Pregenerated sensors for LYAR (Homo sapiens)
Ensembl gene IDs: ENSG00000145220Ensembl transcript IDs: ENST00000343470.9, ENST00000452476.5, ENST00000502917.1, ENST00000513174.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCAGCCAGCGCCCGCCAACGGTTTCAACCGGCCGCGGGGAGCACGTaGACTCGCCGCCGCCAGCCCAGCGCCGCAGCTACCTGCCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: SASARQRFQPAAGST*TRRRQPSAAATCLS Trigger: TGAGAGGCAGGTAGCTGCGGCGCTGGGCTGGCGGCGGCGAGTCCACGTGCTCCCCGCGGCCGGTTGAAACCGTTGGCGGGCGCTGGCTGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343470.9 |
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| CDS GCA 90 bp | TTCAACTTCCGAGTGCCTCCGCTTCCTCTTCCCTGCGCCCACGCGTaGCTCTTCCTCACTGGCGCTGTCCTTGCGCTGCTTCTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FNFRVPPLPLPCAHA*LFLTGAVLALLLLL Trigger: AAGAAGAAGAAGCAGCGCAAGGACAGCGCCAGTGAGGAAGAGGCACGCGTGGGCGCAGGGAAGAGGAAGCGGAGGCACTCGGAAGTTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343470.9 ENST00000452476.5 |
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| CDS TCA 90 bp | GGTCACCCTAAGTCCAGGACTCCTGCCACTTCCCCAGAGCAGGAGTaGGATCTGAATGGAACTCCTTCCTCCATGCGTAACCCAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: GHPKSRTPATSPEQE*DLNGTPSSMRNPEG Trigger: CCCCTCTGGGTTACGCATGGAGGAAGGAGTTCCATTCAGATCTCACTCCTGCTCTGGGGAAGTGGCAGGAGTCCTGGACTTAGGGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513174.1 |
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| CDS GCA 90 bp | CACGGCGTCTTTCACTTTGGAGGCTGGAACCTTGGTGGAGATTTCTaGATGTGGATTTGCCACTGGGTGGAGTGGCCGTTGATCCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: HGVFHFGGWNLGGDF*MWICHWVEWPLILF Trigger: GAACAGGATCAACGGCCACTCCACCCAGTGGCAAATCCACATGCAGAAATCTCCACCAAGGTTCCAGCCTCCAAAGTGAAAGACGCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343470.9 ENST00000452476.5 |
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| CDS GCA 90 bp | TGCCGTTCTTCCTTTCTTTCTCTTTTATTCTTCTTCACCTCCCCTTaGTGTTCCACGGCGTCTTTCACTTTGGAGGCTGGAACCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: CRSSFLSLLFFFTSP*CSTASFTLEAGTLV Trigger: CACCAAGGTTCCAGCCTCCAAAGTGAAAGACGCCGTGGAACAGCAAGGGGAGGTGAAGAAGAATAAAAGAGAAAGAAAGGAAGAACGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343470.9 ENST00000452476.5 |
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| CDS GCA 90 bp | GGCAACCCAGATTCACACGCAGTAGTTATTCTGATCCTAAGTATGTaGTCTGGACCGCTACATCCTAAGGCCTCCTCTTTAGGGACTGAT | + |
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Preference number: 5 (lower is better) Translates to: GNPDSHAVVILILSM*SGPLHPKASSLGTD Trigger: ATCAGTCCCTAAAGAGGAGGCCTTAGGATGTAGCGGTCCAGAGCACATACTTAGGATCAGAATAACTACTGCGTGTGAATCTGGGTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513174.1 |
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| CDS GCA 90 bp | CTACCCTTCAAAGGACTGGCTCTTAAGAGTGAGCAGGTGCCCATGTaGTATTGGCATGACAAACTCCTAGATAGAGTTGTATGTAATGAA | + |
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Preference number: 5 (lower is better) Translates to: LPFKGLALKSEQVPM*YWHDKLLDRVVCNE Trigger: TTCATTACATACAACTCTATCTAGGAGTTTGTCATGCCAATAGCACATGGGCACCTGCTCACTCTTAAGAGCCAGTCCTTTGAAGGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502917.1 |
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| CDS CCA 90 bp | TTCAAAGGACTGGCTCTTAAGAGTGAGCAGGTGCCCATGTGCTATTaGCATGACAAACTCCTAGATAGAGTTGTATGTAATGAACTCAAC | + |
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Preference number: 5 (lower is better) Translates to: FKGLALKSEQVPMCY*HDKLLDRVVCNELN Trigger: GTTGAGTTCATTACATACAACTCTATCTAGGAGTTTGTCATGCCAATAGCACATGGGCACCTGCTCACTCTTAAGAGCCAGTCCTTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502917.1 |
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| CDS CAA 72 bp | CTGAAGCCCAGTCGGGCGGTGACCAATCGTCCTGGTTaGGCCAGGCCCGAGGGAGTTCCCAGGACGCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: LKPSRAVTNRPG*ARPEGVPRTPD Trigger: GTCCGGCGTCCTGGGAACTCCCTCGGGCCTGGCCAAACCAGGACGATTGGTCACCGCCCGACTGGGCTTCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513174.1 |
