RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LYN (Homo sapiens)

Ensembl gene IDs: ENSG00000254087

Ensembl transcript IDs: ENST00000420292.1, ENST00000519728.6, ENST00000520050.1, ENST00000520220.6

Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCAGGTGAGCCCGGTGCCTTCGGGTGAGCAGACAGGGCAGCTGTaGGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATGTGCA +
Preference number: 1 (lower is better)
Translates to: VQVSPVPSGEQTGQL*VLTGSSCWKRERCA
Trigger: TGCACATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCTGCTCACCCGAAGGCACCGGGCTCACCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR GCA 90 bp TCGGGTGAGCAGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTaGTGGAAGAGAGAGAGATGTGCACGCCACTCCTATGGCATGTCT +
Preference number: 1 (lower is better)
Translates to: SGEQTGQLCVLTGSS*WKRERCARHSYGMS
Trigger: AGACATGCCATAGGAGTGGCGTGCACATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCTGCTCACCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 90 bp GGTGAGCAGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTaGAAGAGAGAGAGATGTGCACGCCACTCCTATGGCATGTCTAGC +
Preference number: 1 (lower is better)
Translates to: GEQTGQLCVLTGSSC*KRERCARHSYGMSS
Trigger: GCTAGACATGCCATAGGAGTGGCGTGCACATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCTGCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR GCA 90 bp AGGCTGAGGCAGGAGAAGAATCGCTCCAACCAGAGAGGGGGAGGTTaGAATGAGCTGAGATCGCACCACTGCAACTCTAGCCTGCGTGAC +
Preference number: 1 (lower is better)
Translates to: RLRQEKNRSNQRGGG*NELRSHHCNSSLRD
Trigger: GTCACGCAGGCTAGAGTTGCAGTGGTGCGATCTCAGCTCATTGCAACCTCCCCCTCTCTGGTTGGAGCGATTCTTCTCCTGCCTCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 90 bp TTCCTTCTAAACACAGAGCAGTTTCTGAGGCTCTTCTCCCTTTCCTaGGAGGTCCAGGTGAGCCCGGTGCCTTCGGGTGAGCAGACAGGG +
Preference number: 1 (lower is better)
Translates to: FLLNTEQFLRLFSLS*EVQVSPVPSGEQTG
Trigger: CCCTGTCTGCTCACCCGAAGGCACCGGGCTCACCTGGACCTCCCAGGAAAGGGAGAAGAGCCTCAGAAACTGCTCTGTGTTTAGAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 90 bp TCTGAGAGGTGTTCTTGGCTGAGGAAGCAGGAGATGTCCGACAACTaGCTGTGGAACCTGGCAGTGACATCAGAAGAGCTGGGGAGCGAG +
Preference number: 1 (lower is better)
Translates to: SERCSWLRKQEMSDN*LWNLAVTSEELGSE
Trigger: CTCGCTCCCCAGCTCTTCTGATGTCACTGCCAGGTTCCACAGCCAGTTGTCGGACATCTCCTGCTTCCTCAGCCAAGAACACCTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 90 bp CTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTaGACACCAGAGATGAGGCCCAAGCTGGTGAAGGGCCCACATGGA +
Preference number: 1 (lower is better)
Translates to: LCVLFIKGTCDFHTC*TPEMRPKLVKGPHG
Trigger: TCCATGTGGGCCCTTCACCAGCTTGGGCCTCATCTCTGGTGTCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR GCA 90 bp GGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTaGAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGC +
Preference number: 1 (lower is better)
Translates to: GLDSTRSQWLIRSTF*KGILWNLRRYAWRS
Trigger: GCTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 90 bp CTAAGAGGAAAGCTGGGCGGTTTGATCTCATCTGAGAGGTGTTCTTaGCTGAGGAAGCAGGAGATGTCCGACAACTGGCTGTGGAACCTG +
Preference number: 1 (lower is better)
Translates to: LRGKLGGLISSERCS*LRKQEMSDNWLWNL
Trigger: CAGGTTCCACAGCCAGTTGTCGGACATCTCCTGCTTCCTCAGCCAAGAACACCTCTCAGATGAGATCAAACCGCCCAGCTTTCCTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 90 bp AGCCCCAGGTGGCCCCTACTACTAAGGACACTGGTTTCTAGCCTGTaGGTCTCCTTTAGGTTCAGTGAGCTTCATGTTCACCAGGAAGGA +
Preference number: 1 (lower is better)
Translates to: SPRWPLLLRTLVSSL*VSFRFSELHVHQEG
Trigger: TCCTTCCTGGTGAACATGAAGCTCACTGAACCTAAAGGAGACTCACAGGCTAGAAACCAGTGTCCTTAGTAGTAGGGGCCACCTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 90 bp CGGCTGCACTCAGATGTTGTCAAGCAGAGCAAGATTACCAGCTGCTaGGGACAAGTCCAAGTTGCAACTGAGTGGAGAATCCATCTAAGA +
Preference number: 1 (lower is better)
Translates to: RLHSDVVKQSKITSC*GQVQVATEWRIHLR
Trigger: TCTTAGATGGATTCTCCACTCAGTTGCAACTTGGACTTGTCCTCAGCAGCTGGTAATCTTGCTCTGCTTGACAACATCTGAGTGCAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 90 bp AGAAAGCAGACTCCACAAGCTGACGTGGAGATGAGTTTATACTTATaGTGCTTTCAGTGCCCTCGATCTATCCCTGGTGTAGGCAACAAA +
Preference number: 1 (lower is better)
Translates to: RKQTPQADVEMSLYL*CFQCPRSIPGVGNK
Trigger: TTTGTTGCCTACACCAGGGATAGATCGAGGGCACTGAAAGCATCATAAGTATAAACTCATCTCCACGTCAGCTTGTGGAGTCTGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 90 bp AAAAAGAGAGAGCGAGAAAGCAGACTCCACAAGCTGACGTGGAGATaGGTTTATACTTATGATGCTTTCAGTGCCCTCGATCTATCCCTG +
Preference number: 1 (lower is better)
Translates to: KKRERESRLHKLTWR*VYTYDAFSALDLSL
Trigger: CAGGGATAGATCGAGGGCACTGAAAGCATCATAAGTATAAACTCATCTCCACGTCAGCTTGTGGAGTCTGCTTTCTCGCTCTCTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 90 bp TCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTTaGACCTCCTGCCACCGTGGCTTATTAGAGCCTTGTAGTCACTTA +
Preference number: 1 (lower is better)
Translates to: SIQSLQEKNLVNRTA*TSCHRGLLEPCSHL
Trigger: TAAGTGACTACAAGGCTCTAATAAGCCACGGTGGCAGGAGGTTCAAGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 90 bp AGGAAAAAGAAGGCTGGGCTTTGTAATATGGGTCAAACCAAATGGTaGCTCTCAAGACTGAGCATACATTATATTCACCAGGGAAGGGTT +
Preference number: 1 (lower is better)
Translates to: RKKKAGLCNMGQTKW*LSRLSIHYIHQGRV
Trigger: AACCCTTCCCTGGTGAATATAATGTATGCTCAGTCTTGAGAGTCACCATTTGGTTTGACCCATATTACAAAGCCCAGCCTTCTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 90 bp TGTGAAATAGTGATAGCATTGTCCAGATCTTCCAGGGTCGTTGTGTaGGTTAGAGATAATTTTTATCATTTGCCAAAGCACAAGAGGGCC +
Preference number: 1 (lower is better)
Translates to: CEIVIALSRSSRVVV*VRDNFYHLPKHKRA
Trigger: GGCCCTCTTGTGCTTTGGCAAATGATAAAAATTATCTCTAACTCACACAACGACCCTGGAAGATCTGGACAATGCTATCACTATTTCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR GCA 90 bp AAACAATATGAAGCGAAGCCAATCTATTCCTTCTGTGGCTTTAAATaGTCCCGATCTCTCAGCTGTGAAATAGTGATAGCATTGTCCAGA +
Preference number: 1 (lower is better)
Translates to: KQYEAKPIYSFCGFK*SRSLSCEIVIALSR
Trigger: TCTGGACAATGCTATCACTATTTCACAGCTGAGAGATCGGGAGCATTTAAAGCCACAGAAGGAATAGATTGGCTTCGCTTCATATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 90 bp AGTTCTGCAATTATTGGGGATTCATTGCAATGGTCTCTGAAACTTTaGGTCCTATGTCCATTTGTAAACATAGAGCTAGTTGGGTGCATT +
Preference number: 1 (lower is better)
Translates to: SSAIIGDSLQWSLKL*VLCPFVNIELVGCI
Trigger: AATGCACCCAACTAGCTCTATGTTTACAAATGGACATAGGACTCAAAGTTTCAGAGACCATTGCAATGAATCCCCAATAATTGCAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATTCCAGGCACGGCAGATaGTCCCCGCACATGAAATCA +
Preference number: 2 (lower is better)
Translates to: RQGSCACSRAPPAGRERDSRHGR*SPHMKS
Trigger: TGATTTCATGTGCGGGGATCATCTGCCGTGCCTGGA...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCCCTGGGAGGTCCAGGTaGGCCCGGTGCCTTCGGGTG +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSPGRSR*ARCLRV
Trigger: CACCCGAAGGCACCGGGCTCACCTGGACCTCCCAGG...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCCTCTTCTCCCTTTCCTaGGAGGTCCAGGTGAGCCCG +
Preference number: 2 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGLFSLS*EVQVSP
Trigger: CGGGCTCACCTGGACCTCCCAGGAAAGGGAGAAGAG...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCCTTTTCCTCTCTAAATaGGGCAGCCACCCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGLFLSK*GSHPCQ
Trigger: TTGGCAGGGGTGGCTGCCTCATTTAGAGAGGAAAAG...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATGATGATCCCCGCACATaGAATCATAAGTGCAACCAG +
Preference number: 2 (lower is better)
Translates to: RQGSCACSRAPPAGRERDDDPRT*NHKCNQ
Trigger: CTGGTTGCACTTATGATTTCATGTGCGGGGATCATC...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTCCCGGTGCCTTCGGGTaGGCAGACAGGGCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIPGAFG*ADRAAV
Trigger: CACAGCTGCCCTGTCTGCTCACCCGAAGGCACCGGG...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCGTGAACAGAACCGCTTaGACCTCCTGCCACCGTGGC +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPVNRTA*TSCHRG
Trigger: GCCACGGTGGCAGGAGGTTCAAGCGGTTCTGTTCAC...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CAA 90 bp AGGGCTGCTGGCTTCTGTGGCAGTGAATTTCCCCTAGAAGGGGGCTaGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGC +
Preference number: 2 (lower is better)
Translates to: RAAGFCGSEFPLEGG*DSTRSQWLIRSTFC
Trigger: GCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTTCTAGGGGAAATTCACTGCCACAGAAGCCAGCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCCTCAGGAGGTATGCCTaGAGAAGCCACGGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSLRRYA*RSHGSP
Trigger: GGGGCTTCCGTGGCTTCTCCAGGCATACCTCCTGAG...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCCTGGTTTCTAGCCTGTaGGTCTCCTTTAGGTTCAGT +
Preference number: 2 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGLVSSL*VSFRFS
Trigger: ACTGAACCTAAAGGAGACTCACAGGCTAGAAACCAG...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCCAGAGAGGGGGAGGTTaGAATGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPQRGGG*NELRSH
Trigger: GTGCGATCTCAGCTCATTGCAACCTCCCCCTCTCTG...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCCTATATTGCTCAGGCTaGTGTCTAACTCCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGLYCSG*CLTPEL
Trigger: GAGCTCAGGAGTTAGACACCAGCCTGAGCAATATAG...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGACACGGAAGCCCCAGGTaGCCCCTACTACTAAGGACA +
Preference number: 2 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGHGSPR*PLLLRT
Trigger: TGTCCTTAGTAGTAGGGGCCACCTGGGGCTTCCGTG...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGCACGGAAGCCCCAGGTaGCCCCTACTACTAAGGACA +
Preference number: 2 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKHGSPR*PLLLRT
Trigger: TGTCCTTAGTAGTAGGGGCCACCTGGGGCTTCCGTG...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTGAACAGAACCGCTTaGACCTCCTGCCACCGTGGC +
Preference number: 2 (lower is better)
Translates to: IRRAGERALGPAFNLFEGVNRTA*TSCHRG
Trigger: GCCACGGTGGCAGGAGGTTCAAGCGGTTCTGTTCAC...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCACATCAAGGGAACGTGTaGCTTCCACACATGCTGGAC +
Preference number: 2 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAHQGNV*LPHMLD
Trigger: GTCCAGCATGTGTGGAAGTCACACGTTCCCTTGATG...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCATTCAGCCCCTCATTATaGCTGTCTGTCACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAFSPSL*LSVTGR
Trigger: CCTCCCTGTGACAGACAGGCATAATGAGGGGCTGAA...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCCAGAGAGGGGGAGGTTaGAATGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSQRGGG*NELRSH
Trigger: GTGCGATCTCAGCTCATTGCAACCTCCCCCTCTCTG...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGACTTCCACACATGCTaGACACCAGAGATGAGGCCC +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSDFHTC*TPEMRP
Trigger: GGGCCTCATCTCTGGTGTCCAGCATGTGTGGAAGTC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGAGAAGAGAGAGAGATGTaGACGCCACTCCTATGGCAT +
Preference number: 2 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGEEREM*TPLLWH
Trigger: ATGCCATAGGAGTGGCGTGCACATCTCTCTCTCTTC...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCAAGATTACCAGCTGCTaGGGACAAGTCCAAGTTGCA +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPKITSC*GQVQVA
Trigger: TGCAACTTGGACTTGTCCTCAGCAGCTGGTAATCTT...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCTGGTCTCTGAAACTTTaGGTCCTATGTCCATTTGTA +
Preference number: 2 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGWSLKL*VLCPFV
Trigger: TACAAATGGACATAGGACTCAAAGTTTCAGAGACCA...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGACACAGAGCAGTTTCTaGGGCTCTTCTCCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKTQSSF*GSSPFP
Trigger: AGGAAAGGGAGAAGAGCCTCAGAAACTGCTCTGTGT...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCAGTCCAAGTTGCAACTaGGTGGAGAATCCATCTAAG +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPSPSCN*VENPSK
