTCAGGACTGTGGGCAAGA...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCAGCAGGGGCTCCCCTaGCCAGGGCCATACTTTGGG +
Preference number: 2 (lower is better)
Translates to: CERDPRSGNWAPMVPSASQQGLP*PGPYFG
Trigger: CCCAAAGTATGGCCCTGGTCAGGGGAGCCCCTGCTG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTGAGACCCTCATTCCCTaGTCCCCCAGGGGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAETLIP*SPRGPA
Trigger: TGCAGGACCCCTGGGGGATCAGGGAATGAGGGTCTC...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTCTCCCATCTGCTCAGTaGTCCCTGCCTGACTGGGCC +
Preference number: 2 (lower is better)
Translates to: AQSRLPPGKHPKASLAAALPSAQ*SLPDWA
Trigger: GGCCCAGTCAGGCAGGGAGCACTGAGCAGATGGGAG...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTCATGGCCCTAGCTCCTaGCAGCTTCAGGCCTGGTGC +
Preference number: 2 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSHGPSS*QLQAWC
Trigger: GCACCAGGCCTGAAGCTGGCAGGAGCTAGGGCCATG...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCACGAGAGGGTGGCATaGTCCGCCTTCCCACGCCCA +
Preference number: 2 (lower is better)
Translates to: CERDPRSGNWAPMVPSASHERVA*SAFPRP
Trigger: TGGGCGTGGGAAGGCGGAGCATGCCACCCTCTCGTG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCCCCAGAAGGTGGGCTTaGCCACAGCTCCCATCTGCT +
Preference number: 2 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAPRRWA*PQLPSA
Trigger: AGCAGATGGGAGCTGTGGCCAAGCCCACCTTCTGGG...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTACCCTGCCCTCCCAGTaGGTGCATCCCCAGGTGGAA +
Preference number: 2 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSTLPSQ*VHPQVE
Trigger: TTCCACCTGGGGATGCACCCACTGGGAGGGCAGGGT...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTGGAGCACTGGTCAGGTaGGGGCCTCAGGTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: CERDPRSGNWAPMVPSASGALVR*GPQVQR
Trigger: ACGCTGCACCTGAGGCCCCCACCTGACCAGTGCTCC...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CAA 90 bp AGTCACGTTCCTCCCGCTCCGGGCCCGTTCCCACCCAAGGTCCCTTaGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAACTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: SHVPPAPGPFPPKVP*QKTGTVLLQRELGV
Trigger: CACACCCAGTTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAACGGGCCCGGAGCGGGAGGAACGTGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTTCTTGCCCACAGTCCTaGCCCTGGGCATGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: CERDPRSGNWAPMVPSASSCPQS*PWAWLR
Trigger: CCTCAGCCATGCCCAGGGTCAGGACTGTGGGCAAGA...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCACTCGGGGGACCACCTaGTCTGCCCCTTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCTRGTT*SAPFPP
Trigger: GGGAGGGAAAGGGGCAGAGCAGGTGGTCCCCCGAGT...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCACGAGAGGGTGGCATaGTCCGCCTTCCCACGCCCA +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCHERVA*SAFPRP
Trigger: TGGGCGTGGGAAGGCGGAGCATGCCACCCTCTCGTG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTGCTCCCTGGGCTACCTaGATCGGGGATGGATTGGTG +
Preference number: 2 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSAPWAT*IGDGLV
Trigger: CACCAATCCATCCCCGATGCAGGTAGCCCAGGGAGC...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCCAGGGCCGCAGCCCTaGCCCCAAAGACCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHPGPQP*PQRPQD
Trigger: GTCCTGGGGTCTTTGGGGGCAGGGCTGCGGCCCTGG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTAGTGAGGTCGTGTGGTaGTTGGGGGAGGTCGGGTGT +
Preference number: 2 (lower is better)
Translates to: AQSRLPPGKHPKASLAAASEVVW*LGEVGC
Trigger: ACACCCGACCTCCCCCAACCACCACACGACCTCACT...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCCTCCCCTGCAGGGGGTaGCTCCAACTCGGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPLPCRG*LQLGPG
Trigger: GCCAGGCCCGAGTTGGAGCCACCCCCTGCAGGGGAG...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGGAGCACTGGTCAGGTaGGGGCCTCAGGTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCGALVR*GPQVQR
Trigger: ACGCTGCACCTGAGGCCCCCACCTGACCAGTGCTCC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTTCAGGACACCAGAGCTaGGAGCACTGGTCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: AQSRLPPGKHPKASLAAASGHQS*EHWSGG
Trigger: CCCACCTGACCAGTGCTCCCAGCTCTGGTGTCCTGA...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTCTGCAAGGAGACCCCTaGGGTGGAGACCCTCATTCC +
Preference number: 2 (lower is better)
Translates to: AQSRLPPGKHPKASLAAALQGDP*GGDPHS
Trigger: GGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAG...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCCCCGAAGTGGGAACTaGGCCCCCATGGTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCPRSGN*APMVPS
Trigger: ACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTCAGTCCTGCGTCTTTTaGCTTGCTCGGCTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAQSCVF*LARLGP
Trigger: AGGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTG...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTACCCGACAATGGGCTTaGGCAAGCCGCGCAGTGACT +
Preference number: 2 (lower is better)
Translates to: CERDPRSGNWAPMVPSASTRQWA*ASRAVT
Trigger: AGTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGT...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGATTTCTGCCGGCGCTaGTGTGCCGGTTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCDFCRR*CAGSLV
Trigger: CACCAGGGAACCGGCACAGCAGCGCCGGCAGAAATC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCTCTCCCCCTCTCCTCTaGCACTCTGCCCTGCACCCA +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCSPPLL*HSALHP
Trigger: TGGGTGCAGGGCAGAGTGGCAGAGGAGAGGGGGAGA...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAATGCCAGCTTCAGGCCTaGTGCCCTCCCCGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: FPPKVPLQKTGTVLLQRECQLQA*CPPREG
Trigger: CCCCTCACGGGGAGGGCACCAGGCCTGAAGCTGGCA...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTTGGATTGGTGCGTGTTaGGCTGACCCCTGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSWIGAC*ADPCFP
Trigger: TGGGAAGCAGGGGTCAGCCCAACACGCACCAATCCA...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAAGACCCTGGGCATGGCTaGGGAGGTCGCAGGGAGTGT +
Preference number: 2 (lower is better)
Translates to: FPPKVPLQKTGTVLLQREDPGHG*GGRREC
Trigger: ACACTCCCTGCGACCTCCTCAGCCATGCCCAGGGTC...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTGTCAAGGGGTTTGACTaGGAGGACACACACCCCTTG +
Preference number: 2 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAVKGFD*EDTHPL
Trigger: CAAGGGGTGTGTGTCCTCTCAGTCAAACCCCTTGAC...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGCTCCCATCTGCTCAGTaGTCCCTGCCTGACTGGGCC +
Preference number: 2 (lower is better)
Translates to: GAERRPAYRLTARRPLGWLPSAQ*SLPDWA
Trigger: GGCCCAGTCAGGCAGGGAGCACTGAGCAGATGGGAG...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTGGTGGGGGCCTCAGGTaGAGCGTGACCGCTGGCACC +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLGGGLR*SVTAGT
Trigger: GGTGCCAGCGGTCACGCTGCACCTGAGGCCCCCACC...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGCAGGTGTGAGAAGCTaGCCACCCCACCCCTCAACA +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCAGVRS*PPHPST
Trigger: TGTTGAGGGGTGGGGTGGGCAGCTTCTCACACCTGC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCGGGCTGCTATACAGTaGTCAGGGCCACAGTGCAGT +
Preference number: 2 (lower is better)
Translates to: CERDPRSGNWAPMVPSASRAAIQ*SGPQCS
Trigger: ACTGCACTGTGGCCCTGAGCACTGTATAGCAGCCCG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATGGTGGGAGAAGCGGCTaGACTGTGGTGCAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHGGRSG*TVVQGV
Trigger: CACCCCCTGCACCACAGTGCAGCCGCTTCTCCCACC...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCGGGTCCTGCTGTGGTTaGGGACCAGGACTCGGGGGA +
Preference number: 2 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPGSCCG*GPGLGG
Trigger: TCCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCC...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTTACCTGCATCGGGGATaGATTGGTGCGTGTTGGGCT +
Preference number: 2 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAYLHRG*IGACWA
Trigger: AGCCCAACACGCACCAATCCATCCCCGATGCAGGTA...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGTGCAGCGTGACCGCTaGCACCAAAAGGTCTCACGC +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCVQRDR*HQKVSR
Trigger: GCGTGAGACCTTTTGGTGCCAGCGGTCACGCTGCAC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCCTGCCCATGCGGGATaGCTTGAAGGGTTTCTCAGG +
Preference number: 2 (lower is better)
Translates to: CERDPRSGNWAPMVPSASPAHAG*LEGFLR
Trigger: CCTGAGAAACCCTTCAAGCCATCCCGCATGGGCAGG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTAGGAGACCCCTGGGGTaGAGACCCTCATTCCCTGAT +
Preference number: 2 (lower is better)
Translates to: CERDPRSGNWAPMVPSASRRPLG*RPSFPD
Trigger: ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCT...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCAACCATGTGTGGGGCTaGGACAGGTCAGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCNHVWG*DRSGWW
Trigger: CCACCACCCTGACCTGTCCCAGCCCCACACATGGTT...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CAA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTaGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTGGG +
Preference number: 2 (lower is better)
Translates to: HSIERSRPRSEVVWW*GEVGCLLAHSPDPG
Trigger: CCCAGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGTCTTGCCCACAGTCCTaGCCCTGGGCATGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: HSIERSRPRSEVVWWLGESCPQS*PWAWLR
Trigger: CCTCAGCCATGCCCAGGGTCAGGACTGTGGGCAAGA...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTGTCAAGGGGTTTGACTaGGAGGACACACACCCCTTG +
Preference number: 2 (lower is better)
Translates to: CERDPRSGNWAPMVPSASVKGFD*EDTHPL
Trigger: CAAGGGGTGTGTGTCCTCTCAGTCAAACCCCTTGAC...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCGCCTCAGGTGCAGCGTaGCCGCTGGCACCAAAAGGT +
Preference number: 2 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPASGAA*PLAPKG
Trigger: ACCTTTTGGTGCCAGCGGTCACGCTGCACCTGAGGC...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTGGTGCAGGGGGTGGTaGGTGAGCGAGGAGGCACTA +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHWCRGW*VSEEAL
Trigger: TAGTGCCTCCTCGCTCACTCACCACCCCCTGCACCA...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCCATGGCCCTAGCTCCTaGCAGCTTCAGGCCTGGTGC +
Preference number: 2 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPHGPSS*QLQAWC
Trigger: GCACCAGGCCTGAAGCTGGCAGGAGCTAGGGCCATG...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAATGCCCTCCCAGTGGGTaGATCCCCAGGTGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: FPPKVPLQKTGTVLLQRECPPSG*IPRWKV
Trigger: CACCTTCCACCTGGGGATGCACCCACTGGGAGGGCA...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCGGGCTGCTATACAGTaGTCAGGGCCACAGTGCAGT +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCRAAIQ*SGPQCS
Trigger: ACTGCACTGTGGCCCTGAGCACTGTATAGCAGCCCG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCACTGGGCCCCCATGGTaGCCAGTGCCTCTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTTGPPW*PVPLPL
Trigger: GAGGGGGAGAGGCACTGGGCACCATGGGGGCCCAGT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCTGCCAGCTTCAGGCCTaGTGCCCTCCCCGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: PYFGAGTILPHGYVTILPCQLQA*CPPREG
Trigger: CCCCTCACGGGGAGGGCACCAGGCCTGAAGCTGGCA...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGACGGCCACGAGAGGGTaGCATGCTCCGCCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: SEPAPGAERRPAYRLTARTATRG*HAPPSH
Trigger: GTGGGAAGGCGGAGCATGCCACCCTCTCGTGGCCGT...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCGGGTGCATCCCCAGGTaGAAGGTGATGGAGGGACCC +
Preference number: 2 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPGCIPR*KVMEGP
Trigger: GGGTCCCTCCATCACCTTCCACCTGGGGATGCACCC...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCCTGCCCATGCGGGATaGCTTGAAGGGTTTCTCAGG +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCPAHAG*LEGFLR
Trigger: CCTGAGAAACCCTTCAAGCCATCCCGCATGGGCAGG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCGGCCCTTGGGAGCTCTaGGAGGCACCTGGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTGPWEL*EAPGSL
Trigger: GAGGCTGCCAGGTGCCTCCCAGAGCTCCCAAGGGCC...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGAGGAGGCACTAGTGTaGGGCAGCTACTTCACCTCC +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCEEALV*GSYFTS
Trigger: GGAGGTGAAGTAGCTGCCCCACACTAGTGCCTCCTC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTGGGCTGGGCGGAAGCTaGCAGGGCTGTCCACAGGGA +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLGLGGS*QGCPQG
Trigger: TCCCTGTGGACAGCCCTGCCAGCTTCCGCCCAGCCC...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATGAGGGTGAGGCAGGGTaGGCTGGGTGCGAGGGTGTA +
Preference number: 2 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDEGEAG*AGCEGV
Trigger: TACACCCTCGCACCCAGCTCACCCTGCCTCACCCTC...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGGAGGGTGAGGCAGGGTaGGCTGGGTGCGAGGGTGTA +
Preference number: 2 (lower is better)
Translates to: RTLLGSHTASKGQGLEVREGEAG*AGCEGV
Trigger: TACACCCTCGCACCCAGCTCACCCTGCCTCACCCTC...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGGACCCTGGGCATGGCTaGGGAGGTCGCAGGGAGTGT +
Preference number: 2 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWDPGHG*GGRREC
Trigger: ACACTCCCTGCGACCTCCTCAGCCATGCCCAGGGTC...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATGCTCTGGGCCCAGTATaGTGCCCATCTTCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHALGPV*CPSSLW
Trigger: CCAGAGGGAAGATGGGCATCATACTGGGCCCAGAGC...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACGCCACGCACTCCCCATaGGTGGGCCTGCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: STGRKAGISTEGLSASFDATHSP*VGLPSI
Trigger: AATGCTGGGCAGGCCCACTCATGGGGAGTGCGTGGC...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGCAGCTTCAGGCCTGGTaGCCTCCCCGTGAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLQLQAW*PPREGV
Trigger: CACCCCCTCACGGGGAGGGCACCAGGCCTGAAGCTG...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTGGGGCTTCCACCCTaGCCTCCCAGTGGGTGCATC +
Preference number: 2 (lower is better)
Translates to: STGRKAGISTEGLSASFDLGLPP*PPSGCI
Trigger: GATGCACCCACTGGGAGGGCAGGGTGGAAGCCCCAG...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCGTGCTCTACGCCAGGTaGCAAGGGCAGGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTVLYAR*QGQASQ
Trigger: CTGGCTGGCCTGCCCTTGGCACCTGGCGTAGAGCAC...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGAAAGCCGGACACTTTTaGGATCCCACACAGCATCGA +
Preference number: 2 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRKAGHF*DPTQHR
Trigger: TCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTTTGCCTTGCTCGGCTaGGTCCTGCTGTGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHFALLG*VLLWLG
Trigger: CCCCAACCACAGCAGGACCCAGCCGAGCAAGGCAAA...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATACGGCCACGAGAGGGTaGCATGCTCCGCCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDTATRG*HAPPSH
Trigger: GTGGGAAGGCGGAGCATGCCACCCTCTCGTGGCCGT...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCGGAGCACTGGTCAGGTaGGGGCCTCAGGTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: PYFGAGTILPHGYVTILPGALVR*GPQVQR
Trigger: ACGCTGCACCTGAGGCCCCCACCTGACCAGTGCTCC...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCAGAGCTGGGAGCACTaGTCAGGTGGGGGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDQSWEH*SGGGLR
Trigger: CCTGAGGCCCCCACCTGACCAGTGCTCCCAGCTCTG...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCTGCAAGGAGACCCCTaGGGTGGAGACCCTCATTCC +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHLQGDP*GGDPHS
Trigger: GGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTGCCCATCTTCCCTCTaGGGAGTCACGTTCCTCCCG +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHCPSSL*GVTFLP
Trigger: CGGGAGGAACGTGACTCCCCAGAGGGAAGATGGGCA...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCGCACTCCCCATGAGTaGGCCTGCCCAGCATTAGCT +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHRTPHE*ACPALA
Trigger: AGCTAATGCTGGGCAGGCCCACTCATGGGGAGTGCG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTCGAGAGCTTTGTTCTTaGGTGGGTCTGCCTCGGGGG +
Preference number: 2 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGRELCS*VGLPRG
Trigger: CCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCG...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGCGAGAGCTTTGTTCTTaGGTGGGTCTGCCTCGGGGG +
Preference number: 2 (lower is better)
Translates to: SEPAPGAERRPAYRLTARRELCS*VGLPRG
Trigger: CCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCG...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGGACCCTGGGCATGGCTaGGGAGGTCGCAGGGAGTGT +
Preference number: 2 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKDPGHG*GGRREC
Trigger: ACACTCCCTGCGACCTCCTCAGCCATGCCCAGGGTC...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGTGGTGCGTGTTGGGCTaGCCCCTGCTTCCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLWCVLG*PLLPRP
Trigger: AGGCCTGGGAAGCAGGGGTCAGCCCAACACGCACCA...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAACCATGCGGGATGGCTTaGAGGGTTTCTCAGGACACC +
Preference number: 2 (lower is better)
Translates to: FPPKVPLQKTGTVLLQREPCGMA*RVSQDT
Trigger: GGTGTCCTGAGAAACCCTTCAAGCCATCCCGCATGG...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCATGTTCTCAGGAGACTaGAGCTGGGCACTCAGAACC +
Preference number: 2 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCMFSGD*SWALRT
Trigger: GGTTCTGAGTGCCCAGCTTCAGTCTCCTGAGAACAT...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACTCGGGGGACCACCTaGTCTGCCCCTTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLTRGTT*SAPFPP
Trigger: GGGAGGGAAAGGGGCAGAGCAGGTGGTCCCCCGAGT...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCAGTCCTGCGTCTTTTaGCTTGCTCGGCTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHQSCVF*LARLGP
Trigger: AGGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCGGTGGGGGCCTCAGGTaGAGCGTGACCGCTGGCACC +
Preference number: 2 (lower is better)
Translates to: AGISTEGLSASFDLFQSFGGGLR*SVTAGT
Trigger: GGTGCCAGCGGTCACGCTGCACCTGAGGCCCCCACC...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTACTGCTGTGATTTCTaGCGGCGCTGCTGTGCCGGT +
Preference number: 2 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHYCCDF*RRCCAG
Trigger: ACCGGCACAGCAGCGCCGGCAGAAATCACAGCAGTA...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACTCTCCTCTGCCACTCTaGCCTGCACCCAGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: STGRKAGISTEGLSASFDSPLPL*PAPRGS
Trigger: GCTGCCTCTGGGTGCAGGGCAGAGTGGCAGAGGAGA...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACAGACCAGAGCTCCTaGTGGAGCCGGGTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLTDQSS*WSRVSP
Trigger: TGGGGACACCCGGCTCCAGCAGGAGCTCTGGTCTGT...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACGGGCTTCCCAGAAGGTaGGCTTGGCCACAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: STGRKAGISTEGLSASFDGLPRR*AWPQLP
Trigger: TGGGAGCTGTGGCCAAGCCCACCTTCTGGGAAGCCC...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCGGGTGCATCCCCAGGTaGAAGGTGATGGAGGGACCC +
Preference number: 2 (lower is better)
Translates to: PYFGAGTILPHGYVTILPGCIPR*KVMEGP
Trigger: GGGTCCCTCCATCACCTTCCACCTGGGGATGCACCC...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATGGGTGCATCCCCAGGTaGAAGGTGATGGAGGGACCC +
Preference number: 2 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDGCIPR*KVMEGP
Trigger: GGGTCCCTCCATCACCTTCCACCTGGGGATGCACCC...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCCCTGCCCATGCGGGATaGCTTGAAGGGTTTCTCAGG +
Preference number: 2 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPPAHAG*LEGFLR
Trigger: CCTGAGAAACCCTTCAAGCCATCCCGCATGGGCAGG...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTGACAATCCTACCACATaGATATGTCACCATCCTGCC +
Preference number: 2 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSDNPTT*ICHHPA
Trigger: GGCAGGATGGTGACATATCCATGTGGTAGGATTGTC...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCAGTCCCTCCCAGCCCTaGCTGAGGAAGCCACCCAAC +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTSPSQP*LRKPPN
Trigger: GTTGGGTGGCTTCCTCAGCCAGGGCTGGGAGGGACT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTAGTCCCTCCCAGCCCTaGCTGAGGAAGCCACCCAAC +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLSPSQP*LRKPPN
Trigger: GTTGGGTGGCTTCCTCAGCCAGGGCTGGGAGGGACT...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGAGGGCCACAGTGCAGTaGGGGGACCCACGTCCATCG +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLRATVQ*GDPRPS
Trigger: CGATGGACGTGGGTCCCCCCACTGCACTGTGGCCCT...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGTCTTGCCCACAGTCCTaGCCCTGGGCATGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLSCPQS*PWAWLR
Trigger: CCTCAGCCATGCCCAGGGTCAGGACTGTGGGCAAGA...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCGTCAAGGCCTCGAAGTaGGGTCGTGTGGTGGTTGGG +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTVKASK*GRVVVG
Trigger: CCCAACCACCACACGACCTCACTTCGAGGCCTTGAC...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGAGACCCTCATTCCCTaGTCCCCCAGGGGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLETLIP*SPRGPA
Trigger: TGCAGGACCCCTGGGGGATCAGGGAATGAGGGTCTC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCATCGCTGGCTGCAGCTaGGAGGGCCTCATTTGGGCA +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTIAGCS*EGLIWA
Trigger: TGCCCAAATGAGGCCCTCTCAGCTGCAGCCAGCGAT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCCCAAGCAGCCACTCCTaGGTCACTCGGGCATGTCCA +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTPSSHS*VTRACP
Trigger: TGGACATGCCCGAGTGACTCAGGAGTGGCTGCTTGG...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGCTGCGTCTTTTGCCTTaGTCGGCTGGGTCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: SEPAPGAERRPAYRLTARLRLLP*SAGSCC
Trigger: ACAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAG...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCGCATCCCCCAGTCCTaGGTCTTTTGCCTTGCTCGG +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLRIPQS*VFCLAR
