RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LY9 (Homo sapiens)

Ensembl gene IDs: ENSG00000122224

Ensembl transcript IDs: ENST00000263285.11, ENST00000368035.1, ENST00000368037.9, ENST00000368039.2, ENST00000392203.8, ENST00000471816.1, ENST00000474998.1, ENST00000479663.2, ENST00000480837.5, ENST00000485624.1, ENST00000490902.1

Found 546 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGGGTCCCATCGGCAGGACCCTTCCAGCTCTGCTGCGCGGCGGTaGGGTGGGGATGGCGGAGCGGTCTCCAGTGGCAGGTGGGGGCGA +
Preference number: 1 (lower is better)
Translates to: AGSHRQDPSSSAARR*GGDGGAVSSGRWGR
Trigger: TCGCCCCCACCTGCCACTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGTCCTGCCGATGGGACCCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR TCA 90 bp GAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTaGCCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTG +
Preference number: 1 (lower is better)
Translates to: EGGVKDSWSRPLSNI*PVLVEFRGGNAISV
Trigger: CACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR TCA 90 bp CTTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATaGCGTTCTCAATCTCTGTGTCTACTGAGATGTTTAGGGGGAGAG +
Preference number: 1 (lower is better)
Translates to: LWDVRKQEHFWDQSR*RSQSLCLLRCLGGE
Trigger: CTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
3UTR-3UTR TCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGTCTGCTGCGCGGCGGTaGGGTGGGGATGGCGGAGCG +
Preference number: 2 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSSAARR*GGDGGA
Trigger: CGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGA...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR-3UTR CCA 90 bp TCCGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTGCGCGGCGGTGAGGTaGGGATGGCGGAGCGGTCTC +
Preference number: 2 (lower is better)
Translates to: SASWVQPRTVGLHPGDPSCAAVR*GWRSGL
Trigger: GAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCA...GCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR-3UTR GCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGCCCTTCCAGCTCTGCTaGGCGGCGGTGAGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSPFQLC*AAVRWG
Trigger: TCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGG...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR-3UTR GCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGGGACCCTTCCAGCTCTaGTGCGCGGCGGTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSGPFQL*CAAVRW
Trigger: CCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGTCC...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR-3UTR GCA 90 bp TCCGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCGCGGGACCCGCATGCTaGCCGAGGAGTCTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: SASWVQPRTVGLHPGDPSAGPAC*PRSLCR
Trigger: CCTGCAAAGACTCCTCGGGCAGCATGCGGGTCCCGC...GCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR-3UTR GCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGGAAATGGGTGCAGTGTaGGGGACCCGCATGCTGCCC +
Preference number: 2 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSEMGAV*GTRMLP
Trigger: GGGCAGCATGCGGGTCCCGCACACTGCACCCATTTC...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR-3UTR GCA 90 bp CGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCATGGCCTCCCGCGCCTaGAGGGGACATCCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: RIMGAAPHCGPASRGSQLMASRA*RGHPGN
Trigger: ATTTCCTGGATGTCCCCTGCAGGCGCGGGAGGCCAT...GAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGAGCCCCAGGCCCCATaGGGTCCAGCTGACTTTCCA +
Preference number: 2 (lower is better)
Translates to: QLVQAPQQHLTSLGRISREPQAP*GPADFP
Trigger: TGGAAAGTCAGCTGGACCTCATGGGGCCTGGGGCTC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTCCCATGAGGTCCAGCTaGCTTTCCAACCCCACGGTC +
Preference number: 2 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACPMRSS*LSNPTV
Trigger: GACCGTGGGGTTGGAAAGTCAGCTGGACCTCATGGG...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGACCCATGAGGTCCAGCTaGCTTTCCAACCCCACGGTC +
Preference number: 2 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRPMRSS*LSNPTV
Trigger: GACCGTGGGGTTGGAAAGTCAGCTGGACCTCATGGG...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp TCAATCTCTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCCTAGGCTGCACCATCATCCCTaGAGCCCTGGAGAAAGCGGG +
Preference number: 2 (lower is better)
Translates to: SISVSTEMFRGRVTEPPRLHHHP*SPGESG
Trigger: CCCGCTTTCTCCAGGGCTTCAGGGATGATGGTGCAG...CCTAGGGGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474998.1
3UTR CAA 90 bp CCCATAGGCTCCAAGAAGGAGCCTGTGTCTGAACTATTAATGGGTTaGGGAGTCCTTAAGGGTGAGAAGGAGGGGGAGGGGCCACATCCA +
Preference number: 2 (lower is better)
Translates to: PIGSKKEPVSELLMG*GVLKGEKEGEGPHP
Trigger: TGGATGTGGCCCCTCCCCCTCCTTCTCACCCTTAAGGACTCCCAAACCCATTAATAGTTCAGACACAGGCTCCTTCTTGGAGCCTATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATCCCATGAGGTCCAGCTaGCTTTCCAACCCCACGGTC +
Preference number: 2 (lower is better)
Translates to: APQQHLTSLGRISRRKRYPMRSS*LSNPTV
Trigger: GACCGTGGGGTTGGAAAGTCAGCTGGACCTCATGGG...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp ACGTTCTCAATCTCTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCACCACTGTTGGGGCTaGGTCCTTTCCAGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: TFSISVSTEMFRGRVTEPHHCWG*VLSRGS
Trigger: AGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTG...GGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGAGAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
3UTR-3UTR TCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGCCCATGAGGTCCAGCTaGCTTTCCAACCCCACGGTC +
Preference number: 2 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAPMRSS*LSNPTV
Trigger: GACCGTGGGGTTGGAAAGTCAGCTGGACCTCATGGG...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCACATCCAGGCATCTCTaGGGCACTGAAGGAAATTCT +
Preference number: 2 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGATSRHL*GTEGNS
Trigger: AGAATTTCCTTCAGTGCCTCAGAGATGCCTGGATGT...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTACATCCAGGCATCTCTaGGGCACTGAAGGAAATTCT +
Preference number: 2 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGTSRHL*GTEGNS
Trigger: AGAATTTCCTTCAGTGCCTCAGAGATGCCTGGATGT...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGAAGGAGCCTGTGTCTaGACTATTAATGGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGEGACV*TINGFG
Trigger: CCCAAACCCATTAATAGTTCAGACACAGGCTCCTTC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp CAGGGTGAATTCCTCCTCAGTGGTGACTTCAAAATTCCTTTGGTTTATCTGGGCCACCACTGTTGGGGCTaGGTCCTTTCCAGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: QGEFLLSGDFKIPLVYLGHHCWG*VLSRGS
Trigger: AGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTG...GCCCAGATAAACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAATTCACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
3UTR-3UTR GCA 90 bp ATCATTCAGAGTCAGATTGCTGATGCACAGGGAGTAACTCCACTTGGTGATGTCCAGAAGGACAGTAGCTaGCACAGTCCCAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: IIQSQIADAQGVTPLGDVQKDSS*HSPRWL
Trigger: CAGCCACCTGGGACTGTGGCAGCTACTGTCCTTCTG...GACATCACCAAGTGGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474998.1
3UTR CAA 90 bp AGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTaGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGT +
Preference number: 2 (lower is better)
Translates to: RRWCKGQLVQAPQQH*TSLGRISRRKRYKC
Trigger: ACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR CAA 90 bp TCCTTTCCAGAGGCTCTTAGTCCAAGGCATCTAGGAAGCTGGTATTaGGCCAAGGCAGTTAATTTTCTTGTAGGGACCCTGTGGGTGTCT +
Preference number: 2 (lower is better)
Translates to: SFPEALSPRHLGSWY*AKAVNFLVGTLWVS
Trigger: AGACACCCACAGGGTCCCTACAAGAAAATTAACTGCCTTGGCCAAATACCAGCTTCCTAGATGCCTTGGACTAAGAGCCTCTGGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490902.1
3UTR-3UTR TCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTGAAGGAGCCTGTGTCTaGACTATTAATGGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIEGACV*TINGFG
Trigger: CCCAAACCCATTAATAGTTCAGACACAGGCTCCTTC...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp GACCATAATGGTTACATTTTCTTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGACAGTCCCAGGTGGCTaGGATCCTCTCTGGGGTACT +
Preference number: 2 (lower is better)
Translates to: DHNGYIFFGTCESKSIFGTVPGG*DPLWGT
Trigger: AGTACCCCAGAGAGGATCTCAGCCACCTGGGACTGT...CCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCATTATGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474998.1
3UTR-3UTR TCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTATAAGTGTGCGAGGTaGCAAATGGGGCAAAGACAT +
Preference number: 2 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIYKCAR*QMGQRH
Trigger: ATGTCTTTGCCCCATTTGTCACCTCGCACACTTATA...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR TCA 90 bp CAGGGTGAATTCCTCCTCAGTGGTGACTTCAAAATTCCTTTGGTTTATCTGGGCTGGGACCAATCCAGATaGCGTTCTCAATCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: QGEFLLSGDFKIPLVYLGWDQSR*RSQSLC
Trigger: ACACAGAGATTGAGAACGTCATCTGGATTGGTCCCA...GCCCAGATAAACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAATTCACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
3UTR-3UTR CCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGGTGTAAAGGACAGCTaGTCCAGGCCCCTCAGCAAC +
Preference number: 2 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFGVKDS*SRPLSN
Trigger: GTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR CCA 90 bp AATAAATGGTGCATAGACGAACAGGGTGAATTCCTCCTCAGTGGTGACTTCAAAAGGCATCTAGGAAGCTaGTATTTGGCCAAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: NKWCIDEQGEFLLSGDFKRHLGS*YLAKAV
Trigger: AACTGCCTTGGCCAAATACCAGCTTCCTAGATGCCT...TTTGAAGTCACCACTGAGGAGGAATTCACCCTGTTCGTCTATGCACCATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490902.1
3UTR-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTACATCCAGGCATCTCTaGGGCACTGAAGGAAATTCT +
Preference number: 2 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFTSRHL*GTEGNS
Trigger: AGAATTTCCTTCAGTGCCTCAGAGATGCCTGGATGT...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR GCA 72 bp CCTGGCAGGGTCCCATCGGCAGGACCCTTCCAGCTCTaGTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGT +
Preference number: 3 (lower is better)
Translates to: PGRVPSAGPFQL*CAAVRWGWRSG
Trigger: ACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGTCCTGCCGATGGGACCCTGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR CCA 72 bp GCAGGACCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTaGGGATGGCGGAGCGGTCTCCAGTGGCAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: AGPFQLCCAAVR*GWRSGLQWQVG
Trigger: CCCCACCTGCCACTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGTCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR TCA 72 bp CATCGGCAGGACCCTTCCAGCTCTGCTGCGCGGCGGTaGGGTGGGGATGGCGGAGCGGTCTCCAGTGGCAGG +
Preference number: 3 (lower is better)
Translates to: HRQDPSSSAARR*GGDGGAVSSGR
Trigger: CCTGCCACTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGTCCTGCCGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR-3UTR CAA 90 bp GCCCAGGTAGCTTTTGACCATAATGGTTACATTTTCTTTGGGACGTGCGAAAGCTCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: AQVAFDHNGYIFFGTCESSLTPL*GLSPFQ
Trigger: CTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGA...GCTTTCGCACGTCCCAAAGAAAATGTAACCATTATGGTCAAAAGCTACCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
3UTR TCA 72 bp GTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTaGCCAGTCTTGGTAGAATTTCGAGGAGGAAACGCT +
Preference number: 3 (lower is better)
Translates to: VKDSWSRPLSNI*PVLVEFRGGNA
Trigger: AGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR-3UTR CAA 90 bp GCAAGAGCATTTTTGGGACCAATCCAGATGACGTTCTCAATCTCTGTGTCTACTTCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: ARAFLGPIQMTFSISVSTSLTPL*GLSPFQ
Trigger: CTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGA...AGTAGACACAGAGATTGAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
3UTR-3UTR CAA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTGAACTATTAATGGGTTaGGGAGTCCTTAAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACELLMG*GVLKGE
Trigger: CTCACCCTTAAGGACTCCCAAACCCATTAATAGTTC...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
3UTR GCA 72 bp CTCGATGACGTGGACGGACAACTTTTCAATAAATGGTaGATAGACGAACAGGGTGAATTCCTCCTCAGTGGT +
Preference number: 3 (lower is better)
Translates to: LDDVDGQLFNKW*IDEQGEFLLSG
Trigger: ACCACTGAGGAGGAATTCACCCTGTTCGTCTATGCACCATTTATTGAAAAGTTGTCCGTCCACGTCATCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490902.1
3UTR CCA 72 bp ACCCTCGATGACGTGGACGGACAACTTTTCAATAAATaGTGCATAGACGAACAGGGTGAATTCCTCCTCAGT +
Preference number: 3 (lower is better)
Translates to: TLDDVDGQLFNK*CIDEQGEFLLS
Trigger: ACTGAGGAGGAATTCACCCTGTTCGTCTATGCACCATTTATTGAAAAGTTGTCCGTCCACGTCATCGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490902.1
3UTR CCA 72 bp TTTCCAGAGGCTCTTAGTCCAAGGCATCTAGGAAGCTaGTATTTGGCCAAGGCAGTTAATTTTCTTGTAGGG +
Preference number: 3 (lower is better)
Translates to: FPEALSPRHLGS*YLAKAVNFLVG
Trigger: CCCTACAAGAAAATTAACTGCCTTGGCCAAATACCAGCTTCCTAGATGCCTTGGACTAAGAGCCTCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490902.1
3UTR-3UTR CAA 90 bp GCAAGAGCATTTTTGGGACCAATCCAGATGACGTTCTCAATCTCTGTGTCTACTCTAGGAAGCTGGTATTaGGCCAAGGCAGTTAATTTT +
Preference number: 3 (lower is better)
Translates to: ARAFLGPIQMTFSISVSTLGSWY*AKAVNF
Trigger: AAAATTAACTGCCTTGGCCAAATACCAGCTTCCTAG...AGTAGACACAGAGATTGAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490902.1
3UTR TCA 72 bp GTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATaGCGTTCTCAATCTCTGTGTCTACTGAGATGTTTA +
Preference number: 3 (lower is better)
Translates to: VRKQEHFWDQSR*RSQSLCLLRCL
Trigger: TAAACATCTCAGTAGACACAGAGATTGAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
3UTR-3UTR CAA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGAACTATTAATGGGTTaGGGAGTCCTTAAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFELLMG*GVLKGE
Trigger: CTCACCCTTAAGGACTCCCAAACCCATTAATAGTTC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp ACCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCATCTGCTGCGCGGCGGTaGGGTGGGGATGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: TLPALLRGGEVGMAERSPSAARR*GGDGGA
Trigger: CGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGA...TGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CCA 90 bp TCCGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCCGGAGCGGTCTCCAGTaGCAGGTGGGGGCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SASWVQPRTVGLHPGDPSRSGLQ*QVGARA
Trigger: GGCCCTCGCCCCCACCTGCCACTGGAGACCGCTCCG...GCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR GCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGGCCCAGCCCGGTTCCTaGGGGCGTCAGCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSAQPGS*GRQRLF
Trigger: GAAGAGCCGCTGACGCCCGCAGGAACCGGGCTGGGC...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR GCA 90 bp CCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCAGGCTCCGCATCATGGGTaGAGCCCCGCACTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PFQLCCAAVRWGWRSGLQAPHHG*SPALWA
Trigger: GGCCCACAGTGCGGGGCTGCACCCATGATGCGGAGC...CTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR GCA 90 bp ACCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCAGGACCCTTCCAGCTCTaGTGCGCGGCGGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLPALLRGGEVGMAERSPGPFQL*CAAVRW
Trigger: CCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGTCC...TGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR GCA 90 bp CCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCAGGCGGGACCCGCATGCTaGCCGAGGAGTCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PFQLCCAAVRWGWRSGLQAGPAC*PRSLCR
Trigger: CCTGCAAAGACTCCTCGGGCAGCATGCGGGTCCCGC...CTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR GCA 90 bp CGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCCCGCACTGTGGGCCTaGATCCCGGGGATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RIMGAAPHCGPASRGSQLPALWA*IPGIPA
Trigger: AGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGG...GAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGTGCAGCCCCGCACTGTaGGCCTGCATCCCGGGGATC +
Preference number: 4 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSCSPAL*ACIPGI
Trigger: GATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCA...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGCGCGGCCCGCAGGGTTaGAGGCCAGCTCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSRGPQG*RPAPHH
Trigger: ATGATGCGGAGCTGGCCTCCAACCCTGCGGGCCGCG...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR GCA 90 bp CCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCAGGAAATGGGTGCAGTGTaGGGGACCCGCATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PFQLCCAAVRWGWRSGLQEMGAV*GTRMLP
Trigger: GGGCAGCATGCGGGTCCCGCACACTGCACCCATTTC...CTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR GCA 90 bp TCCGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCCAAACACTGAGTTGGTaGCTGGCGCGGCCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SASWVQPRTVGLHPGDPSQTLSW*LARPAG
Trigger: CCCTGCGGGCCGCGCCAGGCACCAACTCAGTGTTTG...GCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CCA 90 bp CGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCGCCAGCTCCGCATCATaGGTGCAGCCCCGCACTGTG +
Preference number: 4 (lower is better)
Translates to: RIMGAAPHCGPASRGSQLASSAS*VQPRTV
Trigger: CACAGTGCGGGGCTGCACCCATGATGCGGAGCTGGC...GAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR GCA 90 bp CCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCAGATGGCCTCCCGCGCCTaGAGGGGACATCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PFQLCCAAVRWGWRSGLQMASRA*RGHPGN