Trigger: CTTAGATGGATTCTCCACTCAGTTGCAACTTGGACT...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCGCCACTGTGTCTAGCTaGCTGGAGAAGCTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPATVSS*LEKLLK
Trigger: TTTTAAAAGCTTCTCCAGTCAGCTAGACACAGTGGC...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGCAGACTCCACAAGCTaGCGTGGAGATGAGTTTATA +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSADSTS*RGDEFI
Trigger: TATAAACTCATCTCCACGTCAGCTTGTGGAGTCTGC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCTTCTTCTCAAACGGCTaGACTCAGATGTTGTCAAGC +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPFFSNG*TQMLSS
Trigger: GCTTGACAACATCTGAGTGCAGCCGTTTGAGAAGAA...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCCAGACAGGGCAGCTGTaGGTGCTCACGGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRQTGQL*VLTGSS
Trigger: GGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCTG...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTTTCAGCCCCTCATTATaGCTGTCTGTCACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: IRRAGERALGPAFNLFEGFSPSL*LSVTGR
Trigger: CCTCCCTGTGACAGACAGGCATAATGAGGGGCTGAA...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCAAACATAGAGCTAGTTaGGTGCATTTTTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGKHRAS*VHFWRE
Trigger: TTCTCTCCAAAAATGCACCCAACTAGCTCTATGTTT...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAAGTCCAAGTTGCAACTaGGTGGAGAATCCATCTAAG +
Preference number: 2 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGSPSCN*VENPSK
Trigger: CTTAGATGGATTCTCCACTCAGTTGCAACTTGGACT...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGGCCACTGTGTCTAGCTaGCTGGAGAAGCTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKATVSS*LEKLLK
Trigger: TTTTAAAAGCTTCTCCAGTCAGCTAGACACAGTGGC...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCGGTCAAACCAAATGGTaGCTCTCAAGACTGAGCATA +
Preference number: 2 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCGQTKW*LSRLSI
Trigger: TATGCTCAGTCTTGAGAGTCACCATTTGGTTTGACC...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTGAAGAGAGAGAGATGTaGACGCCACTCCTATGGCAT +
Preference number: 2 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIEEREM*TPLLWH
Trigger: ATGCCATAGGAGTGGCGTGCACATCTCTCTCTCTTC...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCATCAGAAGTACTTTCTaGAAGGGGATTCTGTGGAAC +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPIRSTF*KGILWN
Trigger: GTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGAT...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGTTATTATCCTTTTATaGACCCTTGGGACAGCCAGG +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSVIILL*TLGTAR
Trigger: CCTGGCTGTCCCAAGGGTGCATAAAAGGATAATAAC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTAAGATTACCAGCTGCTaGGGACAAGTCCAAGTTGCA +
Preference number: 2 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIKITSC*GQVQVA
Trigger: TGCAACTTGGACTTGTCCTCAGCAGCTGGTAATCTT...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCTGGTCTCTGAAACTTTaGGTCCTATGTCCATTTGTA +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPWSLKL*VLCPFV
Trigger: TACAAATGGACATAGGACTCAAAGTTTCAGAGACCA...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGACATTGCAATGGTCTCTaGAACTTTGAGTCCTATGTC +
Preference number: 2 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGHCNGL*NFESYV
Trigger: GACATAGGACTCAAAGTTTCAGAGACCATTGCAATG...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGCTTGGTTCTCCAATCTaGAATGTTCAAAGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKLGSPI*NVQRKE
Trigger: CTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAG...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTCAAAAACCTTACCACTaGATCAAGGGACCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: IRRAGERALGPAFNLFEGQKPYH*IKGPAV
Trigger: CACAGCTGGTCCCTTGATTCAGTGGTAAGGTTTTTG...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGGCTTTTAAAATAGACTaGCATACATCTCCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKAFKID*HTSPAA
Trigger: TGCAGCGGGAGATGTATGTCAGTCTATTTTAAAAGC...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAGCTTTTAAAATAGACTaGCATACATCTCCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGAFKID*HTSPAA
Trigger: TGCAGCGGGAGATGTATGTCAGTCTATTTTAAAAGC...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCAGAGACTTGCTATATTaGTCAGGCTGGTGTCTAACT +
Preference number: 2 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCRDLLY*SGWCLT
Trigger: AGTTAGACACCAGCCTGAGCAATATAGCAAGTCTCT...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGAGAGACTTGCTATATTaGTCAGGCTGGTGTCTAACT +
Preference number: 2 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKRDLLY*SGWCLT
Trigger: AGTTAGACACCAGCCTGAGCAATATAGCAAGTCTCT...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCGAAGGAGGTAGAACTTaGGCAAGTTTAAAGCATGTA +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPEGGRT*ASLKHV
Trigger: TACATGCTTTAAACTTGCCCAAGTTCTACCTCCTTC...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCCTGGGCTTTGTAATATaGGTCAAACCAAATGGTGAC +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSLGFVI*VKPNGD
Trigger: GTCACCATTTGGTTTGACCCATATTACAAAGCCCAG...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCACATTTTTAAGCTGCTaGCTTCACCTGCAAAATCTA +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPTFLSC*LHLQNL
Trigger: TAGATTTTGCAGGTGAAGTCAGCAGCTTAAAAATGT...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCGTGAAACACATCATGTaGTACAGAAGTTTCCATTCA +
Preference number: 2 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPVKHIM*YRSFHS
Trigger: TGAATGGAAACTTCTGTATCACATGATGTGTTTCAC...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCAAGCTGACGTGGAGATaGGTTTATACTTATGATGCT +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSKLTWR*VYTYDA
Trigger: AGCATCATAAGTATAAACTCATCTCCACGTCAGCTT...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCTTCTTCTCAAACGGCTaGACTCAGATGTTGTCAAGC +
Preference number: 2 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCFFSNG*TQMLSS
Trigger: GCTTGACAACATCTGAGTGCAGCCGTTTGAGAAGAA...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTTATTATCCTTTTATaGACCCTTGGGACAGCCAGG +
Preference number: 2 (lower is better)
Translates to: IRRAGERALGPAFNLFEGVIILL*TLGTAR
Trigger: CCTGGCTGTCCCAAGGGTGCATAAAAGGATAATAAC...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGACAAGTTGCAACTGAGTaGAGAATCCATCTAAGAGTA +
Preference number: 2 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGQVATE*RIHLRV
Trigger: TACTCTTAGATGGATTCTCCACTCAGTTGCAACTTG...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCCAAGTTGCAACTGAGTaGAGAATCCATCTAAGAGTA +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSQVATE*RIHLRV
Trigger: TACTCTTAGATGGATTCTCCACTCAGTTGCAACTTG...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTAGTACACGTTCCCAGTaGCTCATCAGAAGTACTTTC +
Preference number: 2 (lower is better)
Translates to: IRRAGERALGPAFNLFEGSTRSQ*LIRSTF
Trigger: GAAAGTACTTCTGATGAGCCACTGGGAACGTGTACT...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTCCAGGCACGGCAGATaGTCCCCGCACATGAAATCA +
Preference number: 2 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRSRHGR*SPHMKS
Trigger: TGATTTCATGTGCGGGGATCATCTGCCGTGCCTGGA...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTCATTGCAATGGTCTCTaGAACTTTGAGTCCTATGTC +
Preference number: 2 (lower is better)
Translates to: IRRAGERALGPAFNLFEGHCNGL*NFESYV
Trigger: GACATAGGACTCAAAGTTTCAGAGACCATTGCAATG...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCACACAACAGCATAAGTaGAACACATCATGTGATACA +
Preference number: 2 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCTQQHK*NTSCDT
Trigger: TGTATCACATGATGTGTTTCACTTATGCTGTTGTGT...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR GCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTCTGGATACCCGAAAATaGTACAAACACCTATTCAGC +
Preference number: 2 (lower is better)
Translates to: IRRAGERALGPAFNLFEGLDTRK*YKHLFS
Trigger: GCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAG...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCCTCCATGTAACATATTaGGTAATACTTGTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: AGERALGPAFNLFEGVRSLHVTY*VILVVL
Trigger: CAGAACCACAAGTATTACCCAATATGTTACATGGAG...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCCTTTTCCTCTCTAAATaGGGCAGCCACCCCTGCCAA +
Preference number: 2 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRLFLSK*GSHPCQ
Trigger: TTGGCAGGGGTGGCTGCCTCATTTAGAGAGGAAAAG...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTGATGATCCCCGCACATaGAATCATAAGTGCAACCAG +
Preference number: 2 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTDDPRT*NHKCNQ
Trigger: CTGGTTGCACTTATGATTTCATGTGCGGGGATCATC...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTGAAGGAGGTAGAACTTaGGCAAGTTTAAAGCATGTA +
Preference number: 2 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIEGGRT*ASLKHV
Trigger: TACATGCTTTAAACTTGCCCAAGTTCTACCTCCTTC...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCAGGCAATCAACTCCTTaGTTCTCCAATCTGAAATGT +
Preference number: 2 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCRQSTP*FSNLKC
Trigger: ACATTTCAGATTGGAGAACCAAGGAGTTGATTGCCT...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCACACAGAGCAGTTTCTaGGGCTCTTCTCCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRTQSSF*GSSPFP
Trigger: AGGAAAGGGAGAAGAGCCTCAGAAACTGCTCTGTGT...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCGTGAAACACATCATGTaGTACAGAAGTTTCCATTCA +
Preference number: 2 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCVKHIM*YRSFHS
Trigger: TGAATGGAAACTTCTGTATCACATGATGTGTTTCAC...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCAAACATAGAGCTAGTTaGGTGCATTTTTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCKHRAS*VHFWRE
Trigger: TTCTCTCCAAAAATGCACCCAACTAGCTCTATGTTT...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCATAAGTGCAACCAGTaGTGGTTACTTTTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTHKCNQ*WLLFLS
Trigger: AGAGAGGAAAAGTAACCATCACTGGTTGCACTTATG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CAA 90 bp CGTGGCTTATTAGAGCCTTGTAGTCACTTATGTTCCTTCATATCCTaGGGTATAAATAGTCTCATACACATGCTACACAATTTAGAAAAG +
Preference number: 2 (lower is better)
Translates to: RGLLEPCSHLCSFIS*GINSLIHMLHNLEK
Trigger: CTTTTCTAAATTGTGTAGCATGTGTATGAGACTATTTATACCCAAGGATATGAAGGAACATAAGTGACTACAAGGCTCTAATAAGCCACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR GCA 72 bp AGCCCGGTGCCTTCGGGTGAGCAGACAGGGCAGCTGTaGGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: SPVPSGEQTGQL*VLTGSSCWKRE
Trigger: CTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCTGCTCACCCGAAGGCACCGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR GCA 72 bp CAGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTaGTGGAAGAGAGAGAGATGTGCACGCCACTCCTAT +
Preference number: 3 (lower is better)
Translates to: QTGQLCVLTGSS*WKRERCARHSY
Trigger: ATAGGAGTGGCGTGCACATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 72 bp AACACAGAGCAGTTTCTGAGGCTCTTCTCCCTTTCCTaGGAGGTCCAGGTGAGCCCGGTGCCTTCGGGTGAG +
Preference number: 3 (lower is better)
Translates to: NTEQFLRLFSLS*EVQVSPVPSGE
Trigger: CTCACCCGAAGGCACCGGGCTCACCTGGACCTCCCAGGAAAGGGAGAAGAGCCTCAGAAACTGCTCTGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 72 bp TGGCTGAGGAAGCAGGAGATGTCCGACAACTGGCTGTaGAACCTGGCAGTGACATCAGAAGAGCTGGGGAGC +
Preference number: 3 (lower is better)
Translates to: WLRKQEMSDNWL*NLAVTSEELGS
Trigger: GCTCCCCAGCTCTTCTGATGTCACTGCCAGGTTCCACAGCCAGTTGTCGGACATCTCCTGCTTCCTCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR GCA 72 bp CAGGAGAAGAATCGCTCCAACCAGAGAGGGGGAGGTTaGAATGAGCTGAGATCGCACCACTGCAACTCTAGC +