Trigger: CCGAGCAAGGCAAAAGACGCAGGACTGGGGGATGCG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACCCGACAATGGGCTTaGGCAAGCCGCGCAGTGACT +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLTRQWA*ASRAVT
Trigger: AGTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGT...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGTCTCCTCTGCCACTCTaGCCTGCACCCAGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLSPLPL*PAPRGS
Trigger: GCTGCCTCTGGGTGCAGGGCAGAGTGGCAGAGGAGA...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATACTGGGCCCCCATGGTaGCCAGTGCCTCTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANTGPPW*PVPLPL
Trigger: GAGGGGGAGAGGCACTGGGCACCATGGGGGCCCAGT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGAGGTCGCAGGGAGTGTaGAGGGTGAGGCAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSRSQGV*RVRQGE
Trigger: CTCACCCTGCCTCACCCTCCACACTCCCTGCGACCT...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGGGCTTCCCAGAAGGTaGGCTTGGCCACAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLGLPRR*AWPQLP
Trigger: TGGGAGCTGTGGCCAAGCCCACCTTCTGGGAAGCCC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTTTTGCCTTGCTCGGCTaGGTCCTGCTGTGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLFALLG*VLLWLG
Trigger: CCCCAACCACAGCAGGACCCAGCCGAGCAAGGCAAA...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCGGCCCTTGGGAGCTCTaGGAGGCACCTGGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: AGISTEGLSASFDLFQSFGPWEL*EAPGSL
Trigger: GAGGCTGCCAGGTGCCTCCCAGAGCTCCCAAGGGCC...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGCACCCAACCCGACAATaGGCTTGCGCAAGCCGCGCA +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLHPTRQ*ACASRA
Trigger: TGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTG...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTAACCATGTGTGGGGCTaGGACAGGTCAGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLNHVWG*DRSGWW
Trigger: CCACCACCCTGACCTGTCCCAGCCCCACACATGGTT...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATGGAACTGGGCCCCCATaGTGCCCAGTGCCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANGTGPP*CPVPLP
Trigger: GGGGAGAGGCACTGGGCACCATGGGGGCCCAGTTCC...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAAAAACGTCAAGGGGTTTaGCTGAGAGGACACACACCC +
Preference number: 2 (lower is better)
Translates to: FPPKVPLQKTGTVLLQREKRQGV*LRGHTP
Trigger: GGGTGTGTGTCCTCTCAGTCAAACCCCTTGACGTTT...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCCCATGCGGGATGGCTTaGAGGGTTTCTCAGGACACC +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTPCGMA*RVSQDT
Trigger: GGTGTCCTGAGAAACCCTTCAAGCCATCCCGCATGG...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAAAGGACACACACCCCTTaGTGGACCCGAAAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: FPPKVPLQKTGTVLLQRERTHTP*WTRKSF
Trigger: GAAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGTCCT...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCAGTCCTGCGTCTTTTaGCTTGCTCGGCTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLQSCVF*LARLGP
Trigger: AGGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATCTGGGGTGGGGTCCCTaGGAGTCCACACACCCAGCT +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANLGWGP*ESTHPA
Trigger: AGCTGGGTGTGTGGACTCCCAGGGACCCCACCCCAG...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGTGCAGCGTGACCGCTaGCACCAAAAGGTCTCACGC +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLVQRDR*HQKVSR
Trigger: GCGTGAGACCTTTTGGTGCCAGCGGTCACGCTGCAC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACCAGGGCCATACTTTaGGGCCGGGACAATCCTACC +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLTRAIL*GRDNPT
Trigger: GGTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGT...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGTGCCCATCTTCCCTCTaGGGAGTCACGTTCCTCCCG +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLCPSSL*GVTFLP
Trigger: CGGGAGGAACGTGACTCCCCAGAGGGAAGATGGGCA...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGAACCATGTGTGGGGCTaGGACAGGTCAGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLNHVWG*DRSGWW
Trigger: CCACCACCCTGACCTGTCCCAGCCCCACACATGGTT...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGGTCCACACAGACAGTaGCAACAGCTAGCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLGPHRQ*QQLALG
Trigger: GCCCAGGGCTAGCTGTTGCCACTGTCTGTGTGGACC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCGCCTCAGGTGCAGCGTaGCCGCTGGCACCAAAAGGT +
Preference number: 2 (lower is better)
Translates to: AGISTEGLSASFDLFQSFASGAA*PLAPKG
Trigger: ACCTTTTGGTGCCAGCGGTCACGCTGCACCTGAGGC...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATGAGACAGGGAGGACCTaGTCCTGGAGTCCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANETGRT*SWSPSQ
Trigger: CTGGGAGGGACTCCAGGATCAGGTCCTCCCTGTCTC...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCGTCCATCGCCACCTTaGTGCATACAACCCGGACAA +
Preference number: 2 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLRPSPP*CIQPGQ
Trigger: TTGTCCGGGTTGTATGCATCAAGGTGGCGATGGACG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACATCCCCCAGGGGTCCTaGATCAAAGCTCTGGAGATG +
Preference number: 2 (lower is better)
Translates to: STGRKAGISTEGLSASFDIPQGS*IKALEM
Trigger: CATCTCCAGAGCTTTGATGCAGGACCCCTGGGGGAT...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCGATTTCTGCCGGCGCTaGTGTGCCGGTTCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: AGISTEGLSASFDLFQSFDFCRR*CAGSLV
Trigger: CACCAGGGAACCGGCACAGCAGCGCCGGCAGAAATC...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCCCCGGACAAGTTTACTaGTGTGATTTCTGCCGGCGC +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTPGQVY*CDFCRR
Trigger: GCGCCGGCAGAAATCACAGCAGTAAACTTGTCCGGG...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATTACCTGCATCGGGGATaGATTGGTGCGTGTTGGGCT +
Preference number: 2 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDYLHRG*IGACWA
Trigger: AGCCCAACACGCACCAATCCATCCCCGATGCAGGTA...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACAGGACACACACCCCTTaGTGGACCCGAAAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: STGRKAGISTEGLSASFDRTHTP*WTRKSF
Trigger: GAAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGTCCT...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATGCCTCATTTGGGCACTaGCCTGAGGCTGGCACTTGC +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANASFGH*PEAGTC
Trigger: GCAAGTGCCAGCCTCAGGGCAGTGCCCAAATGAGGC...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCAGGTCGTGTGGTGGTTaGGGGAGGTCGGGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: AGISTEGLSASFDLFQSFRSCGG*GRSGVF
Trigger: GAAGACACCCGACCTCCCCCAACCACCACACGACCT...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATTTTGCCTTGCTCGGCTaGGTCCTGCTGTGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANFALLG*VLLWLG
Trigger: CCCCAACCACAGCAGGACCCAGCCGAGCAAGGCAAA...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATATCCCAAGGCATCGCTaGCTGCAGCTGAGAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANIPRHR*LQLRGP
Trigger: AGGCCCTCTCAGCTGCAGCCAGCGATGCCTTGGGAT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCAGGCAGAACCATGTGTaGGGCTGGGACAGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: AGISTEGLSASFDLFQSFRQNHV*GWDRSG
Trigger: CCCTGACCTGTCCCAGCCCCACACATGGTTCTGCCT...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCACACACACCCCTTGCTaGACCCGAAAAAGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTTHTPC*TRKSFC
Trigger: ACAGAAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGGACAATCCTACCACATaGATATGTCACCATCCTGCC +
Preference number: 2 (lower is better)
Translates to: SEPAPGAERRPAYRLTARDNPTT*ICHHPA
Trigger: GGCAGGATGGTGACATATCCATGTGGTAGGATTGTC...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGCCTGCATCAAAGCTCTaGAGATGCAATTTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: SEPAPGAERRPAYRLTARPASKL*RCNFQQ
Trigger: CTGCTGGAAATTGCATCTCCAGAGCTTTGATGCAGG...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCGAGGAGGCACTAGTGTaGGGCAGCTACTTCACCTCC +
Preference number: 2 (lower is better)
Translates to: AGISTEGLSASFDLFQSFEEALV*GSYFTS
Trigger: GGAGGTGAAGTAGCTGCCCCACACTAGTGCCTCCTC...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCCCTGCATCAAAGCTCTaGAGATGCAATTTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: ELRFEEESRPPRVVGESTPASKL*RCNFQQ
Trigger: CTGCTGGAAATTGCATCTCCAGAGCTTTGATGCAGG...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATACTCCTTCCCAGCTCTaGGCCCAGTATGATGCCCAT +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANTPSQL*AQYDAH
Trigger: ATGGGCATCATACTGGGCCCAGAGCTGGGAAGGAGT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATATGTTCTCAGGAGACTaGAGCTGGGCACTCAGAACC +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANMFSGD*SWALRT
Trigger: GGTTCTGAGTGCCCAGCTTCAGTCTCCTGAGAACAT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATACAAGTTTACTGCTGTaGTTTCTGCCGGCGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANTSLLL*FLPALL
Trigger: CAGCAGCGCCGGCAGAAATCACAGCAGTAAACTTGT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGACTCGGGGGACCACCTaGTCTGCCCCTTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMTRGTT*SAPFPP
Trigger: GGGAGGGAAAGGGGCAGAGCAGGTGGTCCCCCGAGT...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGTGTTGGGCTGACCCCTaGTTCCCAGGCCTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMCWADP*FPGLGW
Trigger: CCACCCCAGGCCTGGGAAGCAGGGGTCAGCCCAACA...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATAAAGCCGGACACTTTTaGGATCCCACACAGCATCGA +
Preference number: 2 (lower is better)
Translates to: LSQTSIPISPPLTPQDANKAGHF*DPTQHR
Trigger: TCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGGAGACCCTCATTCCCTaGTCCCCCAGGGGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMETLIP*SPRGPA
Trigger: TGCAGGACCCCTGGGGGATCAGGGAATGAGGGTCTC...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR GCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGTGCCCTCCCAGTGGGTaGATCCCCAGGTGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMCPPSG*IPRWKV
Trigger: CACCTTCCACCTGGGGATGCACCCACTGGGAGGGCA...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR TCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGCGAGAGCTTTGTTCTTaGGTGGGTCTGCCTCGGGGG +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMRELCS*VGLPRG
Trigger: CCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCG...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGCCCAGAAGGTGGGCTTaGCCACAGCTCCCATCTGCT +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMPRRWA*PQLPSA
Trigger: AGCAGATGGGAGCTGTGGCCAAGCCCACCTTCTGGG...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGTGCCCATCTTCCCTCTaGGGAGTCACGTTCCTCCCG +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMCPSSL*GVTFLP
Trigger: CGGGAGGAACGTGACTCCCCAGAGGGAAGATGGGCA...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGATCCCAAGGCATCGCTaGCTGCAGCTGAGAGGGCCT +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMIPRHR*LQLRGP
Trigger: AGGCCCTCTCAGCTGCAGCCAGCGATGCCTTGGGAT...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGGAGAGATCCCCGAAGTaGGAACTGGGCCCCCATGGT +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMERSPK*ELGPHG
Trigger: ACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTC...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGGGCTTCTCAAACCTCTaGTTCCACTTTTCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMGFSNL*FHFSPF
Trigger: AAAAGGAGAAAAGTGGAACCAGAGGTTTGAGAAGCC...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTTGGGTCCTGCTGTGGTaGGGGACCAGGACTCGGGGG +
Preference number: 3 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPWVLLW*GTRTRG
Trigger: CCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCCA...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 72 bp GCACCTGGCAGCCTCCCAGACACCCCGGGCCGGTCCTaGTCTCCAGGCTTAGGGCTACAGCCACAACCACTG +
Preference number: 3 (lower is better)
Translates to: APGSLPDTPGRS*SPGLGLQPQPL
Trigger: CAGTGGTTGTGGCTGTAGCCCTAAGCCTGGAGAGCAGGACCGGCCCGGGGTGTCTGGGAGGCTGCCAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 72 bp CTCCCGCTCCGGGCCCGTTCCCACCCAAGGTCCCTTTaGAGAAGACTGGCACTGTCCTCCTCCAGCGGGAAC +
Preference number: 3 (lower is better)
Translates to: LPLRARSHPRSL*RRLALSSSSGN
Trigger: GTTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAACGGGCCCGGAGCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp GGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTaGCAGCTCCTGGCCTCAGTAGGAAGCGTGACTAGG +
Preference number: 3 (lower is better)
Translates to: GPPPTALIPYRS*QLLASVGSVTR
Trigger: CCTAGTCACGCTTCCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp CGTCTTTTGCCTTGCTCGGCTGGGTCCTGCTGTGGTTaGGGACCAGGACTCGGGGGACCACCTGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: RLLPCSAGSCCG*GPGLGGPPALP
Trigger: GGGCAGAGCAGGTGGTCCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCCAGCCGAGCAAGGCAAAAGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp GCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTaGCTGCAGCTGAGAGGGCCTCATTTGGGCACTGCC +
Preference number: 3 (lower is better)
Translates to: AASLPVSIPRHR*LQLRGPHLGTA
Trigger: GGCAGTGCCCAAATGAGGCCCTCTCAGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCAGGTCGGGTGTCTTCTaGCCCACAGTCCTGACCCTG +
Preference number: 3 (lower is better)
Translates to: KGPPPTALIPYRSWQLLARSGVF*PTVLTL
Trigger: CAGGGTCAGGACTGTGGGCAAGAAGACACCCGACCT...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp GGGCCCGTTCCCACCCAAGGTCCCTTTGCAGAAGACTaGCACTGTCCTCCTCCAGCGGGAACTGGGTGTGCC +
Preference number: 3 (lower is better)
Translates to: GPVPTQGPFAED*HCPPPAGTGCA
Trigger: GGCACACCCAGTTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAACGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR TCA 72 bp ACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTaGCTGCTCCCAGCCTCTCCCAAGGACTTAGGAGCC +
Preference number: 3 (lower is better)
Translates to: TQPDNGLAQAAQ*LLPASPKDLGA
Trigger: GGCTCCTAAGTCCTTGGGAGAGGCTGGGAGCAGTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp TTTCTCAGGACACCAGAGCTGGGAGCACTGGTCAGGTaGGGGCCTCAGGTGCAGCGTGACCGCTGGCACCAA +
Preference number: 3 (lower is better)
Translates to: FLRTPELGALVR*GPQVQRDRWHQ
Trigger: TTGGTGCCAGCGGTCACGCTGCACCTGAGGCCCCCACCTGACCAGTGCTCCCAGCTCTGGTGTCCTGAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGACCTGCGGGCATTCCTaGTCTTCCCCCTGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: GAERRPAYRLTARRPLGWTCGHS*SSPCPS
Trigger: GCTGGGGCAGGGGGAAGACAAGGAATGCCCGCAGGT...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCCTGCGTCTTTTGCCTaGCTCGGCTGGGTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCPASFA*LGWVLL
Trigger: CAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAGG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCCAGTCCTGCGTCTTTaGCCTTGCTCGGCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCPVLRL*PCSAGS
Trigger: GGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTGG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTTGCATCGGGGATGGATaGGTGCGTGTTGGGCTGACC +
Preference number: 3 (lower is better)
Translates to: CERDPRSGNWAPMVPSASCIGDG*VRVGLT
Trigger: GGTCAGCCCAACACGCACCAATCCATCCCCGATGCA...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTCAAAGCCGGACACTTTaGGGATCCCACACAGCATCG +
Preference number: 3 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSQSRTL*GSHTAS
Trigger: CGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTTG...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGCCAGTCCTGCGTCTTTaGCCTTGCTCGGCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: GAERRPAYRLTARRPLGWPVLRL*PCSAGS
Trigger: GGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTGG...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 72 bp AGACTGGCACTGTCCTCCTCCAGCGGGAACTGGGTGTaGCCTCAGCAAGACTCTGCCCCCTCCCATCCTCAT +
Preference number: 3 (lower is better)
Translates to: RLALSSSSGNWV*PQQDSAPSHPH
Trigger: ATGAGGATGGGAGGGGGCAGAGTCTTGCTGAGGGCACACCCAGTTCCCGCTGGAGGAGGACAGTGCCAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 72 bp CCCGGACAAGTTTACTGCTGTGATTTCTGCCGGCGCTaGTGTGCCGGTTCCCTGGTGCTGCACAGCCACGCA +
Preference number: 3 (lower is better)
Translates to: PGQVYCCDFCRR*CAGSLVLHSHA
Trigger: TGCGTGGCTGTGCAGCACCAGGGAACCGGCACAGCAGCGCCGGCAGAAATCACAGCAGTAAACTTGTCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp GCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTaGGGTGGAGACCCTCATTCCCTGATCCCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: AGLHIDSLQGDP*GGDPHSLIPQG
Trigger: CCCCTGGGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp TGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAACTaGGTGTGCCCTCAGCAAGACTCTGCCCCCTCCCAT +
Preference number: 3 (lower is better)
Translates to: CRRLALSSSSGN*VCPQQDSAPSH
Trigger: ATGGGAGGGGGCAGAGTCTTGCTGAGGGCACACCCAGTTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAAGAGGTCGTGTGGTGGTaGGGGGAGGTCGGGTGTCTT +
Preference number: 3 (lower is better)
Translates to: FPPKVPLQKTGTVLLQREEVVWW*GEVGCL
Trigger: AAGACACCCGACCTCCCCCAACCACCACACGACCTC...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCAAAGCCGGACACTTTaGGGATCCCACACAGCATCG +
Preference number: 3 (lower is better)
Translates to: CERDPRSGNWAPMVPSASQSRTL*GSHTAS
Trigger: CGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTTG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTTGGGTCCTGCTGTGGTaGGGGACCAGGACTCGGGGG +
Preference number: 3 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLWVLLW*GTRTRG
Trigger: CCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCCA...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGCCCATGCGGGATGGCTaGAAGGGTTTCTCAGGACAC +
Preference number: 3 (lower is better)
Translates to: GAERRPAYRLTARRPLGWPMRDG*KGFSGH
Trigger: GTGTCCTGAGAAACCCTTCAAGCCATCCCGCATGGG...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCACGTCCATCGCCACCTaGATGCATACAACCCGGACA +
Preference number: 3 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCTSIAT*MHTTRT
Trigger: TGTCCGGGTTGTATGCATCAAGGTGGCGATGGACGT...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR TCA 72 bp GCTGGCAGATTCAGGCCCTCCCTGCGAGCTGAGGTTTaGAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGA +
Preference number: 3 (lower is better)
Translates to: AGRFRPSLRAEV*RGEQTTQSSGR
Trigger: TCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTCGCAGGGAGGGCCTGAATCTGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp AAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTaGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTG +
Preference number: 3 (lower is better)
Translates to: KGQGLEVRSCGG*GRSGVFLPTVL
Trigger: CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp AGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTaGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCAC +
Preference number: 3 (lower is better)
Translates to: SIERSRPRSEVV*WLGEVGCLLAH
Trigger: GTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp GGGTTAGGGCAAGCATTAGCAGCAGGGGCATGGCCCTaGGAAGCACCTGGACCCCAGAACATAAGACAGGAG +
Preference number: 3 (lower is better)
Translates to: GLGQALAAGAWP*EAPGPQNIRQE
Trigger: CTCCTGTCTTATGTTCTGGGGTCCAGGTGCTTCCCAGGGCCATGCCCCTGCTGCTAATGCTTGCCCTAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGTCGAGAGCTTTGTTCTaGAGTGGGTCTGCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: HSIERSRPRSEVVWWLGESRALF*SGSASG
Trigger: CCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGA...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCGAGGACACACACCCCTaGCTGGACCCGAAAAAGCTT +
Preference number: 3 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPEDTHP*LDPKKL
Trigger: AAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGTCCTC...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCGACCAGGGCCATACTTaGGGGCCGGGACAATCCTAC +
Preference number: 3 (lower is better)
Translates to: ELRFEEESRPPRVVGESTDQGHT*GPGQSY
Trigger: GTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGTC...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 72 bp TGCATACAACCCGGACAAGTTTACTGCTGTGATTTCTaGCGGCGCTGCTGTGCCGGTTCCCTGGTGCTGCAC +
Preference number: 3 (lower is better)
Translates to: CIQPGQVYCCDF*RRCCAGSLVLH
Trigger: GTGCAGCACCAGGGAACCGGCACAGCAGCGCCGGCAGAAATCACAGCAGTAAACTTGTCCGGGTTGTATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR GCA 72 bp CCTCCTCTGTCAAAGGGGCAAGATAATGGCTCCCATTaGCGGGCTGCTATACAGTGCTCAGGGCCACAGTGC +
Preference number: 3 (lower is better)
Translates to: PPLSKGQDNGSH*RAAIQCSGPQC
Trigger: GCACTGTGGCCCTGAGCACTGTATAGCAGCCCGGCAATGGGAGCCATTATCTTGCCCCTTTGACAGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp ATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTaGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGT +
Preference number: 3 (lower is better)
Translates to: IERSRPRSEVVW*LGEVGCLLAHS
Trigger: ACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp CGAGGGGCTGATCAGCCCATCAAAGCCGGACACTTTTaGGATCCCACACAGCATCGAAAGGTCAAGGCCTCG +
Preference number: 3 (lower is better)
Translates to: RGADQPIKAGHF*DPTQHRKVKAS
Trigger: CGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTTGATGGGCTGATCAGCCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp TTTCCAGCAGGGGCTCCCCTGACCAGGGCCATACTTTaGGGCCGGGACAATCCTACCACATGGATATGTCAC +
Preference number: 3 (lower is better)
Translates to: FPAGAPLTRAIL*GRDNPTTWICH
Trigger: GTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGTCAGGGGAGCCCCTGCTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACTCGAGAGCTTTGTTCTaGAGTGGGTCTGCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: STGRKAGISTEGLSASFDSRALF*SGSASG
Trigger: CCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGA...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTTCGAGAGCTTTGTTCTaGAGTGGGTCTGCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGSRALF*SGSASG
Trigger: CCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGA...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCTCGAGAGCTTTGTTCTaGAGTGGGTCTGCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: PYFGAGTILPHGYVTILPSRALF*SGSASG