Trigger: ATTTCCTGGATGTCCCCTGCAGGCGCGGGAGGCCAT...CTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR GCA 90 bp CCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCAGCATCCAGGAAATGGGTaGAGTGTGCGGGACCCGCAT +
Preference number: 4 (lower is better)
Translates to: PFQLCCAAVRWGWRSGLQHPGNG*SVRDPH
Trigger: ATGCGGGTCCCGCACACTGCACCCATTTCCTGGATG...CTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp ACCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCACACCACTGTTGGGGCTaGGTCCTTTCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TLPALLRGGEVGMAERSPHHCWG*VLSRGS
Trigger: AGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTG...TGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGAACACTGACAAACACTaGGTTGGTGCCTGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSNTDKH*VGAWRG
Trigger: GCCGCGCCAGGCACCAACTCAGTGTTTGTCAGTGTT...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp ACCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCAGCCCAGTCATCTGTGTaGCTCTTTGGTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: TLPALLRGGEVGMAERSPAQSSV*LFGATM
Trigger: CATGGTGGCACCAAAGAGTCACACAGATGACTGGGC...TGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp CGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCAGGCTCTTAGTCCCATaGGCAGGAAGAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RIMGAAPHCGPASRGSQLRLLVP*AGRGER
Trigger: CCTCTCTCCTCTTCCTGCTCATGGGACTAAGAGCCT...GAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGGGTGGTCACCCTCGATaGCGTGGACGGACAACTTTT +
Preference number: 4 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSGGHPR*RGRTTF
Trigger: AAAAGTTGTCCGTCCACGTCATCGAGGGTGACCACC...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp CGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCAGTAACTCCACTTGGTaGTGTCTAGTCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RIMGAAPHCGPASRGSQLSNSTW*CLVGPG
Trigger: ACCTGGGCCGACTAGACATCACCAAGTGGAGTTACT...GAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp CCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCAGTCAGAGTCAGATTGCTaGTGCACAGGGAGTAACTCC +
Preference number: 4 (lower is better)
Translates to: PFQLCCAAVRWGWRSGLQSESDC*CTGSNS
Trigger: GGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGA...CTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGTGCAAGTGGCAGGGTaGCTGGCTCTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKVQVAG*LALPGP
Trigger: GGGTCCTGGGAGAGCCAGTCACCCTGCCACTTGCAC...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAACCGGCAGGCTGGGAGTaGAAGTGGCAGGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEPAGWE*KWQGDW
Trigger: CCAGTCACCCTGCCACTTGCACTCCCAGCCTGCCGG...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTTGGCCCTCAGGGGCTaGGTCATGTCCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKLALRG*VMSSAL
Trigger: GAGGGCGCTGGACATGACCCAGCCCCTGAGGGCCAA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGGGGAGCTTCTCTGGCTaGCGGGGTTCTGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLGSFSG*RGSGLC
Trigger: GCACAGCCCAGAACCCCGTCAGCCAGAGAAGCTCCC...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGGTGGGAACTCCTGCTaGCAGGGTTGCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKGGNSC*QGCWLC
Trigger: GCACAGCCAGCAACCCTGTCAGCAGGAGTTCCCACC...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAGAGCCCCAGGCCCCATaGGGTCCAGCTGACTTTCCA +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEEPQAP*GPADFP
Trigger: TGGAAAGTCAGCTGGACCTCATGGGGCCTGGGGCTC...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGCCGGCAGGCTGGGAGTaGAAGTGGCAGGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLPAGWE*KWQGDW
Trigger: CCAGTCACCCTGCCACTTGCACTCCCAGCCTGCCGG...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAGTGGGTGTAGGCTGTTaGCTGGCAGGCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEVGVGC*LAGLRG
Trigger: TCCCCTCAGGCCTGCCAGGCAACAGCCTACACCCAC...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TCCGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCGAGAATATTTGCAGCTaGCTCCTCTGTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: SASWVQPRTVGLHPGDPSENICS*LLCGLL
Trigger: CAGTAAGCCACAGAGGAGTCAGCTGCAAATATTCTC...GCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp CGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCTGGGACCAATCCAGATaGCGTTCTCAATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RIMGAAPHCGPASRGSQLWDQSR*RSQSLC
Trigger: ACACAGAGATTGAGAACGTCATCTGGATTGGTCCCA...GAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAACGGAGCAGGTCAGGCTaGTCCTGCAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKERSRSG*SCRCHP
Trigger: AGGATGGCATCTGCAGGATCAGCCTGACCTGCTCCG...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR GCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGGTGGGTGTAGGCTGTTaGCTGGCAGGCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLVGVGC*LAGLRG
Trigger: TCCCCTCAGGCCTGCCAGGCAACAGCCTACACCCAC...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAAAGTGGCAGGGTGACTaGCTCTCCCAGGACCCCTAC +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEKWQGD*LSQDPY
Trigger: GTAGGGGTCCTGGGAGAGCCAGTCACCCTGCCACTT...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGGGCTGGGAGTGCAAGTaGCAGGGTGACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLGWECK*QGDWLS
Trigger: GGAGAGCCAGTCACCCTGCCACTTGCACTCCCAGCC...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTTCAGGGAGCAGTCCTaGCTGGAGACCCACACCCTG +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKFREQS*LETHTL
Trigger: CAGGGTGTGGGTCTCCAGCCAGGACTGCTCCCTGAA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTCCTGGTGTATCCGCTaGGGCCTCAGCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKSWCIR*GLSLAG
Trigger: TCCAGCCAAGCTGAGGCCCCAGCGGATACACCAGGA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAATGTCCAGCGCCCTCCTaGGTGACCTGGTCAAATACC +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKECPAPS*VTWSNT
Trigger: GGTATTTGACCAGGTCACTCAGGAGGGCGCTGGACA...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGGTGGGTGTAGGCTGTTaGCTGGCAGGCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQVGVGC*LAGLRG
Trigger: TCCCCTCAGGCCTGCCAGGCAACAGCCTACACCCAC...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGGGAGGGAGCTTCTCTaGCTGACGGGGTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEGRELL*LTGFWA
Trigger: AGCCCAGAACCCCGTCAGCCAGAGAAGCTCCCTCCC...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAATTCTGGTGTATCCGCTaGGGCCTCAGCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEFWCIR*GLSLAG
Trigger: TCCAGCCAAGCTGAGGCCCCAGCGGATACACCAGAA...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR CCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGGTGTAAAGGACAGCTaGTCCAGGCCCCTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKGVKDS*SRPLSN
Trigger: GTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACC...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TCCGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCACCCTCGATGACGTaGACGGACAACTTTTCAATA +
Preference number: 4 (lower is better)
Translates to: SASWVQPRTVGLHPGDPSSPSMT*TDNFSI
Trigger: TATTGAAAAGTTGTCCGTCCACGTCATCGAGGGTGA...GCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAGCCCAGTCATCTGTGTaGCTCTTTGGTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEAQSSV*LFGATM
Trigger: CATGGTGGCACCAAAGAGTCACACAGATGACTGGGC...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGATTCCTCCTCAGTGGTaGCTTCAAAATTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSIPPQW*LQNSFG
Trigger: ACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAAT...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTCACAGACTTCATGGTaGCTTGGGGCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKSQTSW*LGAPAA
Trigger: AGCTGCAGGAGCCCCAAGTCACCATGAAGTCTGTGA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGTGCAAGTGGCAGGGTaGCTGGCTCTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRVQVAG*LALPGP
Trigger: GGGTCCTGGGAGAGCCAGTCACCCTGCCACTTGCAC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGACGCTGGAGGCCTCTaGGCACACGTAGGCATGGTA +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEDAGGL*AHVGMV
Trigger: TACCATGCCTACGTGTGCTCAGAGGCCTCCAGCGTC...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAACAGCGCCCTCCTGAGTaGCCTGGTCAAATACCTCAT +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEQRPPE*PGQIPH
Trigger: ATGAGGTATTTGACCAGGTCACTCAGGAGGGCGCTG...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGCAGCGCCCTCCTGAGTaGCCTGGTCAAATACCTCAT +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKQRPPE*PGQIPH
Trigger: ATGAGGTATTTGACCAGGTCACTCAGGAGGGCGCTG...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGCCCATGAGGTCCAGCTaGCTTTCCAACCCCACGGTC +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEPMRSS*LSNPTV
Trigger: GACCGTGGGGTTGGAAAGTCAGCTGGACCTCATGGG...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGCCGGCAGGCTGGGAGTaGAAGTGGCAGGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRPAGWE*KWQGDW
Trigger: CCAGTCACCCTGCCACTTGCACTCCCAGCCTGCCGG...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAATTGGACTCAGAAGCATaGGGTTCCCTTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKELDSEA*GSLGVQ
Trigger: CTGGACCCCAAGGGAACCCCATGCTTCTGAGTCCAA...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTCCTCTGGAGGCTCCTaGATCTGTACAGAACTGCCC +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKSSGGS*ICTELP
Trigger: GGGCAGTTCTGTACAGATCCAGGAGCCTCCAGAGGA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGTTGGCCCTCAGGGGCTaGGTCATGTCCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRLALRG*VMSSAL
Trigger: GAGGGCGCTGGACATGACCCAGCCCCTGAGGGCCAA...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTTGGCCCTCAGGGGCTaGGTCATGTCCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGALALRG*VMSSAL
Trigger: GAGGGCGCTGGACATGACCCAGCCCCTGAGGGCCAA...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCACCACTGTTGGGGCTaGGTCCTTTCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQHHCWG*VLSRGS
Trigger: AGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTG...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGAGTAACTCCACTTGGTaGTGTCTAGTCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKSNSTW*CLVGPG
Trigger: ACCTGGGCCGACTAGACATCACCAAGTGGAGTTACT...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGTCACAGACTTCATGGTaGCTTGGGGCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLSQTSW*LGAPAA
Trigger: AGCTGCAGGAGCCCCAAGTCACCATGAAGTCTGTGA...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTGGGAGCTTCTCTGGCTaGCGGGGTTCTGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACGSFSG*RGSGLC
Trigger: GCACAGCCCAGAACCCCGTCAGCCAGAGAAGCTCCC...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTGTGCAAGTGGCAGGGTaGCTGGCTCTCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACVQVAG*LALPGP
Trigger: GGGTCCTGGGAGAGCCAGTCACCCTGCCACTTGCAC...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGGGGTCCATGTGTACATaGCAGTGTTTCCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLGSMCT*QCFPRP
Trigger: AGGACGGGGGAAACACTGTCATGTACACATGGACCC...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGGTGGGAACTCCTGCTaGCAGGGTTGCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGGGNSC*QGCWLC
Trigger: GCACAGCCAGCAACCCTGTCAGCAGGAGTTCCCACC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGGTGGGAACTCCTGCTaGCAGGGTTGCTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRGGNSC*QGCWLC
Trigger: GCACAGCCAGCAACCCTGTCAGCAGGAGTTCCCACC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGACAGAAGGCTGGGACTaGACACCGTCCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKTEGWD*TPSFSL
Trigger: AAGCGAAAAGGACGGTGTTCAGTCCCAGCCTTCTGT...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGTTGCCTGGCAGGCCTaGGGGGAGTGTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGVAWQA*GECPAS
Trigger: AGAAGCTGGACACTCCCCTCAGGCCTGCCAGGCAAC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGTGTCCAGCGCCCTCCTaGGTGACCTGGTCAAATACC +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQCPAPS*VTWSNT
Trigger: GGTATTTGACCAGGTCACTCAGGAGGGCGCTGGACA...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGTGTCCAGCGCCCTCCTaGGTGACCTGGTCAAATACC +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHECPAPS*VTWSNT
Trigger: GGTATTTGACCAGGTCACTCAGGAGGGCGCTGGACA...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp ACTGTTGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTCCTGCACCATCATCCCTGCAGGAGTTGGGCCCATaGGCAGGAAGAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TVGAESFPEALSPAPSSLQELGP*AGRGER
Trigger: CCTCTCTCCTCTTCCTGCTCATGGGCCCAACTCCTG...CAGGGATGATGGTGCAGGACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR TCA 90 bp TCACGGAACCCCCTAGGATCCCTGACACCACTGTTGGGGCTGAGTCCTTTCCAGCCACCAGGAATTCCATaGGCAGGAAGAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRNPLGSLTPLLGLSPFQPPGIP*AGRGER
Trigger: CCTCTCTCCTCTTCCTGCTCATGGAATTCCTGGTGG...CTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCTAGGGGGTTCCGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR GCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGTGGGTGTAGGCTGTTaGCTGGCAGGCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGVGVGC*LAGLRG
Trigger: TCCCCTCAGGCCTGCCAGGCAACAGCCTACACCCAC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAGAGACTGAAGGAGGATaGACTTACCACAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEETEGG*TYHSFR
Trigger: GCGGAAGCTGTGGTAAGTGCATCCTCCTTCAGTCTC...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGTTTTTAGAGACCATGTaGAGTTTAATTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSFLETM*SLIVGR
Trigger: CCTCCCCACAATTAAACTGCACATGGTCTCTAAAAA...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGCAGGTCTGGGTCACATaGTGTTCGGGAGACGGTAAG +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLQVWVT*CSGDGK
Trigger: CTTACCGTCTCCCGAACACCATGTGACCCAGACCTG...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGTGGCTGACGGGGTTCTaGGCTGTGCAGATGTATGGC +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQWLTGF*AVQMYG
Trigger: GCCATACATCTGCACAGCCCAGAACCCCGTCAGCCA...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGTGGCTGACGGGGTTCTaGGCTGTGCAGATGTATGGC +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEWLTGF*AVQMYG
Trigger: GCCATACATCTGCACAGCCCAGAACCCCGTCAGCCA...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGGGAGGGAGCTTCTCTaGCTGACGGGGTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRGRELL*LTGFWA
Trigger: AGCCCAGAACCCCGTCAGCCAGAGAAGCTCCCTCCC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGGCTGGGAGTGCAAGTaGCAGGGTGACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRGWECK*QGDWLS
Trigger: GGAGAGCCAGTCACCCTGCCACTTGCACTCCCAGCC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCTGTGTCCCGGCAGGCTaGGAGTGCAAGTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQACVPAG*ECKWQG
Trigger: ACCCTGCCACTTGCACTCCCAGCCTGCCGGGACACA...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCGCCAGCTGTGGGTTCTaGTGTATCCGCTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAASCGF*CIRWGL
Trigger: GAGGCCCCAGCGGATACACCAGAACCCACAGCTGGC...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR CCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAATTCTGTTGTGGTGGTaGCACCACCTGAGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEILLWW*HHLRFP
Trigger: CGGAAACCTCAGGTGGTGCCACCACCACAACAGAAT...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
3UTR CAA 72 bp GAGTCACGGAACCCCCTAGGATCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ESRNPLGSLTPL*GLSPFQRLLVL
Trigger: CAGGACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCTAGGGGGTTCCGTGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR TCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGAGGCTCTTAGTCCCATaGGCAGGAAGAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHERLLVP*AGRGER
Trigger: CCTCTCTCCTCTTCCTGCTCATGGGACTAAGAGCCT...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TCACGGAACCCCCTAGGATCCCTGACACCACTGTTGGGGCTGAGTCCTTTCCAGAGTAACTCCACTTGGTaGTGTCTAGTCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SRNPLGSLTPLLGLSPFQSNSTW*CLVGPG
Trigger: ACCTGGGCCGACTAGACATCACCAAGTGGAGTTACT...CTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCTAGGGGGTTCCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGTCACAGACTTCATGGTaGCTTGGGGCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQSQTSW*LGAPAA
Trigger: AGCTGCAGGAGCCCCAAGTCACCATGAAGTCTGTGA...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGCTATCTTCAGCTGGCTaGTCTTCAGGGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLLSSAG*SSGSSP
Trigger: AGGACTGCTCCCTGAAGATCAGCCAGCTGAAGATAG...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCCGGAGCAGGTCAGGCTaGTCCTGCAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGARSRSG*SCRCHP
Trigger: AGGATGGCATCTGCAGGATCAGCCTGACCTGCTCCG...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTCCAAATGCACCAGCTaGAGATCCCAACGCACAGAA +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKSKCTS*RSQRTE
Trigger: TTCTGTGCGTTGGGATCTTCAGCTGGTGCATTTGGA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGGTGGTGGCACCACCTaGGGTTTCCGTATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGGGGTT*GFRMEQ
Trigger: CTGCTCCATACGGAAACCTCAGGTGGTGCCACCACC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGCCCATGAGGTCCAGCTaGCTTTCCAACCCCACGGTC +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRPMRSS*LSNPTV
Trigger: GACCGTGGGGTTGGAAAGTCAGCTGGACCTCATGGG...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTGGATCTGCCGTTGCTaGTTCTTCCCTCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKWICRC*FFPLFA
Trigger: AGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAGAGTGGATCTGCCGTTaGTGCTTCTTCCCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEEWICR*CFFPLF