Preference number: 3 (lower is better)
Translates to: QEKNRSNQRGGG*NELRSHHCNSS
Trigger: GCTAGAGTTGCAGTGGTGCGATCTCAGCTCATTGCAACCTCCCCCTCTCTGGTTGGAGCGATTCTTCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 72 bp CTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTaGACACCAGAGATGAGGCCCAAGCTGGTGAAGGGC +
Preference number: 3 (lower is better)
Translates to: LFIKGTCDFHTC*TPEMRPKLVKG
Trigger: GCCCTTCACCAGCTTGGGCCTCATCTCTGGTGTCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 72 bp TGTTCTTGGCTGAGGAAGCAGGAGATGTCCGACAACTaGCTGTGGAACCTGGCAGTGACATCAGAAGAGCTG +
Preference number: 3 (lower is better)
Translates to: CSWLRKQEMSDN*LWNLAVTSEEL
Trigger: CAGCTCTTCTGATGTCACTGCCAGGTTCCACAGCCAGTTGTCGGACATCTCCTGCTTCCTCAGCCAAGAACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 72 bp AAGCTGGGCGGTTTGATCTCATCTGAGAGGTGTTCTTaGCTGAGGAAGCAGGAGATGTCCGACAACTGGCTG +
Preference number: 3 (lower is better)
Translates to: KLGGLISSERCS*LRKQEMSDNWL
Trigger: CAGCCAGTTGTCGGACATCTCCTGCTTCCTCAGCCAAGAACACCTCTCAGATGAGATCAAACCGCCCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGAGTGAACAGAACCGCTaGAACCTCCTGCCACCGTGG +
Preference number: 3 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKSEQNR*NLLPPW
Trigger: CCACGGTGGCAGGAGGTTCAAGCGGTTCTGTTCACT...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 72 bp AAGGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTaGCTTCCACACATGCTGGACACCAGAGATGAGGCC +
Preference number: 3 (lower is better)
Translates to: KETVCAVHQGNV*LPHMLDTRDEA
Trigger: GGCCTCATCTCTGGTGTCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAGAGGACAAGTCCAAGTaGCAACTGAGTGGAGAATCC +
Preference number: 3 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAEDKSK*QLSGES
Trigger: GGATTCTCCACTCAGTTGCAACTTGGACTTGTCCTC...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR GCA 72 bp AGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTaGAAGGGGATTCTGTGGAACCTCAGGAGGTATGCC +
Preference number: 3 (lower is better)
Translates to: STRSQWLIRSTF*KGILWNLRRYA
Trigger: GGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAGGCTGCACTCAGATGTaGTCAAGCAGAGCAAGATTA +
Preference number: 3 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGGCTQM*SSRARL
Trigger: TAATCTTGCTCTGCTTGACAACATCTGAGTGCAGCC...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 72 bp TGGCCCCTACTACTAAGGACACTGGTTTCTAGCCTGTaGGTCTCCTTTAGGTTCAGTGAGCTTCATGTTCAC +
Preference number: 3 (lower is better)
Translates to: WPLLLRTLVSSL*VSFRFSELHVH
Trigger: GTGAACATGAAGCTCACTGAACCTAAAGGAGACTCACAGGCTAGAAACCAGTGTCCTTAGTAGTAGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR GCA 72 bp CGAAAATGCTACAAACACCTATTCAGCCCCTCATTATaGCTGTCTGTCACAGGGAGGCTGGAAACCTATAGC +
Preference number: 3 (lower is better)
Translates to: RKCYKHLFSPSL*LSVTGRLETYS
Trigger: GCTATAGGTTTCCAGCCTCCCTGTGACAGACAGGCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGCAGGCAATCAACTCCTaGGTTCTCCAATCTGAAATG +
Preference number: 3 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKQAINS*VLQSEM
Trigger: CATTTCAGATTGGAGAACCAAGGAGTTGATTGCCTG...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGACAGGCAATCAACTCCTaGGTTCTCCAATCTGAAATG +
Preference number: 3 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGQAINS*VLQSEM
Trigger: CATTTCAGATTGGAGAACCAAGGAGTTGATTGCCTG...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGGCTGCACTCAGATGTaGTCAAGCAGAGCAAGATTA +
Preference number: 3 (lower is better)
Translates to: IRRAGERALGPAFNLFEGGCTQM*SSRARL
Trigger: TAATCTTGCTCTGCTTGACAACATCTGAGTGCAGCC...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 72 bp TCAGATGTTGTCAAGCAGAGCAAGATTACCAGCTGCTaGGGACAAGTCCAAGTTGCAACTGAGTGGAGAATC +
Preference number: 3 (lower is better)
Translates to: SDVVKQSKITSC*GQVQVATEWRI
Trigger: GATTCTCCACTCAGTTGCAACTTGGACTTGTCCTCAGCAGCTGGTAATCTTGCTCTGCTTGACAACATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 72 bp GAGCGAGAAAGCAGACTCCACAAGCTGACGTGGAGATaGGTTTATACTTATGATGCTTTCAGTGCCCTCGAT +
Preference number: 3 (lower is better)
Translates to: ERESRLHKLTWR*VYTYDAFSALD
Trigger: ATCGAGGGCACTGAAAGCATCATAAGTATAAACTCATCTCCACGTCAGCTTGTGGAGTCTGCTTTCTCGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 72 bp CTGAGGTGTGATGACATGAGCCATTTTGCACACCACTaGATACCCGAAAATGCTACAAACACCTATTCAGCC +
Preference number: 3 (lower is better)
Translates to: LRCDDMSHFAHH*IPENATNTYSA
Trigger: GGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAAAATGGCTCATGTCATCACACCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCTTAGTTCTGCAATTATaGGGGATTCATTGCAATGGT +
Preference number: 3 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPLVLQL*GIHCNG
Trigger: ACCATTGCAATGAATCCCCAATAATTGCAGAACTAA...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCATGCAAATAAAAAGCTaGAGATGTTATTGGACGAGG +
Preference number: 3 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPMQIKS*RCYWTR
Trigger: CCTCGTCCAATAACATCTCAAGCTTTTTATTTGCAT...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 72 bp AGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTTaGACCTCCTGCCACCGTGGCTTATTAGAGCCTTGT +
Preference number: 3 (lower is better)
Translates to: SLQEKNLVNRTA*TSCHRGLLEPC
Trigger: ACAAGGCTCTAATAAGCCACGGTGGCAGGAGGTTCAAGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 72 bp ACTCCACAAGCTGACGTGGAGATGAGTTTATACTTATaGTGCTTTCAGTGCCCTCGATCTATCCCTGGTGTA +
Preference number: 3 (lower is better)
Translates to: TPQADVEMSLYL*CFQCPRSIPGV
Trigger: TACACCAGGGATAGATCGAGGGCACTGAAAGCATCATAAGTATAAACTCATCTCCACGTCAGCTTGTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTGAGGACAAGTCCAAGTaGCAACTGAGTGGAGAATCC +
Preference number: 3 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTEDKSK*QLSGES
Trigger: GGATTCTCCACTCAGTTGCAACTTGGACTTGTCCTC...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGATTATTGGGGATTCATaGCAATGGTCTCTGAAACTT +
Preference number: 3 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKIIGDS*QWSLKL
Trigger: AAGTTTCAGAGACCATTGCAATGAATCCCCAATAAT...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGTCTCCATGTAACATATaGGGTAATACTTGTGGTTCT +
Preference number: 3 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKSPCNI*GNTCGS
Trigger: AGAACCACAAGTATTACCCAATATGTTACATGGAGA...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 72 bp AGGTGTTCAGGCAATCAACTCCTTGGTTCTCCAATCTaGAATGTTCAAAGGAAGGAGGTAGAACTTGGGCAA +
Preference number: 3 (lower is better)
Translates to: RCSGNQLLGSPI*NVQRKEVELGQ
Trigger: TTGCCCAAGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTGCCTGAACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 72 bp GATTACCAGCTGCTGAGGACAAGTCCAAGTTGCAACTaGGTGGAGAATCCATCTAAGAGTACAGAATACTTT +
Preference number: 3 (lower is better)
Translates to: DYQLLRTSPSCN*VENPSKSTEYF
Trigger: AAAGTATTCTGTACTCTTAGATGGATTCTCCACTCAGTTGCAACTTGGACTTGTCCTCAGCAGCTGGTAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTTTAGTTCTGCAATTATaGGGGATTCATTGCAATGGT +
Preference number: 3 (lower is better)
Translates to: IRRAGERALGPAFNLFEGLVLQL*GIHCNG
Trigger: ACCATTGCAATGAATCCCCAATAATTGCAGAACTAA...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR TCA 72 bp AAGGCTGGGCTTTGTAATATGGGTCAAACCAAATGGTaGCTCTCAAGACTGAGCATACATTATATTCACCAG +
Preference number: 3 (lower is better)
Translates to: KAGLCNMGQTKW*LSRLSIHYIHQ
Trigger: CTGGTGAATATAATGTATGCTCAGTCTTGAGAGTCACCATTTGGTTTGACCCATATTACAAAGCCCAGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CCA 72 bp TCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTTaGGCAAGTTTAAAGCATGTAGCTCTGTTGAATCAC +
Preference number: 3 (lower is better)
Translates to: SNLKCSKEGGRT*ASLKHVALLNH
Trigger: GTGATTCAACAGAGCTACATGCTTTAAACTTGCCCAAGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR-3UTR CAA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTATGCAAATAAAAAGCTaGAGATGTTATTGGACGAGG +
Preference number: 3 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTMQIKS*RCYWTR
Trigger: CCTCGTCCAATAACATCTCAAGCTTTTTATTTGCAT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCCCCGGTGCCTTCGGGTaGGCAGACAGGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGPGAFG*ADRAAV
Trigger: CACAGCTGCCCTGTCTGCTCACCCGAAGGCACCGGG...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCGTATGGGGAGGCTGCTaGCCGGGAACGCTGGACGCG +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGVWGGC*PGTLDA
Trigger: CGCGTCCAGCGTTCCCGGCCAGCAGCCTCCCCATAC...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATGTGAACAGAACCGCTTaGACCTCCTGCCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDVNRTA*TSCHRG
Trigger: GCCACGGTGGCAGGAGGTTCAAGCGGTTCTGTTCAC...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCACCGCTTGCCGCGGGCTaGAGGCTGCAGCGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAPLAAG*RLQRVW
Trigger: CCAGACGCGCTGCAGCCTCCAGCCCGCGGCAAGCGG...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCATTTCCCGCTCGCGGTaGAAGTTTCGGGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGISRSR*KFRGGG
Trigger: TCCGCCGCCCCGAAACTTTCACCGCGAGCGGGAAAT...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCCCTGGGAGGTCCAGGTaGGCCCGGTGCCTTCGGGTG +
Preference number: 4 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPPGRSR*ARCLRV
Trigger: CACCCGAAGGCACCGGGCTCACCTGGACCTCCCAGG...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATGCCTTTTCACCAACTTaGTGGACTCCCGGGGGATCT +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDAFSPT*WTPGGS
Trigger: AGATCCCCCGGGAGTCCATCAAGTTGGTGAAAAGGC...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCACCCGGTGCCTTCGGGTaGGCAGACAGGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAPGAFG*ADRAAV
Trigger: CACAGCTGCCCTGTCTGCTCACCCGAAGGCACCGGG...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGACCTGGGAGGTCCAGGTaGGCCCGGTGCCTTCGGGTG +
Preference number: 4 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGPGRSR*ARCLRV
Trigger: CACCCGAAGGCACCGGGCTCACCTGGACCTCCCAGG...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATAGAGGTGTTCTTGGCTaGGGAAGCAGGAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDRGVLG*GSRRCP
Trigger: CGGACATCTCCTGCTTCCTCAGCCAAGAACACCTCT...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCATGCGTATGGGGAGGCTaGTGGCCGGGAACGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSACVWGG*WPGTLD
Trigger: GTCCAGCGTTCCCGGCCAGCAGCCTCCCCATACGCA...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTCCGCTTGCCGCGGGCTaGAGGCTGCAGCGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIPLAAG*RLQRVW
Trigger: CCAGACGCGCTGCAGCCTCCAGCCCGCGGCAAGCGG...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGAAGCAGGACCTGCGTATaGGGAGGCTGCTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGSRTCV*GGCWPG
Trigger: TCCCGGCCAGCAGCCTCCCCATACGCAGGTCCTGCT...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCGACTTGAGTTCAGAGTaGGGGGCGCGACGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCDLSSE*GARRGG
Trigger: GCCGCCCCGTCGCGCCCCCCACTCTGAACTCAAGTC...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCCACGGAAGCCCCAGGTaGCCCCTACTACTAAGGACA +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGHGSPR*PLLLRT
Trigger: TGTCCTTAGTAGTAGGGGCCACCTGGGGCTTCCGTG...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCTGGGCTCCTCCCTGGTaGCCACAGCGTAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPWAPPW*PQRRAS
Trigger: TGAGGCTCTACGCTGTGGTCACCAGGGAGGAGCCCA...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCAGTCGTCCGGGTGGATaGCATCATAGGGGTACAAGG +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGSRPGG*HHRGTR