Trigger: CCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGA...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGACCAGGGCCATACTTaGGGGCCGGGACAATCCTAC +
Preference number: 3 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLDQGHT*GPGQSY
Trigger: GTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGTC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR TCA 72 bp CCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTaGGCCAGACCAGCATTCCCATTTCACCACCCCTTA +
Preference number: 3 (lower is better)
Translates to: PSIQRALMPTTS*ARPAFPFHHPL
Trigger: TAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CCA 72 bp AGGGCCATACTTTGGGGCCGGGACAATCCTACCACATaGATATGTCACCATCCTGCCCATGCGGGATGGCTT +
Preference number: 3 (lower is better)
Translates to: RAILWGRDNPTT*ICHHPAHAGWL
Trigger: AAGCCATCCCGCATGGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCCTGAGAGGGCCTCATTaGGGCACTGCCCTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: AGISTEGLSASFDLFQSFLRGPH*GTALRL
Trigger: CAGCCTCAGGGCAGTGCCCAAATGAGGCCCTCTCAG...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCACGTCCATCGCCACCTaGATGCATACAACCCGGACA +
Preference number: 3 (lower is better)
Translates to: ELRFEEESRPPRVVGESTTSIAT*MHTTRT
Trigger: TGTCCGGGTTGTATGCATCAAGGTGGCGATGGACGT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR TCA 72 bp ACCTTGATGCATACAACCCGGACAAGTTTACTGCTGTaGTTTCTGCCGGCGCTGCTGTGCCGGTTCCCTGGT +
Preference number: 3 (lower is better)
Translates to: TLMHTTRTSLLL*FLPALLCRFPG
Trigger: ACCAGGGAACCGGCACAGCAGCGCCGGCAGAAATCACAGCAGTAAACTTGTCCGGGTTGTATGCATCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCTGTGTCTCGAGAGCTTaGTTCTTGAGTGGGTCTGCC +
Preference number: 3 (lower is better)
Translates to: PYFGAGTILPHGYVTILPCVSRA*FLSGSA
Trigger: GGCAGACCCACTCAAGAACAAAGCTCTCGAGACACA...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCAGGTCGGGTGTCTTCTaGCCCACAGTCCTGACCCTG +
Preference number: 3 (lower is better)
Translates to: AGISTEGLSASFDLFQSFRSGVF*PTVLTL
Trigger: CAGGGTCAGGACTGTGGGCAAGAAGACACCCGACCT...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATGAAACGTCAAGGGGTTaGACTGAGAGGACACACACC +
Preference number: 3 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDETSRG*TERTHT
Trigger: GGTGTGTGTCCTCTCAGTCAAACCCCTTGACGTTTC...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTGAAACGTCAAGGGGTTaGACTGAGAGGACACACACC +
Preference number: 3 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLETSRG*TERTHT
Trigger: GGTGTGTGTCCTCTCAGTCAAACCCCTTGACGTTTC...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR-3UTR CAA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGCCTGCGTCTTTTGCCTaGCTCGGCTGGGTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMPASFA*LGWVLL
Trigger: CAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAGG...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR TCA 72 bp TTTCAGAGTTATGAACCAAATCGCCTTCATGAGAGATaGCGAATCAGATGCTACATAGTGGGGGAGGCGGCA +
Preference number: 3 (lower is better)
Translates to: FQSYEPNRLHER*RIRCYIVGEAA
Trigger: TGCCGCCTCCCCCACTATGTAGCATCTGATTCGTCATCTCTCATGAAGGCGATTTGGTTCATAACTCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTAGGTACCGCCGCGCCTaGGAGTCACCCGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPRYRRA*ESPAAA
Trigger: AGCGGCCGCGGGTGACTCCCAGGCGCGGCGGTACCT...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR TCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTGCCACGCACTCCCCATaGGTGGGCCTGCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPATHSP*VGLPSI
Trigger: AATGCTGGGCAGGCCCACTCATGGGGAGTGCGTGGC...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTTCTGCCACTCTGCCCTaGACCCAGAGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPSATLP*TQRQRW
Trigger: CCAGCGCTGCCTCTGGGTGCAGGGCAGAGTGGCAGA...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTGAGACCCTCATTCCCTaGTCCCCCAGGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPETLIP*SPRGPA
Trigger: TGCAGGACCCCTGGGGGATCAGGGAATGAGGGTCTC...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTTCTCCTCTGCCACTCTaGCCTGCACCCAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPSPLPL*PAPRGS
Trigger: GCTGCCTCTGGGTGCAGGGCAGAGTGGCAGAGGAGA...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTGGGCTTCCCAGAAGGTaGGCTTGGCCACAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPGLPRR*AWPQLP
Trigger: TGGGAGCTGTGGCCAAGCCCACCTTCTGGGAAGCCC...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTCGCCTGGAGGAAGCCTaGCCAGGGCCGCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAARLEEA*PGPQPC
Trigger: GCAGGGCTGCGGCCCTGGGCAGGCTTCCTCCAGGCG...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGAGGTACCGCCGCGCCTaGGAGTCACCCGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRRYRRA*ESPAAA
Trigger: AGCGGCCGCGGGTGACTCCCAGGCGCGGCGGTACCT...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR TCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTTTATTTACGGCTCGGTaGGACGACGCTGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPLFTAR*DDAGRW
Trigger: CCAGCGTCCAGCGTCGTCTCACCGAGCCGTAAATAA...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTCGGGCTGCTATACAGTaGTCAGGGCCACAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPRAAIQ*SGPQCS
Trigger: ACTGCACTGTGGCCCTGAGCACTGTATAGCAGCCCG...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTCCAGGGCCGCAGCCCTaGCCCCAAAGACCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAPGPQP*PQRPQD
Trigger: GTCCTGGGGTCTTTGGGGGCAGGGCTGCGGCCCTGG...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCGCCTGGAGGAAGCCTaGCCAGGGCCGCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASRLEEA*PGPQPC
Trigger: GCAGGGCTGCGGCCCTGGGCAGGCTTCCTCCAGGCG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCGCAGGTGGGGGCCCTTaGGAGCTCTGGGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAAGGGP*ELWEAP
Trigger: AGGTGCCTCCCAGAGCTCCCAAGGGCCCCCACCTGC...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCGCAGGGGCATGGCCCTaGGAAGCACCTGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAAGAWP*EAPGPQ
Trigger: CTGGGGTCCAGGTGCTTCCCAGGGCCATGCCCCTGC...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTGCGCAAGCCGCGCAGTaGCTGCTCCCAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASAQAAQ*LLPASP
Trigger: GGGAGAGGCTGGGAGCAGTCACTGCGCGGCTTGCGC...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTCGTCCATCGCCACCTTaGTGCATACAACCCGGACAA +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPRPSPP*CIQPGQ
Trigger: TTGTCCGGGTTGTATGCATCAAGGTGGCGATGGACG...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTGTTCTTGAGTGGGTCTaGCTCGGGGGCTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPVLEWV*LGGFRG
Trigger: TCCTCTAAAGCCCCCGAGGCAGACCCACTCAAGAAC...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGGGGACCCACTCACTGTaGGCATCCCGCTGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRGTHSL*ASRCGG
Trigger: TCCCCCGCAGCGGGATGCGCACAGTGAGTGGGTCCC...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCGTGCTCTACGCCAGGTaGCAAGGGCAGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAVLYAR*QGQASQ
Trigger: CTGGCTGGCCTGCCCTTGGCACCTGGCGTAGAGCAC...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTCCCGGACAAGTTTACTaGTGTGATTTCTGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPPGQVY*CDFCRR
Trigger: GCGCCGGCAGAAATCACAGCAGTAAACTTGTCCGGG...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGCCAGGGTGGCCGGGGTaGCAAGGCCGGTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLPGWPG*QGRCRC
Trigger: GCAACGGCACCGGCCTTGCCACCCCGGCCACCCTGG...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCCCCCGAAGTGGGAACTaGGCCCCCATGGTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAPRSGN*APMVPS
Trigger: ACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGG...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTGGGCTGGGCGGAAGCTaGCAGGGCTGTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAGLGGS*QGCPQG
Trigger: TCCCTGTGGACAGCCCTGCCAGCTTCCGCCCAGCCC...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGTGGTGCGTGTTGGGCTaGCCCCTGCTTCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRWCVLG*PLLPRP
Trigger: AGGCCTGGGAAGCAGGGGTCAGCCCAACACGCACCA...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGGCGCAAGCCGCGCAGTaGCTGCTCCCAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLAQAAQ*LLPASP
Trigger: GGGAGAGGCTGGGAGCAGTCACTGCGCGGCTTGCGC...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGCGCAAGCCGCGCAGTaGCTGCTCCCAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCAQAAQ*LLPASP
Trigger: GGGAGAGGCTGGGAGCAGTCACTGCGCGGCTTGCGC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTGCCACGCACTCCCCATaGGTGGGCCTGCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAATHSP*VGLPSI
Trigger: AATGCTGGGCAGGCCCACTCATGGGGAGTGCGTGGC...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTACAAGTTTACTGCTGTaGTTTCTGCCGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPTSLLL*FLPALL
Trigger: CAGCAGCGCCGGCAGAAATCACAGCAGTAAACTTGT...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCAGGGGCGTCATGGCTaGAGGCAGGAGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASQGRHG*RQEGSV
Trigger: CACGCTGCCCTCCTGCCTGCAGCCATGACGCCCCTG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTTGTTGGGCTGACCCCTaGTTCCCAGGCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAACWADP*FPGLGW
Trigger: CCACCCCAGGCCTGGGAAGCAGGGGTCAGCCCAACA...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGACCCCGGGCCGGTCCTaGTCTCCAGGCTTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRTPGRS*SPGLGL
Trigger: TAGCCCTAAGCCTGGAGAGCAGGACCGGCCCGGGGT...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTTGGTGGACGCGTGCTTaGAGTAGCCATCATACACAG +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPWWTRA*SSHHTQ
Trigger: CTGTGTATGATGGCTACTCCAAGCACGCGTCCACCA...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGCCAGGGTGGCCGGGGTaGCAAGGCCGGTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWPGWPG*QGRCRC
Trigger: GCAACGGCACCGGCCTTGCCACCCCGGCCACCCTGG...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCTCCCCTGCAGGGGGTaGCTCCAACTCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCLPCRG*LQLGPG
Trigger: GCCAGGCCCGAGTTGGAGCCACCCCCTGCAGGGGAG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTTGCCAGCTTCAGGCCTaGTGCCCTCCCCGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASCQLQA*CPPREG
Trigger: CCCCTCACGGGGAGGGCACCAGGCCTGAAGCTGGCA...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTGGAGCACTGGTCAGGTaGGGGCCTCAGGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSGALVR*GPQVQR
Trigger: ACGCTGCACCTGAGGCCCCCACCTGACCAGTGCTCC...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTGCTGTGCCGGTTCCCTaGTGCTGCACAGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAAVPVP*CCTATH
Trigger: GTGCGTGGCTGTGCAGCACCAGGGAACCGGCACAGC...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CAA 72 bp CCCAGCCTGTGCGCGCATCCCCCAGTCCTGCGTCTTTaGCCTTGCTCGGCTGGGTCCTGCTGTGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSLCAHPPVLRL*PCSAGSCCGWG
Trigger: TCCCCAACCACAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTGGGGGATGCGCGCACAGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CAA 72 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTaGCGCAAGCCGCGCAGTGACTGCTCCCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMG*RKPRSDCSQPL
Trigger: GAGAGGCTGGGAGCAGTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCGCACGCAGGACTTACTaGCCTTCATCCTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAARRTY*PSSWWG
Trigger: CCCCCACCAGGATGAAGGTCAGTAAGTCCTGCGTGC...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGGCCTCAGGTGCAGCGTaGCCGCTGGCACCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRASGAA*PLAPKG
Trigger: ACCTTTTGGTGCCAGCGGTCACGCTGCACCTGAGGC...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTGAGACCCTCATTCCCTaGTCCCCCAGGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSETLIP*SPRGPA
Trigger: TGCAGGACCCCTGGGGGATCAGGGAATGAGGGTCTC...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCGCCCTCCCTGCGAGCTaGGGTTTGAAGAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAALPAS*GLKRRA
Trigger: TGCTCTCCTCTTCAAACCTCAGCTCGCAGGGAGGGC...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGACGTGGGGCCGGCCCTaGCTCCCGGAGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGTWGRP*LPELLV
Trigger: GACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGT...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCACGTGGGGCCGGCCCTaGCTCCCGGAGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPTWGRP*LPELLV
Trigger: GACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGT...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGCTCCCATCTGCTCAGTaGTCCCTGCCTGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRLPSAQ*SLPDWA
Trigger: GGCCCAGTCAGGCAGGGAGCACTGAGCAGATGGGAG...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGCATGGCCCTAGCTCCTaGCAGCTTCAGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRHGPSS*QLQAWC
Trigger: GCACCAGGCCTGAAGCTGGCAGGAGCTAGGGCCATG...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGTCTCACGCCCCCGAATaGCCCATTCACAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRSHAPE*PIHSRG
Trigger: GCCCCTGCTGTGAATGGGGCATTCGGGGGCGTGAGA...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTGATTTCTGCCGGCGCTaGTGTGCCGGTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSDFCRR*CAGSLV
Trigger: CACCAGGGAACCGGCACAGCAGCGCCGGCAGAAATC...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCCAGGGTGGCCGGGGTaGCAAGGCCGGTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHPGWPG*QGRCRC
Trigger: GCAACGGCACCGGCCTTGCCACCCCGGCCACCCTGG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGCCAGGGTGGCCGGGGTaGCAAGGCCGGTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGPGWPG*QGRCRC
Trigger: GCAACGGCACCGGCCTTGCCACCCCGGCCACCCTGG...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGGACACCAGAGCTaGGAGCACTGGTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLASGHQS*EHWSGG
Trigger: CCCACCTGACCAGTGCTCCCAGCTCTGGTGTCCTGA...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTCACCCAACCCGACAATaGGCTTGCGCAAGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSHPTRQ*ACASRA
Trigger: TGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTG...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGGGAACTGGGCCCCCATaGTGCCCAGTGCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLGTGPP*CPVPLP
Trigger: GGGGAGAGGCACTGGGCACCATGGGGGCCCAGTTCC...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCGGCAGCGCATGGGGTTaGAGCAGTTGTCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAGSAWG*SSCLRC
Trigger: ACAACGGAGACAACTGCTTCAACCCCATGCGCTGCC...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGCCACCAGGATCAGGGTaGGCAGGGGCGTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLPPGSG*AGASWL
Trigger: CAGCCATGACGCCCCTGCTCACCCTGATCCTGGTGG...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTCCACCAGGATCAGGGTaGGCAGGGGCGTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPPPGSG*AGASWL
Trigger: CAGCCATGACGCCCCTGCTCACCCTGATCCTGGTGG...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTGCACGCAGGACTTACTaGCCTTCATCCTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSARRTY*PSSWWG
Trigger: CCCCCACCAGGATGAAGGTCAGTAAGTCCTGCGTGC...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGAGGGTGAGGCAGGGTaGGCTGGGTGCGAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCEGEAG*AGCEGV
Trigger: TACACCCTCGCACCCAGCTCACCCTGCCTCACCCTC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGACCCTGGGCATGGCTaGGGAGGTCGCAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCDPGHG*GGRREC
Trigger: ACACTCCCTGCGACCTCCTCAGCCATGCCCAGGGTC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCCCATGCGGGATGGCTTaGAGGGTTTCTCAGGACACC +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAPCGMA*RVSQDT
Trigger: GGTGTCCTGAGAAACCCTTCAAGCCATCCCGCATGG...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTGCTCTGGGCCCAGTATaGTGCCCATCTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAALGPV*CPSSLW
Trigger: CCAGAGGGAAGATGGGCATCATACTGGGCCCAGAGC...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTCCAAGCAGCCACTCCTaGGTCACTCGGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSPSSHS*VTRACP
Trigger: TGGACATGCCCGAGTGACTCAGGAGTGGCTGCTTGG...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTACGTGGGGCCGGCCCTaGCTCCCGGAGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGTWGRP*LPELLV
Trigger: GACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGT...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTGGGGGTGTAGTAGGTaGGCGTGGTCATGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAWGCSR*AWSCSR
Trigger: CCTACTGCATGACCACGCGCACCTACTACACCCCCA...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTACTCGGGGGACCACCTaGTCTGCCCCTTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPTRGTT*SAPFPP
Trigger: GGGAGGGAAAGGGGCAGAGCAGGTGGTCCCCCGAGT...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTCGCATCCCCCAGTCCTaGGTCTTTTGCCTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSRIPQS*VFCLAR
Trigger: CCGAGCAAGGCAAAAGACGCAGGACTGGGGGATGCG...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGACCCGACAATGGGCTTaGGCAAGCCGCGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRTRQWA*ASRAVT
Trigger: AGTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGT...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTGTGCCGGTTCCCTGGTaGTGCACAGCCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPVPVPW*CTATHS
Trigger: GGAGTGCGTGGCTGTGCAGCACCAGGGAACCGGCAC...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGGTGGGAGAAGCGGCTaGACTGTGGTGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCGGRSG*TVVQGV
Trigger: CACCCCCTGCACCACAGTGCAGCCGCTTCTCCCACC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTGGGGACCCTCGGTTCTaGGAGAGAGATCCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSGDPRF*ERDPRS
Trigger: ACTTCGGGGATCTCTCTCGCAGAACCGAGGGTCCCC...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTCGCCTGGAGGAAGCCTaGCCAGGGCCGCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGRLEEA*PGPQPC
Trigger: GCAGGGCTGCGGCCCTGGGCAGGCTTCCTCCAGGCG...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTCCCAGAAGGTGGGCTTaGCCACAGCTCCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAPRRWA*PQLPSA
Trigger: AGCAGATGGGAGCTGTGGCCAAGCCCACCTTCTGGG...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTGGGCTTCCCAGAAGGTaGGCTTGGCCACAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASGLPRR*AWPQLP
Trigger: TGGGAGCTGTGGCCAAGCCCACCTTCTGGGAAGCCC...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGCTCCCCTGCAGGGGGTaGCTCCAACTCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGLPCRG*LQLGPG
Trigger: GCCAGGCCCGAGTTGGAGCCACCCCCTGCAGGGGAG...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTGGGTCCTGCTGTGGTTaGGGACCAGGACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPGSCCG*GPGLGG
Trigger: TCCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCC...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACGGCCACGAGAGGGTaGCATGCTCCGCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLTATRG*HAPPSH
Trigger: GTGGGAAGGCGGAGCATGCCACCCTCTCGTGGCCGT...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTCTGGGGTGGGGTCCCTaGGAGTCCACACACCCAGCT +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPLGWGP*ESTHPA
Trigger: AGCTGGGTGTGTGGACTCCCAGGGACCCCACCCCAG...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTGGATTGGTGCGTGTTaGGCTGACCCCTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAWIGAC*ADPCFP
Trigger: TGGGAAGCAGGGGTCAGCCCAACACGCACCAATCCA...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGGGAGCACTGGTCAGGTaGGGGCCTCAGGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLGALVR*GPQVQR
Trigger: ACGCTGCACCTGAGGCCCCCACCTGACCAGTGCTCC...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCACCAGGGCCATACTTTaGGGCCGGGACAATCCTACC +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLATRAIL*GRDNPT
Trigger: GGTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGT...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTCCTGCATCAAAGCTCTaGAGATGCAATTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPPASKL*RCNFQQ
Trigger: CTGCTGGAAATTGCATCTCCAGAGCTTTGATGCAGG...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTGCTGGCACTTGCAGGTaGGGGCCCTTGGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPAGTCR*GPLGAL
Trigger: CAGAGCTCCCAAGGGCCCCCACCTGCAAGTGCCAGC...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTAGGCAGAACCATGTGTaGGGCTGGGACAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAARQNHV*GWDRSG
Trigger: CCCTGACCTGTCCCAGCCCCACACATGGTTCTGCCT...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGGAGAGATCCCCGAAGTaGGAACTGGGCCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRERSPK*ELGPHG
Trigger: ACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTC...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCCACCGGCAGAAAAGCTaGCATATCCACCGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAHRQKS*HIHRGP
Trigger: AGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTG...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGTCTTGCCCACAGTCCTaGCCCTGGGCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLSCPQS*PWAWLR
Trigger: CCTCAGCCATGCCCAGGGTCAGGACTGTGGGCAAGA...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGCAGCAGGGGCTCCCCTaGCCAGGGCCATACTTTGGG +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWQQGLP*PGPYFG
Trigger: CCCAAAGTATGGCCCTGGTCAGGGGAGCCCCTGCTG...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGAGACAGGGAGGACCTaGTCCTGGAGTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCETGRT*SWSPSQ