Trigger: AAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTC...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGATGCCATCCTCACTGTaGCTGAGGCTCCACGTGATT +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLMPSSL*LRLHVI
Trigger: AATCACGTGGAGCCTCAGGCACAGTGAGGATGGCAT...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR GCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGACAACAGCTTCCTTCTaGAGCGGGGTCCATGTGTAC +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLTTASF*SGVHVY
Trigger: GTACACATGGACCCCGCTGCAGAAGGAAGCTGTTGT...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGTCCTCTGGAGGCTCCTaGATCTGTACAGAACTGCCC +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQSSGGS*ICTELP
Trigger: GGGCAGTTCTGTACAGATCCAGGAGCCTCCAGAGGA...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCAAGTGGCAGGGTGACTaGCTCTCCCAGGACCCCTAC +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAKWQGD*LSQDPY
Trigger: GTAGGGGTCCTGGGAGAGCCAGTCACCCTGCCACTT...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAAGTGGCAGGGTGACTaGCTCTCCCAGGACCCCTAC +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGKWQGD*LSQDPY
Trigger: GTAGGGGTCCTGGGAGAGCCAGTCACCCTGCCACTT...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAGGCTGGGAGTGCAAGTaGCAGGGTGACTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRGWECK*QGDWLS
Trigger: GGAGAGCCAGTCACCCTGCCACTTGCACTCCCAGCC...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTTGTGTCCCGGCAGGCTaGGAGTGCAAGTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACCVPAG*ECKWQG
Trigger: ACCCTGCCACTTGCACTCCCAGCCTGCCGGGACACA...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGGGAGCAGTCCTGGCTaGAGACCCACACCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGGSSPG*RPTPCS
Trigger: AGAACAGGGTGTGGGTCTCCAGCCAGGACTGCTCCC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGTTCAGGGAGCAGTCCTaGCTGGAGACCCACACCCTG +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRFREQS*LETHTL
Trigger: CAGGGTGTGGGTCTCCAGCCAGGACTGCTCCCTGAA...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCAACTTTTCAATAAATaGTGCATAGACGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: RIMGAAPHCGPASRGSQLQLFNK*CIDEQG
Trigger: ACCCTGTTCGTCTATGCACCATTTATTGAAAAGTTG...GAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
3UTR CAA 72 bp GAGTCACGGAACCCCCTAGGATCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: ESRNPLGSLTPL*GLSPFQRLLVQ
Trigger: TTGGACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCTAGGGGGTTCCGTGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR TCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAGAGAATATTTGCAGCTaGCTCCTCTGTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEENICS*LLCGLL
Trigger: CAGTAAGCCACAGAGGAGTCAGCTGCAAATATTCTC...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTCACCACTGTTGGGGCTaGGTCCTTTCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGHHCWG*VLSRGS
Trigger: AGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTG...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAATGGGACCAATCCAGATaGCGTTCTCAATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEWDQSR*RSQSLC
Trigger: ACACAGAGATTGAGAACGTCATCTGGATTGGTCCCA...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGAGTAACTCCACTTGGTaGTGTCTAGTCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQSNSTW*CLVGPG
Trigger: ACCTGGGCCGACTAGACATCACCAAGTGGAGTTACT...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGTCAGAGTCAGATTGCTaGTGCACAGGGAGTAACTCC +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLSESDC*CTGSNS
Trigger: GGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGA...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTATCTTCAGCTGGCTaGTCTTCAGGGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQLSSAG*SSGSSP
Trigger: AGGACTGCTCCCTGAAGATCAGCCAGCTGAAGATAG...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGCTATCTTCAGCTGGCTaGTCTTCAGGGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHELSSAG*SSGSSP
Trigger: AGGACTGCTCCCTGAAGATCAGCCAGCTGAAGATAG...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAGACGCTGGAGGCCTCTaGGCACACGTAGGCATGGTA +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRDAGGL*AHVGMV
Trigger: TACCATGCCTACGTGTGCTCAGAGGCCTCCAGCGTC...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGACAGAAGGCTGGGACTaGACACCGTCCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQTEGWD*TPSFSL
Trigger: AAGCGAAAAGGACGGTGTTCAGTCCCAGCCTTCTGT...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGTCAGAGCTGCTGTCTaGGGTGGGTGTAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGVRAAV*GGCRLL
Trigger: CAACAGCCTACACCCACCTCAGACAGCAGCTCTGAC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGTCAGAGCTGCTGTCTaGGGTGGGTGTAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRVRAAV*GGCRLL
Trigger: CAACAGCCTACACCCACCTCAGACAGCAGCTCTGAC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCCTCATATCTTCCACTaGTGGGCTTGTGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQPHIFH*WACAPQ
Trigger: CTGAGGTGCACAAGCCCATCAGTGGAAGATATGAGG...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGTGTCCAGCGCCCTCCTaGGTGACCTGGTCAAATACC +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRCPAPS*VTWSNT
Trigger: GGTATTTGACCAGGTCACTCAGGAGGGCGCTGGACA...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGAGCTCTCTTCCTTCTaGGAAACTGGGGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEELSSF*ETGVFP
Trigger: GGGAAAGACCCCAGTTTCTCAGAAGGAAGAGAGCTC...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAGAAGGAGCCTGTGTCTaGACTATTAATGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEEGACV*TINGFG
Trigger: CCCAAACCCATTAATAGTTCAGACACAGGCTCCTTC...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGCCACTGATGGGCTTGTaGACCTCAGGCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRPLMGL*TSGLSS
Trigger: TGAGGACAGGCCTGAGGTGCACAAGCCCATCAGTGG...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGATGTATGGCAGGTCTaGGTCACATGGTGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEDVWQV*VTWCSG
Trigger: TCCCGAACACCATGTGACCCAGACCTGCCATACATC...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTGGGAGCAGTCCTGGCTaGAGACCCACACCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACGSSPG*RPTPCS
Trigger: AGAACAGGGTGTGGGTCTCCAGCCAGGACTGCTCCC...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTGCCAGCTGTGGGTTCTaGTGTATCCGCTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIASCGF*CIRWGL
Trigger: GAGGCCCCAGCGGATACACCAGAACCCACAGCTGGC...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR CCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTGCGTGTGGCCAGCTGTaGGTTCTGGTGTATCCGCTG +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACACGQL*VLVYPL
Trigger: CAGCGGATACACCAGAACCCACAGCTGGCCACACGC...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR CCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGATTCTGTTGTGGTGGTaGCACCACCTGAGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQILLWW*HHLRFP
Trigger: CGGAAACCTCAGGTGGTGCCACCACCACAACAGAAT...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGGCAGTGTTGAGAAGGTaGTGTAAAGGACAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLAVLRR*CKGQLV
Trigger: GACCAGCTGTCCTTTACACCACCTTCTCAACACTGC...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGACAACTTTTCAATAAATGGTGCATAGACGAACAGGGTGAATTCCTCCTCAGTCGGAGCGGTCTCCAGTaGCAGGTGGGGGCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GQLFNKWCIDEQGEFLLSRSGLQ*QVGARA
Trigger: GGCCCTCGCCCCCACCTGCCACTGGAGACCGCTCCG...ACTGAGGAGGAATTCACCCTGTTCGTCTATGCACCATTTATTGAAAAGTTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR CCA 90 bp CCTAGGATCCCTGACACCACTGTTGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTTCATCCCTGAAGCCCTaGAGAAAGCGGGAGCACAGA +
Preference number: 4 (lower is better)
Translates to: PRIPDTTVGAESFPEALSSSLKP*RKREHR
Trigger: TCTGTGCTCCCGCTTTCTCCAGGGCTTCAGGGATGA...ACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCGCCCAGTCATCTGTGTaGCTCTTTGGTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAAQSSV*LFGATM
Trigger: CATGGTGGCACCAAAGAGTCACACAGATGACTGGGC...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCAGGCTCTTAGTCCCATaGGCAGGAAGAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGARLLVP*AGRGER
Trigger: CCTCTCTCCTCTTCCTGCTCATGGGACTAAGAGCCT...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTCACCACTGTTGGGGCTaGGTCCTTTCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACHHCWG*VLSRGS
Trigger: AGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTG...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTCGGAGCAGGTCAGGCTaGTCCTGCAGATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIRSRSG*SCRCHP
Trigger: AGGATGGCATCTGCAGGATCAGCCTGACCTGCTCCG...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGTTCTCCATGAGACATTaGGGTGTGATTCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQFSMRH*GVIPLG
Trigger: CCCAAGGGGAATCACACCTCAATGTCTCATGGAGAA...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGCATGTGAGGTTGGGGTaGTTTTCACTGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLHVRLG*FSLLLH
Trigger: ATGGAGAAGCAGTGAAAATCACCCCAACCTCACATG...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAGTCAGAGCTGCTGTCTaGGGTGGGTGTAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRVRAAV*GGCRLL
Trigger: CAACAGCCTACACCCACCTCAGACAGCAGCTCTGAC...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTCAGCGCCCTCCTGAGTaGCCTGGTCAAATACCTCAT +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGQRPPE*PGQIPH
Trigger: ATGAGGTATTTGACCAGGTCACTCAGGAGGGCGCTG...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTATAAGTGTGCGAGGTaGCAAATGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKYKCAR*QMGQRH
Trigger: ATGTCTTTGCCCCATTTGTCACCTCGCACACTTATA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGCCCCTCAGCAACATTTaGCCAGTCTTGGTAGAATTT +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKPLSNI*PVLVEF
Trigger: AAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGG...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTCTTTTCAGCAGTGTTaGGAAGGTGGTGTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKSFQQC*EGGVKD
Trigger: GTCCTTTACACCACCTTCTCAACACTGCTGAAAAGA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGAGTGGATCTGCCGTTaGTGCTTCTTCCCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEEWICR*CFFPLF
Trigger: AAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTC...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCAGCATGGGGTTCCCTTaGGGTCCAGCTGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQASMGFP*GPAVQN
Trigger: GTTCTGTACAGCTGGACCCCAAGGGAACCCCATGCT...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCAGCATGGGGTTCCCTTaGGGTCCAGCTGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGASMGFP*GPAVQN
Trigger: GTTCTGTACAGCTGGACCCCAAGGGAACCCCATGCT...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCTTGGACTCAGAAGCATaGGGTTCCCTTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQALDSEA*GSLGVQ
Trigger: CTGGACCCCAAGGGAACCCCATGCTTCTGAGTCCAA...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGCAGGTCTGGGTCACATaGTGTTCGGGAGACGGTAAG +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRQVWVT*CSGDGK
Trigger: CTTACCGTCTCCCGAACACCATGTGACCCAGACCTG...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGGCTGTGCAGATGTATaGCAGGTCTGGGTCACATGG +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGGCADV*QVWVTW
Trigger: CCATGTGACCCAGACCTGCCATACATCTGCACAGCC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCGGCTGTGCAGATGTATaGCAGGTCTGGGTCACATGG +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAGCADV*QVWVTW
Trigger: CCATGTGACCCAGACCTGCCATACATCTGCACAGCC...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTTGGCTGACGGGGTTCTaGGCTGTGCAGATGTATGGC +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACWLTGF*AVQMYG
Trigger: GCCATACATCTGCACAGCCCAGAACCCCGTCAGCCA...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATGGGAGGGAGCTTCTCTaGCTGACGGGGTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYGRELL*LTGFWA
Trigger: AGCCCAGAACCCCGTCAGCCAGAGAAGCTCCCTCCC...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCCCGTTGTTCCTCCTCTaGAGGCTCCTGGATCTGTAC +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAPLFLL*RLLDLY
Trigger: GTACAGATCCAGGAGCCTCCAGAGGAGGAACAACGG...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCCCGTTGTTCCTCCTCTaGAGGCTCCTGGATCTGTAC +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAPLFLL*RLLDLY
Trigger: GTACAGATCCAGGAGCCTCCAGAGGAGGAACAACGG...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATTGTGTCCCGGCAGGCTaGGAGTGCAAGTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYCVPAG*ECKWQG
Trigger: ACCCTGCCACTTGCACTCCCAGCCTGCCGGGACACA...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGAAGATCATTCTGTTGTaGTGGTGGCACCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEKIILL*WWHHLR
Trigger: CCTCAGGTGGTGCCACCACCACAACAGAATGATCTT...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAGGTGTAAAGGACAGCTaGTCCAGGCCCCTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRGVKDS*SRPLSN
Trigger: GTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACC...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTGGTGTAAAGGACAGCTaGTCCAGGCCCCTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACGVKDS*SRPLSN
Trigger: GTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACC...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCCTGGTGTATCCGCTaGGGCCTCAGCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRISWCIR*GLSLAG
Trigger: TCCAGCCAAGCTGAGGCCCCAGCGGATACACCAGGA...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCCAGCTTCTCATATCCTaGTGTATCCGCTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAQLLIS*CIRWGL
Trigger: GAGGCCCCAGCGGATACACCAGGATATGAGAAGCTG...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGATTCCTCCTCAGTGGTaGCTTCAAAATTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKIPPQW*LQNSFG
Trigger: ACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAAT...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAATTCCTCCTCAGTGGTaGCTTCAAAATTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GEKEGEGPHPGISEALKEIPPQW*LQNSFG
Trigger: ACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAAT...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGCTGGCTGTGCATGTaGGGTTGGGGTGATTTTCAC +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGACWLCM*GWGDFH
Trigger: GTGAAAATCACCCCAACCTCACATGCACAGCCAGCA...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCTGCTGGCTGTGCATGTaGGGTTGGGGTGATTTTCAC +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQACWLCM*GWGDFH
Trigger: GTGAAAATCACCCCAACCTCACATGCACAGCCAGCA...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCACAGAAGGCTGGGACTaGACACCGTCCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGATEGWD*TPSFSL
Trigger: AAGCGAAAAGGACGGTGTTCAGTCCCAGCCTTCTGT...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGACAGAAGGCTGGGACTaGACACCGTCCTTTTCGCTT +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRTEGWD*TPSFSL
Trigger: AAGCGAAAAGGACGGTGTTCAGTCCCAGCCTTCTGT...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGCCTCATATCTTCCACTaGTGGGCTTGTGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRPHIFH*WACAPQ
Trigger: CTGAGGTGCACAAGCCCATCAGTGGAAGATATGAGG...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGAGCTCTCTTCCTTCTaGGAAACTGGGGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRELSSF*ETGVFP
Trigger: GGGAAAGACCCCAGTTTCTCAGAAGGAAGAGAGCTC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATGGTGGTGGCACCACCTaGGGTTTCCGTATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYGGGTT*GFRMEQ
Trigger: CTGCTCCATACGGAAACCTCAGGTGGTGCCACCACC...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCATGCCATCCTCACTGTaGCTGAGGCTCCACGTGATT +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAMPSSL*LRLHVI
Trigger: AATCACGTGGAGCCTCAGGCACAGTGAGGATGGCAT...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR GCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCACAACAGCTTCCTTCTaGAGCGGGGTCCATGTGTAC +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQATTASF*SGVHVY
Trigger: GTACACATGGACCCCGCTGCAGAAGGAAGCTGTTGT...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR GCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTCCACTGATGGGCTTGTaGACCTCAGGCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIPLMGL*TSGLSS
Trigger: TGAGGACAGGCCTGAGGTGCACAAGCCCATCAGTGG...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGAGAGAGGCAGCAGCTaGTTTTCCTTTCAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEERGSS*FSFQVK
Trigger: TTTCACCTGAAAGGAAAAGCAGCTGCTGCCTCTCTC...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp TTCTCAATCTCTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCCTCAGAAGGACAGTAGCTaGCACAGTCCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FSISVSTEMFRGRVTEPPQKDSS*HSPRWL
Trigger: CAGCCACCTGGGACTGTGGCAGCTACTGTCCTTCTG...AGGGGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGATCTGTGTGACTCTTTaGTGCCACCATGATGATCTA +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKICVTL*CHHDDL
Trigger: TAGATCATCATGGTGGCACCAAAGAGTCACACAGAT...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GCACAGAAGGACAGTAGCTGCCACAGTCCCAGGTGGCTGAGATCCTCTCTGGGGATCTGTGTGACTCTTTaGTGCCACCATGATGATCTA +
Preference number: 4 (lower is better)
Translates to: AQKDSSCHSPRWLRSSLGICVTL*CHHDDL
Trigger: TAGATCATCATGGTGGCACCAAAGAGTCACACAGAT...CCCCAGAGAGGATCTCAGCCACCTGGGACTGTGGCAGCTACTGTCCTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CCA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGTGGTTACATTTTCTTTaGGACGTGCGAAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KGEKEGEGPHPGISEALKWLHFL*DVRKQE