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| CDS GCA 72 bp | CGAGTGCCTCCGCTTCCTCTTCCCTGCGCCCACGCGTaGCTCTTCCTCACTGGCGCTGTCCTTGCGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RVPPLPLPCAHA*LFLTGAVLALL Trigger: AAGCAGCGCAAGGACAGCGCCAGTGAGGAAGAGGCACGCGTGGGCGCAGGGAAGAGGAAGCGGAGGCACTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343470.9 ENST00000452476.5 |
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| CDS CCA 72 bp | AAGCCTGAAGCCCAGTCGGGCGGTGACCAATCGTCCTaGTTTGGCCAGGCCCGAGGGAGTTCCCAGGACGCC | + |
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Preference number: 6 (lower is better) Translates to: KPEAQSGGDQSS*FGQARGSSQDA Trigger: GGCGTCCTGGGAACTCCCTCGGGCCTGGCCAAACCAGGACGATTGGTCACCGCCCGACTGGGCTTCAGGCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513174.1 |
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| CDS TCA 72 bp | ATGGAACTCCTTCCTCCATGCGTAACCCAGAGGGGCTaGCGGTGGAAATCCCGTCCCTCCCCTACTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: MELLPPCVTQRG*RWKSRPSPTHS Trigger: AGAGTGAGTAGGGGAGGGACGGGATTTCCACCGTCAGCCCCTCTGGGTTACGCATGGAGGAAGGAGTTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513174.1 |
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| CDS TCA 72 bp | AAGTCCAGGACTCCTGCCACTTCCCCAGAGCAGGAGTaGGATCTGAATGGAACTCCTTCCTCCATGCGTAAC | + |
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Preference number: 6 (lower is better) Translates to: KSRTPATSPEQE*DLNGTPSSMRN Trigger: GTTACGCATGGAGGAAGGAGTTCCATTCAGATCTCACTCCTGCTCTGGGGAAGTGGCAGGAGTCCTGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513174.1 |
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| CDS CCA 72 bp | TCACCTCCCCTTGCTGTTCCACGGCGTCTTTCACTTTaGAGGCTGGAACCTTGGTGGAGATTTCTGCATGTG | + |
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Preference number: 6 (lower is better) Translates to: SPPLAVPRRLSL*RLEPWWRFLHV Trigger: CACATGCAGAAATCTCCACCAAGGTTCCAGCCTCCAAAGTGAAAGACGCCGTGGAACAGCAAGGGGAGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343470.9 ENST00000452476.5 |
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| CDS GCA 72 bp | TTTCACTTTGGAGGCTGGAACCTTGGTGGAGATTTCTaGATGTGGATTTGCCACTGGGTGGAGTGGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: FHFGGWNLGGDF*MWICHWVEWPL Trigger: CAACGGCCACTCCACCCAGTGGCAAATCCACATGCAGAAATCTCCACCAAGGTTCCAGCCTCCAAAGTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343470.9 ENST00000452476.5 |
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| CDS CAA 90 bp | CTGCCGTTCTTCCTTTCTTTCTCTTTTATTCTTCTTCACCTCCCCTaGCTGTTCCACGGCGTCTTTCACTTTGGAGGCTGGAACCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LPFFLSFSFILLHLP*LFHGVFHFGGWNLG Trigger: ACCAAGGTTCCAGCCTCCAAAGTGAAAGACGCCGTGGAACAGCAAGGGGAGGTGAAGAAGAATAAAAGAGAAAGAAAGGAAGAACGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000343470.9 ENST00000452476.5 |
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| CDS GCA 72 bp | AAAGGACTGGCTCTTAAGAGTGAGCAGGTGCCCATGTaGTATTGGCATGACAAACTCCTAGATAGAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: KGLALKSEQVPM*YWHDKLLDRVV Trigger: TACAACTCTATCTAGGAGTTTGTCATGCCAATAGCACATGGGCACCTGCTCACTCTTAAGAGCCAGTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502917.1 |
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| CDS GCA 72 bp | GATTCACACGCAGTAGTTATTCTGATCCTAAGTATGTaGTCTGGACCGCTACATCCTAAGGCCTCCTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: DSHAVVILILSM*SGPLHPKASSL Trigger: TAAAGAGGAGGCCTTAGGATGTAGCGGTCCAGAGCACATACTTAGGATCAGAATAACTACTGCGTGTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513174.1 |
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| CDS CCA 72 bp | CTGGCTCTTAAGAGTGAGCAGGTGCCCATGTGCTATTaGCATGACAAACTCCTAGATAGAGTTGTATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LALKSEQVPMCY*HDKLLDRVVCN Trigger: ATTACATACAACTCTATCTAGGAGTTTGTCATGCCAATAGCACATGGGCACCTGCTCACTCTTAAGAGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502917.1 |
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| CDS GCA 72 bp | CATAGCCTTTGCCACCATACTTCTGATCTTCACTTATaGATTTCACGTGGTTTTTATAGTCATCGCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HSLCHHTSDLHL*ISRGFYSHRPR Trigger: TCTGGGGCGATGACTATAAAAACCACGTGAAATGCATAAGTGAAGATCAGAAGTATGGTGGCAAAGGCTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000343470.9 ENST00000452476.5 ENST00000513174.1 |
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