Trigger: CTGGGAGGGACTCCAGGATCAGGTCCTCCCTGTCTC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGTCGCCGGTAGGTGCCTaGCTGAGTCTAATCGTAGGC +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRSPVGA*LSLIVG
Trigger: GCCTACGATTAGACTCAGGCAGGCACCTACCGGCGA...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR GCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCACGTGGGGCCGGCCCTaGCTCCCGGAGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTTWGRP*LPELLV
Trigger: GACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCAGGGGCGTCATGGCTaGAGGCAGGAGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHQGRHG*RQEGSV
Trigger: CACGCTGCCCTCCTGCCTGCAGCCATGACGCCCCTG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGCAAGGCCGGTGCCGTTaGAGAGGTCGTACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLQGRCR*RGRTGS
Trigger: GCTGCCAGTACGACCTCTGCAACGGCACCGGCCTTG...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCAAGGCCGGTGCCGTTaGAGAGGTCGTACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCQGRCR*RGRTGS
Trigger: GCTGCCAGTACGACCTCTGCAACGGCACCGGCCTTG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGGGTGGCAAGGCCGGTaGCGTTGCAGAGGTCGTACT +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCGWQGR*RCRGRT
Trigger: AGTACGACCTCTGCAACGGCACCGGCCTTGCCACCC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCCCAACCCCCAGCCTGTaGGCGCATCCCCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGPTPSL*AHPPVL
Trigger: CAGGACTGGGGGATGCGCGCACAGGCTGGGGGTTGG...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTGGTGGGGGCCTCAGGTaGAGCGTGACCGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGGGGLR*SVTAGT
Trigger: GGTGCCAGCGGTCACGCTGCACCTGAGGCCCCCACC...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTAGCGGGAACTGGGTGTaGCCTCAGCAAGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASSGNWV*PQQDSA
Trigger: GGCAGAGTCTTGCTGAGGGCACACCCAGTTCCCGCT...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGGTGCTCTACGCCAGGTaGCAAGGGCAGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWVLYAR*QGQASQ
Trigger: CTGGCTGGCCTGCCCTTGGCACCTGGCGTAGAGCAC...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGCCGGTTCCCTGGTGCTaGACAGCCACGCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWPVPWC*TATHSP
Trigger: TGGGGAGTGCGTGGCTGTGCAGCACCAGGGAACCGG...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGTCTCCCCCTCTCCTCTaGCACTCTGCCCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLSPPLL*HSALHP
Trigger: TGGGTGCAGGGCAGAGTGGCAGAGGAGAGGGGGAGA...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCACTGGGCCCCCATGGTaGCCAGTGCCTCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGTGPPW*PVPLPL
Trigger: GAGGGGGAGAGGCACTGGGCACCATGGGGGCCCAGT...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTCCAGGGCCGCAGCCCTaGCCCCAAAGACCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGPGPQP*PQRPQD
Trigger: GTCCTGGGGTCTTTGGGGGCAGGGCTGCGGCCCTGG...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTGGATCCAACTCAGGGTaGTGCGCAGAGGACGTGGGG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPGSNSG*CAEDVG
Trigger: CCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCC...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTAGGGCAGCGTGGGAGTaGGGAGGTCAACAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASRAAWE*GGQQQL
Trigger: TAGCTGCTGTTGACCTCCCCACTCCCACGCTGCCCT...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTTTGCAGAGGTCGTACTaGCAGCAGGAGGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSLQRSY*QQEVVD
Trigger: GTCCACCACCTCCTGCTGCCAGTACGACCTCTGCAA...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCTGCCAGCTTCAGGCCTaGTGCCCTCCCCGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGCQLQA*CPPREG
Trigger: CCCCTCACGGGGAGGGCACCAGGCCTGAAGCTGGCA...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCTGCAAGGAGACCCCTaGGGTGGAGACCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASLQGDP*GGDPHS
Trigger: GGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTCCCTTTGCAGAAGACTaGCACTGTCCTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAPFAED*HCPPPA
Trigger: CGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGG...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGAGGCCCACCCTGTGCTaGCAGCAACTCCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLRPTLC*QQLLPS
Trigger: GCTGGGAAGGAGTTGCTGCCAGCACAGGGTGGGCCT...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATGCAGGTGGGGGCCCTTaGGAGCTCTGGGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHAGGGP*ELWEAP
Trigger: AGGTGCCTCCCAGAGCTCCCAAGGGCCCCCACCTGC...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTAGTCCCTCCCAGCCCTaGCTGAGGAAGCCACCCAAC +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPSPSQP*LRKPPN
Trigger: GTTGGGTGGCTTCCTCAGCCAGGGCTGGGAGGGACT...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTAGGAACCCCAGCTGGTaGGAGAAGCGGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASRNPSW*EKRLHC
Trigger: ACAGTGCAGCCGCTTCTCCCACCAGCTGGGGTTCCT...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGCCAAGGAACCCCAGCTaGTGGGAGAAGCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLPRNPS*WEKRLH
Trigger: GTGCAGCCGCTTCTCCCACCAGCTGGGGTTCCTTGG...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATGGAACTGGGCCCCCATaGTGCCCAGTGCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHGTGPP*CPVPLP
Trigger: GGGGAGAGGCACTGGGCACCATGGGGGCCCAGTTCC...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTGGTCCACACAGACAGTaGCAACAGCTAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASGPHRQ*QQLALG
Trigger: GCCCAGGGCTAGCTGTTGCCACTGTCTGTGTGGACC...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCGCCCTGGGAAGCACCTaGACCCCAGAACATAAGACA +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAALGST*TPEHKT
Trigger: TGTCTTATGTTCTGGGGTCCAGGTGCTTCCCAGGGC...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCCCGTGCCGCATCGCCTaGTGCTCACCGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLPCRIA*CSPQAQ
Trigger: CTGGGCCTGCGGTGAGCATCAGGCGATGCGGCACGG...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614491.1
CDS-3UTR TCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGCCACCAGGATCAGGGTaGGCAGGGGCGTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEPPGSG*AGASWL
Trigger: CAGCCATGACGCCCCTGCTCACCCTGATCCTGGTGG...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTCGAGAGCTTTGTTCTTaGGTGGGTCTGCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPRELCS*VGLPRG
Trigger: CCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCG...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCGAGGGTGAGGCAGGGTaGGCTGGGTGCGAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPEGEAG*AGCEGV
Trigger: TACACCCTCGCACCCAGCTCACCCTGCCTCACCCTC...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGGACCCTGGGCATGGCTaGGGAGGTCGCAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGDPGHG*GGRREC
Trigger: ACACTCCCTGCGACCTCCTCAGCCATGCCCAGGGTC...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCGTCAAGGCCTCGAAGTaGGGTCGTGTGGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCVKASK*GRVVVG
Trigger: CCCAACCACCACACGACCTCACTTCGAGGCCTTGAC...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTCGCATCCCCCAGTCCTaGGTCTTTTGCCTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPRIPQS*VFCLAR
Trigger: CCGAGCAAGGCAAAAGACGCAGGACTGGGGGATGCG...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCCCAACCCCCAGCCTGTaGGCGCATCCCCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVPTPSL*AHPPVL
Trigger: CAGGACTGGGGGATGCGCGCACAGGCTGGGGGTTGG...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGGCTCCCTGGGCTACCTaGATCGGGGATGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLAPWAT*IGDGLV
Trigger: CACCAATCCATCCCCGATGCAGGTAGCCCAGGGAGC...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTGCTCCCTGGGCTACCTaGATCGGGGATGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPAPWAT*IGDGLV
Trigger: CACCAATCCATCCCCGATGCAGGTAGCCCAGGGAGC...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGTGGGGGCCTCAGGTaGAGCGTGACCGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLGGGLR*SVTAGT
Trigger: GGTGCCAGCGGTCACGCTGCACCTGAGGCCCCCACC...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCAGCGGGAACTGGGTGTaGCCTCAGCAAGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCSGNWV*PQQDSA
Trigger: GGCAGAGTCTTGCTGAGGGCACACCCAGTTCCCGCT...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTCACCCAAGGTCCCTTTaGAGAAGACTGGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAHPRSL*RRLALS
Trigger: GGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTG...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATGTGCTCTACGCCAGGTaGCAAGGGCAGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHVLYAR*QGQASQ
Trigger: CTGGCTGGCCTGCCCTTGGCACCTGGCGTAGAGCAC...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGCCGGTTCCCTGGTGCTaGACAGCCACGCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEPVPWC*TATHSP
Trigger: TGGGGAGTGCGTGGCTGTGCAGCACCAGGGAACCGG...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCTGGTCTACTGGGAGTaGTGCAACCGTGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASLVYWE*CNRVQP
Trigger: GGGCTGAACACGGTTGCAGCACTCCCAGTAGACCAG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621401.4
CDS-3UTR CCA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTGGTGGACGCGTGCTTaGAGTAGCCATCATACACAG +
Preference number: 4 (lower is better)
Translates to: KGPPPTALIPYRSWQLLAWWTRA*SSHHTQ
Trigger: CTGTGTATGATGGCTACTCCAAGCACGCGTCCACCA...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCCCAGAAGGTGGGCTTaGCCACAGCTCCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCPRRWA*PQLPSA
Trigger: AGCAGATGGGAGCTGTGGCCAAGCCCACCTTCTGGG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGGGGTCCTGCTGTGGTTaGGGACCAGGACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEGSCCG*GPGLGG
Trigger: TCCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCC...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGGGGTCCTGCTGTGGTTaGGGACCAGGACTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGGSCCG*GPGLGG
Trigger: TCCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCC...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGACGGCCACGAGAGGGTaGCATGCTCCGCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGETATRG*HAPPSH
Trigger: GTGGGAAGGCGGAGCATGCCACCCTCTCGTGGCCGT...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGGGGTGCATCCCCAGGTaGAAGGTGATGGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWGCIPR*KVMEGP
Trigger: GGGTCCCTCCATCACCTTCCACCTGGGGATGCACCC...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCCTGGGGTGGGGTCCCTaGGAGTCCACACACCCAGCT +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPLGWGP*ESTHPA
Trigger: AGCTGGGTGTGTGGACTCCCAGGGACCCCACCCCAG...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGGTGCAGCGTGACCGCTaGCACCAAAAGGTCTCACGC +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLVQRDR*HQKVSR
Trigger: GCGTGAGACCTTTTGGTGCCAGCGGTCACGCTGCAC...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGGCTGGCACTTGCAGGTaGGGGCCCTTGGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEAGTCR*GPLGAL
Trigger: CAGAGCTCCCAAGGGCCCCCACCTGCAAGTGCCAGC...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTAGGCAGAACCATGTGTaGGGCTGGGACAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPRQNHV*GWDRSG
Trigger: CCCTGACCTGTCCCAGCCCCACACATGGTTCTGCCT...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCCCCCGAAGTGGGAACTaGGCCCCCATGGTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPPRSGN*APMVPS
Trigger: ACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGG...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
62% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGAATGAAGCTCAGGGCTaGGCGGAAGCTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLNEAQG*AEAGRA
Trigger: AGCCCTGCCAGCTTCCGCCCAGCCCTGAGCTTCATT...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCCAGCAGGGGCTCCCCTaGCCAGGGCCATACTTTGGG +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVQQGLP*PGPYFG
Trigger: CCCAAAGTATGGCCCTGGTCAGGGGAGCCCCTGCTG...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTCAGCAGGGGCTCCCCTaGCCAGGGCCATACTTTGGG +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGQQGLP*PGPYFG
Trigger: CCCAAAGTATGGCCCTGGTCAGGGGAGCCCCTGCTG...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCTCCCAGCCCTGGCTaGGGAAGCCACCCAACCCGA +
Preference number: 4 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDPPSPG*GSHPTR
Trigger: TCGGGTTGGGTGGCTTCCTCAGCCAGGGCTGGGAGG...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCTGGTGCAGGGGGTGGTaGGTGAGCGAGGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGWCRGW*VSEEAL
Trigger: TAGTGCCTCCTCGCTCACTCACCACCCCCTGCACCA...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTCTGCGAGCTGAGGTTTaGAGAGGAGAGCAGACCACC +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPLRAEV*RGEQTT
Trigger: GGTGGTCTGCTCTCCTCTTCAAACCTCAGCTCGCAG...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCCAGGGGCGTCATGGCTaGAGGCAGGAGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLQGRHG*RQEGSV
Trigger: CACGCTGCCCTCCTGCCTGCAGCCATGACGCCCCTG...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTTGGGGGTGTAGTAGGTaGGCGTGGTCATGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPWGCSR*AWSCSR
Trigger: CCTACTGCATGACCACGCGCACCTACTACACCCCCA...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAACTCCCATCTGCTCAGTaGTCCCTGCCTGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: FPPKVPLQKTGTVLLQRELPSAQ*SLPDWA
Trigger: GGCCCAGTCAGGCAGGGAGCACTGAGCAGATGGGAG...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGAGGACACACACCCCTTaGTGGACCCGAAAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRRTHTP*WTRKSF
Trigger: GAAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGTCCT...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTCAGCTTCAGGCCTGGTaGCCTCCCCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGQLQAW*PPREGV
Trigger: CACCCCCTCACGGGGAGGGCACCAGGCCTGAAGCTG...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCCAGCTTCAGGCCTGGTaGCCTCCCCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPQLQAW*PPREGV
Trigger: CACCCCCTCACGGGGAGGGCACCAGGCCTGAAGCTG...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAACATGGCCCTAGCTCCTaGCAGCTTCAGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FPPKVPLQKTGTVLLQREHGPSS*QLQAWC
Trigger: GCACCAGGCCTGAAGCTGGCAGGAGCTAGGGCCATG...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCCATGGCCCTAGCTCCTaGCAGCTTCAGGCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGHGPSS*QLQAWC
Trigger: GCACCAGGCCTGAAGCTGGCAGGAGCTAGGGCCATG...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGACTCGGGGGACCACCTaGTCTGCCCCTTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARTRGTT*SAPFPP
Trigger: GGGAGGGAAAGGGGCAGAGCAGGTGGTCCCCCGAGT...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCCTGCGTCTTTTGCCTTaGTCGGCTGGGTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCLRLLP*SAGSCC
Trigger: ACAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAG...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGCCAACCCCCAGCCTGTaGGCGCATCCCCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRPTPSL*AHPPVL
Trigger: CAGGACTGGGGGATGCGCGCACAGGCTGGGGGTTGG...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTCACGAGAGGGTGGCATaGTCCGCCTTCCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGHERVA*SAFPRP
Trigger: TGGGCGTGGGAAGGCGGAGCATGCCACCCTCTCGTG...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTGGGACCCACTCACTGTaGGCATCCCGCTGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLGTHSL*ASRCGG
Trigger: TCCCCCGCAGCGGGATGCGCACAGTGAGTGGGTCCC...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGTGTTGGGCTGACCCCTaGTTCCCAGGCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARCWADP*FPGLGW
Trigger: CCACCCCAGGCCTGGGAAGCAGGGGTCAGCCCAACA...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGGGGCCTCAGGTaGAGCGTGACCGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCGGGLR*SVTAGT
Trigger: GGTGCCAGCGGTCACGCTGCACCTGAGGCCCCCACC...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTATCCCCCAGGGGTCCTaGATCAAAGCTCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASIPQGS*IKALEM
Trigger: CATCTCCAGAGCTTTGATGCAGGACCCCTGGGGGAT...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGGCCTCATTTGGGCACTaGCCTGAGGCTGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWASFGH*PEAGTC
Trigger: GCAAGTGCCAGCCTCAGGGCAGTGCCCAAATGAGGC...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGAAGCCGCGCAGTGACTaGTCCCAGCCTCTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEKPRSD*SQPLPR
Trigger: CCTTGGGAGAGGCTGGGAGCAGTCACTGCGCGGCTT...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGTACTGCTGTGATTTCTaGCGGCGCTGCTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLYCCDF*RRCCAG
Trigger: ACCGGCACAGCAGCGCCGGCAGAAATCACAGCAGTA...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTCCCGGACAAGTTTACTaGTGTGATTTCTGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASPGQVY*CDFCRR
Trigger: GCGCCGGCAGAAATCACAGCAGTAAACTTGTCCGGG...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGGGTGGGAGAAGCGGCTaGACTGTGGTGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARGGRSG*TVVQGV
Trigger: CACCCCCTGCACCACAGTGCAGCCGCTTCTCCCACC...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGACTGGGCCCCCATGGTaGCCAGTGCCTCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRTGPPW*PVPLPL
Trigger: GAGGGGGAGAGGCACTGGGCACCATGGGGGCCCAGT...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACACTGGGCCCCCATGGTaGCCAGTGCCTCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDTGPPW*PVPLPL
Trigger: GAGGGGGAGAGGCACTGGGCACCATGGGGGCCCAGT...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGGGCCAGAGTCAGGCCTaGGGCTTCGAGCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGGQSQA*GFELPN
Trigger: GTTGGGAAGCTCGAAGCCGCAGGCCTGACTCTGGCC...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS-3UTR CCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGGGATCCAACTCAGGGTaGTGCGCAGAGGACGTGGGG +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGGSNSG*CAEDVG
Trigger: CCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCC...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGGGATCCAACTCAGGGTaGTGCGCAGAGGACGTGGGG +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEGSNSG*CAEDVG
Trigger: CCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCC...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGGGCAGCAGGAGGTGGTaGACGCGTGCTTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEGSRRW*TRAWSS
Trigger: GCTACTCCAAGCACGCGTCCACCACCTCCTGCTGCC...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGTTGCAGAGGTCGTACTaGCAGCAGGAGGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLLQRSY*QQEVVD
Trigger: GTCCACCACCTCCTGCTGCCAGTACGACCTCTGCAA...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCAGGTCGCAGGGAGTGTaGAGGGTGAGGCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPRSQGV*RVRQGE
Trigger: CTCACCCTGCCTCACCCTCCACACTCCCTGCGACCT...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCACCAGGGCCATACTTTaGGGCCGGGACAATCCTACC +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCTRAIL*GRDNPT
Trigger: GGTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGT...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTCCCTTTGCAGAAGACTaGCACTGTCCTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPPFAED*HCPPPA
Trigger: CGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGG...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCAGGCCCACCCTGTGCTaGCAGCAACTCCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGRPTLC*QQLLPS
Trigger: GCTGGGAAGGAGTTGCTGCCAGCACAGGGTGGGCCT...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGGGCCCTTGGGAGCTCTaGGAGGCACCTGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWGPWEL*EAPGSL
Trigger: GAGGCTGCCAGGTGCCTCCCAGAGCTCCCAAGGGCC...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCACCCAACCCGACAATaGGCTTGCGCAAGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHHPTRQ*ACASRA
Trigger: TGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGGAGAGATCCCCGAAGTaGGAACTGGGCCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWERSPK*ELGPHG
Trigger: ACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTC...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGCTGGGCGGAAGCTaGCAGGGCTGTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLGLGGS*QGCPQG
Trigger: TCCCTGTGGACAGCCCTGCCAGCTTCCGCCCAGCCC...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATGCAGGGGCATGGCCCTaGGAAGCACCTGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDAGAWP*EAPGPQ
Trigger: CTGGGGTCCAGGTGCTTCCCAGGGCCATGCCCCTGC...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCCCACCAGGATCAGGGTaGGCAGGGGCGTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPPPGSG*AGASWL
Trigger: CAGCCATGACGCCCCTGCTCACCCTGATCCTGGTGG...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCGACCCTGGGCATGGCTaGGGAGGTCGCAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTDPGHG*GGRREC
Trigger: ACACTCCCTGCGACCTCCTCAGCCATGCCCAGGGTC...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTGGTGCGTGTTGGGCTaGCCCCTGCTTCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRWCVLG*PLLPRP
Trigger: AGGCCTGGGAAGCAGGGGTCAGCCCAACACGCACCA...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCGCTCTGGGCCCAGTATaGTGCCCATCTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPALGPV*CPSSLW
Trigger: CCAGAGGGAAGATGGGCATCATACTGGGCCCAGAGC...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGATCGCTGGCTGCAGCTaGGAGGGCCTCATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEIAGCS*EGLIWA
Trigger: TGCCCAAATGAGGCCCTCTCAGCTGCAGCCAGCGAT...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGCCTCCCAGCCCTGGCTaGGGAAGCCACCCAACCCGA +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKPPSPG*GSHPTR