Trigger: CTCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCA...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTTTGGACTCAGAAGCATaGGGTTCCCTTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACLDSEA*GSLGVQ
Trigger: CTGGACCCCAAGGGAACCCCATGCTTCTGAGTCCAA...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGATGTATGGCAGGTCTaGGTCACATGGTGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRDVWQV*VTWCSG
Trigger: TCCCGAACACCATGTGACCCAGACCTGCCATACATC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGATCCTCTGGAGGCTCCTaGATCTGTACAGAACTGCCC +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRSSGGS*ICTELP
Trigger: GGGCAGTTCTGTACAGATCCAGGAGCCTCCAGAGGA...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATGGGAGCAGTCCTGGCTaGAGACCCACACCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYGSSPG*RPTPCS
Trigger: AGAACAGGGTGTGGGTCTCCAGCCAGGACTGCTCCC...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTTCTGGTGTATCCGCTaGGGCCTCAGCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIFWCIR*GLSLAG
Trigger: TCCAGCCAAGCTGAGGCCCCAGCGGATACACCAGAA...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR CCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGATCATTCTGTTGTGGTaGTGGCACCACCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQIILLW*WHHLRF
Trigger: AAACCTCAGGTGGTGCCACCACCACAACAGAATGAT...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTGGTGTAAAGGACAGCTaGTCCAGGCCCCTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIGVKDS*SRPLSN
Trigger: GTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACC...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTAGGATCCTGCATCATTCAGAGTCAGATTGCTGATGCACAGGGAGTAACTCCACTATCTGCTGGACAGTaGGGTTCCGGGCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: VGSCIIQSQIADAQGVTPLSAGQ*GSGPCS
Trigger: GCTGCATGGCCCGGAACCCCACTGTCCAGCAGATAG...TGGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGAATGATGCAGGATCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CCA 90 bp CCTAGGATCCCTGACACCACTGTTGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTTCTGGGGTACTGGATTaGCTCTATCTGCTGGACAGT +
Preference number: 4 (lower is better)
Translates to: PRIPDTTVGAESFPEALSSGVLD*LYLLDS
Trigger: ACTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGA...ACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
3UTR CAA 72 bp TCCAAGAAGGAGCCTGTGTCTGAACTATTAATGGGTTaGGGAGTCCTTAAGGGTGAGAAGGAGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SKKEPVSELLMG*GVLKGEKEGEG
Trigger: CCCCTCCCCCTCCTTCTCACCCTTAAGGACTCCCAAACCCATTAATAGTTCAGACACAGGCTCCTTCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TCTCAATCTCTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCCTAGCCCAGTCATCTGTGTaGCTCTTTGGTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: SQSLCLLRCLGGESRNPLAQSSV*LFGATM
Trigger: CATGGTGGCACCAAAGAGTCACACAGATGACTGGGC...TAGGGGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR TCA 90 bp CTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCCTAGGATCCCTGGAGAATATTTGCAGCTaGCTCCTCTGTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: LCLLRCLGGESRNPLGSLENICS*LLCGLL
Trigger: CAGTAAGCCACAGAGGAGTCAGCTGCAAATATTCTC...CAGGGATCCTAGGGGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTAGGCTCTTAGTCCCATaGGCAGGAAGAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIRLLVP*AGRGER
Trigger: CCTCTCTCCTCTTCCTGCTCATGGGACTAAGAGCCT...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTTCTCCATGAGACATTaGGGTGTGATTCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAFSMRH*GVIPLG
Trigger: CCCAAGGGGAATCACACCTCAATGTCTCATGGAGAA...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTCCAAATGCACCAGCTaGAGATCCCAACGCACAGAA +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGASKCTS*RSQRTE
Trigger: TTCTGTGCGTTGGGATCTTCAGCTGGTGCATTTGGA...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGGTTGCCTGGCAGGCCTaGGGGGAGTGTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAVAWQA*GECPAS
Trigger: AGAAGCTGGACACTCCCCTCAGGCCTGCCAGGCAAC...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTCCTCATATCTTCCACTaGTGGGCTTGTGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACPHIFH*WACAPQ
Trigger: CTGAGGTGCACAAGCCCATCAGTGGAAGATATGAGG...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCGCAGTAGATTGTGGCTaGGCTCTCTTCCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAAVDCG*ALFLLR
Trigger: TCTCAGAAGGAAGAGAGCTCAGCCACAATCTACTGC...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGCCCCTCAGCAACATTTaGCCAGTCTTGGTAGAATTT +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEPLSNI*PVLVEF
Trigger: AAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGG...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGTCTTTTCAGCAGTGTTaGGAAGGTGGTGTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHESFQQC*EGGVKD
Trigger: GTCCTTTACACCACCTTCTCAACACTGCTGAAAAGA...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGCAGAACACTTTTCTCTaGCCCCTTCACGGAGCACAT +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRQNTFL*PLHGAH
Trigger: ATGTGCTCCGTGAAGGGGGCAGAGAAAAGTGTTCTG...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGTGGATCTGCCGTTGCTaGTTCTTCCCTCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRWICRC*FFPLFA
Trigger: AGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCA...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGAGTGGATCTGCCGTTaGTGCTTCTTCCCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGEWICR*CFFPLF
Trigger: AAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp ATCATTCAGAGTCAGATTGCTGATGCACAGGGAGTAACTCCACTTGGTGATGTCTGGGGTTCCGGGCCATaGAGCGGAGAGATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: IIQSQIADAQGVTPLGDVWGSGP*SGEMFP
Trigger: GGGAAACATCTCTCCGCTGCATGGCCCGGAACCCCA...GACATCACCAAGTGGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGAATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CCA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGTGGTTACATTTTCTTTaGGACGTGCGAAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLWLHFL*DVRKQE
Trigger: CTCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCA...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCGAATGGAGCCTCCATTaGACTCAGAAGCATGGGGTT +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAEWSLH*TQKHGV
Trigger: AACCCCATGCTTCTGAGTCCAATGGAGGCTCCATTC...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAGATGTATGGCAGGTCTaGGTCACATGGTGTTCGGGA +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRDVWQV*VTWCSG
Trigger: TCCCGAACACCATGTGACCCAGACCTGCCATACATC...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTGGCTGTGCAGATGTATaGCAGGTCTGGGTCACATGG +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIGCADV*QVWVTW
Trigger: CCATGTGACCCAGACCTGCCATACATCTGCACAGCC...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGTCCTCTATCTTCAGCTaGCTGATCTTCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRSSIFS*LIFREQ
Trigger: CTGCTCCCTGAAGATCAGCCAGCTGAAGATAGAGGA...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGGTGTGATTCCCCTTaGGACACAACAGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGRCDSP*DTTASF
Trigger: GAAGGAAGCTGTTGTGTCCCAAGGGGAATCACACCT...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTTCAGAAAGAAACTGGTaGGAACTCCTGCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGSERNW*ELLLTG
Trigger: CCCTGTCAGCAGGAGTTCCCACCAGTTTCTTTCTGA...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGTTCTCAGAAAGAAACTaGTGGGAACTCCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEFSERN*WELLLT
Trigger: TGTCAGCAGGAGTTCCCACCAGTTTCTTTCTGAGAA...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAACAGAGTATAGCGTGTaGCCAGCTGTGGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRTEYSV*PAVGSG
Trigger: ACCAGAACCCACAGCTGGCCACACGCTATACTCTGT...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR CCA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGAGCTTCTCATATCCTTaGGAGAGCACAGAGTATAGC +
Preference number: 4 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQSFSYP*ESTEYS
Trigger: GCTATACTCTGTGCTCTCCCAAGGATATGAGAAGCT...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR CCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGAACTTCCGTGACATATaGAGTGACGGGATCATAGTC +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHENFRDI*SDGIIV
Trigger: GACTATGATCCCGTCACTCCATATGTCACGGAAGTT...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCGCAGTGTTGAGAAGGTaGTGTAAAGGACAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAAVLRR*CKGQLV
Trigger: GACCAGCTGTCCTTTACACCACCTTCTCAACACTGC...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTCAGCTTCTCATATCCTaGTGTATCCGCTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIQLLIS*CIRWGL
Trigger: GAGGCCCCAGCGGATACACCAGGATATGAGAAGCTG...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGAGAATATTTGCAGCTaGCTCCTCTGTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRENICS*LLCGLL
Trigger: CAGTAAGCCACAGAGGAGTCAGCTGCAAATATTCTC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp ATCATTCAGAGTCAGATTGCTGATGCACAGGGAGTAACTCCACTTGGTGATGTCCACCACTGTTGGGGCTaGGTCCTTTCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: IIQSQIADAQGVTPLGDVHHCWG*VLSRGS
Trigger: AGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTG...GACATCACCAAGTGGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGAATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTTGGGACCAATCCAGATaGCGTTCTCAATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGWDQSR*RSQSLC
Trigger: ACACAGAGATTGAGAACGTCATCTGGATTGGTCCCA...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTTCAGAGTCAGATTGCTaGTGCACAGGGAGTAACTCC +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACSESDC*CTGSNS
Trigger: GGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGA...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATGGGTCCATGTGTACATaGCAGTGTTTCCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYGSMCT*QCFPRP
Trigger: AGGACGGGGGAAACACTGTCATGTACACATGGACCC...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGATTCTCCATGAGACATTaGGGTGTGATTCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRFSMRH*GVIPLG
Trigger: CCCAAGGGGAATCACACCTCAATGTCTCATGGAGAA...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGATCCAAATGCACCAGCTaGAGATCCCAACGCACAGAA +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRSKCTS*RSQRTE
Trigger: TTCTGTGCGTTGGGATCTTCAGCTGGTGCATTTGGA...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTCCTCATATCTTCCACTaGTGGGCTTGTGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIPHIFH*WACAPQ
Trigger: CTGAGGTGCACAAGCCCATCAGTGGAAGATATGAGG...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGGGTGGTGGCACCACCTaGGGTTTCCGTATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAGGGTT*GFRMEQ
Trigger: CTGCTCCATACGGAAACCTCAGGTGGTGCCACCACC...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCGAAGGAGCCTGTGTCTaGACTATTAATGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAEGACV*TINGFG
Trigger: CCCAAACCCATTAATAGTTCAGACACAGGCTCCTTC...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATGACGTTCTCGGTGGTCACCCTCGATaGCGTGGACGGACAACTTTT +
Preference number: 4 (lower is better)
Translates to: FGTCESKSIFGTNPDDVLGGHPR*RGRTTF
Trigger: AAAAGTTGTCCGTCCACGTCATCGAGGGTGACCACC...GAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR GCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTCAGAACACTTTTCTCTaGCCCCTTCACGGAGCACAT +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACQNTFL*PLHGAH
Trigger: ATGTGCTCCGTGAAGGGGGCAGAGAAAAGTGTTCTG...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTATGCCATCCTCACTGTaGCTGAGGCTCCACGTGATT +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIMPSSL*LRLHVI
Trigger: AATCACGTGGAGCCTCAGGCACAGTGAGGATGGCAT...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR GCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCGAGAGAGGCAGCAGCTaGTTTTCCTTTCAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAERGSS*FSFQVK
Trigger: TTTCACCTGAAAGGAAAAGCAGCTGCTGCCTCTCTC...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATGACGTTCTCAATCTGGATTGGCTCTATCTaGTGGACAGTGGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GRAKARAFLGPIQMTFSIWIGSI*WTVGFR
Trigger: CCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCA...GATTGAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATCCGTTGTTCCTCCTCTaGAGGCTCCTGGATCTGTAC +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYPLFLL*RLLDLY
Trigger: GTACAGATCCAGGAGCCTCCAGAGGAGGAACAACGG...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGATCCTCTATCTTCAGCTaGCTGATCTTCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRSSIFS*LIFREQ
Trigger: CTGCTCCCTGAAGATCAGCCAGCTGAAGATAGAGGA...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTAAGATCATTCTGTTGTaGTGGTGGCACCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACKIILL*WWHHLR
Trigger: CCTCAGGTGGTGCCACCACCACAACAGAATGATCTT...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTGCAGTGTTGAGAAGGTaGTGTAAAGGACAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACAVLRR*CKGQLV
Trigger: GACCAGCTGTCCTTTACACCACCTTCTCAACACTGC...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TTCTCAATCTCTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCCTCCTGTGGGTGTCTTCTaGGTGACCCTAGCTTGGATT +
Preference number: 4 (lower is better)
Translates to: FSISVSTEMFRGRVTEPPPVGVF*VTLAWI
Trigger: AATCCAAGCTAGGGTCACCCAGAAGACACCCACAGG...AGGGGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR CCA 90 bp ACTGTTGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTCCAAGGCATCTAGGAAGCAGGCATCTAGGAAGCTaGTATTTGGCCAAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TVGAESFPEALSPRHLGSRHLGS*YLAKAV
Trigger: AACTGCCTTGGCCAAATACCAGCTTCCTAGATGCCT...GCTTCCTAGATGCCTTGGACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490902.1
3UTR CAA 72 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTaGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGC +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQH*TSLGRISRRKR
Trigger: GCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGATGGGACCAATCCAGATaGCGTTCTCAATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRWDQSR*RSQSLC
Trigger: ACACAGAGATTGAGAACGTCATCTGGATTGGTCCCA...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATGACGTTCTCAATCAGTAACTCCACTTGGTaGTGTCTAGTCGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRAKARAFLGPIQMTFSISNSTW*CLVGPG
Trigger: ACCTGGGCCGACTAGACATCACCAAGTGGAGTTACT...GATTGAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp AGGATCCCTGACACCACTGTTGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTCCTATTCCTCCTCAGTGGTaGCTTCAAAATTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RIPDTTVGAESFPEALSPIPPQW*LQNSFG
Trigger: ACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAAT...AGGACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR TCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTCGGAGCACATTAGAGTaGTGTTACAGGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGRSTLE*CYRRSS
Trigger: AGAACTTCTCCTGTAACATCACTCTAATGTGCTCCG...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTACATCCAGGCATCTCTaGGGCACTGAAGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACTSRHL*GTEGNS
Trigger: AGAATTTCCTTCAGTGCCTCAGAGATGCCTGGATGT...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCTATAAGTGTGCGAGGTaGCAAATGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAYKCAR*QMGQRH
Trigger: ATGTCTTTGCCCCATTTGTCACCTCGCACACTTATA...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCCCCCTCAGCAACATTTaGCCAGTCTTGGTAGAATTT +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAPLSNI*PVLVEF
Trigger: AAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGG...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGTGTGTGACTCTTTGGTaGCACCATGATGATCTATTT +
Preference number: 4 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHECVTLW*HHDDLF
Trigger: AAATAGATCATCATGGTGGCACCAAAGAGTCACACA...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGCCACTGATGGGCTTGTaGACCTCAGGCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAPLMGL*TSGLSS
Trigger: TGAGGACAGGCCTGAGGTGCACAAGCCCATCAGTGG...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCTTCTCAGAAAGAAACTaGTGGGAACTCCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAFSERN*WELLLT
Trigger: TGTCAGCAGGAGTTCCCACCAGTTTCTTTCTGAGAA...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CCA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTTCTCAGAAAGAAACTaGTGGGAACTCCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGAFSERN*WELLLT
Trigger: TGTCAGCAGGAGTTCCCACCAGTTTCTTTCTGAGAA...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGCTTCTCATATCCTTaGGAGAGCACAGAGTATAGC +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGSFSYP*ESTEYS
Trigger: GCTATACTCTGTGCTCTCCCAAGGATATGAGAAGCT...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR CCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAACTTCCGTGACATATaGAGTGACGGGATCATAGTC +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRNFRDI*SDGIIV
Trigger: GACTATGATCCCGTCACTCCATATGTCACGGAAGTT...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAACTTCCGTGACATATaGAGTGACGGGATCATAGTC +
Preference number: 4 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGNFRDI*SDGIIV
Trigger: GACTATGATCCCGTCACTCCATATGTCACGGAAGTT...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATATTCTGTTGTGGTGGTaGCACCACCTGAGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYILLWW*HHLRFP
Trigger: CGGAAACCTCAGGTGGTGCCACCACCACAACAGAAT...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTATCATTCTGTTGTGGTaGTGGCACCACCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACIILLW*WHHLRF