Trigger: CCTTGTACCCCTATGATGGCATCCACCCGGACGACT...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCTGCGTATGGGGAGGCTaGTGGCCGGGAACGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSCVWGG*WPGTLD
Trigger: GTCCAGCGTTCCCGGCCAGCAGCCTCCCCATACGCA...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCAGACAGGGCAGCTGTaGGTGCTCACGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCQTGQL*VLTGSS
Trigger: GGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCTG...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCGACTTCCACACATGCTaGACACCAGAGATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGDFHTC*TPEMRP
Trigger: GGGCCTCATCTCTGGTGTCCAGCATGTGTGGAAGTC...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGGCGGAGCTCCACGGTaGCTTGAGTTCAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSGGAPR*LEFRVG
Trigger: CCCCACTCTGAACTCAAGTCACCGTGGAGCTCCGCC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGATTTCCCGCTCGCGGTaGAAGTTTCGGGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKISRSR*KFRGGG
Trigger: TCCGCCGCCCCGAAACTTTCACCGCGAGCGGGAAAT...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATCTGAGGTTGCAGAATTaGGTCCTTTTAGCAGCTACC +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDLRLQN*VLLAAT
Trigger: GGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAG...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATAGCACAAGAGGGCCCTaGGTAAAGAATGTGTGTATG +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDSTRGP*VKNVCM
Trigger: CATACACACATTCTTTACTCAGGGCCCTCTTGTGCT...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGACTTGAGTTCAGAGTaGGGGGCGCGACGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGDLSSE*GARRGG
Trigger: GCCGCCCCGTCGCGCCCCCCACTCTGAACTCAAGTC...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCGCCACCCCTGCCAAATaGACGGGTCTCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCATPAK*TGLPVL
Trigger: GAGCACAGGGAGACCCGTCCATTTGGCAGGGGTGGC...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCTCCGACAACTGGCTGTaGAACCTGGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGSDNWL*NLAVTS
Trigger: TGATGTCACTGCCAGGTTCCACAGCCAGTTGTCGGA...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCCAGACAGGGCAGCTGTaGGTGCTCACGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCQTGQL*VLTGSS
Trigger: GGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCTG...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATACATACATCTCCCGCTaGACAACAGCTAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDTYISR*TTAKSE
Trigger: TTCTGACTTAGCTGTTGTGCAGCGGGAGATGTATGT...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGCTCAGGAGGTATGCCTaGAGAAGCCACGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKLRRYA*RSHGSP
Trigger: GGGGCTTCCGTGGCTTCTCCAGGCATACCTCCTGAG...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATAGTACACGTTCCCAGTaGCTCATCAGAAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDSTRSQ*LIRSTF
Trigger: GAAAGTACTTCTGATGAGCCACTGGGAACGTGTACT...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGACCTTTTATGCACCCTTaGGACAGCCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGPFMHP*DSQGCW
Trigger: CCAGCAGCCCTGGCTGTCCCAAGGGTGCATAAAAGG...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CAA 72 bp GGCTTCTGTGGCAGTGAATTTCCCCTAGAAGGGGGCTaGGACAGTACACGTTCCCAGTGGCTCATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: GFCGSEFPLEGG*DSTRSQWLIRS
Trigger: ACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTTCTAGGGGAAATTCACTGCCACAGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATCTGGATACCCGAAAATaGTACAAACACCTATTCAGC +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDLDTRK*YKHLFS
Trigger: GCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAG...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAGTCATAGAGCTCATCTaGGCAGTTCTCCACACGGGG +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAVIELI*AVLHTG
Trigger: CCCCGTGTGGAGAACTGCCCAGATGAGCTCTATGAC...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATCATTTTGCACACCACTaGATACCCGAAAATGCTACA +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDHFAHH*IPENAT
Trigger: TGTAGCATTTTCGGGTATCCAGTGGTGTGCAAAATG...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCCTGTTTCTAAGGTGTTaGGTTTGGCCACATAGTTGC +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGLFLRC*VWPHSC
Trigger: GCAACTATGTGGCCAAACTCAACACCTTAGAAACAG...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCCATCAAGGGAACGTGTaGCTTCCACACATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPHQGNV*LPHMLD
Trigger: GTCCAGCATGTGTGGAAGTCACACGTTCCCTTGATG...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCGGTCAAACCAAATGGTaGCTCTCAAGACTGAGCATA +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGGQTKW*LSRLSI
Trigger: TATGCTCAGTCTTGAGAGTCACCATTTGGTTTGACC...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCAGTCGTCCGGGTGGATaGCATCATAGGGGTACAAGG +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSSRPGG*HHRGTR
Trigger: CCTTGTACCCCTATGATGGCATCCACCCGGACGACT...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCCTCACGGGCTCCTCCTaGTGGAAGAGAGAGAGATGT +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSLTGSS*WKRERC
Trigger: ACATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAG...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTCACGGGCTCCTCCTaGTGGAAGAGAGAGAGATGT +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCLTGSS*WKRERC
Trigger: ACATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAG...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGCAGAGAGGGGGAGGTTaGAATGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKQRGGG*NELRSH
Trigger: GTGCGATCTCAGCTCATTGCAACCTCCCCCTCTCTG...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCGGCATTAGTTCTCCCTaGGTAGGGAATTTTCCCATA +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGGISSP*VGNFPI
Trigger: TATGGGAAAATTCCCTACCCAGGGAGAACTAATGCC...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTCTCTTCTCCCTTTCCTaGGAGGTCCAGGTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGLFSLS*EVQVSP
Trigger: CGGGCTCACCTGGACCTCCCAGGAAAGGGAGAAGAG...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTCTCTTCTCCCTTTCCTaGGAGGTCCAGGTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLILFSLS*EVQVSP
Trigger: CGGGCTCACCTGGACCTCCCAGGAAAGGGAGAAGAG...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTTTTCCTCTCTAAATaGGGCAGCCACCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCLFLSK*GSHPCQ
Trigger: TTGGCAGGGGTGGCTGCCTCATTTAGAGAGGAAAAG...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATACACAACAGCATAAGTaGAACACATCATGTGATACA +
Preference number: 4 (lower is better)
Translates to: RQGSCACSRAPPAGRERDTQQHK*NTSCDT
Trigger: TGTATCACATGATGTGTTTCACTTATGCTGTTGTGT...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGCATCAAGGGAACGTGTaGCTTCCACACATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKHQGNV*LPHMLD
Trigger: GTCCAGCATGTGTGGAAGTCACACGTTCCCTTGATG...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGAGAAGGTGTCAGAAGCTaGGGTTGCAGAATTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGEGVRS*GCRIES
Trigger: GGACTCAATTCTGCAACCTCAGCTTCTGACACCTTC...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCGAAAGCTGGGCGGTTTaGTCTCATCTGAGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPESWAV*SHLRGV
Trigger: AACACCTCTCAGATGAGATCAAACCGCCCAGCTTTC...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGACCAGAACATTAGCTaGTCGCAGGTCCCGGTGAAT +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSDQNIS*SQVPVN
Trigger: ATTCACCGGGACCTGCGAGCAGCTAATGTTCTGGTC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCCATTTTGCACACCACTaGATACCCGAAAATGCTACA +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGHFAHH*IPENAT
Trigger: TGTAGCATTTTCGGGTATCCAGTGGTGTGCAAAATG...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGATCTGAGAGGTGTTCTTaGCTGAGGAAGCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGSERCS*LRKQEM
Trigger: CATCTCCTGCTTCCTCAGCCAAGAACACCTCTCAGA...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTGCTGCAGGGTCTTCATaGGGTTGGCTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIAAGSS*GWLLPG
Trigger: TCCTGGAAGAAGCCAACCTCATGAAGACCCTGCAGC...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCGCTGCAGGGTCTTCATaGGGTTGGCTTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCAAGSS*GWLLPG
Trigger: TCCTGGAAGAAGCCAACCTCATGAAGACCCTGCAGC...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCTCTTCTCTCCTTTCTTaGAAGACAAGTCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPSSLLS*KTSRPG
Trigger: ACCCGGACGACTTGTCTTTCAAGAAAGGAGAGAAGA...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTGGCGGAGCTCCACGGTaGCTTGAGTTCAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTGGAPR*LEFRVG
Trigger: CCCCACTCTGAACTCAAGTCACCGTGGAGCTCCGCC...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGCCTTTTCACCAACTTaGTGGACTCCCGGGGGATCT +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGAFSPT*WTPGGS
Trigger: AGATCCCCCGGGAGTCCATCAAGTTGGTGAAAAGGC...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTTCCAGGCACGGCAGATaGTCCCCGCACATGAAATCA +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLISRHGR*SPHMKS
Trigger: TGATTTCATGTGCGGGGATCATCTGCCGTGCCTGGA...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGACAAAAACCTTACCACTaGATCAAGGGACCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGQKPYH*IKGPAV
Trigger: CACAGCTGGTCCCTTGATTCAGTGGTAAGGTTTTTG...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCACTGGTTTCTAGCCTGTaGGTCTCCTTTAGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSALVSSL*VSFRFS
Trigger: ACTGAACCTAAAGGAGACTCACAGGCTAGAAACCAG...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCAGAGGTGTTCTTGGCTaGGGAAGCAGGAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCRGVLG*GSRRCP
Trigger: CGGACATCTCCTGCTTCCTCAGCCAAGAACACCTCT...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCGGTTTGATCTCATCTaGGAGGTGTTCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCRFDLI*EVFLAE
Trigger: CTCAGCCAAGAACACCTCTCAGATGAGATCAAACCG...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCCACAAGGAAACAATATaGAGCGAAGCCAATCTATTC +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGHKETI*SEANLF
Trigger: GAATAGATTGGCTTCGCTTCATATTGTTTCCTTGTG...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCACGAGCTTGTCATGCTaGAGGGTCTTCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCTSLSC*RVFMRL
Trigger: CAACCTCATGAAGACCCTGCAGCATGACAAGCTCGT...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGATTGGAAGCAGCACTTTaGCACCTTCATCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGLEAAL*HLHRSS
Trigger: TGAAGAGCGATGAAGGTGGCAAAGTGCTGCTTCCAA...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTTCCGCTCGATGTATaGCATTCCCTCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCLPLDV*HSLCNL
Trigger: CAGATTGCAGAGGGAATGGCATACATCGAGCGGAAG...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCATTCCACCATTCTCCATaGTCCTCCAGGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAFHHSP*SSRTFI
Trigger: GATGAAAGTCCTGGAGGAGCATGGAGAATGGTGGAA...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCAGCGCTATTTCCTGGTaGCAAAAGCTGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCSAISW*QKLPFC
Trigger: GCAGAAAGGCAGCTTTTGGCACCAGGAAATAGCGCT...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGACACAGACATAGTTCCTaGCTTCAGGGTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGHRHSS*LQGFHS
Trigger: GCTGTGAAAACCCTGAAGCCAGGAACTATGTCTGTG...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCGTATGGGGAGGCTGCTaGCCGGGAACGCTGGACGCG +
Preference number: 4 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRVWGGC*PGTLDA