Trigger: TCGGGTTGGGTGGCTTCCTCAGCCAGGGCTGGGAGG...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTCCTCCCAGCCCTGGCTaGGGAAGCCACCCAACCCGA +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCPPSPG*GSHPTR
Trigger: TCGGGTTGGGTGGCTTCCTCAGCCAGGGCTGGGAGG...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCCATCACCCCACTaGGACTCGAGACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHSPSPH*DSRQGG
Trigger: TCCTCCCTGTCTCGAGTCTCAGTGGGGTGATGGGGA...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGCCAAGCAGCCACTCCTaGGTCACTCGGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEPSSHS*VTRACP
Trigger: TGGACATGCCCGAGTGACTCAGGAGTGGCTGCTTGG...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGATGCCCACGACCAGCTaGGCCAGACCAGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGMPTTS*ARPAFP
Trigger: TGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCAT...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGCCGCTCGCCGGTAGGTaGCTGCCTGAGTCTAATCGT +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEPLAGR*LPESNR
Trigger: ACGATTAGACTCAGGCAGGCACCTACCGGCGAGCGG...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR GCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGCAGGGGCGTCATGGCTaGAGGCAGGAGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKQGRHG*RQEGSV
Trigger: CACGCTGCCCTCCTGCCTGCAGCCATGACGCCCCTG...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCCACGAGAGGGTGGCATaGTCCGCCTTCCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPHERVA*SAFPRP
Trigger: TGGGCGTGGGAAGGCGGAGCATGCCACCCTCTCGTG...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGCACGAGAGGGTGGCATaGTCCGCCTTCCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWHERVA*SAFPRP
Trigger: TGGGCGTGGGAAGGCGGAGCATGCCACCCTCTCGTG...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGGGACCCACTCACTGTaGGCATCCCGCTGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLGTHSL*ASRCGG
Trigger: TCCCCCGCAGCGGGATGCGCACAGTGAGTGGGTCCC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCCTCCCAGTGGGTaGATCCCCAGGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVCPPSG*IPRWKV
Trigger: CACCTTCCACCTGGGGATGCACCCACTGGGAGGGCA...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCCTGGGGCTTCCACCCTaGCCTCCCAGTGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLLGLPP*PPSGCI
Trigger: GATGCACCCACTGGGAGGGCAGGGTGGAAGCCCCAG...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTATCCCCCAGGGGTCCTaGATCAAAGCTCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPIPQGS*IKALEM
Trigger: CATCTCCAGAGCTTTGATGCAGGACCCCTGGGGGAT...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCACCCCGGGCCGGTCCTaGTCTCCAGGCTTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTTPGRS*SPGLGL
Trigger: TAGCCCTAAGCCTGGAGAGCAGGACCGGCCCGGGGT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCGCCTCATTTGGGCACTaGCCTGAGGCTGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPASFGH*PEAGTC
Trigger: GCAAGTGCCAGCCTCAGGGCAGTGCCCAAATGAGGC...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCGCAGGTGTGAGAAGCTaGCCACCCCACCCCTCAACA +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGAGVRS*PPHPST
Trigger: TGTTGAGGGGTGGGGTGGGCAGCTTCTCACACCTGC...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAAGCAGGTGTGAGAAGCTaGCCACCCCACCCCTCAACA +
Preference number: 4 (lower is better)
Translates to: FPPKVPLQKTGTVLLQREAGVRS*PPHPST
Trigger: TGTTGAGGGGTGGGGTGGGCAGCTTCTCACACCTGC...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACGTGCCGGTTCCCTGGTaGTGCACAGCCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDVPVPW*CTATHS
Trigger: GGAGTGCGTGGCTGTGCAGCACCAGGGAACCGGCAC...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTTCTGCCACTCTGCCCTaGACCCAGAGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGSATLP*TQRQRW
Trigger: CCAGCGCTGCCTCTGGGTGCAGGGCAGAGTGGCAGA...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCAGGGCAGCGTGGGAGTaGGGAGGTCAACAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPRAAWE*GGQQQL
Trigger: TAGCTGCTGTTGACCTCCCCACTCCCACGCTGCCCT...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGTGGCAGTCCAAGGCCTaGGCCAGAGGTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEWQSKA*ARGKPM
Trigger: CATGGGCTTACCTCTGGCCCAGGCCTTGGACTGCCA...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGGGCAGCAGGAGGTGGTaGACGCGTGCTTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARGSRRW*TRAWSS
Trigger: GCTACTCCAAGCACGCGTCCACCACCTCCTGCTGCC...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGACTGGCAGCAGGAGGTaGTGGACGCGTGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGETGSRR*WTRAWS
Trigger: ACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGT...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATACTGGCAGCAGGAGGTaGTGGACGCGTGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHTGSRR*WTRAWS
Trigger: ACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGT...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGAGAGATCCCCGAAGTGGGAACTGGGCCCCCATGGTGCCCAGTGCCTCTAGCTTTGTTCTTGAGTaGGTCTGCCTCGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: CERDPRSGNWAPMVPSASSFVLE*VCLGGF
Trigger: AAAGCCCCCGAGGCAGACCCACTCAAGAACAAAGCT...AGAGGCACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTCTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTAGGTCGCAGGGAGTGTaGAGGGTGAGGCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGRSQGV*RVRQGE
Trigger: CTCACCCTGCCTCACCCTCCACACTCCCTGCGACCT...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCAGGTCGTGTGGTGGTTaGGGGAGGTCGGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGRSCGG*GRSGVF
Trigger: GAAGACACCCGACCTCCCCCAACCACCACACGACCT...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCCGAAGTGAGGTCGTGTaGTGGTTGGGGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVRSEVV*WLGEVG
Trigger: CCCGACCTCCCCCAACCACCACACGACCTCACTTCG...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCCCCAGAAGGTGGGCTTaGCCACAGCTCCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPPRRWA*PQLPSA
Trigger: AGCAGATGGGAGCTGTGGCCAAGCCCACCTTCTGGG...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCATCCCGTACCGGTCCTaGCAGCTCCTGGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPIPYRS*QLLASV
Trigger: TACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGAT...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCTTTGCCTTGCTCGGCTaGGTCCTGCTGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPFALLG*VLLWLG
Trigger: CCCCAACCACAGCAGGACCCAGCCGAGCAAGGCAAA...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCACGGCCACGAGAGGGTaGCATGCTCCGCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPTATRG*HAPPSH
Trigger: GTGGGAAGGCGGAGCATGCCACCCTCTCGTGGCCGT...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGGGGTGCATCCCCAGGTaGAAGGTGATGGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARGCIPR*KVMEGP
Trigger: GGGTCCCTCCATCACCTTCCACCTGGGGATGCACCC...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTACCCTGCCCTCCCAGTaGGTGCATCCCCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGTLPSQ*VHPQVE
Trigger: TTCCACCTGGGGATGCACCCACTGGGAGGGCAGGGT...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTCAGAGCTGGGAGCACTaGTCAGGTGGGGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGQSWEH*SGGGLR
Trigger: CCTGAGGCCCCCACCTGACCAGTGCTCCCAGCTCTG...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCCAGAGCTGGGAGCACTaGTCAGGTGGGGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTQSWEH*SGGGLR
Trigger: CCTGAGGCCCCCACCTGACCAGTGCTCCCAGCTCTG...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGCTGCAAGGAGACCCCTaGGGTGGAGACCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGELQGDP*GGDPHS
Trigger: GGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAG...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGCCCTTGGGAGCTCTaGGAGGCACCTGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCGPWEL*EAPGSL
Trigger: GAGGCTGCCAGGTGCCTCCCAGAGCTCCCAAGGGCC...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCGCTGGCACTTGCAGGTaGGGGCCCTTGGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTAGTCR*GPLGAL
Trigger: CAGAGCTCCCAAGGGCCCCCACCTGCAAGTGCCAGC...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCAGTCCCTCCCAGCCCTaGCTGAGGAAGCCACCCAAC +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVSPSQP*LRKPPN
Trigger: GTTGGGTGGCTTCCTCAGCCAGGGCTGGGAGGGACT...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGAGGCAGAACCATGTGTaGGGCTGGGACAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGERQNHV*GWDRSG
Trigger: CCCTGACCTGTCCCAGCCCCACACATGGTTCTGCCT...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGGCTGTGCCGGTTCCCTaGTGCTGCACAGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWAVPVP*CCTATH
Trigger: GTGCGTGGCTGTGCAGCACCAGGGAACCGGCACAGC...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACAGGGCCACAGTGCAGTaGGGGGACCCACGTCCATCG +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDRATVQ*GDPRPS
Trigger: CGATGGACGTGGGTCCCCCCACTGCACTGTGGCCCT...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGGGGCTGGGCGGAAGCTaGCAGGGCTGTCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKGLGGS*QGCPQG
Trigger: TCCCTGTGGACAGCCCTGCCAGCTTCCGCCCAGCCC...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
3UTR CAA 72 bp GAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTaGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: ERSRPRSEVVWW*GEVGCLLAHSP
Trigger: AGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATGGCAGCGCATGGGGTTaGAGCAGTTGTCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHGSAWG*SSCLRC
Trigger: ACAACGGAGACAACTGCTTCAACCCCATGCGCTGCC...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCGCACGCAGGACTTACTaGCCTTCATCCTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVARRTY*PSSWWG
Trigger: CCCCCACCAGGATGAAGGTCAGTAAGTCCTGCGTGC...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGAGGGTGAGGCAGGGTaGGCTGGGTGCGAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCEGEAG*AGCEGV
Trigger: TACACCCTCGCACCCAGCTCACCCTGCCTCACCCTC...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGAGGGTGAGGCAGGGTaGGCTGGGTGCGAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLEGEAG*AGCEGV
Trigger: TACACCCTCGCACCCAGCTCACCCTGCCTCACCCTC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGACCCTGGGCATGGCTaGGGAGGTCGCAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCDPGHG*GGRREC
Trigger: ACACTCCCTGCGACCTCCTCAGCCATGCCCAGGGTC...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTTCTTGCCCACAGTCCTaGCCCTGGGCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGSCPQS*PWAWLR
Trigger: CCTCAGCCATGCCCAGGGTCAGGACTGTGGGCAAGA...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCTTGCCCACAGTCCTaGCCCTGGGCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRSCPQS*PWAWLR
Trigger: CCTCAGCCATGCCCAGGGTCAGGACTGTGGGCAAGA...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTAAACGTCAAGGGGTTTaGCTGAGAGGACACACACCC +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPKRQGV*LRGHTP
Trigger: GGGTGTGTGTCCTCTCAGTCAAACCCCTTGACGTTT...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTTGGTGCGTGTTGGGCTaGCCCCTGCTTCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCWCVLG*PLLPRP
Trigger: AGGCCTGGGAAGCAGGGGTCAGCCCAACACGCACCA...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATGCCTCAGGTGCAGCGTaGCCGCTGGCACCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDASGAA*PLAPKG
Trigger: ACCTTTTGGTGCCAGCGGTCACGCTGCACCTGAGGC...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTGAGACCCTCATTCCCTaGTCCCCCAGGGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLETLIP*SPRGPA
Trigger: TGCAGGACCCCTGGGGGATCAGGGAATGAGGGTCTC...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGATCGCTGGCTGCAGCTaGGAGGGCCTCATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARIAGCS*EGLIWA
Trigger: TGCCCAAATGAGGCCCTCTCAGCTGCAGCCAGCGAT...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGCCACGCACTCCCCATaGGTGGGCCTGCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLATHSP*VGLPSI
Trigger: AATGCTGGGCAGGCCCACTCATGGGGAGTGCGTGGC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCTGGTGCAGGGGGTGGTaGGTGAGCGAGGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLWCRGW*VSEEAL
Trigger: TAGTGCCTCCTCGCTCACTCACCACCCCCTGCACCA...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGTGGGGGTGTAGTAGGTaGGCGTGGTCATGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGWGCSR*AWSCSR
Trigger: CCTACTGCATGACCACGCGCACCTACTACACCCCCA...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGTGGCAAGGCCGGTaGCGTTGCAGAGGTCGTACT +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLGWQGR*RCRGRT
Trigger: AGTACGACCTCTGCAACGGCACCGGCCTTGCCACCC...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGGTGGCAAGGCCGGTaGCGTTGCAGAGGTCGTACT +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGGWQGR*RCRGRT
Trigger: AGTACGACCTCTGCAACGGCACCGGCCTTGCCACCC...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGCTCCCATCTGCTCAGTaGTCCCTGCCTGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRLPSAQ*SLPDWA
Trigger: GGCCCAGTCAGGCAGGGAGCACTGAGCAGATGGGAG...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTAGGACACACACCCCTTaGTGGACCCGAAAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPRTHTP*WTRKSF
Trigger: GAAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGTCCT...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGACTCGGGGGACCACCTaGTCTGCCCCTTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSTRGTT*SAPFPP
Trigger: GGGAGGGAAAGGGGCAGAGCAGGTGGTCCCCCGAGT...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGCAGTCCTGCGTCTTTTaGCTTGCTCGGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEQSCVF*LARLGP
Trigger: AGGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTG...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGCTGGGGCTTCCACCCTaGCCTCCCAGTGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKLGLPP*PPSGCI
Trigger: GATGCACCCACTGGGAGGGCAGGGTGGAAGCCCCAG...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTTGGGCTGACCCCTaGTTCCCAGGCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSCWADP*FPGLGW
Trigger: CCACCCCAGGCCTGGGAAGCAGGGGTCAGCCCAACA...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCAGCGGGAACTGGGTGTaGCCTCAGCAAGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVSGNWV*PQQDSA
Trigger: GGCAGAGTCTTGCTGAGGGCACACCCAGTTCCCGCT...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCAAGCCGCGCAGTGACTaGTCCCAGCCTCTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTKPRSD*SQPLPR
Trigger: CCTTGGGAGAGGCTGGGAGCAGTCACTGCGCGGCTT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGATTTCTGCCGGCGCTaGTGTGCCGGTTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLDFCRR*CAGSLV
Trigger: CACCAGGGAACCGGCACAGCAGCGCCGGCAGAAATC...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTCTGCCACTCTGCCCTaGACCCAGAGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKSATLP*TQRQRW
Trigger: CCAGCGCTGCCTCTGGGTGCAGGGCAGAGTGGCAGA...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCTCTCCCCCTCTCCTCTaGCACTCTGCCCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTSPPLL*HSALHP
Trigger: TGGGTGCAGGGCAGAGTGGCAGAGGAGAGGGGGAGA...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCACAGACCAGAGCTCCTaGTGGAGCCGGGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTTDQSS*WSRVSP
Trigger: TGGGGACACCCGGCTCCAGCAGGAGCTCTGGTCTGT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATACAGACCAGAGCTCCTaGTGGAGCCGGGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDTDQSS*WSRVSP
Trigger: TGGGGACACCCGGCTCCAGCAGGAGCTCTGGTCTGT...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGACAGACCAGAGCTCCTaGTGGAGCCGGGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWTDQSS*WSRVSP
Trigger: TGGGGACACCCGGCTCCAGCAGGAGCTCTGGTCTGT...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATGGATCCAACTCAGGGTaGTGCGCAGAGGACGTGGGG +
Preference number: 4 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDGSNSG*CAEDVG
Trigger: CCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCC...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGGCAACAGCTAGCCCTGGGCATCTACCCCCATGAAGGGGACCCTCGGTTCTGCTGTAGTAGGTGCGCGTaGTCATGCAGTAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: WQQLALGIYPHEGDPRFCCSRCA*SCSRQP
Trigger: TGGTTGCCTACTGCATGACCACGCGCACCTACTACA...GCAGAACCGAGGGTCCCCTTCATGGGGGTAGATGCCCAGGGCTAGCTGTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTTGTAGTAGGTGCGCGTaGTCATGCAGTAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPCSRCA*SCSRQP
Trigger: TGGTTGCCTACTGCATGACCACGCGCACCTACTACA...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGGGCAGCAGGAGGTGGTaGACGCGTGCTTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRGSRRW*TRAWSS
Trigger: GCTACTCCAAGCACGCGTCCACCACCTCCTGCTGCC...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGAGCTTTGTTCTTGAGTaGGTCTGCCTCGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLSFVLE*VCLGGF
Trigger: AAAGCCCCCGAGGCAGACCCACTCAAGAACAAAGCT...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCAGGTCGCAGGGAGTGTaGAGGGTGAGGCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLRSQGV*RVRQGE
Trigger: CTCACCCTGCCTCACCCTCCACACTCCCTGCGACCT...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCGAAGTGAGGTCGTGTaGTGGTTGGGGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLRSEVV*WLGEVG
Trigger: CCCGACCTCCCCCAACCACCACACGACCTCACTTCG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTGGGCTTCCCAGAAGGTaGGCTTGGCCACAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLGLPRR*AWPQLP
Trigger: TGGGAGCTGTGGCCAAGCCCACCTTCTGGGAAGCCC...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTATCCCGTACCGGTCCTaGCAGCTCCTGGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGIPYRS*QLLASV
Trigger: TACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGAT...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCATCCCGTACCGGTCCTaGCAGCTCCTGGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVIPYRS*QLLASV
Trigger: TACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGAT...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAATGGATTGGTGCGTGTTaGGCTGACCCCTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FPPKVPLQKTGTVLLQREWIGAC*ADPCFP
Trigger: TGGGAAGCAGGGGTCAGCCCAACACGCACCAATCCA...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGGGAGCACTGGTCAGGTaGGGGCCTCAGGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKGALVR*GPQVQR
Trigger: ACGCTGCACCTGAGGCCCCCACCTGACCAGTGCTCC...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTCAGAGCTGGGAGCACTaGTCAGGTGGGGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCQSWEH*SGGGLR
Trigger: CCTGAGGCCCCCACCTGACCAGTGCTCCCAGCTCTG...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCCTGCCCATGCGGGATaGCTTGAAGGGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHPAHAG*LEGFLR
Trigger: CCTGAGAAACCCTTCAAGCCATCCCGCATGGGCAGG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGCCTGCCCATGCGGGATaGCTTGAAGGGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGPAHAG*LEGFLR
Trigger: CCTGAGAAACCCTTCAAGCCATCCCGCATGGGCAGG...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGTCCTCCAGCGGGAACTaGGTGTGCCCTCAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARSSSGN*VCPQQD
Trigger: GTCTTGCTGAGGGCACACCCAGTTCCCGCTGGAGGA...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGACTCCTTCCCAGCTCTaGGCCCAGTATGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWTPSQL*AQYDAH
Trigger: ATGGGCATCATACTGGGCCCAGAGCTGGGAAGGAGT...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCAGGCCCACCCTGTGCTaGCAGCAACTCCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTRPTLC*QQLLPS
Trigger: GCTGGGAAGGAGTTGCTGCCAGCACAGGGTGGGCCT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGATCCCAAGGCATCGCTaGCTGCAGCTGAGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARIPRHR*LQLRGP
Trigger: AGGCCCTCTCAGCTGCAGCCAGCGATGCCTTGGGAT...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGCGCACTCCCCATGAGTaGGCCTGCCCAGCATTAGCT +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARRTPHE*ACPALA
Trigger: AGCTAATGCTGGGCAGGCCCACTCATGGGGAGTGCG...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTCGCACTCCCCATGAGTaGGCCTGCCCAGCATTAGCT +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGRTPHE*ACPALA
Trigger: AGCTAATGCTGGGCAGGCCCACTCATGGGGAGTGCG...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGGCTGTGCCGGTTCCCTaGTGCTGCACAGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSAVPVP*CCTATH
Trigger: GTGCGTGGCTGTGCAGCACCAGGGAACCGGCACAGC...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGAGGGCCACAGTGCAGTaGGGGGACCCACGTCCATCG +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSRATVQ*GDPRPS
Trigger: CGATGGACGTGGGTCCCCCCACTGCACTGTGGCCCT...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGGAGGAGGCACTAGTGTaGGGCAGCTACTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGEEALV*GSYFTS
Trigger: GGAGGTGAAGTAGCTGCCCCACACTAGTGCCTCCTC...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGCCAAGGAACCCCAGCTaGTGGGAGAAGCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRPRNPS*WEKRLH
Trigger: GTGCAGCCGCTTCTCCCACCAGCTGGGGTTCCTTGG...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGCCCCGAAGTGGGAACTaGGCCCCCATGGTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLPRSGN*APMVPS
Trigger: ACTGGGCACCATGGGGGCCCAGTTCCCACTTCGGGG...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCCACCGGCAGAAAAGCTaGCATATCCACCGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGHRQKS*HIHRGP
Trigger: AGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTG...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTGAGATCCTGAGGGGCTaGCAGATTCAGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGEILRG*QIQALP
Trigger: AGGGAGGGCCTGAATCTGCCAGCCCCTCAGGATCTC...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCGAGCTCCTGGTCTACTaGGAGTGCTGCAACCGCCTT +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGELLVY*ECCNRL