Trigger: AAACCTCAGGTGGTGCCACCACCACAACAGAATGAT...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTGCAGTGTTGAGAAGGTaGTGTAAAGGACAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIAVLRR*CKGQLV
Trigger: GACCAGCTGTCCTTTACACCACCTTCTCAACACTGC...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GTTACATTTTCTTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATTGGCTCTATCTGCTaGACAGTGGGGTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VTFSLGRAKARAFLGPIQIGSIC*TVGFRA
Trigger: GGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAAT...CTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR TCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGGCCCAGTCATCTGTGTaGCTCTTTGGTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAAQSSV*LFGATM
Trigger: CATGGTGGCACCAAAGAGTCACACAGATGACTGGGC...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GTGAATTCCTCCTCAGTGGTGACTTCAAAATTCCTTTGGTTTATCTGGGCTTTGCACCACTGTTGGGGCTaGGTCCTTTCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VNSSSVVTSKFLWFIWALHHCWG*VLSRGS
Trigger: AGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTG...CAAAGCCCAGATAAACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp TTCTCAATCTCTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCCTTGGGACCAATCCAGATaGCGTTCTCAATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FSISVSTEMFRGRVTEPPWDQSR*RSQSLC
Trigger: ACACAGAGATTGAGAACGTCATCTGGATTGGTCCCA...AGGGGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp GGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATGACGTTCTCAATCTCAGAGTCAGATTGCTaGTGCACAGGGAGTAACTCC +
Preference number: 4 (lower is better)
Translates to: GRAKARAFLGPIQMTFSISESDC*CTGSNS
Trigger: GGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGA...GATTGAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTCGGAGCACATTAGAGTaGTGTTACAGGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACRSTLE*CYRRSS
Trigger: AGAACTTCTCCTGTAACATCACTCTAATGTGCTCCG...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGCAGCGCCCTCCTGAGTaGCCTGGTCAAATACCTCAT +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAQRPPE*PGQIPH
Trigger: ATGAGGTATTTGACCAGGTCACTCAGGAGGGCGCTG...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATGCAGTAGATTGTGGCTaGGCTCTCTTCCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYAVDCG*ALFLLR
Trigger: TCTCAGAAGGAAGAGAGCTCAGCCACAATCTACTGC...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTACATCCAGGCATCTCTaGGGCACTGAAGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRITSRHL*GTEGNS
Trigger: AGAATTTCCTTCAGTGCCTCAGAGATGCCTGGATGT...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTTATAAGTGTGCGAGGTaGCAAATGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACYKCAR*QMGQRH
Trigger: ATGTCTTTGCCCCATTTGTCACCTCGCACACTTATA...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGATCTTTTCAGCAGTGTTaGGAAGGTGGTGTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRSFQQC*EGGVKD
Trigger: GTCCTTTACACCACCTTCTCAACACTGCTGAAAAGA...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp ACTGTTGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTCCTGCACCATCATCCCTGTGTGTGACTCTTTGGTaGCACCATGATGATCTATTT +
Preference number: 4 (lower is better)
Translates to: TVGAESFPEALSPAPSSLCVTLW*HHDDLF
Trigger: AAATAGATCATCATGGTGGCACCAAAGAGTCACACA...CAGGGATGATGGTGCAGGACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR GCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATTGGATCTGCCGTTGCTaGTTCTTCCCTCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYWICRC*FFPLFA
Trigger: AGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCA...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp GCCCAGGTAGCTTTTGACCATAATGGTTACATTTTCTTTGGGACGTGCGAAAGCGAGACTGAAGGAGGATaGACTTACCACAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: AQVAFDHNGYIFFGTCESETEGG*TYHSFR
Trigger: GCGGAAGCTGTGGTAAGTGCATCCTCCTTCAGTCTC...GCTTTCGCACGTCCCAAAGAAAATGTAACCATTATGGTCAAAAGCTACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATTCCTCTATCTTCAGCTaGCTGATCTTCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYSSIFS*LIFREQ
Trigger: CTGCTCCCTGAAGATCAGCCAGCTGAAGATAGAGGA...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAGGTGTGATTCCCCTTaGGACACAACAGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYRCDSP*DTTASF
Trigger: GAAGGAAGCTGTTGTGTCCCAAGGGGAATCACACCT...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATTCAGAAAGAAACTGGTaGGAACTCCTGCTGACAGGG +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYSERNW*ELLLTG
Trigger: CCCTGTCAGCAGGAGTTCCCACCAGTTTCTTTCTGA...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CCA 90 bp CAGGGTGAATTCCTCCTCAGTGGTGACTTCAAAATTCCTTTGGTTTATCTGGGCATGTTTCCCAGGAGTTaGGCCCATGAGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QGEFLLSGDFKIPLVYLGMFPRS*AHEQEE
Trigger: CTCTTCCTGCTCATGGGCCCAACTCCTGGGAAACAT...GCCCAGATAAACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAATTCACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CCA 90 bp CAGGGTGAATTCCTCCTCAGTGGTGACTTCAAAATTCCTTTGGTTTATCTGGGCCAAAACAGATGGGTTTaGGACCCAGACTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: QGEFLLSGDFKIPLVYLGQNRWV*DPDSTR
Trigger: CCTGGTGGAGTCTGGGTCCCAAACCCATCTGTTTTG...GCCCAGATAAACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAATTCACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGGGAGCTTCTCTGGCTaGCGGGGTTCTGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFGSFSG*RGSGLC
Trigger: GCACAGCCCAGAACCCCGTCAGCCAGAGAAGCTCCC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGCTATCTTCAGCTGGCTaGTCTTCAGGGAGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCALSSAG*SSGSSP
Trigger: AGGACTGCTCCCTGAAGATCAGCCAGCTGAAGATAG...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATACATCCAGGCATCTCTaGGGCACTGAAGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYTSRHL*GTEGNS
Trigger: AGAATTTCCTTCAGTGCCTCAGAGATGCCTGGATGT...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GAATTCCTCCTCAGTGGTGACTTCAAAATTCCTTTGGTTTATCTGGGCTTTGTAACAGTCCCAGGTGGCTaGGATCCTCTCTGGGGTACT +
Preference number: 4 (lower is better)
Translates to: EFLLSGDFKIPLVYLGFVTVPGG*DPLWGT
Trigger: AGTACCCCAGAGAGGATCTCAGCCACCTGGGACTGT...TACAAAGCCCAGATAAACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR GCA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCTGTGTGACTCTTTGGTaGCACCATGATGATCTATTT +
Preference number: 4 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQACVTLW*HHDDLF
Trigger: AAATAGATCATCATGGTGGCACCAAAGAGTCACACA...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGTGTGTGACTCTTTGGTaGCACCATGATGATCTATTT +
Preference number: 4 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRCVTLW*HHDDLF
Trigger: AAATAGATCATCATGGTGGCACCAAAGAGTCACACA...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTTTGGCCCTCAGGGGCTaGGTCATGTCCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFLALRG*VMSSAL
Trigger: GAGGGCGCTGGACATGACCCAGCCCCTGAGGGCCAA...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GCCCAGGTAGCTTTTGACCATAATGGTTACATTTTCTTTGGGACGTGCGAAAGCCTAGACCAAAACAGATaGGTTTGGGACCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: AQVAFDHNGYIFFGTCESLDQNR*VWDPDS
Trigger: GGAGTCTGGGTCCCAAACCCATCTGTTTTGGTCTAG...GCTTTCGCACGTCCCAAAGAAAATGTAACCATTATGGTCAAAAGCTACCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR CCA 90 bp ATCATTCAGAGTCAGATTGCTGATGCACAGGGAGTAACTCCACTTGGTGATGTCGGGCTTCCGAGGCTCTaGAGAGCACTTTTGAAATTC +
Preference number: 4 (lower is better)
Translates to: IIQSQIADAQGVTPLGDVGLPRL*RALLKF
Trigger: GAATTTCAAAAGTGCTCTCCAGAGCCTCGGAAGCCC...GACATCACCAAGTGGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR TCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGGCAGTAGATTGTGGCTaGGCTCTCTTCCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAAVDCG*ALFLLR
Trigger: TCTCAGAAGGAAGAGAGCTCAGCCACAATCTACTGC...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATCCCCTCAGCAACATTTaGCCAGTCTTGGTAGAATTT +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYPLSNI*PVLVEF
Trigger: AAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGG...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TCAATCTCTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCCTAGGTCTGGAGAGCACTTTTaGAATTCTAGACCAAAACAG +
Preference number: 4 (lower is better)
Translates to: SISVSTEMFRGRVTEPPRSGEHF*NSRPKQ
Trigger: CTGTTTTGGTCTAGAATTTCAAAAGTGCTCTCCAGA...CCTAGGGGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR CCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGGAATGGAGCCTCCATTaGACTCAGAAGCATGGGGTT +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAEWSLH*TQKHGV
Trigger: AACCCCATGCTTCTGAGTCCAATGGAGGCTCCATTC...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGTCCTCTATCTTCAGCTaGCTGATCTTCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCASSIFS*LIFREQ
Trigger: CTGCTCCCTGAAGATCAGCCAGCTGAAGATAGAGGA...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp TACATTTTCTTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATTCCTCTCTGGGGTACTaGATTGGCTCTATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YIFFGTCESKSIFGTNPDSSLGY*IGSICW
Trigger: CCAGCAGATAGAGCCAATCCAGTACCCCAGAGAGGA...ATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR TCA 90 bp AGAGCATTTTTGGGACCAATCCAGATGACGTTCTCAATCTCTGTGTCTACTGAGGAGAATATTTGCAGCTaGCTCCTCTGTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: RAFLGPIQMTFSISVSTEENICS*LLCGLL
Trigger: CAGTAAGCCACAGAGGAGTCAGCTGCAAATATTCTC...CTCAGTAGACACAGAGATTGAGAACGTCATCTGGATTGGTCCCAAAAATGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp ATAGACGAACAGGGTGAATTCCTCCTCAGTGGTGACTTCAAAATTCCTTTGGTTTCAGAGTCAGATTGCTaGTGCACAGGGAGTAACTCC +
Preference number: 4 (lower is better)
Translates to: IDEQGEFLLSGDFKIPLVSESDC*CTGSNS
Trigger: GGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGA...AACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAATTCACCCTGTTCGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp TTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATGACGTTCTCATTCCTCCTCAGTGGTaGCTTCAAAATTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: FGTCESKSIFGTNPDDVLIPPQW*LQNSFG
Trigger: ACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAAT...GAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGACGCTGGAGGCCTCTaGGCACACGTAGGCATGGTA +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFDAGGL*AHVGMV
Trigger: TACCATGCCTACGTGTGCTCAGAGGCCTCCAGCGTC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGCATGTGAGGTTGGGGTaGTTTTCACTGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAHVRLG*FSLLLH
Trigger: ATGGAGAAGCAGTGAAAATCACCCCAACCTCACATG...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR TCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGGAAGGAGCCTGTGTCTaGACTATTAATGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAEGACV*TINGFG
Trigger: CCCAAACCCATTAATAGTTCAGACACAGGCTCCTTC...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp TCAATCTCTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCCTAGGCTGAAAACTCTGACTTaGTCAGTATGCACTATATAC +
Preference number: 4 (lower is better)
Translates to: SISVSTEMFRGRVTEPPRLKTLT*SVCTIY
Trigger: GTATATAGTGCATACTGATCAAGTCAGAGTTTTCAG...CCTAGGGGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR GCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGGAGAGAGGCAGCAGCTaGTTTTCCTTTCAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAERGSS*FSFQVK
Trigger: TTTCACCTGAAAGGAAAAGCAGCTGCTGCCTCTCTC...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATATCTGTGTGACTCTTTaGTGCCACCATGATGATCTA +
Preference number: 4 (lower is better)
Translates to: APQQHLTSLGRISRRKRYICVTL*CHHDDL
Trigger: TAGATCATCATGGTGGCACCAAAGAGTCACACAGAT...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTTTCAGGGAGCAGTCCTaGCTGGAGACCCACACCCTG +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFFREQS*LETHTL
Trigger: CAGGGTGTGGGTCTCCAGCCAGGACTGCTCCCTGAA...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGCGTGTGGCCAGCTGTaGGTTCTGGTGTATCCGCTG +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFACGQL*VLVYPL
Trigger: CAGCGGATACACCAGAACCCACAGCTGGCCACACGC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR TCA 90 bp TACATTTTCTTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATTGGGACCAATCCAGATaGCGTTCTCAATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: YIFFGTCESKSIFGTNPDWDQSR*RSQSLC
Trigger: ACACAGAGATTGAGAACGTCATCTGGATTGGTCCCA...ATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGTCAGAGCTGCTGTCTaGGGTGGGTGTAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFVRAAV*GGCRLL
Trigger: CAACAGCCTACACCCACCTCAGACAGCAGCTCTGAC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTCCACTGATGGGCTTGTaGACCTCAGGCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFPLMGL*TSGLSS
Trigger: TGAGGACAGGCCTGAGGTGCACAAGCCCATCAGTGG...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGAACTTCCGTGACATATaGAGTGACGGGATCATAGTC +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCANFRDI*SDGIIV
Trigger: GACTATGATCCCGTCACTCCATATGTCACGGAAGTT...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGGGTCCATGTGTACATaGCAGTGTTTCCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFGSMCT*QCFPRP
Trigger: AGGACGGGGGAAACACTGTCATGTACACATGGACCC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR GCA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGGGCTTTGTAGGATCCTaGATCATTCAGAGTCAGATT +
Preference number: 4 (lower is better)
Translates to: QHLTSLGRISRRKRYKCAGFVGS*IIQSQI
Trigger: AATCTGACTCTGAATGATGCAGGATCCTACAAAGCC...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTCAGGTCTGGGTCACATaGTGTTCGGGAGACGGTAAG +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFQVWVT*CSGDGK
Trigger: CTTACCGTCTCCCGAACACCATGTGACCCAGACCTG...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp ATAGACGAACAGGGTGAATTCCTCCTCAGTGGTGACTTCAAAATTCCTTTGGTTTCACCCTCGATGACGTaGACGGACAACTTTTCAATA +
Preference number: 4 (lower is better)
Translates to: IDEQGEFLLSGDFKIPLVSPSMT*TDNFSI
Trigger: TATTGAAAAGTTGTCCGTCCACGTCATCGAGGGTGA...AACCAAAGGAATTTTGAAGTCACCACTGAGGAGGAATTCACCCTGTTCGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGAGCTCTCTTCCTTCTaGGAAACTGGGGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFELSSF*ETGVFP
Trigger: GGGAAAGACCCCAGTTTCTCAGAAGGAAGAGAGCTC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTACAACAGCTTCCTTCTaGAGCGGGGTCCATGTGTAC +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFTTASF*SGVHVY
Trigger: GTACACATGGACCCCGCTGCAGAAGGAAGCTGTTGT...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR GCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGAGACTGAAGGAGGATaGACTTACCACAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFETEGG*TYHSFR
Trigger: GCGGAAGCTGTGGTAAGTGCATCCTCCTTCAGTCTC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTACAGAGTATAGCGTGTaGCCAGCTGTGGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFTEYSV*PAVGSG
Trigger: ACCAGAACCCACAGCTGGCCACACGCTATACTCTGT...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS-3UTR GCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTTGGATCTGCCGTTGCTaGTTCTTCCCTCTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFWICRC*FFPLFA
Trigger: AGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCA...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR GCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGAGTGGATCTGCCGTTaGTGCTTCTTCCCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFEWICR*CFFPLF
Trigger: AAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGAATGGAGCCTCCATTaGACTCAGAAGCATGGGGTT +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFEWSLH*TQKHGV
Trigger: AACCCCATGCTTCTGAGTCCAATGGAGGCTCCATTC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTAAGATCATTCTGTTGTaGTGGTGGCACCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFKIILL*WWHHLR
Trigger: CCTCAGGTGGTGCCACCACCACAACAGAATGATCTT...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp GACGTGGACGGACAACTTTTCAATAAATGGTGCATAGACGAACAGGGTGAATTCCAACTTTTCAATAAATaGTGCATAGACGAACAGGGT +
Preference number: 4 (lower is better)
Translates to: DVDGQLFNKWCIDEQGEFQLFNK*CIDEQG
Trigger: ACCCTGTTCGTCTATGCACCATTTATTGAAAAGTTG...GAATTCACCCTGTTCGTCTATGCACCATTTATTGAAAAGTTGTCCGTCCACGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTCATGTGAGGTTGGGGTaGTTTTCACTGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFHVRLG*FSLLLH
Trigger: ATGGAGAAGCAGTGAAAATCACCCCAACCTCACATG...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR GCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGAGAGAGGCAGCAGCTaGTTTTCCTTTCAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFERGSS*FSFQVK
Trigger: TTTCACCTGAAAGGAAAAGCAGCTGCTGCCTCTCTC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTATCATTCTGTTGTGGTaGTGGCACCACCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFIILLW*WHHLRF
Trigger: AAACCTCAGGTGGTGCCACCACCACAACAGAATGAT...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTCGGAGCACATTAGAGTaGTGTTACAGGAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFRSTLE*CYRRSS
Trigger: AGAACTTCTCCTGTAACATCACTCTAATGTGCTCCG...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTTATAAGTGTGCGAGGTaGCAAATGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFYKCAR*QMGQRH
Trigger: ATGTCTTTGCCCCATTTGTCACCTCGCACACTTATA...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR TCA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTTCTTTTCAGCAGTGTTaGGAAGGTGGTGTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFSFQQC*EGGVKD