Trigger: CGCGTCCAGCGTTCCCGGCCAGCAGCCTCCCCATAC...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTGCCACCCCTGCCAAATaGACGGGTCTCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTATPAK*TGLPVL
Trigger: GAGCACAGGGAGACCCGTCCATTTGGCAGGGGTGGC...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCTCTGAGAGGTGTTCTTaGCTGAGGAAGCAGGAGATG +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCSERCS*LRKQEM
Trigger: CATCTCCTGCTTCCTCAGCCAAGAACACCTCTCAGA...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCATTCCCTCTGCAATCTaGGCAGAAAAGTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPIPSAI*AEKSMS
Trigger: GCTCATTGACTTTTCTGCTCAGATTGCAGAGGGAAT...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTCTTTTCCTCTCTAAATaGGGCAGCCACCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGLFLSK*GSHPCQ
Trigger: TTGGCAGGGGTGGCTGCCTCATTTAGAGAGGAAAAG...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAGATGATCCCCGCACATaGAATCATAAGTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGDDPRT*NHKCNQ
Trigger: CTGGTTGCACTTATGATTTCATGTGCGGGGATCATC...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGAAGTCCAAGTTGCAACTaGGTGGAGAATCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGSPSCN*VENPSK
Trigger: CTTAGATGGATTCTCCACTCAGTTGCAACTTGGACT...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAAAGATTACCAGCTGCTaGGGACAAGTCCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGKITSC*GQVQVA
Trigger: TGCAACTTGGACTTGTCCTCAGCAGCTGGTAATCTT...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCACATTTTTAAGCTGCTaGCTTCACCTGCAAAATCTA +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGTFLSC*LHLQNL
Trigger: TAGATTTTGCAGGTGAAGTCAGCAGCTTAAAAATGT...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTTGTGAGAGGACGGGGAATAAAGAGAAAGCAGACCCCGACCGGGCACAGTGGCGTGAAACACATCATGTaGTACAGAAGTTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: FVRGRGIKRKQTPTGHSGVKHIM*YRSFHS
Trigger: TGAATGGAAACTTCTGTATCACATGATGTGTTTCAC...GCCACTGTGCCCGGTCGGGGTCTGCTTTCTCTTTATTCCCCGTCCTCTCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGGCAGACTCCACAAGCTaGCGTGGAGATGAGTTTATA +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKADSTS*RGDEFI
Trigger: TATAAACTCATCTCCACGTCAGCTTGTGGAGTCTGC...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCCTGAGGTTGCAGAATTaGGTCCTTTTAGCAGCTACC +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSLRLQN*VLLAAT
Trigger: GGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAG...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTCTCACGAGCTTGTCATaGTGCAGGGTCTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLILTSLS*CRVFMR
Trigger: CCTCATGAAGACCCTGCAGCATGACAAGCTCGTGAG...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCTTCAGCCCCTCATTATaGCTGTCTGTCACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCFSPSL*LSVTGR
Trigger: CCTCCCTGTGACAGACAGGCATAATGAGGGGCTGAA...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCAGCAGGACCTGCGTATaGGGAGGCTGCTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRSRTCV*GGCWPG
Trigger: TCCCGGCCAGCAGCCTCCCCATACGCAGGTCCTGCT...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAATCCCATGGCTTCTGTaGCTTGGGACTAATACAAGC +
Preference number: 4 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGIPWLL*LGTNTS
Trigger: GCTTGTATTAGTCCCAAGCCACAGAAGCCATGGGAT...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAGGCATTAGTTCTCCCTaGGTAGGGAATTTTCCCATA +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAGISSP*VGNFPI
Trigger: TATGGGAAAATTCCCTACCCAGGGAGAACTAATGCC...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGGGTATTGCCCTTCCGTaGCTGTGTAGAAATCATCCA +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKGIALP*LCRNHP
Trigger: TGGATGATTTCTACACAGCCACGGAAGGGCAATACC...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGACTATATTGCTCAGGCTaGTGTCTAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGLYCSG*CLTPEL
Trigger: GAGCTCAGGAGTTAGACACCAGCCTGAGCAATATAG...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCTGCAAGGGGATTCTGTaGAACCTCAGGAGGTATGCC +
Preference number: 4 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCCKGIL*NLRRYA
Trigger: GGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCA...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGTACACGTTCCCAGTaGCTCATCAGAAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSASTRSQ*LIRSTF
Trigger: GAAAGTACTTCTGATGAGCCACTGGGAACGTGTACT...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTTGGGCTCCTCCCTGGTaGCCACAGCGTAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAWAPPW*PQRRAS
Trigger: TGAGGCTCTACGCTGTGGTCACCAGGGAGGAGCCCA...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGAGCAGAAAAGTCAATaGGCTTTGGAAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSEQKSQ*ALEAAL
Trigger: AAGTGCTGCTTCCAAAGCTCATTGACTTTTCTGCTC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGAAATTTTGCACATGAGTaGCTCGGAGACCAGAACATT +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGNFAHE*LGDQNI
Trigger: AATGTTCTGGTCTCCGAGTCACTCATGTGCAAAATT...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGCTGTTTCTAAGGTGTTaGGTTTGGCCACATAGTTGC +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKLFLRC*VWPHSC
Trigger: GCAACTATGTGGCCAAACTCAACACCTTAGAAACAG...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGACATAAGTGCAACCAGTaGTGGTTACTTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGHKCNQ*WLLFLS
Trigger: AGAGAGGAAAAGTAACCATCACTGGTTGCACTTATG...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCACATAAGTGCAACCAGTaGTGGTTACTTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAHKCNQ*WLLFLS
Trigger: AGAGAGGAAAAGTAACCATCACTGGTTGCACTTATG...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGACATTGCAATGGTCTCTaGAACTTTGAGTCCTATGTC +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGHCNGL*NFESYV
Trigger: GACATAGGACTCAAAGTTTCAGAGACCATTGCAATG...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCACACAGAGCAGTTTCTaGGGCTCTTCTCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCTQSSF*GSSPFP
Trigger: AGGAAAGGGAGAAGAGCCTCAGAAACTGCTCTGTGT...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAGCCACTGTGTCTAGCTaGCTGGAGAAGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGATVSS*LEKLLK
Trigger: TTTTAAAAGCTTCTCCAGTCAGCTAGACACAGTGGC...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCGCCACTGTGTCTAGCTaGCTGGAGAAGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCATVSS*LEKLLK
Trigger: TTTTAAAAGCTTCTCCAGTCAGCTAGACACAGTGGC...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGGTCAAACCAAATGGTaGCTCTCAAGACTGAGCATA +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSGQTKW*LSRLSI
Trigger: TATGCTCAGTCTTGAGAGTCACCATTTGGTTTGACC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTGAAGGTGTCAGAAGCTaGGGTTGCAGAATTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIEGVRS*GCRIES
Trigger: GGACTCAATTCTGCAACCTCAGCTTCTGACACCTTC...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGAGATTCTGGAACTGGTTaGGTCTTCAAATCTACTCCA +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGDSGTG*VFKSTP
Trigger: TGGAGTAGATTTGAAGACTCAACCAGTTCCAGAATC...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520220.6
CDS-3UTR GCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTTCTTCCAGGAAGGCTTaGACAGACATAGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLISSRKA*TDIVPG
Trigger: GCCAGGAACTATGTCTGTGCAAGCCTTCCTGGAAGA...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCACGAGCTTGTCATGCTaGAGGGTCTTCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCTSLSC*RVFMRL
Trigger: CAACCTCATGAAGACCCTGCAGCATGACAAGCTCGT...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTAGCGCTATTTCCTGGTaGCAAAAGCTGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGSAISW*QKLPFC
Trigger: GCAGAAAGGCAGCTTTTGGCACCAGGAAATAGCGCT...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGATTCTTCTCAAACGGCTaGACTCAGATGTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGFFSNG*TQMLSS
Trigger: GCTTGACAACATCTGAGTGCAGCCGTTTGAGAAGAA...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGAAGAGAGAGAGATGTaGACGCCACTCCTATGGCAT +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGEEREM*TPLLWH
Trigger: ATGCCATAGGAGTGGCGTGCACATCTCTCTCTCTTC...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCTCCAGCGCTATTTCCTaGTGCCAAAAGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCSSAIS*CQKLPF
Trigger: GAAAGGCAGCTTTTGGCACCAGGAAATAGCGCTGGA...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGACTGGGCTTTGTAATATaGGTCAAACCAAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGLGFVI*VKPNGD
Trigger: GTCACCATTTGGTTTGACCCATATTACAAAGCCCAG...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGCTTTTAAAATAGACTaGCATACATCTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSAFKID*HTSPAA
Trigger: TGCAGCGGGAGATGTATGTCAGTCTATTTTAAAAGC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCGCTTTTAAAATAGACTaGCATACATCTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCAFKID*HTSPAA
Trigger: TGCAGCGGGAGATGTATGTCAGTCTATTTTAAAAGC...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTCCCCTTTGAGAAATaGAACCATCTGAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCLPFEK*NHLRKK
Trigger: CTTTTTCCTCAGATGGTTTCATTTCTCAAAGGGGAG...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTAGCACAAGAGGGCCCTaGGTAAAGAATGTGTGTATG +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLISTRGP*VKNVCM
Trigger: CATACACACATTCTTTACTCAGGGCCCTCTTGTGCT...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGCTGGATACCCGAAAATaGTACAAACACCTATTCAGC +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKLDTRK*YKHLFS
Trigger: GCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAG...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAAGAGACTTGCTATATTaGTCAGGCTGGTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGRDLLY*SGWCLT
Trigger: AGTTAGACACCAGCCTGAGCAATATAGCAAGTCTCT...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAGTCTCCTTGTTCCTCTaGATCTTTAGTTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAVSLFL*IFSLKP
Trigger: AGGTTTCAAACTAAAGATCCAGAGGAACAAGGAGAC...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTGTCATAGAGCTCATCTaGGCAGTTCTCCACACGGGG +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTVIELI*AVLHTG
Trigger: CCCCGTGTGGAGAACTGCCCAGATGAGCTCTATGAC...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTGGTATTGCCCTTCCGTaGCTGTGTAGAAATCATCCA +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIGIALP*LCRNHP
Trigger: TGGATGATTTCTACACAGCCACGGAAGGGCAATACC...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCACAAGTTGCAACTGAGTaGAGAATCCATCTAAGAGTA +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAQVATE*RIHLRV
Trigger: TACTCTTAGATGGATTCTCCACTCAGTTGCAACTTG...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAGAAGGAGGTAGAACTTaGGCAAGTTTAAAGCATGTA +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAEGGRT*ASLKHV
Trigger: TACATGCTTTAAACTTGCCCAAGTTCTACCTCCTTC...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGCAATCAACTCCTTaGTTCTCCAATCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSARQSTP*FSNLKC
Trigger: ACATTTCAGATTGGAGAACCAAGGAGTTGATTGCCT...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCTCCACCAGCCAGAAGTaGAAAATAAAGGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSSTSQK*KIKEDA
Trigger: AGCATCTTCCTTTATTTTCCACTTCTGGCTGGTGGA...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATTCCCTCTGCAATCTaGGCAGAAAAGTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIIPSAI*AEKSMS
Trigger: GCTCATTGACTTTTCTGCTCAGATTGCAGAGGGAAT...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCTCTGGATCTTTAGTTTaGAACCTCTGTCCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCSGSLV*NLCPGK