Trigger: AAGGCGGTTGCAGCACTCCCAGTAGACCAGGAGCTC...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS-3UTR CCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGGAGCTCCTGGTCTACTaGGAGTGCTGCAACCGTGTT +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWELLVY*ECCNRV
Trigger: AACACGGTTGCAGCACTCCCAGTAGACCAGGAGCTC...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621401.4
CDS-3UTR TCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCCGAGAGCTTTGTTCTTaGGTGGGTCTGCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPRELCS*VGLPRG
Trigger: CCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCG...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTCGAGAGCTTTGTTCTTaGGTGGGTCTGCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGRELCS*VGLPRG
Trigger: CCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCG...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTCTTGCCCACAGTCCTaGCCCTGGGCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKSCPQS*PWAWLR
Trigger: CCTCAGCCATGCCCAGGGTCAGGACTGTGGGCAAGA...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGTCAAGGCCTCGAAGTaGGGTCGTGTGGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGVKASK*GRVVVG
Trigger: CCCAACCACCACACGACCTCACTTCGAGGCCTTGAC...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGGTCAAGGCCTCGAAGTaGGGTCGTGTGGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRVKASK*GRVVVG
Trigger: CCCAACCACCACACGACCTCACTTCGAGGCCTTGAC...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCGTCAAGGCCTCGAAGTaGGGTCGTGTGGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPVKASK*GRVVVG
Trigger: CCCAACCACCACACGACCTCACTTCGAGGCCTTGAC...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGGTCAAGGGGTTTGACTaGGAGGACACACACCCCTTG +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEVKGFD*EDTHPL
Trigger: CAAGGGGTGTGTGTCCTCTCAGTCAAACCCCTTGAC...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCCCATGCGGGATGGCTTaGAGGGTTTCTCAGGACACC +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVPCGMA*RVSQDT
Trigger: GGTGTCCTGAGAAACCCTTCAAGCCATCCCGCATGG...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGGAGACAGGGAGGACCTaGTCCTGGAGTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSETGRT*SWSPSQ
Trigger: CTGGGAGGGACTCCAGGATCAGGTCCTCCCTGTCTC...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACTCCCCATCACCCCACTaGGACTCGAGACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDSPSPH*DSRQGG
Trigger: TCCTCCCTGTCTCGAGTCTCAGTGGGGTGATGGGGA...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAACGTCCATCGCCACCTTaGTGCATACAACCCGGACAA +
Preference number: 4 (lower is better)
Translates to: FPPKVPLQKTGTVLLQRERPSPP*CIQPGQ
Trigger: TTGTCCGGGTTGTATGCATCAAGGTGGCGATGGACG...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGACCAAATCGCCTTCATaGGAGATGACGAATCAGATG +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRTKSPS*EMTNQM
Trigger: CATCTGATTCGTCATCTCTCATGAAGGCGATTTGGT...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGCCCTCCCTGCGAGCTaGGGTTTGAAGAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGALPAS*GLKRRA
Trigger: TGCTCTCCTCTTCAAACCTCAGCTCGCAGGGAGGGC...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTATGCCCACGACCAGCTaGGCCAGACCAGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLMPTTS*ARPAFP
Trigger: TGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCAT...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGTGTAGTAGGTaGGCGTGGTCATGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGWGCSR*AWSCSR
Trigger: CCTACTGCATGACCACGCGCACCTACTACACCCCCA...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTCAAGGCCGGTGCCGTTaGAGAGGTCGTACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCQGRCR*RGRTGS
Trigger: GCTGCCAGTACGACCTCTGCAACGGCACCGGCCTTG...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGGGTGGCAAGGCCGGTaGCGTTGCAGAGGTCGTACT +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLGWQGR*RCRGRT
Trigger: AGTACGACCTCTGCAACGGCACCGGCCTTGCCACCC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCCAGCTTCAGGCCTGGTaGCCTCCCCGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFQLQAW*PPREGV
Trigger: CACCCCCTCACGGGGAGGGCACCAGGCCTGAAGCTG...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATGCTCCCTGGGCTACCTaGATCGGGGATGGATTGGTG +
Preference number: 4 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDAPWAT*IGDGLV
Trigger: CACCAATCCATCCCCGATGCAGGTAGCCCAGGGAGC...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTCTCACGCCCCCGAATaGCCCATTCACAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSSHAPE*PIHSRG
Trigger: GCCCCTGCTGTGAATGGGGCATTCGGGGGCGTGAGA...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATGCCTCATTTGGGCACTaGCCTGAGGCTGGCACTTGC +
Preference number: 4 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDASFGH*PEAGTC
Trigger: GCAAGTGCCAGCCTCAGGGCAGTGCCCAAATGAGGC...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTAAGCCGCGCAGTGACTaGTCCCAGCCTCTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCKPRSD*SQPLPR
Trigger: CCTTGGGAGAGGCTGGGAGCAGTCACTGCGCGGCTT...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGGCAGGTGTGAGAAGCTaGCCACCCCACCCCTCAACA +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRAGVRS*PPHPST
Trigger: TGTTGAGGGGTGGGGTGGGCAGCTTCTCACACCTGC...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGTACTGCTGTGATTTCTaGCGGCGCTGCTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARYCCDF*RRCCAG
Trigger: ACCGGCACAGCAGCGCCGGCAGAAATCACAGCAGTA...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTACTGCTGTGATTTCTaGCGGCGCTGCTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVYCCDF*RRCCAG
Trigger: ACCGGCACAGCAGCGCCGGCAGAAATCACAGCAGTA...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCGGGGACCCTCGGTTCTaGGAGAGAGATCCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPGDPRF*ERDPRS
Trigger: ACTTCGGGGATCTCTCTCGCAGAACCGAGGGTCCCC...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCGGGGACCCTCGGTTCTaGGAGAGAGATCCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTGDPRF*ERDPRS
Trigger: ACTTCGGGGATCTCTCTCGCAGAACCGAGGGTCCCC...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAAGATTCAGGCCCTCCCTaGGAGCTGAGGTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: FPPKVPLQKTGTVLLQREDSGPP*ELRFEE
Trigger: CTCTTCAAACCTCAGCTCGCAGGGAGGGCCTGAATC...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGTTCAGCGGGCACTTATaGCCACGACCAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARFSGHL*PRPAEP
Trigger: TGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAA...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGGACAGGAGGGAGAGATaGCATCCATTCAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARDRRER*HPFSGH
Trigger: GTGCCCGCTGAATGGATGGCATCTCTCCCTCCTGTC...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGCTCTCACGACACATTTaGCCAGGCCAACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGLSRHI*PGQPQD
Trigger: ATCCTGGGGTTGGCCTGGGCAAATGTGTCGTGAGAG...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS-3UTR CCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTGAGCTCCTGGTCTACTaGGAGTGCTGCAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGELLVY*ECCNPV
Trigger: CACAGGGTTGCAGCACTCCCAGTAGACCAGGAGCTC...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR CCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCGATCCAACTCAGGGGTaGCGCACAGAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGDPTQG*RTEDPT
Trigger: AGTTGGATCCTCTGTGCGCCACCCCTGAGTTGGATC...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATGATCCAACTCAGGGGTaGCGCACAGAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHDPTQG*RTEDPT
Trigger: AGTTGGATCCTCTGTGCGCCACCCCTGAGTTGGATC...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTAGGGCAGCGTGGGAGTaGGGAGGTCAACAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGRAAWE*GGQQQL
Trigger: TAGCTGCTGTTGACCTCCCCACTCCCACGCTGCCCT...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCAGGGCAGCGTGGGAGTaGGGAGGTCAACAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTRAAWE*GGQQQL
Trigger: TAGCTGCTGTTGACCTCCCCACTCCCACGCTGCCCT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACTGGCAGTCCAAGGCCTaGGCCAGAGGTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDWQSKA*ARGKPM
Trigger: CATGGGCTTACCTCTGGCCCAGGCCTTGGACTGCCA...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCTGGCAGTCCAAGGCCTaGGCCAGAGGTAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLWQSKA*ARGKPM
Trigger: CATGGGCTTACCTCTGGCCCAGGCCTTGGACTGCCA...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCACTGGCAGCAGGAGGTaGTGGACGCGTGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLTGSRR*WTRAWS
Trigger: ACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGT...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTTGCAGAGGTCGTACTaGCAGCAGGAGGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVLQRSY*QQEVVD
Trigger: GTCCACCACCTCCTGCTGCCAGTACGACCTCTGCAA...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGAGGTCGTGTGGTGGTTaGGGGAGGTCGGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRRSCGG*GRSGVF
Trigger: GAAGACACCCGACCTCCCCCAACCACCACACGACCT...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGCGAAGTGAGGTCGTGTaGTGGTTGGGGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSRSEVV*WLGEVG
Trigger: CCCGACCTCCCCCAACCACCACACGACCTCACTTCG...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGAAAGCCGGACACTTTTaGGATCCCACACAGCATCGA +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLKAGHF*DPTQHR
Trigger: TCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCTGCCAGCTTCAGGCCTaGTGCCCTCCCCGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFCQLQA*CPPREG
Trigger: CCCCTCACGGGGAGGGCACCAGGCCTGAAGCTGGCA...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCTTTGCCTTGCTCGGCTaGGTCCTGCTGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPFALLG*VLLWLG
Trigger: CCCCAACCACAGCAGGACCCAGCCGAGCAAGGCAAA...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGACCCTGCCCTCCCAGTaGGTGCATCCCCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKTLPSQ*VHPQVE
Trigger: TTCCACCTGGGGATGCACCCACTGGGAGGGCAGGGT...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCTACCTGCATCGGGGATaGATTGGTGCGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGYLHRG*IGACWA
Trigger: AGCCCAACACGCACCAATCCATCCCCGATGCAGGTA...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCGTGCAGCGTGACCGCTaGCACCAAAAGGTCTCACGC +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPVQRDR*HQKVSR
Trigger: GCGTGAGACCTTTTGGTGCCAGCGGTCACGCTGCAC...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTAGGAGACCCCTGGGGTaGAGACCCTCATTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGRRPLG*RPSFPD
Trigger: ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCT...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCTGCAAGGAGACCCCTaGGGTGGAGACCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLLQGDP*GGDPHS
Trigger: GGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTTGCCCATCTTCCCTCTaGGGAGTCACGTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGCPSSL*GVTFLP
Trigger: CGGGAGGAACGTGACTCCCCAGAGGGAAGATGGGCA...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCTGCCCATCTTCCCTCTaGGGAGTCACGTTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPCPSSL*GVTFLP
Trigger: CGGGAGGAACGTGACTCCCCAGAGGGAAGATGGGCA...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATACTCCTTCCCAGCTCTaGGCCCAGTATGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHTPSQL*AQYDAH
Trigger: ATGGGCATCATACTGGGCCCAGAGCTGGGAAGGAGT...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATGCAGGTGGGGGCCCTTaGGAGCTCTGGGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANAGGGP*ELWEAP
Trigger: AGGTGCCTCCCAGAGCTCCCAAGGGCCCCCACCTGC...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCATCCCAAGGCATCGCTaGCTGCAGCTGAGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPIPRHR*LQLRGP
Trigger: AGGCCCTCTCAGCTGCAGCCAGCGATGCCTTGGGAT...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGCACCCAACCCGACAATaGGCTTGCGCAAGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSHPTRQ*ACASRA
Trigger: TGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTG...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTAACCATGTGTGGGGCTaGGACAGGTCAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGNHVWG*DRSGWW
Trigger: CCACCACCCTGACCTGTCCCAGCCCCACACATGGTT...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCAGGAACCCCAGCTGGTaGGAGAAGCGGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPRNPSW*EKRLHC
Trigger: ACAGTGCAGCCGCTTCTCCCACCAGCTGGGGTTCCT...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGTCCACACAGACAGTaGCAACAGCTAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLGPHRQ*QQLALG
Trigger: GCCCAGGGCTAGCTGTTGCCACTGTCTGTGTGGACC...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCGGTCCACACAGACAGTaGCAACAGCTAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPGPHRQ*QQLALG
Trigger: GCCCAGGGCTAGCTGTTGCCACTGTCTGTGTGGACC...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACGAGATCCTGAGGGGCTaGCAGATTCAGGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDEILRG*QIQALP
Trigger: AGGGAGGGCCTGAATCTGCCAGCCCCTCAGGATCTC...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCAATGAAGCTCAGGGCTaGGCGGAAGCTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTNEAQG*AEAGRA
Trigger: AGCCCTGCCAGCTTCCGCCCAGCCCTGAGCTTCATT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACAATGAAGCTCAGGGCTaGGCGGAAGCTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDNEAQG*AEAGRA
Trigger: AGCCCTGCCAGCTTCCGCCCAGCCCTGAGCTTCATT...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGGCCCTGGGAAGCACCTaGACCCCAGAACATAAGACA +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGALGST*TPEHKT
Trigger: TGTCTTATGTTCTGGGGTCCAGGTGCTTCCCAGGGC...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGTCGGTGAGACGACGCTaGACGCTGGTTAGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARSVRRR*TLVRVR
Trigger: CCTTACCCTAACCAGCGTCCAGCGTCGTCTCACCGA...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTCGGTGAGACGACGCTaGACGCTGGTTAGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGSVRRR*TLVRVR
Trigger: CCTTACCCTAACCAGCGTCCAGCGTCGTCTCACCGA...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGCCATGCGGGATGGCTTaGAGGGTTTCTCAGGACACC +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRPCGMA*RVSQDT
Trigger: GGTGTCCTGAGAAACCCTTCAAGCCATCCCGCATGG...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGAGATGTTCTCAGGAGACTaGAGCTGGGCACTCAGAACC +
Preference number: 4 (lower is better)
Translates to: HSIERSRPRSEVVWWLGEMFSGD*SWALRT
Trigger: GGTTCTGAGTGCCCAGCTTCAGTCTCCTGAGAACAT...CTCCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTCGTCCATCGCCACCTTaGTGCATACAACCCGGACAA +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGRPSPP*CIQPGQ
Trigger: TTGTCCGGGTTGTATGCATCAAGGTGGCGATGGACG...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTGCGAGCTGAGGTTTaGAGAGGAGAGCAGACCACC +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDLRAEV*RGEQTT
Trigger: GGTGGTCTGCTCTCCTCTTCAAACCTCAGCTCGCAG...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTTCGCCGGTAGGTGCCTaGCTGAGTCTAATCGTAGGC +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLSPVGA*LSLIVG
Trigger: GCCTACGATTAGACTCAGGCAGGCACCTACCGGCGA...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR GCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGGTTCTTGAGTGGGTCTaGCTCGGGGGCTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARVLEWV*LGGFRG
Trigger: TCCTCTAAAGCCCCCGAGGCAGACCCACTCAAGAAC...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCCTGCGTCTTTTGCCTTaGTCGGCTGGGTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPLRLLP*SAGSCC
Trigger: ACAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAG...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTCGCATCCCCCAGTCCTaGGTCTTTTGCCTTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCRIPQS*VFCLAR
Trigger: CCGAGCAAGGCAAAAGACGCAGGACTGGGGGATGCG...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGATCCCCCAGGGGTCCTaGATCAAAGCTCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARIPQGS*IKALEM
Trigger: CATCTCCAGAGCTTTGATGCAGGACCCCTGGGGGAT...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATACCCCGGGCCGGTCCTaGTCTCCAGGCTTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANTPGRS*SPGLGL
Trigger: TAGCCCTAAGCCTGGAGAGCAGGACCGGCCCGGGGT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCCGACAATGGGCTTaGGCAAGCCGCGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLTRQWA*ASRAVT
Trigger: AGTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGT...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCCCGGTTCCCTGGTGCTaGACAGCCACGCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFPVPWC*TATHSP
Trigger: TGGGGAGTGCGTGGCTGTGCAGCACCAGGGAACCGG...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCGTGCCGGTTCCCTGGTaGTGCACAGCCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFVPVPW*CTATHS
Trigger: GGAGTGCGTGGCTGTGCAGCACCAGGGAACCGGCAC...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCGGGCTGCTATACAGTaGTCAGGGCCACAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLRAAIQ*SGPQCS
Trigger: ACTGCACTGTGGCCCTGAGCACTGTATAGCAGCCCG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCGGTGGGAGAAGCGGCTaGACTGTGGTGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFGGRSG*TVVQGV
Trigger: CACCCCCTGCACCACAGTGCAGCCGCTTCTCCCACC...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCGATTCAGGCCCTCCCTaGGAGCTGAGGTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVDSGPP*ELRFEE
Trigger: CTCTTCAAACCTCAGCTCGCAGGGAGGGCCTGAATC...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCTTCAGCGGGCACTTATaGCCACGACCAGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLFSGHL*PRPAEP
Trigger: TGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAA...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGCTGGTCTACTGGGAGTaGTGCAACCGCCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKLVYWE*CNRLPE
Trigger: CTCGGGAAGGCGGTTGCAGCACTCCCAGTAGACCAG...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS-3UTR CCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGGATCCAACTCAGGGGTaGCGCACAGAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARDPTQG*RTEDPT
Trigger: AGTTGGATCCTCTGTGCGCCACCCCTGAGTTGGATC...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTACTGGCAGCAGGAGGTaGTGGACGCGTGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCTGSRR*WTRAWS
Trigger: ACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGT...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATAGCTTTGTTCTTGAGTaGGTCTGCCTCGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHSFVLE*VCLGGF
Trigger: AAAGCCCCCGAGGCAGACCCACTCAAGAACAAAGCT...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGAGTGAGGTCGTGTGGTaGTTGGGGGAGGTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSSEVVW*LGEVGC
Trigger: ACACCCGACCTCCCCCAACCACCACACGACCTCACT...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGAGTGAGGTCGTGTGGTaGTTGGGGGAGGTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKSEVVW*LGEVGC
Trigger: ACACCCGACCTCCCCCAACCACCACACGACCTCACT...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTTTTGCCTTGCTCGGCTaGGTCCTGCTGTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCFALLG*VLLWLG
Trigger: CCCCAACCACAGCAGGACCCAGCCGAGCAAGGCAAA...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATTGGATTGGTGCGTGTTaGGCTGACCCCTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDWIGAC*ADPCFP
Trigger: TGGGAAGCAGGGGTCAGCCCAACACGCACCAATCCA...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTACCTGCATCGGGGATaGATTGGTGCGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGYLHRG*IGACWA
Trigger: AGCCCAACACGCACCAATCCATCCCCGATGCAGGTA...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGTCAGGACACCAGAGCTaGGAGCACTGGTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLSGHQS*EHWSGG
Trigger: CCCACCTGACCAGTGCTCCCAGCTCTGGTGTCCTGA...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCCCTGCCCATGCGGGATaGCTTGAAGGGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLPAHAG*LEGFLR
Trigger: CCTGAGAAACCCTTCAAGCCATCCCGCATGGGCAGG...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACACCAGGGCCATACTTTaGGGCCGGGACAATCCTACC +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDTRAIL*GRDNPT
Trigger: GGTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGT...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCAGGAGACCCCTGGGGTaGAGACCCTCATTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPRRPLG*RPSFPD
Trigger: ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCT...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCAGGGCCACAGTGCAGTaGGGGGACCCACGTCCATCG +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFRATVQ*GDPRPS
Trigger: CGATGGACGTGGGTCCCCCCACTGCACTGTGGCCCT...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGGGCTTCTCAAACCTCTaGTTCCACTTTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRGFSNL*FHFSPF
Trigger: AAAAGGAGAAAAGTGGAACCAGAGGTTTGAGAAGCC...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGCACCGGCAGAAAAGCTaGCATATCCACCGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRHRQKS*HIHRGP
Trigger: AGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTG...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGCAGCGCATGGGGTTaGAGCAGTTGTCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCGSAWG*SSCLRC
Trigger: ACAACGGAGACAACTGCTTCAACCCCATGCGCTGCC...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGGCAGCGCATGGGGTTaGAGCAGTTGTCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLGSAWG*SSCLRC
Trigger: ACAACGGAGACAACTGCTTCAACCCCATGCGCTGCC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACGTCAAGGGGTTTGACTaGGAGGACACACACCCCTTG +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDVKGFD*EDTHPL