Trigger: GTCCTTTACACCACCTTCTCAACACTGCTGAAAAGA...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CCA 90 bp GTCCCATCGGCAGGACCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTaGGGATGGCGGAGCGGTCTCCAGTGGCAGGTGGGGGCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VPSAGPFQLCCAAVR*GWRSGLQWQVGARA
Trigger: GGCCCTCGCCCCCACCTGCCACTGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGTCCTGCCGATGGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CAA 90 bp ACCCTTCCAGCTCTGCTGCGCGGCGGTGAGGTGGGGATGGCGGAGCGGTCTCCAGCGCGGCCCGCAGGGTaGGAGGCCAGCTCCGCATCA +
Preference number: 5 (lower is better)
Translates to: TLPALLRGGEVGMAERSPARPAG*EASSAS
Trigger: TGATGCGGAGCTGGCCTCCAACCCTGCGGGCCGCGC...TGGAGACCGCTCCGCCATCCCCACCTCACCGCCGCGCAGCAGAGCTGGAAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CAA 90 bp TCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCTCCTCGTCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: SWVQPRTVGLHPGDPSSSSLTPL*GLSPFQ
Trigger: CTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGA...CGAGGAGCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CAA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAGGTGGGTGTAGGCTGTaGCCTGGCAGGCCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: GEKEGEGPHPGISEALKEGGCRL*PGRPEG
Trigger: CCCCTCAGGCCTGCCAGGCAACAGCCTACACCCACC...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGGGTGGGTGTAGGCTGTaGCCTGGCAGGCCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLGGCRL*PGRPEG
Trigger: CCCCTCAGGCCTGCCAGGCAACAGCCTACACCCACC...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CCA 90 bp CTGCCACAGTCCCAGGTGGCTGAGATCCTCTCTGGGGTACTGGATTaGCTCTATCTGCTGGACAGTGGGGTTCCGGGCCATGCAGCGGAG +
Preference number: 5 (lower is better)
Translates to: LPQSQVAEILSGVLD*LYLLDSGVPGHAAE
Trigger: CTCCGCTGCATGGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCTGGGACTGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CAA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGGGATCATAGTCTGCTaGGCCCTCAGGGGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: KGEKEGEGPHPGISEALKGIIVC*ALRGWV
Trigger: GACCCAGCCCCTGAGGGCCAAGCAGACTATGATCCC...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAACTCCTGCTGACAGGGTaGCTGGCTGTGCATGTGAGG +
Preference number: 5 (lower is better)
Translates to: GEKEGEGPHPGISEALKELLLTG*LAVHVR
Trigger: CCTCACATGCACAGCCAGCAACCCTGTCAGCAGGAG...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS TCA 90 bp ACACGTAGGCATGGTAGGGGCCGGCGTCCTCTATCTTCAGCTGGCTaGTCTTCAGGGAGCAGTCCTGGCTGGAGACCCACACCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: TRRHGRGRRPLSSAG*SSGSSPGWRPTPCS
Trigger: AGAACAGGGTGTGGGTCTCCAGCCAGGACTGCTCCCTGAAGATCAGCCAGCTGAAGATAGAGGACGCCGGCCCCTACCATGCCTACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
ENST00000479663.2
CDS TCA 90 bp GATGAGCAGGGTGACATGTGTCATGCTGGTGACGCTGGAGGCCTCTaGGCACACGTAGGCATGGTAGGGGCCGGCGTCCTCTATCTTCAG +
Preference number: 5 (lower is better)
Translates to: DEQGDMCHAGDAGGL*AHVGMVGAGVLYLQ
Trigger: CTGAAGATAGAGGACGCCGGCCCCTACCATGCCTACGTGTGCTCAGAGGCCTCCAGCGTCACCAGCATGACACATGTCACCCTGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
ENST00000479663.2
CDS TCA 90 bp GTCCTCATCCTCCTCAGTTGTGAGGTTGCTGTCAGAGCTGCTGTCTaGGGTGGGTGTAGGCTGTTGCCTGGCAGGCCTGAGGGGAGTGTC +
Preference number: 5 (lower is better)
Translates to: VLILLSCEVAVRAAV*GGCRLLPGRPEGSV
Trigger: GACACTCCCCTCAGGCCTGCCAGGCAACAGCCTACACCCACCTCAGACAGCAGCTCTGACAGCAACCTCACAACTGAGGAGGATGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS GCA 90 bp CCCAGGTGGCTGAGATCCTCTCTGGGGTACTGGATTGGCTCTATCTaGTGGACAGTGGGGTTCCGGGCCATGCAGCGGAGAGATGTTTCC +
Preference number: 5 (lower is better)
Translates to: PRWLRSSLGYWIGSI*WTVGFRAMQRRDVS
Trigger: GGAAACATCTCTCCGCTGCATGGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS CCA 90 bp TGCCCAACATGGACAGGGAGGGAGCTTCTCTGGCTGACGGGGTTCTaGGCTGTGCAGATGTATGGCAGGTCTGGGTCACATGGTGTTCGG +
Preference number: 5 (lower is better)
Translates to: CPTWTGRELLWLTGF*AVQMYGRSGSHGVR
Trigger: CCGAACACCATGTGACCCAGACCTGCCATACATCTGCACAGCCCAGAACCCCGTCAGCCAGAGAAGCTCCCTCCCTGTCCATGTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS CCA 90 bp AGTAGCTGCCACAGTCCCAGGTGGCTGAGATCCTCTCTGGGGTACTaGATTGGCTCTATCTGCTGGACAGTGGGGTTCCGGGCCATGCAG +
Preference number: 5 (lower is better)
Translates to: SSCHSPRWLRSSLGY*IGSICWTVGFRAMQ
Trigger: CTGCATGGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCTGGGACTGTGGCAGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CAA 90 bp TCCGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCAACAGAAGAGAATATTaGCAGCTGACTCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: SASWVQPRTVGLHPGDPSNRREY*QLTPLW
Trigger: CCACAGAGGAGTCAGCTGCAAATATTCTCTTCTGTT...GCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CAA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAATCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: GEKEGEGPHPGISEALKESLTPL*GLSPFQ
Trigger: CTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGA...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS GCA 90 bp GTGAGGTTGCTGTCAGAGCTGCTGTCTGAGGTGGGTGTAGGCTGTTaGCTGGCAGGCCTGAGGGGAGTGTCCAGCTTCTCATATCCTTGG +
Preference number: 5 (lower is better)
Translates to: VRLLSELLSEVGVGC*LAGLRGVSSFSYPW
Trigger: CCAAGGATATGAGAAGCTGGACACTCCCCTCAGGCCTGCCAGGCAACAGCCTACACCCACCTCAGACAGCAGCTCTGACAGCAACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS GCA 90 bp GTGAGGTTGCTGTCAGAGCTGCTGTCTGAGGTGGGTGTAGGCTGTTaGCTGGCAGGCCTGAGGGGAGTGTCCAGCTTCTCATATCCTGGT +
Preference number: 5 (lower is better)
Translates to: VRLLSELLSEVGVGC*LAGLRGVSSFSYPG
Trigger: ACCAGGATATGAGAAGCTGGACACTCCCCTCAGGCCTGCCAGGCAACAGCCTACACCCACCTCAGACAGCAGCTCTGACAGCAACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368035.1
ENST00000368037.9
CDS GCA 90 bp GGTACTGGATTGGCTCTATCTGCTGGACAGTGGGGTTCCGGGCCATaGAGCGGAGAGATGTTTCCCAGGAGTTGGGCCCATGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: GTGLALSAGQWGSGP*SGEMFPRSWAHEQE
Trigger: TTCCTGCTCATGGGCCCAACTCCTGGGAAACATCTCTCCGCTGCATGGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS CCA 90 bp GGATGTGTTAAACAACCAGACAACCTTCTCTGTGTCCCGGCAGGCTaGGAGTGCAAGTGGCAGGGTGACTGGCTCTCCCAGGACCCCTAC +
Preference number: 5 (lower is better)
Translates to: GCVKQPDNLLCVPAG*ECKWQGDWLSQDPY
Trigger: GTAGGGGTCCTGGGAGAGCCAGTCACCCTGCCACTTGCACTCCCAGCCTGCCGGGACACAGAGAAGGTTGTCTGGTTGTTTAACACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS CCA 90 bp AGGTGGCTGAGATCCTCTCTGGGGTACTGGATTGGCTCTATCTGCTaGACAGTGGGGTTCCGGGCCATGCAGCGGAGAGATGTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: RWLRSSLGYWIGSIC*TVGFRAMQRRDVSQ
Trigger: CTGGGAAACATCTCTCCGCTGCATGGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CAA 90 bp TCCGCATCATGGGTGCAGCCCCGCACTGTGGGCCTGCATCCCGGGGATCCCAGCATGGTTACATTTTCTTaGGGACGTGCGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: SASWVQPRTVGLHPGDPSMVTFS*GRAKAR
Trigger: TCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCAT...GCTGGGATCCCCGGGATGCAGGCCCACAGTGCGGGGCTGCACCCATGATGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368039.2
CDS-3UTR CAA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTTCCACTGATGGGCTaGTGCACCTCAGGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQLPLMG*CTSGLS
Trigger: GGACAGGCCTGAGGTGCACAAGCCCATCAGTGGAAG...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS TCA 90 bp AAGCGGGAGCACAGAAGGACAGTAGCTGCCACAGTCCCAGGTGGCTaGGATCCTCTCTGGGGTACTGGATTGGCTCTATCTGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: KREHRRTVAATVPGG*DPLWGTGLALSAGQ
Trigger: CTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCTGGGACTGTGGCAGCTACTGTCCTTCTGTGCTCCCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS CCA 90 bp GACATATGGAGTGACGGGATCATAGTCTGCTTGGCCCTCAGGGGCTaGGTCATGTCCAGCGCCCTCCTGAGTGACCTGGTCAAATACCTC +
Preference number: 5 (lower is better)
Translates to: DIWSDGIIVCLALRG*VMSSALLSDLVKYL
Trigger: GAGGTATTTGACCAGGTCACTCAGGAGGGCGCTGGACATGACCCAGCCCCTGAGGGCCAAGCAGACTATGATCCCGTCACTCCATATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTCCACAGTCTCCCCCGTaGTTCCTCCTCTGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGPQSPP*FLLWRL
Trigger: GAGCCTCCAGAGGAGGAACAACGGGGGAGACTGTGG...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTGGTGGGTGTAGGCTGTaGCCTGGCAGGCCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIGGCRL*PGRPEG
Trigger: CCCCTCAGGCCTGCCAGGCAACAGCCTACACCCACC...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGGGGATCATAGTCTGCTaGGCCCTCAGGGGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRGIIVC*ALRGWV
Trigger: GACCCAGCCCCTGAGGGCCAAGCAGACTATGATCCC...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCGGGATCATAGTCTGCTaGGCCCTCAGGGGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAGIIVC*ALRGWV
Trigger: GACCCAGCCCCTGAGGGCCAAGCAGACTATGATCCC...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp AGTAGCTGCCACAGTCCCAGGTGGCTGAGATCCTCTCTGGGGTACTGGATTGGCCTCTGGGGTACTGGATaGGCTCTATCTGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: SSCHSPRWLRSSLGYWIGLWGTG*ALSAGQ
Trigger: CTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAG...GCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCTGGGACTGTGGCAGCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CAA 90 bp CTGTGTCTACTGAGATGTTTAGGGGGAGAGTCACGGAACCCCCTAGGATCCCTGTCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: LCLLRCLGGESRNPLGSLSLTPL*GLSPFQ
Trigger: CTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGA...CAGGGATCCTAGGGGGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR CAA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGCTCAAGATCATTCTGTaGTGGTGGTGGCACCACCTG +
Preference number: 5 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLLKIIL*WWWHHL
Trigger: CAGGTGGTGCCACCACCACAACAGAATGATCTTGAG...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CCA 90 bp CCAGCTTCTCATATCCTGGTGTATCCGCTGGGGCCTCAGCTTGGCTaGAACAGAAGGCTGGGACTGAACACCGTCCTTTTCGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: PASHILVYPLGPQLG*NRRLGLNTVLFASK
Trigger: TTTGGAAGCGAAAAGGACGGTGTTCAGTCCCAGCCTTCTGTTCCAGCCAAGCTGAGGCCCCAGCGGATACACCAGGATATGAGAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAAGGCTCCACGTGATTTaGGGCTTCCTCAGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRRLHVI*GFLSLR
Trigger: CCGCAGGCTGAGGAAGCCCAAAATCACGTGGAGCCT...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGACTCCTGCTGACAGGGTaGCTGGCTGTGCATGTGAGG +
Preference number: 5 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRLLLTG*LAVHVR
Trigger: CCTCACATGCACAGCCAGCAACCCTGTCAGCAGGAG...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTCTTCCACTGATGGGCTaGTGCACCTCAGGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACLPLMG*CTSGLS
Trigger: GGACAGGCCTGAGGTGCACAAGCCCATCAGTGGAAG...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGCCCCTCAGCAACATTaGACCAGTCTTGGTAGAATT +
Preference number: 5 (lower is better)
Translates to: KGEKEGEGPHPGISEALKAPQQH*TSLGRI
Trigger: AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CCA 90 bp TTTTCTTGTAGGGACCCTGTGGGTGTCTTCTGGGTGACCCTAGCTTaGATTCCCAGATTCCAGGGCTTCCGAGGCTCTGGAGAGCACTTT +
Preference number: 5 (lower is better)
Translates to: FSCRDPVGVFWVTLA*IPRFQGFRGSGEHF
Trigger: AAAGTGCTCTCCAGAGCCTCGGAAGCCCTGGAATCTGGGAATCCAAGCTAGGGTCACCCAGAAGACACCCACAGGGTCCCTACAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485624.1
ENST00000490902.1
CDS-3UTR CAA 90 bp AAGGGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGAACAGAAGAGAATATTaGCAGCTGACTCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: KGEKEGEGPHPGISEALKNRREY*QLTPLW
Trigger: CCACAGAGGAGTCAGCTGCAAATATTCTCTTCTGTT...CTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp TGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGATCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: CKGQLVQAPQQHLTSLGRSLTPL*GLSPFQ
Trigger: CTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGA...TCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTTCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACSLTPL*GLSPFQ
Trigger: CTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGA...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTCTCCTGCTGACAGGGTaGCTGGCTGTGCATGTGAGG +
Preference number: 5 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRILLLTG*LAVHVR
Trigger: CCTCACATGCACAGCCAGCAACCCTGTCAGCAGGAG...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTCTTCCACTGATGGGCTaGTGCACCTCAGGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRILPLMG*CTSGLS
Trigger: GGACAGGCCTGAGGTGCACAAGCCCATCAGTGGAAG...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAAGAACTATTAATGGGTTaGGGAGTCCTTAAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GEKEGEGPHPGISEALKEELLMG*GVLKGE
Trigger: CTCACCCTTAAGGACTCCCAAACCCATTAATAGTTC...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS TCA 90 bp CCATGTGGGAGCCAAGGAGAGAGGCCGCAGAAGAAACCAAGCCGCTaGTACCTTCATTGGCCTCCAGAATTGTGTTCTGGAGAAATGTGG +
Preference number: 5 (lower is better)
Translates to: PCGSQGERPQKKPSR*YLHWPPELCSGEMW
Trigger: CCACATTTCTCCAGAACACAATTCTGGAGGCCAATGAAGGTATCAGCGGCTTGGTTTCTTCTGCGGCCTCTCTCCTTGGCTCCCACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 90 bp ATACATGGTGTTCTCTCCAACCACAGACTCAACTTCCGTGACATATaGAGTGACGGGATCATAGTCTGCTTGGCCCTCAGGGGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: IHGVLSNHRLNFRDI*SDGIIVCLALRGWV
Trigger: GACCCAGCCCCTGAGGGCCAAGCAGACTATGATCCCGTCACTCCATATGTCACGGAAGTTGAGTCTGTGGTTGGAGAGAACACCATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CCA 90 bp GTGGTGGTGGCACCACCTGAGGTTTCCGTATGGAGCAGTAGATTGTaGCTGAGCTCTCTTCCTTCTGAGAAACTGGGGTCTTTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: VVVAPPEVSVWSSRL*LSSLPSEKLGSFPV
Trigger: TACAGGGAAAGACCCCAGTTTCTCAGAAGGAAGAGAGCTCAGCCACAATCTACTGCTCCATACGGAAACCTCAGGTGGTGCCACCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp AGTAGCTGCCACAGTCCCAGGTGGCTGAGATCCTCTCTGGGGTACTGGATTGGCAACAGAAGAGAATATTaGCAGCTGACTCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: SSCHSPRWLRSSLGYWIGNRREY*QLTPLW
Trigger: CCACAGAGGAGTCAGCTGCAAATATTCTCTTCTGTT...GCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCTGGGACTGTGGCAGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS-3UTR CAA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAGGCTCCACGTGATTTaGGGCTTCCTCAGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: APQQHLTSLGRISRRKRYRLHVI*GFLSLR
Trigger: CCGCAGGCTGAGGAAGCCCAAAATCACGTGGAGCCT...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGACCCAATCCAAAGCTTaGTGTTTCTCTCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQTQSKA*CFSQVL
Trigger: CAGGACCTGAGAGAAACACAAAGCTTTGGATTGGGT...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp GAGGTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCCTCAAGATCATTCTGTaGTGGTGGTGGCACCACCTG +
Preference number: 5 (lower is better)
Translates to: EVTNGAKTSEAHRLQEGALKIIL*WWWHHL
Trigger: CAGGTGGTGCCACCACCACAACAGAATGATCTTGAG...GGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GGTGAGAAGGAGGGGGAGGGGCCACATCCAGGCATCTCTGAGGCACTGAAGGAATGTGTGACAATTCTCTaGGGTTCTTTTCAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: GEKEGEGPHPGISEALKECVTIL*GSFQQC
Trigger: ACACTGCTGAAAAGAACCCAAGAGAATTGTCACACA...TTCCTTCAGTGCCTCAGAGATGCCTGGATGTGGCCCCTCCCCCTCCTTCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS TCA 90 bp AGGCTGGGACTGAACACCGTCCTTTTCGCTTCCAAATGCACCAGCTaGAGATCCCAACGCACAGAAGGCAAACCATCAGGAACAACCCAA +
Preference number: 5 (lower is better)
Translates to: RLGLNTVLFASKCTS*RSQRTEGKPSGTTQ
Trigger: TTGGGTTGTTCCTGATGGTTTGCCTTCTGTGCGTTGGGATCTTCAGCTGGTGCATTTGGAAGCGAAAAGGACGGTGTTCAGTCCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CCA 90 bp TTAGAGCACAGACAATATAGACAGAGGGACACCCATGTGAAGACATaGAGAGAAAGTGGCCATGTGGGAGCCAAGGAGAGAGGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: LEHRQYRQRDTHVKT*RESGHVGAKERGRR
Trigger: TCTGCGGCCTCTCTCCTTGGCTCCCACATGGCCACTTTCTCTCCATGTCTTCACATGGGTGTCCCTCTGTCTATATTGTCTGTGCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 90 bp TTACAGGAGAAGTTCTCAGACACCTTCACAGACTTCATGGTGACTTaGGGCTCCTGCAGCTGCTCTGCAGGGACAACAGCATGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: LQEKFSDTFTDFMVT*GSCSCSAGTTAWED
Trigger: ATCTTCCCATGCTGTTGTCCCTGCAGAGCAGCTGCAGGAGCCCCAAGTCACCATGAAGTCTGTGAAGGTGTCTGAGAACTTCTCCTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471816.1
ENST00000479663.2
CDS-3UTR CAA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGGCTTCTTCCCTCTCTTaGCTAATGATGGATGTGTTA +
Preference number: 5 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLASSLS*LMMDVL
Trigger: TAACACATCCATCATTAGCAAAGAGAGGGAAGAAGC...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp CAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGCTTCTCCATGAGACATaGAGGTGTGATTCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: QLVQAPQQHLTSLGRISRLLHET*RCDSPW
Trigger: CCAAGGGGAATCACACCTCAATGTCTCATGGAGAAG...CCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp GGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGCTGGTCTTTCCCTGTAAGTaGAACACTTGTGCATACATG +
Preference number: 5 (lower is better)
Translates to: GNSEVLLSVSPRPHEVQLVFPCK*NTCAYM
Trigger: CATGTATGCACAAGTGTTCAACTTACAGGGAAAGAC...CAGCTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTCTCAAGATCATTCTGTaGTGGTGGTGGCACCACCTG +
Preference number: 5 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACLKIIL*WWWHHL
Trigger: CAGGTGGTGCCACCACCACAACAGAATGATCTTGAG...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS TCA 90 bp AGGAAGAGGAGAGAGGTCTGTAGAACAGAAGAGAATATTTGCAGCTaGCTCCTCTGTGGCTTACTGGAGAAAGGCCCAGGAGCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: RKRREVCRTEENICS*LLCGLLEKGPGAQS