Trigger: TTTACCTGGACAGAGGTTTCAAACTAAAGATCCAGA...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGATCCTGGTTATATCCTTaGAAAACCACTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGSWLYP*KTTLLF
Trigger: AAACAGAAGAGTGGTTTTTCAAGGATATAACCAGGA...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGAATTTTCCCATAGGTaGCAATTTCGTATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSEFSHR*QFRIGG
Trigger: TCCTCCTATACGAAATTGTCACCTATGGGAAAATTC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCGAATTTTCCCATAGGTaGCAATTTCGTATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCEFSHR*QFRIGG
Trigger: TCCTCCTATACGAAATTGTCACCTATGGGAAAATTC...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTAGTCCAAGTTGCAACTaGGTGGAGAATCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGSPSCN*VENPSK
Trigger: CTTAGATGGATTCTCCACTCAGTTGCAACTTGGACT...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCTGGTCTCTGAAACTTTaGGTCCTATGTCCATTTGTA +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSWSLKL*VLCPFV
Trigger: TACAAATGGACATAGGACTCAAAGTTTCAGAGACCA...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCATGAGTTTATACTTATaGTGCTTTCAGTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: AGERALGPAFNLFEGVRSMSLYL*CFQCPR
Trigger: TCGAGGGCACTGAAAGCATCATAAGTATAAACTCAT...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCAAGCTGACGTGGAGATaGGTTTATACTTATGATGCT +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCKLTWR*VYTYDA
Trigger: AGCATCATAAGTATAAACTCATCTCCACGTCAGCTT...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGATCCAGGGTCGTTGTGTaGGTTAGAGATAATTTTTAT +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGSRVVV*VRDNFY
Trigger: ATAAAAATTATCTCTAACTCACACAACGACCCTGGA...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCTCCAGGGTCGTTGTGTaGGTTAGAGATAATTTTTAT +
Preference number: 4 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPSRVVV*VRDNFY
Trigger: ATAAAAATTATCTCTAACTCACACAACGACCCTGGA...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTATGCCATTCCCTCTaGAATCTGAGCAGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGVCHSL*NLSRKV
Trigger: GACTTTTCTGCTCAGATTGCAGAGGGAATGGCATAC...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTGTTATTATCCTTTTATaGACCCTTGGGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIVIILL*TLGTAR
Trigger: CCTGGCTGTCCCAAGGGTGCATAAAAGGATAATAAC...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTAAAGTCAATGAGCTTTaGAAGCAGCACTTTGCCACC +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIKVNEL*KQHFAT
Trigger: GGTGGCAAAGTGCTGCTTCCAAAGCTCATTGACTTT...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGGTCTCCTTGTTCCTCTaGATCTTTAGTTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKVSLFL*IFSLKP
Trigger: AGGTTTCAAACTAAAGATCCAGAGGAACAAGGAGAC...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGAAAACATAGAGCTAGTTaGGTGCATTTTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGKHRAS*VHFWRE
Trigger: TTCTCTCCAAAAATGCACCCAACTAGCTCTATGTTT...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCCTCCATGTAACATATTaGGTAATACTTGTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPLHVTY*VILVVL
Trigger: CAGAACCACAAGTATTACCCAATATGTTACATGGAG...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCCCTTTTATGCACCCTTaGGACAGCCAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRPFMHP*DSQGCW
Trigger: CCAGCAGCCCTGGCTGTCCCAAGGGTGCATAAAAGG...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTTCCGACAACTGGCTGTaGAACCTGGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTSDNWL*NLAVTS
Trigger: TGATGTCACTGCCAGGTTCCACAGCCAGTTGTCGGA...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
3UTR CAA 72 bp AAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTaGAACCTCCTGCCACCGTGGCTTATTAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: KLTGEKFSEQNR*NLLPPWLIRAL
Trigger: CAAGGCTCTAATAAGCCACGGTGGCAGGAGGTTCAAGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCTCCTGGTTATATCCTTaGAAAACCACTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCSWLYP*KTTLLF
Trigger: AAACAGAAGAGTGGTTTTTCAAGGATATAACCAGGA...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTCTTGGTTCTCCAATCTaGAATGTTCAAAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLILGSPI*NVQRKE
Trigger: CTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAG...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCGGTTTGATCTCATCTaGGAGGTGTTCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTRFDLI*EVFLAE
Trigger: CTCAGCCAAGAACACCTCTCAGATGAGATCAAACCG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCTTCCGCTCGATGTATaGCATTCCCTCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTLPLDV*HSLCNL
Trigger: CAGATTGCAGAGGGAATGGCATACATCGAGCGGAAG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTATCAGAAGTACTTTCTaGAAGGGGATTCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGIRSTF*KGILWN
Trigger: GTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGAT...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCCAGAGAGGGGGAGGTTaGAATGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRQRGGG*NELRSH
Trigger: GTGCGATCTCAGCTCATTGCAACCTCCCCCTCTCTG...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCACTGTTTATTGGACGTTaGATCTCTCACATAAATAGT +
Preference number: 4 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSALFIGR*ISHINS
Trigger: ACTATTTATGTGAGAGATCCAACGTCCAATAAACAG...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519728.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTTCCAGCGCTATTTCCTaGTGCCAAAAGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTSSAIS*CQKLPF
Trigger: GAAAGGCAGCTTTTGGCACCAGGAAATAGCGCTGGA...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGAAACATAGAGCTAGTTaGGTGCATTTTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKKHRAS*VHFWRE
Trigger: TTCTCTCCAAAAATGCACCCAACTAGCTCTATGTTT...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTCCATGTAACATATTaGGTAATACTTGTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCLHVTY*VILVVL
Trigger: CAGAACCACAAGTATTACCCAATATGTTACATGGAG...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTGACTTCCACACATGCTaGACACCAGAGATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTADFHTC*TPEMRP
Trigger: GGGCCTCATCTCTGGTGTCCAGCATGTGTGGAAGTC...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCCTGGGCTTTGTAATATaGGTCAAACCAAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCLGFVI*VKPNGD
Trigger: GTCACCATTTGGTTTGACCCATATTACAAAGCCCAG...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCGAGATGTCCGACAACTaGCTGTGGAACCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNREMSDN*LWNLAV
Trigger: CACTGCCAGGTTCCACAGCCAGTTGTCGGACATCTC...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTAAGATTACCAGCTGCTaGGGACAAGTCCAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTKITSC*GQVQVA
Trigger: TGCAACTTGGACTTGTCCTCAGCAGCTGGTAATCTT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTTGGTCTCTGAAACTTTaGGTCCTATGTCCATTTGTA +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGWSLKL*VLCPFV
Trigger: TACAAATGGACATAGGACTCAAAGTTTCAGAGACCA...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCAAAAACCTTACCACTaGATCAAGGGACCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTQKPYH*IKGPAV
Trigger: CACAGCTGGTCCCTTGATTCAGTGGTAAGGTTTTTG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTATGAGTTTATACTTATaGTGCTTTCAGTGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGMSLYL*CFQCPR
Trigger: TCGAGGGCACTGAAAGCATCATAAGTATAAACTCAT...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTGCAGACTCCACAAGCTaGCGTGGAGATGAGTTTATA +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTADSTS*RGDEFI
Trigger: TATAAACTCATCTCCACGTCAGCTTGTGGAGTCTGC...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTTTGGAAGCAGCACTTTaGCACCTTCATCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTLEAAL*HLHRSS
Trigger: TGAAGAGCGATGAAGGTGGCAAAGTGCTGCTTCCAA...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTTTAATAACATCACCATaGACAGGGTCAAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGLITSP*TGSKSL
Trigger: CAGAGACTTTGACCCTGTGCATGGTGATGTTATTAA...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTTTCAGCCCCTCATTATaGCTGTCTGTCACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAFSPSL*LSVTGR
Trigger: CCTCCCTGTGACAGACAGGCATAATGAGGGGCTGAA...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTATCCCATGGCTTCTGTaGCTTGGGACTAATACAAGC +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTIPWLL*LGTNTS
Trigger: GCTTGTATTAGTCCCAAGCCACAGAAGCCATGGGAT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTGCAAGGGGATTCTGTaGAACCTCAGGAGGTATGCC +
Preference number: 4 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRCKGIL*NLRRYA
Trigger: GGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCA...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTCTGAGATTCTGGAACTaGTTGAGTCTTCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: IRRAGERALGPAFNLFEGLRFWN*LSLQIY
Trigger: GTAGATTTGAAGACTCAACCAGTTCCAGAATCTCAG...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520220.6
3UTR CAA 72 bp ATAAACGGATGTTCAGGTGTTCAGGCAATCAACTCCTaGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: INGCSGVQAINS*VLQSEMFKGRR
Trigger: CCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTGCCTGAACACCTGAACATCCGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTGAAAGCTGGGCGGTTTaGTCTCATCTGAGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAESWAV*SHLRGV
Trigger: AACACCTCTCAGATGAGATCAAACCGCCCAGCTTTC...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTCTTCCAGGAAGGCTTaGACAGACATAGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRSSRKA*TDIVPG
Trigger: GCCAGGAACTATGTCTGTGCAAGCCTTCCTGGAAGA...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTACATACATCTCCCGCTaGACAACAGCTAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTTYISR*TTAKSE
Trigger: TTCTGACTTAGCTGTTGTGCAGCGGGAGATGTATGT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTAATTTTGCACATGAGTaGCTCGGAGACCAGAACATT +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTNFAHE*LGDQNI
Trigger: AATGTTCTGGTCTCCGAGTCACTCATGTGCAAAATT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTTCTTCTCTCCTTTCTTaGAAGACAAGTCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTASSLLS*KTSRPG
Trigger: ACCCGGACGACTTGTCTTTCAAGAAAGGAGAGAAGA...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCTTGGTTCTCCAATCTaGAATGTTCAAAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTLGSPI*NVQRKE
Trigger: CTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCTCCCCTTTGAGAAATaGAACCATCTGAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTLPFEK*NHLRKK
Trigger: CTTTTTCCTCAGATGGTTTCATTTCTCAAAGGGGAG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTTTCCACCATTCTCCATaGTCCTCCAGGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAFHHSP*SSRTFI
Trigger: GATGAAAGTCCTGGAGGAGCATGGAGAATGGTGGAA...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTAGAGACTTGCTATATTaGTCAGGCTGGTGTCTAACT +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTRDLLY*SGWCLT
Trigger: AGTTAGACACCAGCCTGAGCAATATAGCAAGTCTCT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTCACAGACATAGTTCCTaGCTTCAGGGTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAHRHSS*LQGFHS
Trigger: GCTGTGAAAACCCTGAAGCCAGGAACTATGTCTGTG...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCTGAGATTCTGGAACTaGCCTTTGCTGTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTLRFWN*PLLFIG
Trigger: TCCAATAAACAGCAAAGGCCAGTTCCAGAATCTCAG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519728.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTTCCACCAGCCAGAAGTaGAAAATAAAGGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTSTSQK*KIKEDA