Trigger: CAAGGGGTGTGTGTCCTCTCAGTCAAACCCCTTGAC...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAAACGTCAAGGGGTTTaGCTGAGAGGACACACACCC +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARKRQGV*LRGHTP
Trigger: GGGTGTGTGTCCTCTCAGTCAAACCCCTTGACGTTT...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TCAGAACCAGCCCCAGGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGATGTTCTCAGGAGACTaGAGCTGGGCACTCAGAACC +
Preference number: 4 (lower is better)
Translates to: SEPAPGAERRPAYRLTARMFSGD*SWALRT
Trigger: GGTTCTGAGTGCCCAGCTTCAGTCTCCTGAGAACAT...CCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCCTGGGGCTGGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCTGGTGCAGGGGGTGGTaGGTGAGCGAGGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFWCRGW*VSEEAL
Trigger: TAGTGCCTCCTCGCTCACTCACCACCCCCTGCACCA...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGCTGCGAGCTGAGGTTTaGAGAGGAGAGCAGACCACC +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKLRAEV*RGEQTT
Trigger: GGTGGTCTGCTCTCCTCTTCAAACCTCAGCTCGCAG...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTTTATTTACGGCTCGGTaGGACGACGCTGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCLFTAR*DDAGRW
Trigger: CCAGCGTCCAGCGTCGTCTCACCGAGCCGTAAATAA...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGGTCTACTGGGAGTGCTaGAACCCTGTGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWVYWEC*NPVTFT
Trigger: GGTGAAGGTCACAGGGTTGCAGCACTCCCAGTAGAC...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR GCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCCTGGTCTACTGGGAGTaGTGCAACCCTGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPLVYWE*CNPVTF
Trigger: GAAGGTCACAGGGTTGCAGCACTCCCAGTAGACCAG...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCTGGTCTACTGGGAGTaGTGCAACCCTGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLLVYWE*CNPVTF
Trigger: GAAGGTCACAGGGTTGCAGCACTCCCAGTAGACCAG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR GCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGTTCTTGAGTGGGTCTaGCTCGGGGGCTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGVLEWV*LGGFRG
Trigger: TCCTCTAAAGCCCCCGAGGCAGACCCACTCAAGAAC...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTCAGTCCTGCGTCTTTTaGCTTGCTCGGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCQSCVF*LARLGP
Trigger: AGGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTG...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCTGCCCTCCCAGTGGGTaGATCCCCAGGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFCPPSG*IPRWKV
Trigger: CACCTTCCACCTGGGGATGCACCCACTGGGAGGGCA...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCACCCAAGGTCCCTTTaGAGAAGACTGGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLHPRSL*RRLALS
Trigger: GGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCCCCGGACAAGTTTACTaGTGTGATTTCTGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPPGQVY*CDFCRR
Trigger: GCGCCGGCAGAAATCACAGCAGTAAACTTGTCCGGG...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGGATTCAGGCCCTCCCTaGGAGCTGAGGTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWDSGPP*ELRFEE
Trigger: CTCTTCAAACCTCAGCTCGCAGGGAGGGCCTGAATC...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGAGCTCCTGGTCTACTaGGAGTGCTGCAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLELLVY*ECCNPV
Trigger: CACAGGGTTGCAGCACTCCCAGTAGACCAGGAGCTC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATGCCTCCCGGAGCTCCTaGTCTACTGGGAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANASRSS*STGSAA
Trigger: TGCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGC...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGATCCAACTCAGGGGTaGCGCACAGAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGDPTQG*RTEDPT
Trigger: AGTTGGATCCTCTGTGCGCCACCCCTGAGTTGGATC...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGTAGTAGGTGCGCGTaGTCATGCAGTAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVCSRCA*SCSRQP
Trigger: TGGTTGCCTACTGCATGACCACGCGCACCTACTACA...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCCGAAGTGAGGTCGTGTaGTGGTTGGGGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFRSEVV*WLGEVG
Trigger: CCCGACCTCCCCCAACCACCACACGACCTCACTTCG...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATACCCTGCCCTCCCAGTaGGTGCATCCCCAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANTLPSQ*VHPQVE
Trigger: TTCCACCTGGGGATGCACCCACTGGGAGGGCAGGGT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTACCTGCATCGGGGATaGATTGGTGCGTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWYLHRG*IGACWA
Trigger: AGCCCAACACGCACCAATCCATCCCCGATGCAGGTA...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGGACAATCCTACCACATaGATATGTCACCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWDNPTT*ICHHPA
Trigger: GGCAGGATGGTGACATATCCATGTGGTAGGATTGTC...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGAGGAGACCCCTGGGGTaGAGACCCTCATTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLRRPLG*RPSFPD
Trigger: ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCT...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGGAGGAGGCACTAGTGTaGGGCAGCTACTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKEEALV*GSYFTS
Trigger: GGAGGTGAAGTAGCTGCCCCACACTAGTGCCTCCTC...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATCCAAGGAACCCCAGCTaGTGGGAGAAGCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANPRNPS*WEKRLH
Trigger: GTGCAGCCGCTTCTCCCACCAGCTGGGGTTCCTTGG...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATGCACGCAGGACTTACTaGCCTTCATCCTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANARRTY*PSSWWG
Trigger: CCCCCACCAGGATGAAGGTCAGTAAGTCCTGCGTGC...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCAAACGTCAAGGGGTTTaGCTGAGAGGACACACACCC +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTKRQGV*LRGHTP
Trigger: GGGTGTGTGTCCTCTCAGTCAAACCCCTTGACGTTT...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATATGTTCTCAGGAGACTaGAGCTGGGCACTCAGAACC +
Preference number: 4 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDMFSGD*SWALRT
Trigger: GGTTCTGAGTGCCCAGCTTCAGTCTCCTGAGAACAT...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCATCGCTGGCTGCAGCTaGGAGGGCCTCATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFIAGCS*EGLIWA
Trigger: TGCCCAAATGAGGCCCTCTCAGCTGCAGCCAGCGAT...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCTCCCCATCACCCCACTaGGACTCGAGACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFSPSPH*DSRQGG
Trigger: TCCTCCCTGTCTCGAGTCTCAGTGGGGTGATGGGGA...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCCCAAGCAGCCACTCCTaGGTCACTCGGGCATGTCCA +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFPSSHS*VTRACP
Trigger: TGGACATGCCCGAGTGACTCAGGAGTGGCTGCTTGG...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGACCAAATCGCCTTCATaGGAGATGACGAATCAGATG +
Preference number: 4 (lower is better)
Translates to: GAERRPAYRLTARRPLGWTKSPS*EMTNQM
Trigger: CATCTGATTCGTCATCTCTCATGAAGGCGATTTGGT...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATATGCCCACGACCAGCTaGGCCAGACCAGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANMPTTS*ARPAFP
Trigger: TGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCAT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACAATGCGAATCTGTTaGTTTATTTACGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLTMRIC*FIYGSV
Trigger: CACCGAGCCGTAAATAAATCAACAGATTCGCATTGT...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000621401.4
CDS-3UTR GCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATACCCGACAATGGGCTTaGGCAAGCCGCGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANTRQWA*ASRAVT
Trigger: AGTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTTGTAGTAGGTGCGCGTaGTCATGCAGTAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGCSRCA*SCSRQP
Trigger: TGGTTGCCTACTGCATGACCACGCGCACCTACTACA...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTTGGTGGACGCGTGCTTaGAGTAGCCATCATACACAG +
Preference number: 4 (lower is better)
Translates to: LGSHTASKGQGLEVRSCGWWTRA*SSHHTQ
Trigger: CTGTGTATGATGGCTACTCCAAGCACGCGTCCACCA...ACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTAGCTTTGTTCTTGAGTaGGTCTGCCTCGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLSFVLE*VCLGGF
Trigger: AAAGCCCCCGAGGCAGACCCACTCAAGAACAAAGCT...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATAGGTCGTGTGGTGGTTaGGGGAGGTCGGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANRSCGG*GRSGVF
Trigger: GAAGACACCCGACCTCCCCCAACCACCACACGACCT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATAGTGAGGTCGTGTGGTaGTTGGGGGAGGTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANSEVVW*LGEVGC
Trigger: ACACCCGACCTCCCCCAACCACCACACGACCTCACT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCAAAGCCGGACACTTTTaGGATCCCACACAGCATCGA +
Preference number: 4 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVKAGHF*DPTQHR
Trigger: TCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCCTGCATCAAAGCTCTaGAGATGCAATTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHPASKL*RCNFQQ
Trigger: CTGCTGGAAATTGCATCTCCAGAGCTTTGATGCAGG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCTCCTCCAGCGGGAACTaGGTGTGCCCTCAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFSSSGN*VCPQQD
Trigger: GTCTTGCTGAGGGCACACCCAGTTCCCGCTGGAGGA...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTACTCCTTCCCAGCTCTaGGCCCAGTATGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCTPSQL*AQYDAH
Trigger: ATGGGCATCATACTGGGCCCAGAGCTGGGAAGGAGT...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCCGCACTCCCCATGAGTaGGCCTGCCCAGCATTAGCT +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFRTPHE*ACPALA
Trigger: AGCTAATGCTGGGCAGGCCCACTCATGGGGAGTGCG...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATAGGAACCCCAGCTGGTaGGAGAAGCGGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANRNPSW*EKRLHC
Trigger: ACAGTGCAGCCGCTTCTCCCACCAGCTGGGGTTCCT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCGAGAGATCCCCGAAGTaGGAACTGGGCCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFERSPK*ELGPHG
Trigger: ACCATGGGGGCCCAGTTCCCACTTCGGGGATCTCTC...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGGCCCTGGGAAGCACCTaGACCCCAGAACATAAGACA +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLALGST*TPEHKT
Trigger: TGTCTTATGTTCTGGGGTCCAGGTGCTTCCCAGGGC...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACAAGTTTACTGCTGTaGTTTCTGCCGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLTSLLL*FLPALL
Trigger: CAGCAGCGCCGGCAGAAATCACAGCAGTAAACTTGT...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTACAAGTTTACTGCTGTaGTTTCTGCCGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCTSLLL*FLPALL
Trigger: CAGCAGCGCCGGCAGAAATCACAGCAGTAAACTTGT...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATACCAAATCGCCTTCATaGGAGATGACGAATCAGATG +
Preference number: 4 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHTKSPS*EMTNQM
Trigger: CATCTGATTCGTCATCTCTCATGAAGGCGATTTGGT...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp ACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGGTGGACGCGTGCTTaGAGTAGCCATCATACACAG +
Preference number: 4 (lower is better)
Translates to: TLLGSHTASKGQGLEVRSWWTRA*SSHHTQ
Trigger: CTGTGTATGATGGCTACTCCAAGCACGCGTCCACCA...CGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACACACACACCCCTTGCTaGACCCGAAAAAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDTHTPC*TRKSFC
Trigger: ACAGAAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGT...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCACACACACCCCTTGCTaGACCCGAAAAAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLTHTPC*TRKSFC
Trigger: ACAGAAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGT...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCCCCTTTGCAGAAGACTaGCACTGTCCTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFPFAED*HCPPPA
Trigger: CGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGG...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATTCGGTGAGACGACGCTaGACGCTGGTTAGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANSVRRR*TLVRVR
Trigger: CCTTACCCTAACCAGCGTCCAGCGTCGTCTCACCGA...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATGTTCTTGAGTGGGTCTaGCTCGGGGGCTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSQTSIPISPPLTPQDANVLEWV*LGGFRG
Trigger: TCCTCTAAAGCCCCCGAGGCAGACCCACTCAAGAAC...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTAAAGCCGGACACTTTTaGGATCCCACACAGCATCGA +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCKAGHF*DPTQHR
Trigger: TCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCCCTGCATCAAAGCTCTaGAGATGCAATTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PYFGAGTILPHGYVTILPPASKL*RCNFQQ
Trigger: CTGCTGGAAATTGCATCTCCAGAGCTTTGATGCAGG...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGGGCTTCTCAAACCTCTaGTTCCACTTTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGGFSNL*FHFSPF
Trigger: AAAAGGAGAAAAGTGGAACCAGAGGTTTGAGAAGCC...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGCGCCTTCATGAGAGATaGCGAATCAGATGCTACATA +
Preference number: 4 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRRLHER*RIRCYI
Trigger: TATGTAGCATCTGATTCGTCATCTCTCATGAAGGCG...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCGCCTTCATGAGAGATaGCGAATCAGATGCTACATA +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDRLHER*RIRCYI
Trigger: TATGTAGCATCTGATTCGTCATCTCTCATGAAGGCG...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGACAATCCTACCACATaGATATGTCACCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCDNPTT*ICHHPA
Trigger: GGCAGGATGGTGACATATCCATGTGGTAGGATTGTC...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGGGCCCTTGGGAGCTCTaGGAGGCACCTGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMGPWEL*EAPGSL
Trigger: GAGGCTGCCAGGTGCCTCCCAGAGCTCCCAAGGGCC...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGCGCCTTCATGAGAGATaGCGAATCAGATGCTACATA +
Preference number: 4 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLRLHER*RIRCYI
Trigger: TATGTAGCATCTGATTCGTCATCTCTCATGAAGGCG...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACACAATGCGAATCTGTTaGTTTATTTACGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: STGRKAGISTEGLSASFDTMRIC*FIYGSV
Trigger: CACCGAGCCGTAAATAAATCAACAGATTCGCATTGT...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000621401.4
CDS-3UTR GCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGCTGGGGCTTCCACCCTaGCCTCCCAGTGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMLGLPP*PPSGCI
Trigger: GATGCACCCACTGGGAGGGCAGGGTGGAAGCCCCAG...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCGGCTTCTCAAACCTCTaGTTCCACTTTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ELRFEEESRPPRVVGESTGFSNL*FHFSPF
Trigger: AAAAGGAGAAAAGTGGAACCAGAGGTTTGAGAAGCC...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGTCTCACGCCCCCGAATaGCCCATTCACAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMSHAPE*PIHSRG
Trigger: GCCCCTGCTGTGAATGGGGCATTCGGGGGCGTGAGA...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGAGGTCGCAGGGAGTGTaGAGGGTGAGGCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMRSQGV*RVRQGE
Trigger: CTCACCCTGCCTCACCCTCCACACTCCCTGCGACCT...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCGACAATCCTACCACATaGATATGTCACCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: AGISTEGLSASFDLFQSFDNPTT*ICHHPA
Trigger: GGCAGGATGGTGACATATCCATGTGGTAGGATTGTC...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR TCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGGCCCTCCCTGCGAGCTaGGGTTTGAAGAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMALPAS*GLKRRA
Trigger: TGCTCTCCTCTTCAAACCTCAGCTCGCAGGGAGGGC...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGCCGCTCGCCGGTAGGTaGCTGCCTGAGTCTAATCGT +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMPLAGR*LPESNR
Trigger: ACGATTAGACTCAGGCAGGCACCTACCGGCGAGCGG...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGAGTGAGGTCGTGTGGTaGTTGGGGGAGGTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMSEVVW*LGEVGC
Trigger: ACACCCGACCTCCCCCAACCACCACACGACCTCACT...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGTCCTCCAGCGGGAACTaGGTGTGCCCTCAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMSSSGN*VCPQQD
Trigger: GTCTTGCTGAGGGCACACCCAGTTCCCGCTGGAGGA...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGCTGCGTCTTTTGCCTTaGTCGGCTGGGTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMLRLLP*SAGSCC
Trigger: ACAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAG...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGCAGTCCTGCGTCTTTTaGCTTGCTCGGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMQSCVF*LARLGP
Trigger: AGGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTG...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR GCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGGACAGGAGGGAGAGATaGCATCCATTCAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMDRRER*HPFSGH
Trigger: GTGCCCGCTGAATGGATGGCATCTCTCCCTCCTGTC...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGTTGCAGAGGTCGTACTaGCAGCAGGAGGTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMLQRSY*QQEVVD
Trigger: GTCCACCACCTCCTGCTGCCAGTACGACCTCTGCAA...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGGAGGAGGCACTAGTGTaGGGCAGCTACTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMEEALV*GSYFTS
Trigger: GGAGGTGAAGTAGCTGCCCCACACTAGTGCCTCCTC...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CCA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGACACACACCCCTTGCTaGACCCGAAAAAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMTHTPC*TRKSFC
Trigger: ACAGAAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGT...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS CCA 90 bp GTGGTGCGCAGAGGACGTGGGGCCGGCCCTGCCTCCCGGAGCTCCTaGTCTACTGGGAGTGCTGCAACCGTGTTCAGCCCGGACACTCCG +
Preference number: 5 (lower is better)
Translates to: VVRRGRGAGPASRSS*STGSAATVFSPDTP
Trigger: CGGAGTGTCCGGGCTGAACACGGTTGCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621401.4
CDS GCA 90 bp GGATCCAACTCAGGGGTGGCGCACAGAGGATCCAACTCAGGGTGGTaGGCAGAGGACGTGGGGCCGGCCCTGCCTCCCGGAGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: GSNSGVAHRGSNSGW*AEDVGPALPPGAPG
Trigger: ACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCCTCTGTGCGCCACCCCTGAGTTGGATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000613110.4
ENST00000614268.4
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS GCA 90 bp GAGGATCCAACTCAGGGTGGTGCGCAGAGGACGTGGGGCCGGCCCTaGCTCCCGGAGCTCCTGGTCTACTGGGAGTGCTGCAACCCCAGG +
Preference number: 5 (lower is better)
Translates to: EDPTQGGAQRTWGRP*LPELLVYWECCNPR
Trigger: CCTGGGGTTGCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614268.4
CDS CCA 90 bp CCTGGATCCAACTCAGGGGTGGCGCACAGAGGATCCAACTCAGGGTaGTGCGCAGAGGACGTGGGGCCGGCCCTGCCTCCCGGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: PGSNSGVAHRGSNSG*CAEDVGPALPPGAP
Trigger: AGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCCTCTGTGCGCCACCCCTGAGTTGGATCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000613110.4
ENST00000614268.4
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS GCA 90 bp GAGGATCCAACTCAGGGTGGTGCGCAGAGGACGTGGGGCCGGCCCTaGCTCCCGGAGCTCCTGGTCTACTGGGAGTGCTGCAACCCTGTG +
Preference number: 5 (lower is better)
Translates to: EDPTQGGAQRTWGRP*LPELLVYWECCNPV
Trigger: CACAGGGTTGCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613110.4
ENST00000614491.1
ENST00000652477.1
CDS GCA 90 bp GAGGATCCAACTCAGGGTGGTGCGCAGAGGACGTGGGGCCGGCCCTaGCTCCCGGAGCTCCTGGTCTACTGGGAGTGCTGCAACCGCCTT +
Preference number: 5 (lower is better)
Translates to: EDPTQGGAQRTWGRP*LPELLVYWECCNRL
Trigger: AAGGCGGTTGCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS-3UTR CAA 90 bp GCCCAAAGCCGCCTCCCTCCCGGTAAGCATCCCAAGGCATCGCTGGCTGCAGCTTGGGTCCTGCTGTGGTaGGGGACCAGGACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: AQSRLPPGKHPKASLAAAWVLLW*GTRTRG
Trigger: CCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCCA...AGCTGCAGCCAGCGATGCCTTGGGATGCTTACCGGGAGGGAGGCGGCTTTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS GCA 90 bp GAGGATCCAACTCAGGGTGGTGCGCAGAGGACGTGGGGCCGGCCCTaGCTCCCGGAGCTCCTGGTCTACTGGGAGTGCTGCAACCGTGTT +
Preference number: 5 (lower is better)
Translates to: EDPTQGGAQRTWGRP*LPELLVYWECCNRV
Trigger: AACACGGTTGCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621401.4
CDS-3UTR CAA 90 bp CACCCTCCCCACTCCCGCCCCCGCACGGCCACGAGAGGGTGGCATGCTCCGCCTGAAACGTCAAGGGGTTaGACTGAGAGGACACACACC +
Preference number: 5 (lower is better)
Translates to: HPPHSRPRTATRGWHAPPETSRG*TERTHT
Trigger: GGTGTGTGTCCTCTCAGTCAAACCCCTTGACGTTTC...AGGCGGAGCATGCCACCCTCTCGTGGCCGTGCGGGGGCGGGAGTGGGGAGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCCTGAGAGGGCCTCATTaGGGCACTGCCCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KGPPPTALIPYRSWQLLALRGPH*GTALRL
Trigger: CAGCCTCAGGGCAGTGCCCAAATGAGGCCCTCTCAG...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS CCA 90 bp GTGGTGCGCAGAGGACGTGGGGCCGGCCCTGCCTCCCGGAGCTCCTaGTCTACTGGGAGTGCTGCAACCGCCTTCCCGAGAACAACAAAT +
Preference number: 5 (lower is better)
Translates to: VVRRGRGAGPASRSS*STGSAATAFPRTTN
Trigger: ATTTGTTGTTCTCGGGAAGGCGGTTGCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS-3UTR CAA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGCCTGCGTCTTTTGCCTaGCTCGGCTGGGTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRPASFA*LGWVLL
Trigger: CAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAGG...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTCCAGTCCTGCGTCTTTaGCCTTGCTCGGCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSPVLRL*PCSAGS
Trigger: GGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTGG...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp AAAGGCCCTCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCGACCAGGGCCATACTTaGGGGCCGGGACAATCCTAC +