Trigger: TGACTGGGCTCCTGGGCCTTTCTCCAGTAAGCCACAGAGGAGTCAGCTGCAAATATTCTCTTCTGTTCTACAGACCTCTCTCCTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000368039.2
ENST00000392203.8
ENST00000471816.1
ENST00000474998.1
ENST00000480837.5
ENST00000485624.1
ENST00000490902.1
CDS TCA 90 bp TGGATTCCCAGATTCCAGGGCTTCCGAGGCTCTGGAGAGCACTTTTaGAATTCTAGACCAAAACAGATGGGTTTGGGACCCAGACTCCAC +
Preference number: 5 (lower is better)
Translates to: WIPRFQGFRGSGEHF*NSRPKQMGLGPRLH
Trigger: GTGGAGTCTGGGTCCCAAACCCATCTGTTTTGGTCTAGAATTTCAAAAGTGCTCTCCAGAGCCTCGGAAGCCCTGGAATCTGGGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485624.1
ENST00000490902.1
CDS CCA 90 bp GTGTTTCTCTCAGGTCCTGAACAGATGTTCTCAGAAAGAAACTGGTaGGAACTCCTGCTGACAGGGTTGCTGGCTGTGCATGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: VFLSGPEQMFSERNW*ELLLTGLLAVHVRL
Trigger: CAACCTCACATGCACAGCCAGCAACCCTGTCAGCAGGAGTTCCCACCAGTTTCTTTCTGAGAACATCTGTTCAGGACCTGAGAGAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp GGCACTGAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGATGGTTACATTTTCTTaGGGACGTGCGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: GTEGNSEVLLSVSPRPHEMVTFS*GRAKAR
Trigger: TCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCAT...CTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGGCTTCTTCCCTCTCTTaGCTAATGATGGATGTGTTA +
Preference number: 5 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQASSLS*LMMDVL
Trigger: TAACACATCCATCATTAGCAAAGAGAGGGAAGAAGC...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTACCCAATCCAAAGCTTaGTGTTTCTCTCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGTQSKA*CFSQVL
Trigger: CAGGACCTGAGAGAAACACAAAGCTTTGGATTGGGT...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp GAAGGAAATTCTGAGGTGCTTCTGTCTGTGAGCCCCAGGCCCCATGAGGTCCAGGTCTTTCCCTGTAAGTaGAACACTTGTGCATACATG +
Preference number: 5 (lower is better)
Translates to: EGNSEVLLSVSPRPHEVQVFPCK*NTCAYM
Trigger: CATGTATGCACAAGTGTTCAACTTACAGGGAAAGAC...CTGGACCTCATGGGGCCTGGGGCTCACAGACAGAAGCACCTCAGAATTTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCGCCCCTCAGCAACATTaGACCAGTCTTGGTAGAATT +
Preference number: 5 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAAPQQH*TSLGRI
Trigger: AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGCCCCTCAGCAACATTaGACCAGTCTTGGTAGAATT +
Preference number: 5 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGAPQQH*TSLGRI
Trigger: AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS TCA 90 bp CCCAGCCCCAAACGCTATGGAGTGGGGACCTCTGCTTCTAGAATTTaGGTTGCCCGTGTCTTTGGTCTGAATTTAGGATGCATTGTGCTT +
Preference number: 5 (lower is better)
Translates to: PSPKRYGVGTSASRI*VARVFGLNLGCIVL
Trigger: AAGCACAATGCATCCTAAATTCAGACCAAAGACACGGGCAACTCAAATTCTAGAAGCAGAGGTCCCCACTCCATAGCGTTTGGGGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 90 bp TTTGTGTTTCTCTCAGGTCCTGAACAGATGTTCTCAGAAAGAAACTaGTGGGAACTCCTGCTGACAGGGTTGCTGGCTGTGCATGTGAGG +
Preference number: 5 (lower is better)
Translates to: FVFLSGPEQMFSERN*WELLLTGLLAVHVR
Trigger: CCTCACATGCACAGCCAGCAACCCTGTCAGCAGGAGTTCCCACCAGTTTCTTTCTGAGAACATCTGTTCAGGACCTGAGAGAAACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS CCA 90 bp GAACTAAAGGAGCTTCTCCTACCTCTACCTCACCCTTATTGTCCATaGCATCTCAGATTGACTTTGGTTTGGCCAGGTTTGGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: ELKELLLPLPHPYCP*HLRLTLVWPGLGVG
Trigger: TCCCACCCCCAAACCTGGCCAAACCAAAGTCAATCTGAGATGCCATGGACAATAAGGGTGAGGTAGAGGTAGGAGAAGCTCCTTTAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS-3UTR CAA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAACAGAAGAGAATATTaGCAGCTGACTCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGNRREY*QLTPLW
Trigger: CCACAGAGGAGTCAGCTGCAAATATTCTCTTCTGTT...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp CCTAGGATCCCTGACACCACTGTTGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTATGGTTACATTTTCTTaGGGACGTGCGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: PRIPDTTVGAESFPEALSMVTFS*GRAKAR
Trigger: TCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCAT...ACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR CAA 90 bp TGGTGTAAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTGAACTATTAATGGGTTaGGGAGTCCTTAAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: WCKGQLVQAPQQHLTSLGELLMG*GVLKGE
Trigger: CTCACCCTTAAGGACTCCCAAACCCATTAATAGTTC...ACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTTACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS GCA 90 bp ACTGGAGAAAGGCCCAGGAGCCCAGTCATCTGTGTGACTCTTTGGTaGCACCATGATGATCTATTTTCAGAACTGAGACTGAAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: TGERPRSPVICVTLW*HHDDLFSELRLKED
Trigger: ATCCTCCTTCAGTCTCAGTTCTGAAAATAGATCATCATGGTGGCACCAAAGAGTCACACAGATGACTGGGCTCCTGGGCCTTTCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368037.9
ENST00000392203.8
ENST00000474998.1
CDS CCA 90 bp GGAGACCCACACCCTGTTCTTGTAAGGATCCCTGGATTTAATGAGTaGATCTGCCGTTGCTGCTTCTTCCCTCTCTTTGCTAATGATGGA +
Preference number: 5 (lower is better)
Translates to: GDPHPVLVRIPGFNE*ICRCCFFPLFANDG
Trigger: TCCATCATTAGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTCATTAAATCCAGGGATCCTTACAAGAACAGGGTGTGGGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS CCA 90 bp GCTCTGGAGAGCACTTTTGAAATTCTAGACCAAAACAGATGGGTTTaGGACCCAGACTCCACCAGGAATTCCATGAGCAGGAAGAGGAGA +
Preference number: 5 (lower is better)
Translates to: ALESTFEILDQNRWV*DPDSTRNSMSRKRR
Trigger: TCTCCTCTTCCTGCTCATGGAATTCCTGGTGGAGTCTGGGTCCCAAACCCATCTGTTTTGGTCTAGAATTTCAAAAGTGCTCTCCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485624.1
ENST00000490902.1
CDS-3UTR CAA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCATGGTTACATTTTCTTaGGGACGTGCGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAMVTFS*GRAKAR
Trigger: TCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCAT...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATCTTCTCCATGAGACATaGAGGTGTGATTCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: APQQHLTSLGRISRRKRYLLHET*RCDSPW
Trigger: CCAAGGGGAATCACACCTCAATGTCTCATGGAGAAG...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCGTCTTTCCCTGTAAGTaGAACACTTGTGCATACATG +
Preference number: 5 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQAVFPCK*NTCAYM
Trigger: CATGTATGCACAAGTGTTCAACTTACAGGGAAAGAC...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GGGTTCTTTTCAGCAGTGTTGAGAAGGTGGTGTAAAGGACAGCTGGTCCAGGCCTGTGTGACAATTCTCTaGGGTTCTTTTCAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: GFFSAVLRRWCKGQLVQACVTIL*GSFQQC
Trigger: ACACTGCTGAAAAGAACCCAAGAGAATTGTCACACA...GGCCTGGACCAGCTGTCCTTTACACCACCTTCTCAACACTGCTGAAAAGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp TACATTTTCTTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATCTGGGTGACCCTAGCTaGGATTCCCAGATTCCAGGG +
Preference number: 5 (lower is better)
Translates to: YIFFGTCESKSIFGTNPDLGDPS*DSQIPG
Trigger: CCCTGGAATCTGGGAATCCAAGCTAGGGTCACCCAG...ATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS CCA 90 bp CTACCTCACCCTTATTGTCCATGGCATCTCAGATTGACTTTGGTTTaGCCAGGTTTGGGGGTGGGAATAGCTGGTGGTACTAATACAGTT +
Preference number: 5 (lower is better)
Translates to: LPHPYCPWHLRLTLV*PGLGVGIAGGTNTV
Trigger: AACTGTATTAGTACCACCAGCTATTCCCACCCCCAAACCTGGCCAAACCAAAGTCAATCTGAGATGCCATGGACAATAAGGGTGAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS-3UTR CAA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTATGGTTACATTTTCTTaGGGACGTGCGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACMVTFS*GRAKAR
Trigger: TCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCAT...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp AAAGGACAGCTGGTCCAGGCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTGAACTATTAATGGGTTaGGGAGTCCTTAAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: KGQLVQAPQQHLTSLGRIELLMG*GVLKGE
Trigger: CTCACCCTTAAGGACTCCCAAACCCATTAATAGTTC...AATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGCCTGGACCAGCTGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GTGACAAATGGGGCAAAGACATCTGAAGCCCATAGGCTCCAAGAAGGAGCCTGTTGTGTGACAATTCTCTaGGGTTCTTTTCAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: VTNGAKTSEAHRLQEGACCVTIL*GSFQQC
Trigger: ACACTGCTGAAAAGAACCCAAGAGAATTGTCACACA...ACAGGCTCCTTCTTGGAGCCTATGGGCTTCAGATGTCTTTGCCCCATTTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp GCCCCTCAGCAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATACCCAATCCAAAGCTTaGTGTTTCTCTCAGGTCGGT +
Preference number: 5 (lower is better)
Translates to: APQQHLTSLGRISRRKRYTQSKA*CFSQVG
Trigger: ACCGACCTGAGAGAAACACAAAGCTTTGGATTGGGT...ATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTGCTGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392203.8
CDS-3UTR CAA 90 bp GACCATAATGGTTACATTTTCTTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGCCAAAACAGATGGGTTaGGGACCCAGACTCCACCAG +
Preference number: 5 (lower is better)
Translates to: DHNGYIFFGTCESKSIFGPKQMG*GPRLHQ
Trigger: CTGGTGGAGTCTGGGTCCCAAACCCATCTGTTTTGG...CCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCATTATGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS TCA 90 bp TGTACAGAACACTTTTCTCTGCCCCCTTCACGGAGCACATTAGAGTaGTGTTACAGGAGAAGTTCTCAGACACCTTCACAGACTTCATGG +
Preference number: 5 (lower is better)
Translates to: CTEHFSLPPSRSTLE*CYRRSSQTPSQTSW
Trigger: CCATGAAGTCTGTGAAGGTGTCTGAGAACTTCTCCTGTAACATCACTCTAATGTGCTCCGTGAAGGGGGCAGAGAAAAGTGTTCTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
ENST00000480837.5
CDS-3UTR CAA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTCCACAGTCTCCCCCGTaGTTCCTCCTCTGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFPQSPP*FLLWRL
Trigger: GAGCCTCCAGAGGAGGAACAACGGGGGAGACTGTGG...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGGGATCATAGTCTGCTaGGCCCTCAGGGGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFGIIVC*ALRGWV
Trigger: GACCCAGCCCCTGAGGGCCAAGCAGACTATGATCCC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS-3UTR CAA 90 bp TTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGACCAATCCAGATGACGTTCTCCTAGGAAGCTGGTATTaGGCCAAGGCAGTTAATTTT +
Preference number: 5 (lower is better)
Translates to: FGTCESKSIFGTNPDDVLLGSWY*AKAVNF
Trigger: AAAATTAACTGCCTTGGCCAAATACCAGCTTCCTAG...GAGAACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490902.1
CDS TCA 90 bp GAGAACACAAAGATTGTGGCTTGGCAATGTTTGCTAAAGAGGTTATaGGATTTGACCACCTCAGCAGAAATGCTGCCAGTCTGGACTGTA +
Preference number: 5 (lower is better)
Translates to: ENTKIVAWQCLLKRL*DLTTSAEMLPVWTV
Trigger: TACAGTCCAGACTGGCAGCATTTCTGCTGAGGTGGTCAAATCTCATAACCTCTTTAGCAAACATTGCCAAGCCACAATCTTTGTGTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS-3UTR CAA 90 bp CAACATTTGACCAGTCTTGGTAGAATTTCGAGGAGGAAACGCTATAAGTGTGCGAACAGAAGAGAATATTaGCAGCTGACTCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QHLTSLGRISRRKRYKCANRREY*QLTPLW
Trigger: CCACAGAGGAGTCAGCTGCAAATATTCTCTTCTGTT...CGCACACTTATAGCGTTTCCTCCTCGAAATTCTACCAAGACTGGTCAAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS GCA 90 bp GTTCTTGTAAGGATCCCTGGATTTAATGAGTGGATCTGCCGTTGCTaGTTCTTCCCTCTCTTTGCTAATGATGGATGTGTTAAACAACCA +
Preference number: 5 (lower is better)
Translates to: VLVRIPGFNEWICRC*FFPLFANDGCVKQP
Trigger: TGGTTGTTTAACACATCCATCATTAGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTCATTAAATCCAGGGATCCTTACAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS GCA 90 bp CCTGTTCTTGTAAGGATCCCTGGATTTAATGAGTGGATCTGCCGTTaGTGCTTCTTCCCTCTCTTTGCTAATGATGGATGTGTTAAACAA +
Preference number: 5 (lower is better)
Translates to: PVLVRIPGFNEWICR*CFFPLFANDGCVKQ
Trigger: TTGTTTAACACATCCATCATTAGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTCATTAAATCCAGGGATCCTTACAAGAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS-3UTR CAA 90 bp GACCATAATGGTTACATTTTCTTTGGGACGTGCGAAAGCAAGAGCATTTTTGGGATGGTTACATTTTCTTaGGGACGTGCGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: DHNGYIFFGTCESKSIFGMVTFS*GRAKAR
Trigger: TCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCAT...CCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTAACCATTATGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474998.1
ENST00000490902.1
CDS-3UTR CAA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTACCCAATCCAAAGCTTaGTGTTTCTCTCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFTQSKA*CFSQVL
Trigger: CAGGACCTGAGAGAAACACAAAGCTTTGGATTGGGT...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS-3UTR CAA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTGGCACCACCTGTAAGTaGAACACTTGTGCATACATG +
Preference number: 5 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFGTTCK*NTCAYM
Trigger: CATGTATGCACAAGTGTTCAACTTACAGGTGGTGCC...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368035.1
CDS CCA 90 bp TGTAAAGTGGCAAAGAACTCGGCCACGTTGTATTCTAGTGTTTTGTaGAAAGCAGAATGTTTAAGTGATAAATTTGGGTACTTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: CKVAKNSATLYSSVL*KAECLSDKFGYLAV
Trigger: CACAGCTAAGTACCCAAATTTATCACTTAAACATTCTGCTTTCCACAAAACACTAGAATACAACGTGGCCGAGTTCTTTGCCACTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS-3UTR CAA 90 bp AGCATGATATTATGTACATCTTGTGTCATGTGTGACAATTCTCTTGGGTTCTTTTGTGTGACAATTCTCTaGGGTTCTTTTCAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: SMILCTSCVMCDNSLGFFCVTIL*GSFQQC
Trigger: ACACTGCTGAAAAGAACCCAAGAGAATTGTCACACA...AAAGAACCCAAGAGAATTGTCACACATGACACAAGATGTACATAATATCATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS TCA 90 bp TCTGGTTTTGCAGGTTCACAACTGAAGAAGAATTTTGCCTCAGGGTaGATCATATCTCAAGTCTCACCCATACCTGATTTAAATAATATT +
Preference number: 5 (lower is better)
Translates to: SGFAGSQLKKNFASG*IISQVSPIPDLNNI
Trigger: AATATTATTTAAATCAGGTATGGGTGAGACTTGAGATATGATTCACCCTGAGGCAAAATTCTTCTTCAGTTGTGAACCTGCAAAACCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 72 bp GTCCCGGCAGGCTGGGAGTGCAAGTGGCAGGGTGACTaGCTCTCCCAGGACCCCTACCACAGTCTCCCCCGT +
Preference number: 6 (lower is better)
Translates to: VPAGWECKWQGD*LSQDPYHSLPR
Trigger: ACGGGGGAGACTGTGGTAGGGGTCCTGGGAGAGCCAGTCACCCTGCCACTTGCACTCCCAGCCTGCCGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS TCA 72 bp GGTGACATGTGTCATGCTGGTGACGCTGGAGGCCTCTaGGCACACGTAGGCATGGTAGGGGCCGGCGTCCTC +
Preference number: 6 (lower is better)
Translates to: GDMCHAGDAGGL*AHVGMVGAGVL
Trigger: GAGGACGCCGGCCCCTACCATGCCTACGTGTGCTCAGAGGCCTCCAGCGTCACCAGCATGACACATGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
ENST00000479663.2
CDS CCA 72 bp AGTGACGGGATCATAGTCTGCTTGGCCCTCAGGGGCTaGGTCATGTCCAGCGCCCTCCTGAGTGACCTGGTC +
Preference number: 6 (lower is better)
Translates to: SDGIIVCLALRG*VMSSALLSDLV
Trigger: GACCAGGTCACTCAGGAGGGCGCTGGACATGACCCAGCCCCTGAGGGCCAAGCAGACTATGATCCCGTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CCA 72 bp AGTGCAGAAGGACCGGGGCAAGCACCTAAAGTTGGGTaGTGGAGGCCTAACTGGCAGCCTAGAGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SAEGPGQAPKVG*WRPNWQPRARG
Trigger: GCCCCTGGCTCTAGGCTGCCAGTTAGGCCTCCACCACCCAACTTTAGGTGCTTGCCCCGGTCCTTCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS TCA 72 bp CATGGTAGGGGCCGGCGTCCTCTATCTTCAGCTGGCTaGTCTTCAGGGAGCAGTCCTGGCTGGAGACCCACA +
Preference number: 6 (lower is better)
Translates to: HGRGRRPLSSAG*SSGSSPGWRPT
Trigger: TGTGGGTCTCCAGCCAGGACTGCTCCCTGAAGATCAGCCAGCTGAAGATAGAGGACGCCGGCCCCTACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
ENST00000479663.2
CDS CAA 72 bp CTGGCTCTCCCAGGACCCCTACCACAGTCTCCCCCGTaGTTCCTCCTCTGGAGGCTCCTGGATCTGTACAGA +
Preference number: 6 (lower is better)
Translates to: LALPGPLPQSPP*FLLWRLLDLYR
Trigger: TCTGTACAGATCCAGGAGCCTCCAGAGGAGGAACAACGGGGGAGACTGTGGTAGGGGTCCTGGGAGAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS GCA 72 bp TTGGCTCTATCTGCTGGACAGTGGGGTTCCGGGCCATaGAGCGGAGAGATGTTTCCCAGGAGTTGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: LALSAGQWGSGP*SGEMFPRSWAH
Trigger: ATGGGCCCAACTCCTGGGAAACATCTCTCCGCTGCATGGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS GCA 72 bp CTGAGATCCTCTCTGGGGTACTGGATTGGCTCTATCTaGTGGACAGTGGGGTTCCGGGCCATGCAGCGGAGA +
Preference number: 6 (lower is better)
Translates to: LRSSLGYWIGSI*WTVGFRAMQRR
Trigger: TCTCCGCTGCATGGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAGAGGATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS CCA 72 bp TGGACAGGGAGGGAGCTTCTCTGGCTGACGGGGTTCTaGGCTGTGCAGATGTATGGCAGGTCTGGGTCACAT +
Preference number: 6 (lower is better)
Translates to: WTGRELLWLTGF*AVQMYGRSGSH
Trigger: ATGTGACCCAGACCTGCCATACATCTGCACAGCCCAGAACCCCGTCAGCCAGAGAAGCTCCCTCCCTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS CCA 72 bp CTGGAGGCTCCTGGATCTGTACAGAACTGCCCAACATaGACAGGGAGGGAGCTTCTCTGGCTGACGGGGTTC +
Preference number: 6 (lower is better)
Translates to: LEAPGSVQNCPT*TGRELLWLTGF
Trigger: GAACCCCGTCAGCCAGAGAAGCTCCCTCCCTGTCCATGTTGGGCAGTTCTGTACAGATCCAGGAGCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS CCA 72 bp AAACAACCAGACAACCTTCTCTGTGTCCCGGCAGGCTaGGAGTGCAAGTGGCAGGGTGACTGGCTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: KQPDNLLCVPAG*ECKWQGDWLSQ
Trigger: CTGGGAGAGCCAGTCACCCTGCCACTTGCACTCCCAGCCTGCCGGGACACAGAGAAGGTTGTCTGGTTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS CCA 72 bp CTCTGGGGTACTGGATTGGCTCTATCTGCTGGACAGTaGGGTTCCGGGCCATGCAGCGGAGAGATGTTTCCC +
Preference number: 6 (lower is better)
Translates to: LWGTGLALSAGQ*GSGPCSGEMFP
Trigger: GGGAAACATCTCTCCGCTGCATGGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS CCA 72 bp TCCCAGGTGGCTGAGATCCTCTCTGGGGTACTGGATTaGCTCTATCTGCTGGACAGTGGGGTTCCGGGCCAT +
Preference number: 6 (lower is better)
Translates to: SQVAEILSGVLD*LYLLDSGVPGH
Trigger: ATGGCCCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS CCA 72 bp CACAGTCCCAGGTGGCTGAGATCCTCTCTGGGGTACTaGATTGGCTCTATCTGCTGGACAGTGGGGTTCCGG +
Preference number: 6 (lower is better)
Translates to: HSPRWLRSSLGY*IGSICWTVGFR