Trigger: AGCATCTTCCTTTATTTTCCACTTCTGGCTGGTGGA...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTAAGCTGACGTGGAGATaGGTTTATACTTATGATGCT +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTKLTWR*VYTYDA
Trigger: AGCATCATAAGTATAAACTCATCTCCACGTCAGCTT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCACAAGGAAACAATATaGAGCGAAGCCAATCTATTC +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTHKETI*SEANLF
Trigger: GAATAGATTGGCTTCGCTTCATATTGTTTCCTTGTG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTGTATGCCATTCCCTCTaGAATCTGAGCAGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAVCHSL*NLSRKV
Trigger: GACTTTTCTGCTCAGATTGCAGAGGGAATGGCATAC...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTTCTGGAACTGGCCTTTaGTGTTTATTGGACGTTGGA +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTASGTGL*CLLDVG
Trigger: TCCAACGTCCAATAAACAGCAAAGGCCAGTTCCAGA...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519728.6
CDS-3UTR GCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTTTAATAACATCACCATaGACAGGGTCAAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTLITSP*TGSKSL
Trigger: CAGAGACTTTGACCCTGTGCATGGTGATGTTATTAA...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCAAGTTGCAACTGAGTaGAGAATCCATCTAAGAGTA +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTQVATE*RIHLRV
Trigger: TACTCTTAGATGGATTCTCCACTCAGTTGCAACTTG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTAGGCAATCAACTCCTTaGTTCTCCAATCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTRQSTP*FSNLKC
Trigger: ACATTTCAGATTGGAGAACCAAGGAGTTGATTGCCT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTCATTGCAATGGTCTCTaGAACTTTGAGTCCTATGTC +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAHCNGL*NFESYV
Trigger: GACATAGGACTCAAAGTTTCAGAGACCATTGCAATG...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTACATTTTTAAGCTGCTaGCTTCACCTGCAAAATCTA +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTTFLSC*LHLQNL
Trigger: TAGATTTTGCAGGTGAAGTCAGCAGCTTAAAAATGT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTGTGAAACACATCATGTaGTACAGAAGTTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTVKHIM*YRSFHS
Trigger: TGAATGGAAACTTCTGTATCACATGATGTGTTTCAC...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR GCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTATCAGAAGTACTTTCTaGAAGGGGATTCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAIRSTF*KGILWN
Trigger: GTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGAT...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTTTTTCACAGCCACCTTaGTACTGTTGTTATAGTAAC +
Preference number: 4 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTFSQPP*YCCYSN
Trigger: GTTACTATAACAACAGTACCAAGGTGGCTGTGAAAA...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR TCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTGTATTACGTACTGGTTaGGTCTTCAAATCTACTCCA +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAVLRTG*VFKSTP
Trigger: TGGAGTAGATTTGAAGACTCAACCAGTACGTAATAC...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519728.6
CDS-3UTR TCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCACACAACAGCATAAGTaGAACACATCATGTGATACA +
Preference number: 4 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRTQQHK*NTSCDT
Trigger: TGTATCACATGATGTGTTTCACTTATGCTGTTGTGT...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTTTTCACAGCCACCTTaGTACTGTTGTTATAGTAAC +
Preference number: 4 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRFSQPP*YCCYSN
Trigger: GTTACTATAACAACAGTACCAAGGTGGCTGTGAAAA...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CCA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTTTCAGTATTACGTACTaGTTGAGTCTTCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAFSITY*LSLQIY
Trigger: GTAGATTTGAAGACTCAACCAGTACGTAATACTGAA...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519728.6
CDS-3UTR CAA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATTCCTTTTATGCACCCTaGGGACAGCCAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RQGSCACSRAPPAGRERDSFYAP*GQPGLL
Trigger: CAGCAGCCCTGGCTGTCCCAAGGGTGCATAAAAGGA...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATTCCAGCAAACTGCCCTaGGCCATGTACTCGGTGATG +
Preference number: 5 (lower is better)
Translates to: RQGSCACSRAPPAGRERDSSKLP*AMYSVM
Trigger: CATCACCGAGTACATGGCCAAGGGCAGTTTGCTGGA...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATTTTGGAAGCAGCACTTaGCCACCTTCATCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RQGSCACSRAPPAGRERDFGSST*PPSSLF
Trigger: GAAGAGCGATGAAGGTGGCAAAGTGCTGCTTCCAAA...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATCATGGCTTCTGTGGCTaGGGACTAATACAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: RQGSCACSRAPPAGRERDHGFCG*GLIQAF
Trigger: GAAGGCTTGTATTAGTCCCAAGCCACAGAAGCCATG...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CCA 90 bp CGGGTCTCCCTGTGCTCTAAGGCTGCTGCTGGTATTGCCCTTCCGTaGCTGTGTAGAAATCATCCAGGACGCTCTGTAAGTAGTCAAACG +
Preference number: 5 (lower is better)
Translates to: RVSLCSKAAAGIALP*LCRNHPGRSVSSQT
Trigger: CGTTTGACTACTTACAGAGCGTCCTGGATGATTTCTACACAGCCACGGAAGGGCAATACCAGCAGCAGCCTTAGAGCACAGGGAGACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGAAGTGAACAGAACCGCTaGAACCTCCTGCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGSEQNR*NLLPPW
Trigger: CCACGGTGGCAGGAGGTTCAAGCGGTTCTGTTCACT...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGCCCCTAGAAGGGGGCTaGGACAGTACACGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKPLEGG*DSTRSQ
Trigger: CTGGGAACGTGTACTGTCCAAGCCCCCTTCTAGGGG...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGTCCTTTTATGCACCCTaGGGACAGCCAGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKSFYAP*GQPGLL
Trigger: CAGCAGCCCTGGCTGTCCCAAGGGTGCATAAAAGGA...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCTCCAGCAAACTGCCCTaGGCCATGTACTCGGTGATG +
Preference number: 5 (lower is better)
Translates to: AGERALGPAFNLFEGVRSSSKLP*AMYSVM
Trigger: CATCACCGAGTACATGGCCAAGGGCAGTTTGCTGGA...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGAGCCTTTTCACCAACTaGATGGACTCCCGGGGGATC +
Preference number: 5 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKSLFTN*MDSRGI
Trigger: GATCCCCCGGGAGTCCATCAAGTTGGTGAAAAGGCT...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCGGAAAGCTGGGCGGTTaGATCTCATCTGAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPGKLGG*ISSERC
Trigger: ACACCTCTCAGATGAGATCAAACCGCCCAGCTTTCC...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCAGGCTGCTGCTGGTATaGCCCTTCCGTGGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCRLLLV*PFRGCV
Trigger: TACACAGCCACGGAAGGGCAATACCAGCAGCAGCCT...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AGACAGGGCAGCTGTGCGTGCTCACGGGCTCCTCCTGCTGGAAGAGAGAGAGATATGCAAATAAAAAGCTaGAGATGTTATTGGACGAGG +
Preference number: 5 (lower is better)
Translates to: RQGSCACSRAPPAGRERDMQIKS*RCYWTR
Trigger: CCTCGTCCAATAACATCTCAAGCTTTTTATTTGCAT...ATCTCTCTCTCTTCCAGCAGGAGGAGCCCGTGAGCACGCACAGCTGCCCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AAGGTGTCAGAAGCTGAGGTTGCAGAATTGAGTCCTTTTAGCAGCTACCGCCCCGGCCTTTGCTGTTTATaGGACGTTGGATCTCTCACA +
Preference number: 5 (lower is better)
Translates to: KVSEAEVAELSPFSSYRPGLCCL*DVGSLT
Trigger: TGTGAGAGATCCAACGTCCAATAAACAGCAAAGGCC...GGGGCGGTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGCTTCTGACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519728.6
CDS-3UTR CAA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGATTCTGGAACTGGCCTTaGCTGTTTATTGGACGTTGG +
Preference number: 5 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGFWNWP*LFIGRW
Trigger: CCAACGTCCAATAAACAGCAAAGGCCAGTTCCAGAA...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519728.6
CDS-3UTR CAA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCATGGCTTCTGTGGCTaGGGACTAATACAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCHGFCG*GLIQAF
Trigger: GAAGGCTTGTATTAGTCCCAAGCCACAGAAGCCATG...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGGAGGACAAGTCCAAGTaGCAACTGAGTGGAGAATCC +
Preference number: 5 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKEDKSK*QLSGES
Trigger: GGATTCTCCACTCAGTTGCAACTTGGACTTGTCCTC...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGAGGACAAGTCCAAGTaGCAACTGAGTGGAGAATCC +
Preference number: 5 (lower is better)
Translates to: AGERALGPAFNLFEGVRSEDKSK*QLSGES
Trigger: GGATTCTCCACTCAGTTGCAACTTGGACTTGTCCTC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AAGGGGGCTTGGACAGTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAGGCTGCACTCAGATGTaGTCAAGCAGAGCAAGATTA +
Preference number: 5 (lower is better)
Translates to: KGAWTVHVPSGSSEVLSAGCTQM*SSRARL
Trigger: TAATCTTGCTCTGCTTGACAACATCTGAGTGCAGCC...TGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTACTGTCCAAGCCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAATCTTCTCTCCTTTCTaGAAAGACAAGTCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGIFSPF*KDKSSG
Trigger: CCCGGACGACTTGTCTTTCAAGAAAGGAGAGAAGAT...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCATCTTCTCTCCTTTCTaGAAAGACAAGTCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCIFSPF*KDKSSG
Trigger: CCCGGACGACTTGTCTTTCAAGAAAGGAGAGAAGAT...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGACCAAAATCTGCAATTTaGCACATGAGTGACTCGGAG +
Preference number: 5 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGPKSAI*HMSDSE
Trigger: CTCCGAGTCACTCATGTGCAAAATTGCAGATTTTGG...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGGCTGCACTCAGATGTaGTCAAGCAGAGCAAGATTA +
Preference number: 5 (lower is better)
Translates to: AGERALGPAFNLFEGVRSGCTQM*SSRARL
Trigger: TAATCTTGCTCTGCTTGACAACATCTGAGTGCAGCC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGACAGGCAATCAACTCCTaGGTTCTCCAATCTGAAATG +
Preference number: 5 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGQAINS*VLQSEM
Trigger: CATTTCAGATTGGAGAACCAAGGAGTTGATTGCCTG...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGCTGAGGTTGCAGAATaGAGTCCTTTTAGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: AGERALGPAFNLFEGVRSAEVAE*SPFSSY
Trigger: GTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp ACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTATGCTTTGGAAGCAGCACTTaGCCACCTTCATCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: TPLDTRKCYKHLFSPSLCFGSST*PPSSLF
Trigger: GAAGAGCGATGAAGGTGGCAAAGTGCTGCTTCCAAA...GCATAATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS GCA 90 bp AAGGAAAGCTCCAGCGCTATTTCCTGGTGCCAAAAGCTGCCTTTCTaGGTCCTTCCTGGTTATATCCTTGAAAAACCACTCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: KESSSAISWCQKLPF*VLPGYILEKPLFCF
Trigger: GAAACAGAAGAGTGGTTTTTCAAGGATATAACCAGGAAGGACGCAGAAAGGCAGCTTTTGGCACCAGGAAATAGCGCTGGAGCTTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCGCCATCTGCCTGCTTTaGGTAATGTTTAATCATGTC +
Preference number: 5 (lower is better)
Translates to: AGERALGPAFNLFEGVRSAICLL*VMFNHV
Trigger: GACATGATTAAACATTACCAAAAGCAGGCAGATGGC...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTAGCCTTTTCACCAACTaGATGGACTCCCGGGGGATC +
Preference number: 5 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTSLFTN*MDSRGI
Trigger: GATCCCCCGGGAGTCCATCAAGTTGGTGAAAAGGCT...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTCCCCTAGAAGGGGGCTaGGACAGTACACGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAPLEGG*DSTRSQ
Trigger: CTGGGAACGTGTACTGTCCAAGCCCCCTTCTAGGGG...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGAGTATTACGTACTGGTaGAGTCTTCAAATCTACTCC +
Preference number: 5 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKSITYW*SLQIYS