Preference number: 5 (lower is better)
Translates to: KGPPPTALIPYRSWQLLADQGHT*GPGQSY
Trigger: GTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGTC...GGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGAGGGCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS CCA 90 bp GAGTGGGGAGGTCAACAGCAGCTAGCCCTGGATCCAACTCAGGGGTaGCGCACAGAGGATCCAACTCAGGGTGGTGCGCAGAGGACGTGG +
Preference number: 5 (lower is better)
Translates to: EWGGQQQLALDPTQG*RTEDPTQGGAQRTW
Trigger: CCACGTCCTCTGCGCACCACCCTGAGTTGGATCCTCTGTGCGCCACCCCTGAGTTGGATCCAGGGCTAGCTGCTGTTGACCTCCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000613110.4
ENST00000614268.4
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CCCTGGCTGAGGAAGCCACCCAACCCGACAATGGGCTTGCGCAAGCCGCGCAGTTCGAGAGCTTTGTTCTaGAGTGGGTCTGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PWLRKPPNPTMGLRKPRSSRALF*SGSASG
Trigger: CCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGA...ACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTTGGGTGGCTTCCTCAGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGGAGGTCGTGTGGTGGTaGGGGGAGGTCGGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLEVVWW*GEVGCL
Trigger: AAGACACCCGACCTCCCCCAACCACCACACGACCTC...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS CCA 90 bp CGTTGCAGAGGTCGTACTGGCAGCAGGAGGTGGTGGACGCGTGCTTaGAGTAGCCATCATACACAGTCTCGAAGCAGCGGGGCACGCAGG +
Preference number: 5 (lower is better)
Translates to: RCRGRTGSRRWWTRA*SSHHTQSRSSGARR
Trigger: CCTGCGTGCCCCGCTGCTTCGAGACTGTGTATGATGGCTACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGTACGACCTCTGCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TCCTCCCACAGCCCTGATCCCGTACCGGTCCTGGCAGCTCCTGGCCTCAGTAGGCAAAGCCGGACACTTTaGGGATCCCACACAGCATCG +
Preference number: 5 (lower is better)
Translates to: SSHSPDPVPVLAAPGLSRQSRTL*GSHTAS
Trigger: CGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTTG...CCTACTGAGGCCAGGAGCTGCCAGGACCGGTACGGGATCAGGGCTGTGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp ATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCCACCTGCGGGCATTCCTaGTCTTCCCCCTGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: IDSLQGDPWGGDPHSLIPTCGHS*SSPCPS
Trigger: GCTGGGGCAGGGGGAAGACAAGGAATGCCCGCAGGT...GGGGATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGTCCTGCTGTGGTaGGGGACCAGGACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGWVLLW*GTRTRG
Trigger: CCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCCA...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GTGAGGTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGTGCATCGGGGATGGATaGGTGCGTGTTGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: VRSCGGWGRSGVFLPTVLCIGDG*VRVGLT
Trigger: GGTCAGCCCAACACGCACCAATCCATCCCCGATGCA...CAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGACCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS CCA 90 bp CAAGGCCGGTGCCGTTGCAGAGGTCGTACTGGCAGCAGGAGGTGGTaGACGCGTGCTTGGAGTAGCCATCATACACAGTCTCGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: QGRCRCRGRTGSRRW*TRAWSSHHTQSRSS
Trigger: GCTGCTTCGAGACTGTGTATGATGGCTACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGTACGACCTCTGCAACGGCACCGGCCTTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS CCA 90 bp TGGCAAGGCCGGTGCCGTTGCAGAGGTCGTACTGGCAGCAGGAGGTaGTGGACGCGTGCTTGGAGTAGCCATCATACACAGTCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: WQGRCRCRGRTGSRR*WTRAWSSHHTQSRS
Trigger: GCTTCGAGACTGTGTATGATGGCTACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGTACGACCTCTGCAACGGCACCGGCCTTGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS CCA 90 bp GGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTaGGTCTGCCTCGGGGGCTTTAGAGGAGACCCCAGAGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GCEGVAVCLESFVLE*VCLGGFRGDPRGWP
Trigger: TGGCCACCCTCTGGGGTCTCCTCTAAAGCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTGCAAGGCCGGTGCCGTaGCAGAGGTCGTACTGGCAG +
Preference number: 5 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGARPVP*QRSYWQ
Trigger: CTGCCAGTACGACCTCTGCAACGGCACCGGCCTTGC...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGGGGGCGAGGTCGTGTGGTGGTaGGGGGAGGTCGGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: GVAVCLESFVLEWVCLGGEVVWW*GEVGCL
Trigger: AAGACACCCGACCTCCCCCAACCACCACACGACCTC...GCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATCTGAGAGGGCCTCATTaGGGCACTGCCCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHLRGPH*GTALRL
Trigger: CAGCCTCAGGGCAGTGCCCAAATGAGGCCCTCTCAG...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAAAACCCGACAATGGGCTaGCGCAAGCCGCGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: FPPKVPLQKTGTVLLQRENPTMG*RKPRSD
Trigger: GTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTT...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS GCA 90 bp GAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTaGCTCGGGGGCTTTAGAGGAGACCCCAGAGGGTGGCCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EGVAVCLESFVLEWV*LGGFRGDPRGWPGG
Trigger: TCCTCCTGGCCACCCTCTGGGGTCTCCTCTAAAGCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TTCCCACCCAAGGTCCCTTTGCAGAAGACTGGCACTGTCCTCCTCCAGCGGGAAGGGCAGCGCATGGGGTaGAAGCAGTTGTCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: FPPKVPLQKTGTVLLQREGQRMG*KQLSPL
Trigger: CAACGGAGACAACTGCTTCAACCCCATGCGCTGCCC...TTCCCGCTGGAGGAGGACAGTGCCAGTCTTCTGCAAAGGGACCTTGGGTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGGGGCAGCGCATGGGGTaGAAGCAGTTGTCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGGQRMG*KQLSPL
Trigger: CAACGGAGACAACTGCTTCAACCCCATGCGCTGCCC...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCGCAAGGCCGGTGCCGTaGCAGAGGTCGTACTGGCAG +
Preference number: 5 (lower is better)
Translates to: PYFGAGTILPHGYVTILPARPVP*QRSYWQ
Trigger: CTGCCAGTACGACCTCTGCAACGGCACCGGCCTTGC...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCGAGGTCGTGTGGTGGTaGGGGGAGGTCGGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVEVVWW*GEVGCL
Trigger: AAGACACCCGACCTCCCCCAACCACCACACGACCTC...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCCCTGCGTCTTTTGCCTaGCTCGGCTGGGTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVPASFA*LGWVLL
Trigger: CAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAGG...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGGACCAGGGCCATACTTaGGGGCCGGGACAATCCTAC +
Preference number: 5 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGDQGHT*GPGQSY
Trigger: GTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGTC...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GTCGTGTGGTGGTTGGGGGAGGTCGGGTGTCTTCTTGCCCACAGTCCTGACCCTACGTCCATCGCCACCTaGATGCATACAACCCGGACA +
Preference number: 5 (lower is better)
Translates to: VVWWLGEVGCLLAHSPDPTSIAT*MHTTRT
Trigger: TGTCCGGGTTGTATGCATCAAGGTGGCGATGGACGT...AGGGTCAGGACTGTGGGCAAGAAGACACCCGACCTCCCCCAACCACCACACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS TCA 90 bp AGCCATCATACACAGTCTCGAAGCAGCGGGGCACGCAGGACTTACTaGCCTTCATCCTGGTGGGGGTGTAGTAGGTGCGCGTGGTCATGC +
Preference number: 5 (lower is better)
Translates to: SHHTQSRSSGARRTY*PSSWWGCSRCAWSC
Trigger: GCATGACCACGCGCACCTACTACACCCCCACCAGGATGAAGGTCAGTAAGTCCTGCGTGCCCCGCTGCTTCGAGACTGTGTATGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613110.4
ENST00000614268.4
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS GCA 90 bp CAACCGCCTTCCCGAGAACAACAAATCCGTCTCTCACGACACATTTaGCCAGGCCAACCCCAGGATGCCAAAGGCCAGAGTCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: QPPSREQQIRLSRHI*PGQPQDAKGQSQAC
Trigger: GCAGGCCTGACTCTGGCCTTTGGCATCCTGGGGTTGGCCTGGGCAAATGTGTCGTGAGAGACGGATTTGTTGTTCTCGGGAAGGCGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS-3UTR CAA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTACCTGCGGGCATTCCTaGTCTTCCCCCTGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCTCGHS*SSPCPS
Trigger: GCTGGGGCAGGGGGAAGACAAGGAATGCCCGCAGGT...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCCTGCGTCTTTTGCCTaGCTCGGCTGGGTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLPASFA*LGWVLL
Trigger: CAGCAGGACCCAGCCGAGCAAGGCAAAAGACGCAGG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCCAGTCCTGCGTCTTTaGCCTTGCTCGGCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: STGRKAGISTEGLSASFDPVLRL*PCSAGS
Trigger: GGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTGG...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCAGTCCTGCGTCTTTaGCCTTGCTCGGCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDPVLRL*PCSAGS
Trigger: GGACCCAGCCGAGCAAGGCAAAAGACGCAGGACTGG...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGAACCCGACAATGGGCTaGCGCAAGCCGCGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWNPTMG*RKPRSD
Trigger: GTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTT...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GAGCTGAGGTTTGAAGAGGAGAGCAGACCACCCAGAGTAGTGGGAGAAAGCACCGGGCAGCGCATGGGGTaGAAGCAGTTGTCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: ELRFEEESRPPRVVGESTGQRMG*KQLSPL
Trigger: CAACGGAGACAACTGCTTCAACCCCATGCGCTGCCC...GGTGCTTTCTCCCACTACTCTGGGTGGTCTGCTCTCCTCTTCAAACCTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GCTGGGTGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTCGAGAGCTTTGTTCTaGAGTGGGTCTGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: AGCEGVAVCLESFVLEWVSRALF*SGSASG
Trigger: CCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGA...GACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTCGAGAGCTTTGTTCTaGAGTGGGTCTGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: GSHTASKGQGLEVRSCGGSRALF*SGSASG
Trigger: CCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGA...ACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GGAGCAGAACGCAGGCCTGCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGTGTGTCTCGAGAGCTTaGTTCTTGAGTGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: GAERRPAYRLTARRPLGWCVSRA*FLSGSA
Trigger: GGCAGACCCACTCAAGAACAAAGCTCTCGAGACACA...CCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGCAGGCCTGCGTTCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGAGGTCGGGTGTCTTCTaGCCCACAGTCCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: FGIPHSIERSRPRSEVVWRSGVF*PTVLTL
Trigger: CAGGGTCAGGACTGTGGGCAAGAAGACACCCGACCT...CCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCAGGTCGGGTGTCTTCTaGCCCACAGTCCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: PYFGAGTILPHGYVTILPRSGVF*PTVLTL
Trigger: CAGGGTCAGGACTGTGGGCAAGAAGACACCCGACCT...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGGAGGTCGTGTGGTGGTaGGGGGAGGTCGGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKEVVWW*GEVGCL
Trigger: AAGACACCCGACCTCCCCCAACCACCACACGACCTC...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGGTGGTTGGGGGCAAAGCCGGACACTTTaGGGATCCCACACAGCATCG +
Preference number: 5 (lower is better)
Translates to: HTASKGQGLEVRSCGGWGQSRTL*GSHTAS
Trigger: CGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTTG...CCCCCAACCACCACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATGAGGACACACACCCCTaGCTGGACCCGAAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHEDTHP*LDPKKL
Trigger: AAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGTCCTC...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACCTTTTTCAGAGTTTCTGGGTCCTGCTGTGGTaGGGGACCAGGACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: AGISTEGLSASFDLFQSFWVLLW*GTRTRG
Trigger: CCCCCGAGTCCTGGTCCCCAACCACAGCAGGACCCA...GAAACTCTGAAAAAGGTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTGCATCGGGGATGGATaGGTGCGTGTTGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRCIGDG*VRVGLT
Trigger: GGTCAGCCCAACACGCACCAATCCATCCCCGATGCA...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp AGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGACGACCAGGGCCATACTTaGGGGCCGGGACAATCCTAC +
Preference number: 5 (lower is better)
Translates to: STGRKAGISTEGLSASFDDQGHT*GPGQSY
Trigger: GTAGGATTGTCCCGGCCCCAAAGTATGGCCCTGGTC...GTCAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGAACCCGACAATGGGCTaGCGCAAGCCGCGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKNPTMG*RKPRSD
Trigger: GTCACTGCGCGGCTTGCGCAAGCCCATTGTCGGGTT...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATACGTCCATCGCCACCTaGATGCATACAACCCGGACA +
Preference number: 5 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHTSIAT*MHTTRT
Trigger: TGTCCGGGTTGTATGCATCAAGGTGGCGATGGACGT...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp AAAGCACCGGCAGAAAAGCTGGCATATCCACCGAGGGCCTCTCTGCTTCTTTTGAGGTCGGGTGTCTTCTaGCCCACAGTCCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: KAPAEKLAYPPRASLLLLRSGVF*PTVLTL
Trigger: CAGGGTCAGGACTGTGGGCAAGAAGACACCCGACCT...CAAAAGAAGCAGAGAGGCCCTCGGTGGATATGCCAGCTTTTCTGCCGGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp GCATATAGACTCACTGCAAGGAGACCCCTGGGGTGGAGACCCTCATTCCCTGATCCCATGCGGGATGGCTaGAAGGGTTTCTCAGGACAC +
Preference number: 5 (lower is better)
Translates to: AYRLTARRPLGWRPSFPDPMRDG*KGFSGH
Trigger: GTGTCCTGAGAAACCCTTCAAGCCATCCCGCATGGG...ATCAGGGAATGAGGGTCTCCACCCCAGGGGTCTCCTTGCAGTGAGTCTATATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGCCCATGCGGGATGGCTaGAAGGGTTTCTCAGGACAC +
Preference number: 5 (lower is better)
Translates to: RTLLGSHTASKGQGLEVRPMRDG*KGFSGH
Trigger: GTGTCCTGAGAAACCCTTCAAGCCATCCCGCATGGG...CCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CCATACTTTGGGGCCGGGACAATCCTACCACATGGATATGTCACCATCCTGCCCCAAAGCCGGACACTTTaGGGATCCCACACAGCATCG +
Preference number: 5 (lower is better)
Translates to: PYFGAGTILPHGYVTILPQSRTL*GSHTAS
Trigger: CGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTTG...GGGCAGGATGGTGACATATCCATGTGGTAGGATTGTCCCGGCCCCAAAGTATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp ACTTATGCCCACGACCAGCTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTCAAAGCCGGACACTTTaGGGATCCCACACAGCATCG +
Preference number: 5 (lower is better)
Translates to: TYAHDQLSQTSIPISPPLQSRTL*GSHTAS
Trigger: CGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTTG...AAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCACGTCCATCGCCACCTaGATGCATACAACCCGGACA +
Preference number: 5 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLTSIAT*MHTTRT
Trigger: TGTCCGGGTTGTATGCATCAAGGTGGCGATGGACGT...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTTCTCTCACGACACATTaGCCCAGGCCAACCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCSLTTH*PRPTPG
Trigger: TCCTGGGGTTGGCCTGGGCAAATGTGTCGTGAGAGA...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS-3UTR CAA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATAGGTCGGGTGTCTTCTaGCCCACAGTCCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: LSQTSIPISPPLTPQDANRSGVF*PTVLTL
Trigger: CAGGGTCAGGACTGTGGGCAAGAAGACACCCGACCT...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGAGGTCGTGTGAGGACACACACCCCTaGCTGGACCCGAAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: LLGSHTASKGQGLEVRSCEDTHP*LDPKKL
Trigger: AAGCTTTTTCGGGTCCAGCAAGGGGTGTGTGTCCTC...ACACGACCTCACTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TGCGAGGGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTGGGTCTGCCTCGAAACGTCAAGGGGTTaGACTGAGAGGACACACACC +
Preference number: 5 (lower is better)
Translates to: CEGVAVCLESFVLEWVCLETSRG*TERTHT
Trigger: GGTGTGTGTCCTCTCAGTCAAACCCCTTGACGTTTC...GAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACCCTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATTGCATCGGGGATGGATaGGTGCGTGTTGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: LSQTSIPISPPLTPQDANCIGDG*VRVGLT
Trigger: GGTCAGCCCAACACGCACCAATCCATCCCCGATGCA...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp AAAGCCGGACACTTTTGGGATCCCACACAGCATCGAAAGGTCAAGGCCTCGAAGTGTGTCTCGAGAGCTTaGTTCTTGAGTGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: KAGHFWDPTQHRKVKASKCVSRA*FLSGSA
Trigger: GGCAGACCCACTCAAGAACAAAGCTCTCGAGACACA...CTTCGAGGCCTTGACCTTTCGATGCTGTGTGGGATCCCAAAAGTGTCCGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS-3UTR CAA 90 bp TGCCATCCATTCAGCGGGCACTTATGCCCACGACCAGCTGAGCCAGACCAGCATGACAATGCGAATCTGTaGATTTATTTACGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: CHPFSGHLCPRPAEPDQHDNANL*IYLRLG
Trigger: ACCGAGCCGTAAATAAATCAACAGATTCGCATTGTC...ATGCTGGTCTGGCTCAGCTGGTCGTGGGCATAAGTGCCCGCTGAATGGATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000621401.4
CDS-3UTR CAA 90 bp CTGAGCCAGACCAGCATTCCCATTTCACCACCCCTTACTCCTCAAGATGCAAATGACAATGCGAATCTGTaGATTTATTTACGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: LSQTSIPISPPLTPQDANDNANL*IYLRLG
Trigger: ACCGAGCCGTAAATAAATCAACAGATTCGCATTGTC...ATTTGCATCTTGAGGAGTAAGGGGTGGTGAAATGGGAATGCTGGTCTGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614491.1
ENST00000621401.4
CDS-3UTR CAA 90 bp GCTTCTTTTGACCTTTTTCAGAGTTTCAGAGTTATGAACCAAATCGCCTTCATGTGTGTCTCGAGAGCTTaGTTCTTGAGTGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: ASFDLFQSFRVMNQIAFMCVSRA*FLSGSA
Trigger: GGCAGACCCACTCAAGAACAAAGCTCTCGAGACACA...CATGAAGGCGATTTGGTTCATAACTCTGAAACTCTGAAAAAGGTCAAAAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000614491.1
ENST00000621401.4
ENST00000652477.1
CDS GCA 72 bp ACTCAGGGTGGTGCGCAGAGGACGTGGGGCCGGCCCTaGCTCCCGGAGCTCCTGGTCTACTGGGAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: TQGGAQRTWGRP*LPELLVYWECC
Trigger: GCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCACCCTGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613110.4
ENST00000614268.4
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS CCA 72 bp AACTCAGGGGTGGCGCACAGAGGATCCAACTCAGGGTaGTGCGCAGAGGACGTGGGGCCGGCCCTGCCTCCC +
Preference number: 6 (lower is better)
Translates to: NSGVAHRGSNSG*CAEDVGPALPP
Trigger: GGGAGGCAGGGCCGGCCCCACGTCCTCTGCGCACCACCCTGAGTTGGATCCTCTGTGCGCCACCCCTGAGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000613110.4
ENST00000614268.4
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS CCA 72 bp AGAGGACGTGGGGCCGGCCCTGCCTCCCGGAGCTCCTaGTCTACTGGGAGTGCTGCAACCGCCTTCCCGAGA +
Preference number: 6 (lower is better)
Translates to: RGRGAGPASRSS*STGSAATAFPR
Trigger: TCTCGGGAAGGCGGTTGCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS CCA 72 bp AGAGGACGTGGGGCCGGCCCTGCCTCCCGGAGCTCCTaGTCTACTGGGAGTGCTGCAACCGTGTTCAGCCCG +
Preference number: 6 (lower is better)
Translates to: RGRGAGPASRSS*STGSAATVFSP
Trigger: CGGGCTGAACACGGTTGCAGCACTCCCAGTAGACCAGGAGCTCCGGGAGGCAGGGCCGGCCCCACGTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621401.4
CDS GCA 72 bp CTGGGAGTCACCCGCGGCCGCTCGCCGGTAGGTGCCTaGCTGAGTCTAATCGTAGGCGTGTCTGTGTGTCCC +
Preference number: 6 (lower is better)
Translates to: LGVTRGRSPVGA*LSLIVGVSVCP
Trigger: GGGACACACAGACACGCCTACGATTAGACTCAGGCAGGCACCTACCGGCGAGCGGCCGCGGGTGACTCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522906.1
ENST00000613110.4
ENST00000614491.1
CDS CCA 72 bp GGTCAACAGCAGCTAGCCCTGGATCCAACTCAGGGGTaGCGCACAGAGGATCCAACTCAGGGTGGTGCGCAG +
Preference number: 6 (lower is better)
Translates to: GQQQLALDPTQG*RTEDPTQGGAQ
Trigger: CTGCGCACCACCCTGAGTTGGATCCTCTGTGCGCCACCCCTGAGTTGGATCCAGGGCTAGCTGCTGTTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000613110.4
ENST00000614268.4
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS TCA 72 bp ACACAGTCTCGAAGCAGCGGGGCACGCAGGACTTACTaGCCTTCATCCTGGTGGGGGTGTAGTAGGTGCGCG +
Preference number: 6 (lower is better)
Translates to: TQSRSSGARRTY*PSSWWGCSRCA
Trigger: CGCGCACCTACTACACCCCCACCAGGATGAAGGTCAGTAAGTCCTGCGTGCCCCGCTGCTTCGAGACTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000613110.4
ENST00000614268.4
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS CCA 72 bp GGTCGTACTGGCAGCAGGAGGTGGTGGACGCGTGCTTaGAGTAGCCATCATACACAGTCTCGAAGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: GRTGSRRWWTRA*SSHHTQSRSSG
Trigger: CCCGCTGCTTCGAGACTGTGTATGATGGCTACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGTACGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS CCA 72 bp CGGTGCCGTTGCAGAGGTCGTACTGGCAGCAGGAGGTaGTGGACGCGTGCTTGGAGTAGCCATCATACACAG +
Preference number: 6 (lower is better)
Translates to: RCRCRGRTGSRR*WTRAWSSHHTQ
Trigger: CTGTGTATGATGGCTACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGTACGACCTCTGCAACGGCACCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS CAA 90 bp GCAACCGCCTTCCCGAGAACAACAAATCCGTCTCTCACGACACATTaGCCCAGGCCAACCCCAGGATGCCAAAGGCCAGAGTCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: ATAFPRTTNPSLTTH*PRPTPGCQRPESGL
Trigger: CAGGCCTGACTCTGGCCTTTGGCATCCTGGGGTTGGCCTGGGCAAATGTGTCGTGAGAGACGGATTTGTTGTTCTCGGGAAGGCGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS CCA 72 bp TGCCGTTGCAGAGGTCGTACTGGCAGCAGGAGGTGGTaGACGCGTGCTTGGAGTAGCCATCATACACAGTCT +
Preference number: 6 (lower is better)
Translates to: CRCRGRTGSRRW*TRAWSSHHTQS
Trigger: AGACTGTGTATGATGGCTACTCCAAGCACGCGTCCACCACCTCCTGCTGCCAGTACGACCTCTGCAACGGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS CCA 72 bp GGTGTAGCAGTGTGTCTCGAGAGCTTTGTTCTTGAGTaGGTCTGCCTCGGGGGCTTTAGAGGAGACCCCAGA +
Preference number: 6 (lower is better)
Translates to: GVAVCLESFVLE*VCLGGFRGDPR
Trigger: TCTGGGGTCTCCTCTAAAGCCCCCGAGGCAGACCCACTCAAGAACAAAGCTCTCGAGACACACTGCTACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614491.1
ENST00000620006.4
ENST00000621401.4
ENST00000652477.1
CDS GCA 72 bp TCCCGAGAACAACAAATCCGTCTCTCACGACACATTTaGCCAGGCCAACCCCAGGATGCCAAAGGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: SREQQIRLSRHI*PGQPQDAKGQS
Trigger: ACTCTGGCCTTTGGCATCCTGGGGTTGGCCTGGGCAAATGTGTCGTGAGAGACGGATTTGTTGTTCTCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620006.4
CDS CAA 72 bp TTCCCGAGAACAACAAATCCGTCTCTCACGACACATTaGCCCAGGCCAACCCCAGGATGCCAAAGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: FPRTTNPSLTTH*PRPTPGCQRPE
Trigger: CTCTGGCCTTTGGCATCCTGGGGTTGGCCTGGGCAAATGTGTCGTGAGAGACGGATTTGTTGTTCTCGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620006.4