Trigger: GGAGTAGATTTGAAGACTCAACCAGTACGTAATACT...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519728.6
CDS-3UTR CAA 90 bp GCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGTCAGAAGCTTGTTAAAAGGGACTTaGCTTTCCACCATTCTCCAT +
Preference number: 5 (lower is better)
Translates to: AGERALGPAFNLFEGVRSLLKGT*LSTILH
Trigger: ATGGAGAATGGTGGAAAGCAAAGTCCCTTTTAACAA...GCTTCTGACACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCAGGCTGCTGCTGGTATaGCCCTTCCGTGGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRRLLLV*PFRGCV
Trigger: TACACAGCCACGGAAGGGCAATACCAGCAGCAGCCT...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCAGTGAACAGAACCGCTaGAACCTCCTGCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRSEQNR*NLLPPW
Trigger: CCACGGTGGCAGGAGGTTCAAGCGGTTCTGTTCACT...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GGAGACTGTGTGTGCTGTTCATCAAGGGAACGTGTGACTTCCACACATGCTGGATCTCCATGTAACATATaGGGTAATACTTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: GDCVCCSSRERVTSTHAGSPCNI*GNTCGS
Trigger: AGAACCACAAGTATTACCCAATATGTTACATGGAGA...TCCAGCATGTGTGGAAGTCACACGTTCCCTTGATGAACAGCACACACAGTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTGGAAAGCTGGGCGGTTaGATCTCATCTGAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTGKLGG*ISSERC
Trigger: ACACCTCTCAGATGAGATCAAACCGCCCAGCTTTCC...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp AAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCCTGGAGAAGGATAATTTTTATCATTaGCCAAAGCACAAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: KYFLQGDSVEPQEVCLEKDNFYH*PKHKRA
Trigger: GGCCCTCTTGTGCTTTGGCAAATGATAAAAATTATC...CTTCTCCAGGCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS GCA 90 bp TGTTTCACTTTCTCTAATAAGGAAAGCTCCAGCGCTATTTCCTGGTaGCAAAAGCTGCCTTTCTGCGTCCTTCCTGGTTATATCCTTGAA +
Preference number: 5 (lower is better)
Translates to: CFTFSNKESSSAISW*QKLPFCVLPGYILE
Trigger: TTCAAGGATATAACCAGGAAGGACGCAGAAAGGCAGCTTTTGGCACCAGGAAATAGCGCTGGAGCTTTCCTTATTAGAGAAAGTGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTGTAAGTAGTCAAACGTaGGTCTCTCTTCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLIVSSQT*VSLLPF
Trigger: AAAAGGCAGAAGAGAGACCAACGTTTGACTACTTAC...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GTACACGTTCCCAGTGGCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAATTATTGGGGATTCATaGCAATGGTCTCTGAAACTT +
Preference number: 5 (lower is better)
Translates to: VHVPSGSSEVLSARGFCGIIGDS*QWSLKL
Trigger: AAGTTTCAGAGACCATTGCAATGAATCCCCAATAAT...TCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGCCACTGGGAACGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp GCTCATCAGAAGTACTTTCTGCAAGGGGATTCTGTGGAACCTCAGGAGGTATGCTTAGTTCTGCAATTATaGGGGATTCATTGCAATGGT +
Preference number: 5 (lower is better)
Translates to: AHQKYFLQGDSVEPQEVCLVLQL*GIHCNG
Trigger: ACCATTGCAATGAATCCCCAATAATTGCAGAACTAA...GCATACCTCCTGAGGTTCCACAGAATCCCCTTGCAGAAAGTACTTCTGATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTGATAATTTTTATCATTaGCCAAAGCACAAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: IRRAGERALGPAFNLFEGDNFYH*PKHKRA
Trigger: GGCCCTCTTGTGCTTTGGCAAATGATAAAAATTATC...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp ATCAGAAGAGCTGGGGAGCGAGCCCTAGGACCAGCATTTAATTTATTTGAAGGTATTATTGGGGATTCATaGCAATGGTCTCTGAAACTT +
Preference number: 5 (lower is better)
Translates to: IRRAGERALGPAFNLFEGIIGDS*QWSLKL
Trigger: AAGTTTCAGAGACCATTGCAATGAATCCCCAATAAT...ACCTTCAAATAAATTAAATGCTGGTCCTAGGGCTCGCTCCCCAGCTCTTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp TTGCACACCACTGGATACCCGAAAATGCTACAAACACCTATTCAGCCCCTCATTTTAGTTCTGCAATTATaGGGGATTCATTGCAATGGT +
Preference number: 5 (lower is better)
Translates to: LHTTGYPKMLQTPIQPLILVLQL*GIHCNG
Trigger: ACCATTGCAATGAATCCCCAATAATTGCAGAACTAA...AATGAGGGGCTGAATAGGTGTTTGTAGCATTTTCGGGTATCCAGTGGTGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTGTAAGTAGTCAAACGTaGGTCTCTCTTCTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTVSSQT*VSLLPF
Trigger: AAAAGGCAGAAGAGAGACCAACGTTTGACTACTTAC...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTGCTGAGGTTGCAGAATaGAGTCCTTTTAGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAAEVAE*SPFSSY
Trigger: GTAGCTGCTAAAAGGACTCAATTCTGCAACCTCAGC...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CCA 90 bp GGACGTTGGATCTCTCACATAAATAGTTCTTTCAGTATTACGTACTaGTTGAGTCTTCAAATCTACTCCATCGTCACTCAAGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GRWISHINSSFSITY*LSLQIYSIVTQAVF
Trigger: AAAGACAGCTTGAGTGACGATGGAGTAGATTTGAAGACTCAACCAGTACGTAATACTGAAAGAACTATTTATGTGAGAGATCCAACGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520050.1
CDS-3UTR CAA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTGCCATCTGCCTGCTTTaGGTAATGTTTAATCATGTC +
Preference number: 5 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAAICLL*VMFNHV
Trigger: GACATGATTAAACATTACCAAAAGCAGGCAGATGGC...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp CAATCAACTCCTTGGTTCTCCAATCTGAAATGTTCAAAGGAAGGAGGTAGAACTCAGCATTTAATTTATTaGAAGGTGTCAGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: QSTPWFSNLKCSKEGGRTQHLIY*KVSEAE
Trigger: CTCAGCTTCTGACACCTTCAAATAAATTAAATGCTG...AGTTCTACCTCCTTCCTTTGAACATTTCAGATTGGAGAACCAAGGAGTTGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCAGATTCTGGAACTGGTaGAGTCTTCAAATCTACTCC +
Preference number: 5 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRRFWNW*SLQIYS
Trigger: GGAGTAGATTTGAAGACTCAACCAGTTCCAGAATCT...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520220.6
CDS-3UTR CAA 90 bp TACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCATGCAAATAAAAAGCTaGAGATGTTATTGGACGAGG +
Preference number: 5 (lower is better)
Translates to: YRSFHSKLTGEKFSEQNRMQIKS*RCYWTR
Trigger: CCTCGTCCAATAACATCTCAAGCTTTTTATTTGCAT...GCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS-3UTR CAA 90 bp ACAGAAGTTTCCATTCAAAGCTTACAGGAGAAAAATTTAGTGAACAGAACCGCTCAGCATTTAATTTATTaGAAGGTGTCAGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: TEVSIQSLQEKNLVNRTAQHLIY*KVSEAE
Trigger: CTCAGCTTCTGACACCTTCAAATAAATTAAATGCTG...AGCGGTTCTGTTCACTAAATTTTTCTCCTGTAAGCTTTGAATGGAAACTTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CCA 72 bp GGGGGCGCGACGGGGCGGCCCAGCAGGACCTGCGTATaGGGAGGCTGCTGGCCGGGAACGCTGGACGCGCGG +
Preference number: 6 (lower is better)
Translates to: GGATGRPSRTCV*GGCWPGTLDAR
Trigger: CCGCGCGTCCAGCGTTCCCGGCCAGCAGCCTCCCCATACGCAGGTCCTGCTGGGCCGCCCCGTCGCGCCCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CCA 72 bp GAGGGAAAACCTGGATGCAGAGGTGACGTGTCCACGTaGCTGCAGCTTCTGTTCTGCCGGGGCTGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: EGKPGCRGDVST*LQLLFCRGWRV
Trigger: CACTCTCCAGCCCCGGCAGAACAGAAGCTGCAGCCACGTGGACACGTCACCTCTGCATCCAGGTTTTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420292.1
CDS GCA 72 bp ATCCCAGGGGCCAAGACTGTAGAGGGAAAACCTGGATaGAGAGGTGACGTGTCCACGTGGCTGCAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: IPGAKTVEGKPG*RGDVSTWLQLL
Trigger: CAGAAGCTGCAGCCACGTGGACACGTCACCTCTGCATCCAGGTTTTCCCTCTACAGTCTTGGCCCCTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420292.1
CDS CAA 72 bp GACGGGTCTCCCTGTGCTCTAAGGCTGCTGCTGGTATaGCCCTTCCGTGGCTGTGTAGAAATCATCCAGGAC +
Preference number: 6 (lower is better)
Translates to: DGSPCALRLLLV*PFRGCVEIIQD
Trigger: GTCCTGGATGATTTCTACACAGCCACGGAAGGGCAATACCAGCAGCAGCCTTAGAGCACAGGGAGACCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CCA 72 bp CTGTGCTCTAAGGCTGCTGCTGGTATTGCCCTTCCGTaGCTGTGTAGAAATCATCCAGGACGCTCTGTAAGT +
Preference number: 6 (lower is better)
Translates to: LCSKAAAGIALP*LCRNHPGRSVS
Trigger: ACTTACAGAGCGTCCTGGATGATTTCTACACAGCCACGGAAGGGCAATACCAGCAGCAGCCTTAGAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CCA 72 bp TTTCCAGCACATTTTCATAATGTCATAGAGCTCATCTaGGCAGTTCTCCACACGGGGCATCCTGTAGCCCTG +
Preference number: 6 (lower is better)
Translates to: FPAHFHNVIELI*AVLHTGHPVAL
Trigger: CAGGGCTACAGGATGCCCCGTGTGGAGAACTGCCCAGATGAGCTCTATGACATTATGAAAATGTGCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS TCA 72 bp ATGCCATTCCCTCTGCAATCTGAGCAGAAAAGTCAATaGGCTTTGGAAGCAGCACTTTGCCACCTTCATCGC +
Preference number: 6 (lower is better)
Translates to: MPFPLQSEQKSQ*ALEAALCHLHR
Trigger: GCGATGAAGGTGGCAAAGTGCTGCTTCCAAAGCTCATTGACTTTTCTGCTCAGATTGCAGAGGGAATGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420292.1
ENST00000519728.6
ENST00000520220.6
CDS CCA 72 bp TCCCTCTGCAATCTGAGCAGAAAAGTCAATGAGCTTTaGAAGCAGCACTTTGCCACCTTCATCGCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: SLCNLSRKVNEL*KQHFATFIALQ
Trigger: CTGAAGAGCGATGAAGGTGGCAAAGTGCTGCTTCCAAAGCTCATTGACTTTTCTGCTCAGATTGCAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420292.1
ENST00000519728.6
ENST00000520220.6
CDS CCA 72 bp ACTTTCTCTAATAAGGAAAGCTCCAGCGCTATTTCCTaGTGCCAAAAGCTGCCTTTCTGCGTCCTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: TFSNKESSSAIS*CQKLPFCVLPG
Trigger: ACCAGGAAGGACGCAGAAAGGCAGCTTTTGGCACCAGGAAATAGCGCTGGAGCTTTCCTTATTAGAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS GCA 72 bp TTCTCTAATAAGGAAAGCTCCAGCGCTATTTCCTGGTaGCAAAAGCTGCCTTTCTGCGTCCTTCCTGGTTAT +
Preference number: 6 (lower is better)
Translates to: FSNKESSSAISW*QKLPFCVLPGY
Trigger: ATAACCAGGAAGGACGCAGAAAGGCAGCTTTTGGCACCAGGAAATAGCGCTGGAGCTTTCCTTATTAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CAA 72 bp GCCATCATAGGGGTACAAGGCTACCACAATGTCTCCTaGTTCCTCTGGATCTTTAGTTTGAAACCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: AIIGVQGYHNVS*FLWIFSLKPLS
Trigger: GGACAGAGGTTTCAAACTAAAGATCCAGAGGAACAAGGAGACATTGTGGTAGCCTTGTACCCCTATGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519728.6
ENST00000520050.1
ENST00000520220.6
CDS CAA 72 bp AATCTACTCCATCGTCACTCAAGCTGTCTTTCCCTTTaGATTTTATACATCCCATATTTCCCGCTCGCGGTG +
Preference number: 6 (lower is better)
Translates to: NLLHRHSSCLSL*ILYIPYFPLAV
Trigger: CACCGCGAGCGGGAAATATGGGATGTATAAAATCAAAAGGGAAAGACAGCTTGAGTGACGATGGAGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CAA 90 bp GAGTCTTCAAATCTACTCCATCGTCACTCAAGCTGTCTTTCCCTTTaGATTTTATACATCCCATATTTCCCGCTCGCGGTGAAAGTTTCG +
Preference number: 6 (lower is better)
Translates to: ESSNLLHRHSSCLSL*ILYIPYFPLAVKVS
Trigger: CGAAACTTTCACCGCGAGCGGGAAATATGGGATGTATAAAATCAAAAGGGAAAGACAGCTTGAGTGACGATGGAGTAGATTTGAAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CAA 72 bp AGAAATCATCCAGGACGCTCTGTAAGTAGTCAAACGTaGGTCTCTCTTCTGCCTTTTCTTTCCAGCACATTT +
Preference number: 6 (lower is better)
Translates to: RNHPGRSVSSQT*VSLLPFLSSTF
Trigger: AAATGTGCTGGAAAGAAAAGGCAGAAGAGAGACCAACGTTTGACTACTTACAGAGCGTCCTGGATGATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520220.6
CDS CAA 90 bp CGTTGGATCTCTCACATAAATAGTTCTTTCAGTATTACGTACTGGTaGAGTCTTCAAATCTACTCCATCGTCACTCAAGCTGTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: RWISHINSSFSITYW*SLQIYSIVTQAVFP
Trigger: GGGAAAGACAGCTTGAGTGACGATGGAGTAGATTTGAAGACTCAACCAGTACGTAATACTGAAAGAACTATTTATGTGAGAGATCCAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520050.1
CDS CAA 90 bp GAGTCTTCAAATCTACTCCATCGTCACTCAAGCTGTCTTTCCCTTTaGATTTTATACATCCCATATTTCCGAACAGATTCTCTGGACACT +
Preference number: 6 (lower is better)
Translates to: ESSNLLHRHSSCLSL*ILYIPYFRTDSLDT
Trigger: AGTGTCCAGAGAATCTGTTCGGAAATATGGGATGTATAAAATCAAAAGGGAAAGACAGCTTGAGTGACGATGGAGTAGATTTGAAGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520050.1
CDS CCA 72 bp AGATTCTGGAACTGGCCTTTGCTGTTTATTGGACGTTaGATCTCTCACATAAATAGTTCTTTCAGTATTACG +
Preference number: 6 (lower is better)
Translates to: RFWNWPLLFIGR*ISHINSSFSIT
Trigger: CGTAATACTGAAAGAACTATTTATGTGAGAGATCCAACGTCCAATAAACAGCAAAGGCCAGTTCCAGAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519728.6
ENST00000520050.1