Trigger: CCGGAACCCCACTGTCCAGCAGATAGAGCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCTGGGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS CAA 72 bp CACTCAGTGCAGAAGGACCGGGGCAAGCACCTAAAGTaGGGTGGTGGAGGCCTAACTGGCAGCCTAGAGCCA +
Preference number: 6 (lower is better)
Translates to: HSVQKDRGKHLK*GGGGLTGSLEP
Trigger: TGGCTCTAGGCTGCCAGTTAGGCCTCCACCACCCAACTTTAGGTGCTTGCCCCGGTCCTTCTGCACTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 90 bp GTTGGGTGGTGGAGGCCTAACTGGCAGCCTAGAGCCAGGGGCACTTaGGCGGGTAGACTTGTCCAGCAGCTAGTCATGAGTTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: VGWWRPNWQPRARGT*AGRLVQQLVMSLPP
Trigger: AGGAGGCAAACTCATGACTAGCTGCTGGACAAGTCTACCCGCCAAAGTGCCCCTGGCTCTAGGCTGCCAGTTAGGCCTCCACCACCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS TCA 72 bp CAACAGCTTCCTTCTGCAGCGGGGTCCATGTGTACATaGCAGTGTTTCCCCCGTCCTCCACGGAGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: QQLPSAAGSMCT*QCFPRPPRSRS
Trigger: TGACCTGCTCCGTGGAGGACGGGGGAAACACTGTCATGTACACATGGACCCCGCTGCAGAAGGAAGCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS TCA 72 bp TGTGCACCTCAGGCCTGTCCTCATCCTCCTCAGTTGTaGGGTTGCTGTCAGAGCTGCTGTCTGAGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: CAPQACPHPPQL*GCCQSCCLRWV
Trigger: CACCCACCTCAGACAGCAGCTCTGACAGCAACCTCACAACTGAGGAGGATGAGGACAGGCCTGAGGTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS TCA 72 bp TGGCCCTCAGGGGCTGGGTCATGTCCAGCGCCCTCCTaGGTGACCTGGTCAAATACCTCATATCTTCCACTG +
Preference number: 6 (lower is better)
Translates to: WPSGAGSCPAPS*VTWSNTSYLPL
Trigger: CAGTGGAAGATATGAGGTATTTGACCAGGTCACTCAGGAGGGCGCTGGACATGACCCAGCCCCTGAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CCA 72 bp GCAGGCCTGAGGGGAGTGTCCAGCTTCTCATATCCTTaGGAGAGCACAGAGTATAGCGTGTGGCCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: AGLRGVSSFSYP*ESTEYSVWPAV
Trigger: CACAGCTGGCCACACGCTATACTCTGTGCTCTCCCAAGGATATGAGAAGCTGGACACTCCCCTCAGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS CAA 72 bp GAGTCACGGAACCCCCTAGGATCCCTGACACCACTGTaGGGGCTGAGTCCTTTCCAGAGGCTCTTAGTCCCA +
Preference number: 6 (lower is better)
Translates to: ESRNPLGSLTPL*GLSPFQRLLVP
Trigger: TGGGACTAAGAGCCTCTGGAAAGGACTCAGCCCCAACAGTGGTGTCAGGGATCCTAGGGGGTTCCGTGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000368039.2
ENST00000392203.8
CDS CAA 72 bp TGGAGGCCTAACTGGCAGCCTAGAGCCAGGGGCACTTaGGCGGGTAGACTTGTCCAGCAGCTAGTCATGAGT +
Preference number: 6 (lower is better)
Translates to: WRPNWQPRARGT*AGRLVQQLVMS
Trigger: ACTCATGACTAGCTGCTGGACAAGTCTACCCGCCAAAGTGCCCCTGGCTCTAGGCTGCCAGTTAGGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 72 bp GGAGCCTCCATTGGACTCAGAAGCATGGGGTTCCCTTaGGGTCCAGCTGTACAGAACACTTTTCTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: GASIGLRSMGFP*GPAVQNTFLCP
Trigger: GGGGCAGAGAAAAGTGTTCTGTACAGCTGGACCCCAAGGGAACCCCATGCTTCTGAGTCCAATGGAGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
ENST00000480837.5
CDS CCA 72 bp TTCTCATATCCTTGGGAGAGCACAGAGTATAGCGTGTaGCCAGCTGTGGGTTCTGGTGTATCCGCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: FSYPWESTEYSV*PAVGSGVSAGA
Trigger: GGCCCCAGCGGATACACCAGAACCCACAGCTGGCCACACGCTATACTCTGTGCTCTCCCAAGGATATGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263285.11
ENST00000392203.8
CDS TCA 72 bp CACAGAAGGACAGTAGCTGCCACAGTCCCAGGTGGCTaGGATCCTCTCTGGGGTACTGGATTGGCTCTATCT +
Preference number: 6 (lower is better)
Translates to: HRRTVAATVPGG*DPLWGTGLALS
Trigger: AGATAGAGCCAATCCAGTACCCCAGAGAGGATCTCAGCCACCTGGGACTGTGGCAGCTACTGTCCTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474998.1
CDS CCA 72 bp CTGGGCTGTGCAGATGTATGGCAGGTCTGGGTCACATaGTGTTCGGGAGACGGTAAGAATGGAGCCTCCATT +
Preference number: 6 (lower is better)
Translates to: LGCADVWQVWVT*CSGDGKNGASI
Trigger: AATGGAGGCTCCATTCTTACCGTCTCCCGAACACCATGTGACCCAGACCTGCCATACATCTGCACAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS CAA 72 bp GAAGTTCTCAGACACCTTCACAGACTTCATGGTGACTaGGGGCTCCTGCAGCTGCTCTGCAGGGACAACAGC +
Preference number: 6 (lower is better)
Translates to: EVLRHLHRLHGD*GLLQLLCRDNS
Trigger: GCTGTTGTCCCTGCAGAGCAGCTGCAGGAGCCCCAAGTCACCATGAAGTCTGTGAAGGTGTCTGAGAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471816.1
ENST00000479663.2
CDS GCA 72 bp AGGTGTGATTCCCCTTGGGACACAACAGCTTCCTTCTaGAGCGGGGTCCATGTGTACATGACAGTGTTTCCC +
Preference number: 6 (lower is better)
Translates to: RCDSPWDTTASF*SGVHVYMTVFP
Trigger: GGGAAACACTGTCATGTACACATGGACCCCGCTGCAGAAGGAAGCTGTTGTGTCCCAAGGGGAATCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS GCA 72 bp AGGAGAAAGCTTTCAGAGAAGGAATCTGGTGATGGGTaGCCTGCCCAGAGACTCACGGTAGATGAGCAGGGT +
Preference number: 6 (lower is better)
Translates to: RRKLSEKESGDG*PAQRLTVDEQG
Trigger: ACCCTGCTCATCTACCGTGAGTCTCTGGGCAGGGCACCCATCACCAGATTCCTTCTCTGAAAGCTTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 72 bp AAGTTCTCAGACACCTTCACAGACTTCATGGTGACTTaGGGCTCCTGCAGCTGCTCTGCAGGGACAACAGCA +
Preference number: 6 (lower is better)
Translates to: KFSDTFTDFMVT*GSCSCSAGTTA
Trigger: TGCTGTTGTCCCTGCAGAGCAGCTGCAGGAGCCCCAAGTCACCATGAAGTCTGTGAAGGTGTCTGAGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471816.1
ENST00000479663.2
CDS CCA 72 bp TCGAGCGATTTTCCTGCCTCAGCCTCTAGAGTAGCTTaGATTACAGGCGCCCACCACCGAACCCAGCTAATT +
Preference number: 6 (lower is better)
Translates to: SSDFPASASRVA*ITGAHHRTQLI
Trigger: AATTAGCTGGGTTCGGTGGTGGGCGCCTGTAATCCAAGCTACTCTAGAGGCTGAGGCAGGAAAATCGCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 90 bp GTTACAGGAGAAGTTCTCAGACACCTTCACAGACTTCATGGTGACTaGGGGCTCCTGCAGCTGCTCTGCAGGGACAACAGCATGGGAAGA +
Preference number: 6 (lower is better)
Translates to: VTGEVLRHLHRLHGD*GLLQLLCRDNSMGR
Trigger: TCTTCCCATGCTGTTGTCCCTGCAGAGCAGCTGCAGGAGCCCCAAGTCACCATGAAGTCTGTGAAGGTGTCTGAGAACTTCTCCTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471816.1
ENST00000479663.2
CDS TCA 72 bp AGCCAAGGAGAGAGGCCGCAGAAGAAACCAAGCCGCTaGTACCTTCATTGGCCTCCAGAATTGTGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: SQGERPQKKPSR*YLHWPPELCSG
Trigger: TCCAGAACACAATTCTGGAGGCCAATGAAGGTATCAGCGGCTTGGTTTCTTCTGCGGCCTCTCTCCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS TCA 72 bp GAAGATGCTCAGATCCTTTTGCCAGCAGGAAAGCGCTaGGAGAAGAAGGGAGTGACAATAGGGGAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: EDAQILLPAGKR*EKKGVTIGELG
Trigger: CCCCAACTCCCCTATTGTCACTCCCTTCTTCTCTCAGCGCTTTCCTGCTGGCAAAAGGATCTGAGCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 72 bp ACGGTAAGAATGGAGCCTCCATTGGACTCAGAAGCATaGGGTTCCCTTGGGGTCCAGCTGTACAGAACACTT +
Preference number: 6 (lower is better)
Translates to: TVRMEPPLDSEA*GSLGVQLYRTL
Trigger: AAGTGTTCTGTACAGCTGGACCCCAAGGGAACCCCATGCTTCTGAGTCCAATGGAGGCTCCATTCTTACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
ENST00000480837.5
CDS CCA 72 bp CTCTCAGGTCCTGAACAGATGTTCTCAGAAAGAAACTaGTGGGAACTCCTGCTGACAGGGTTGCTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LSGPEQMFSERN*WELLLTGLLAV
Trigger: CACAGCCAGCAACCCTGTCAGCAGGAGTTCCCACCAGTTTCTTTCTGAGAACATCTGTTCAGGACCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS CCA 72 bp GTTCTCTCCAACCACAGACTCAACTTCCGTGACATATaGAGTGACGGGATCATAGTCTGCTTGGCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: VLSNHRLNFRDI*SDGIIVCLALR
Trigger: CCTGAGGGCCAAGCAGACTATGATCCCGTCACTCCATATGTCACGGAAGTTGAGTCTGTGGTTGGAGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CCA 72 bp AGACAAAGGAATGACTGTGGGGGCACAGTGAAAAGGTaGCCAACTACAAGCCGAAGAGAGAGGTCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: RQRNDCGGTVKR*PTTSRRERSQE
Trigger: TTCCTGGGACCTCTCTCTTCGGCTTGTAGTTGGCCACCTTTTCACTGTGCCCCCACAGTCATTCCTTTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 72 bp GAAGTTCTCAGACACCTTCACAGACTTCATGGTGACTaGGGGCTCCTGCAGCTGCTCATAGACGAACAGGGT +
Preference number: 6 (lower is better)
Translates to: EVLRHLHRLHGD*GLLQLLIDEQG
Trigger: ACCCTGTTCGTCTATGAGCAGCTGCAGGAGCCCCAAGTCACCATGAAGTCTGTGAAGGTGTCTGAGAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000480837.5
CDS CAA 90 bp CTTCTCCTACCTCTACCTCACCCTTATTGTCCATGGCATCTCAGATaGACTTTGGTTTGGCCAGGTTTGGGGGTGGGAATAGCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: LLLPLPHPYCPWHLR*TLVWPGLGVGIAGG
Trigger: ACCACCAGCTATTCCCACCCCCAAACCTGGCCAAACCAAAGTCAATCTGAGATGCCATGGACAATAAGGGTGAGGTAGAGGTAGGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS TCA 72 bp AGGAGAAGTTCTCAGACACCTTCACAGACTTCATGGTaGCTTGGGGCTCCTGCAGCTGCTCATAGACGAACA +
Preference number: 6 (lower is better)
Translates to: RRSSQTPSQTSW*LGAPAAAHRRT
Trigger: TGTTCGTCTATGAGCAGCTGCAGGAGCCCCAAGTCACCATGAAGTCTGTGAAGGTGTCTGAGAACTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000480837.5
CDS TCA 72 bp CTGACAGGGTTGCTGGCTGTGCATGTGAGGTTGGGGTaGTTTTCACTGCTTCTCCATGAGACATTGAGGTGT +
Preference number: 6 (lower is better)
Translates to: LTGLLAVHVRLG*FSLLLHETLRC
Trigger: ACACCTCAATGTCTCATGGAGAAGCAGTGAAAATCACCCCAACCTCACATGCACAGCCAGCAACCCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS TCA 72 bp CTGAACACCGTCCTTTTCGCTTCCAAATGCACCAGCTaGAGATCCCAACGCACAGAAGGCAAACCATCAGGA +
Preference number: 6 (lower is better)
Translates to: LNTVLFASKCTS*RSQRTEGKPSG
Trigger: TCCTGATGGTTTGCCTTCTGTGCGTTGGGATCTTCAGCTGGTGCATTTGGAAGCGAAAAGGACGGTGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS TCA 72 bp CACCTGAGGTTTCCGTATGGAGCAGTAGATTGTGGCTaGGCTCTCTTCCTTCTGAGAAACTGGGGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: HLRFPYGAVDCG*ALFLLRNWGLS
Trigger: GGAAAGACCCCAGTTTCTCAGAAGGAAGAGAGCTCAGCCACAATCTACTGCTCCATACGGAAACCTCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS TCA 72 bp GACAACACAGACAAAGGAATGACTGTGGGGGCACAGTaGAAAGGTGGCCAACTACAAGCCGAAGAGAGAGGT +
Preference number: 6 (lower is better)
Translates to: DNTDKGMTVGAQ*KGGQLQAEERG
Trigger: ACCTCTCTCTTCGGCTTGTAGTTGGCCACCTTTTCACTGTGCCCCCACAGTCATTCCTTTGTCTGTGTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS GCA 72 bp TGGTCAAATACCTCATATCTTCCACTGATGGGCTTGTaGACCTCAGGCCTGTCCTCATCCTCCTCAGTTGTG +
Preference number: 6 (lower is better)
Translates to: WSNTSYLPLMGL*TSGLSSSSSVV
Trigger: CACAACTGAGGAGGATGAGGACAGGCCTGAGGTGCACAAGCCCATCAGTGGAAGATATGAGGTATTTGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CAA 72 bp ACCTGGTCAAATACCTCATATCTTCCACTGATGGGCTaGTGCACCTCAGGCCTGTCCTCATCCTCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: TWSNTSYLPLMG*CTSGLSSSSSV
Trigger: AACTGAGGAGGATGAGGACAGGCCTGAGGTGCACAAGCCCATCAGTGGAAGATATGAGGTATTTGACCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
CDS CAA 72 bp CCCTTATTGTCCATGGCATCTCAGATTGACTTTGGTTaGGCCAGGTTTGGGGGTGGGAATAGCTGGTGGTAC +
Preference number: 6 (lower is better)
Translates to: PLLSMASQIDFG*ARFGGGNSWWY
Trigger: GTACCACCAGCTATTCCCACCCCCAAACCTGGCCAAACCAAAGTCAATCTGAGATGCCATGGACAATAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS CAA 90 bp GTGTCGGGAACTAAAGGAGCTTCTCCTACCTCTACCTCACCCTTATaGTCCATGGCATCTCAGATTGACTTTGGTTTGGCCAGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: VSGTKGASPTSTSPL*SMASQIDFGLARFG
Trigger: CCCAAACCTGGCCAAACCAAAGTCAATCTGAGATGCCATGGACAATAAGGGTGAGGTAGAGGTAGGAGAAGCTCCTTTAGTTCCCGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS GCA 72 bp AGGCCCAGGAGCCCAGTCATCTGTGTGACTCTTTGGTaGCACCATGATGATCTATTTTCAGAACTGAGACTG +
Preference number: 6 (lower is better)
Translates to: RPRSPVICVTLW*HHDDLFSELRL
Trigger: CAGTCTCAGTTCTGAAAATAGATCATCATGGTGGCACCAAAGAGTCACACAGATGACTGGGCTCCTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368037.9
ENST00000392203.8
ENST00000474998.1
CDS GCA 72 bp CAAGCCGAAGAGAGAGGTCCCAGGAAAAACCGAACCTaGCAACACCTTGAACTTGGATTTCTAGTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: QAEERGPRKNRT*QHLELGFLVSR
Trigger: TCTGGAGACTAGAAATCCAAGTTCAAGGTGTTGGCAGGTTCGGTTTTTCCTGGGACCTCTCTCTTCGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 72 bp AGACAATATAGACAGAGGGACACCCATGTGAAGACATaGAGAGAAAGTGGCCATGTGGGAGCCAAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: RQYRQRDTHVKT*RESGHVGAKER
Trigger: TCTCTCCTTGGCTCCCACATGGCCACTTTCTCTCCATGTCTTCACATGGGTGTCCCTCTGTCTATATTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 72 bp GAGGCCGCAGAAGAAACCAAGCCGCTGATACCTTCATaGGCCTCCAGAATTGTGTTCTGGAGAAATGTGGAA +
Preference number: 6 (lower is better)
Translates to: EAAEETKPLIPS*ASRIVFWRNVE
Trigger: TTCCACATTTCTCCAGAACACAATTCTGGAGGCCAATGAAGGTATCAGCGGCTTGGTTTCTTCTGCGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 72 bp CCTCTACCTCACCCTTATTGTCCATGGCATCTCAGATaGACTTTGGTTTGGCCAGGTTTGGGGGTGGGAATA +
Preference number: 6 (lower is better)
Translates to: PLPHPYCPWHLR*TLVWPGLGVGI
Trigger: TATTCCCACCCCCAAACCTGGCCAAACCAAAGTCAATCTGAGATGCCATGGACAATAAGGGTGAGGTAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS CAA 90 bp CCAAGGAGAGAGGCCGCAGAAGAAACCAAGCCGCTGATACCTTCATaGGCCTCCAGAATTGTGTTCTGGAGAAATGTGGAATACGTTTCT +
Preference number: 6 (lower is better)
Translates to: PRREAAEETKPLIPS*ASRIVFWRNVEYVS
Trigger: AGAAACGTATTCCACATTTCTCCAGAACACAATTCTGGAGGCCAATGAAGGTATCAGCGGCTTGGTTTCTTCTGCGGCCTCTCTCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 90 bp CTACCTCTACCTCACCCTTATTGTCCATGGCATCTCAGATTGACTTaGGTTTGGCCAGGTTTGGGGGTGGGAATAGCTGGTGGTACTAAT +
Preference number: 6 (lower is better)
Translates to: LPLPHPYCPWHLRLT*VWPGLGVGIAGGTN
Trigger: ATTAGTACCACCAGCTATTCCCACCCCCAAACCTGGCCAAACCAAAGTCAATCTGAGATGCCATGGACAATAAGGGTGAGGTAGAGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS TCA 72 bp AGAGAGGTCTGTAGAACAGAAGAGAATATTTGCAGCTaGCTCCTCTGTGGCTTACTGGAGAAAGGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: REVCRTEENICS*LLCGLLEKGPG
Trigger: TCCTGGGCCTTTCTCCAGTAAGCCACAGAGGAGTCAGCTGCAAATATTCTCTTCTGTTCTACAGACCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000368039.2
ENST00000392203.8
ENST00000471816.1
ENST00000474998.1
ENST00000480837.5
ENST00000485624.1
ENST00000490902.1
CDS TCA 72 bp CACTTTTCTCTGCCCCCTTCACGGAGCACATTAGAGTaGTGTTACAGGAGAAGTTCTCAGACACCTTCACAG +
Preference number: 6 (lower is better)
Translates to: HFSLPPSRSTLE*CYRRSSQTPSQ
Trigger: CTGTGAAGGTGTCTGAGAACTTCTCCTGTAACATCACTCTAATGTGCTCCGTGAAGGGGGCAGAGAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
ENST00000480837.5
CDS TCA 72 bp AAACGCTATGGAGTGGGGACCTCTGCTTCTAGAATTTaGGTTGCCCGTGTCTTTGGTCTGAATTTAGGATGC +
Preference number: 6 (lower is better)
Translates to: KRYGVGTSASRI*VARVFGLNLGC
Trigger: GCATCCTAAATTCAGACCAAAGACACGGGCAACTCAAATTCTAGAAGCAGAGGTCCCCACTCCATAGCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 72 bp AGCACTTTTGAAATTCTAGACCAAAACAGATGGGTTTaGGACCCAGACTCCACCAGGAATTCCATGAGCAGG +
Preference number: 6 (lower is better)
Translates to: STFEILDQNRWV*DPDSTRNSMSR
Trigger: CCTGCTCATGGAATTCCTGGTGGAGTCTGGGTCCCAAACCCATCTGTTTTGGTCTAGAATTTCAAAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485624.1
ENST00000490902.1
CDS CAA 72 bp ATAGGTAGGACTTTCAGGAATCTCAAGATCATTCTGTaGTGGTGGTGGCACCACCTGAGGTTTCCGTATGGA +
Preference number: 6 (lower is better)
Translates to: IGRTFRNLKIIL*WWWHHLRFPYG
Trigger: TCCATACGGAAACCTCAGGTGGTGCCACCACCACAACAGAATGATCTTGAGATTCCTGAAAGTCCTACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
CDS CAA 72 bp TTACTTCTCTCTCTCCCCGACCAGTGTAAGAACTCCTaGATGACAGGGCTGATTCCTGTGTCTGAACATCTA +
Preference number: 6 (lower is better)
Translates to: LLLSLPDQCKNS*MTGLIPVSEHL
Trigger: TAGATGTTCAGACACAGGAATCAGCCCTGTCATCAAGGAGTTCTTACACTGGTCGGGGAGAGAGAGAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 72 bp ACTAAAGGAGCTTCTCCTACCTCTACCTCACCCTTATaGTCCATGGCATCTCAGATTGACTTTGGTTTGGCC +
Preference number: 6 (lower is better)
Translates to: TKGASPTSTSPL*SMASQIDFGLA
Trigger: GGCCAAACCAAAGTCAATCTGAGATGCCATGGACAATAAGGGTGAGGTAGAGGTAGGAGAAGCTCCTTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS GCA 72 bp AGGATCCCTGGATTTAATGAGTGGATCTGCCGTTGCTaGTTCTTCCCTCTCTTTGCTAATGATGGATGTGTT +
Preference number: 6 (lower is better)
Translates to: RIPGFNEWICRC*FFPLFANDGCV
Trigger: AACACATCCATCATTAGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTCATTAAATCCAGGGATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS GCA 72 bp GTAAGGATCCCTGGATTTAATGAGTGGATCTGCCGTTaGTGCTTCTTCCCTCTCTTTGCTAATGATGGATGT +
Preference number: 6 (lower is better)
Translates to: VRIPGFNEWICR*CFFPLFANDGC
Trigger: ACATCCATCATTAGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTCATTAAATCCAGGGATCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS CAA 72 bp GAAGGCAAACCATCAGGAACAACCCAATCCAAAGCTTaGTGTTTCTCTCAGGTCCTGAACAGATGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: EGKPSGTTQSKA*CFSQVLNRCSQ
Trigger: CTGAGAACATCTGTTCAGGACCTGAGAGAAACACAAAGCTTTGGATTGGGTTGTTCCTGATGGTTTGCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263285.11
ENST00000368035.1
ENST00000368037.9
CDS CAA 90 bp CTGGATTTAATGAGTGGATCTGCCGTTGCTGCTTCTTCCCTCTCTTaGCTAATGATGGATGTGTTAAACAACCAGACAACCTTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: LDLMSGSAVAASSLS*LMMDVLNNQTTFSV
Trigger: CACAGAGAAGGTTGTCTGGTTGTTTAACACATCCATCATTAGCAAAGAGAGGGAAGAAGCAGCAACGGCAGATCCACTCATTAAATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263285.11
ENST00000368037.9
ENST00000392203.8
ENST00000471816.1
ENST00000479663.2
CDS TCA 72 bp AAGATTGTGGCTTGGCAATGTTTGCTAAAGAGGTTATaGGATTTGACCACCTCAGCAGAAATGCTGCCAGTC +
Preference number: 6 (lower is better)
Translates to: KIVAWQCLLKRL*DLTTSAEMLPV
Trigger: GACTGGCAGCATTTCTGCTGAGGTGGTCAAATCTCATAACCTCTTTAGCAAACATTGCCAAGCCACAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 90 bp CGAAAAACGAGAAAGTGTGTCTGGAGAGAACACAAAGATTGTGGCTaGGCAATGTTTGCTAAAGAGGTTATGAGATTTGACCACCTCAGC +
Preference number: 6 (lower is better)
Translates to: RKTRKCVWREHKDCG*AMFAKEVMRFDHLS
Trigger: GCTGAGGTGGTCAAATCTCATAACCTCTTTAGCAAACATTGCCAAGCCACAATCTTTGTGTTCTCTCCAGACACACTTTCTCGTTTTTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 90 bp AGGCCTATGAATGTTCAGGGTAAATGCTCCAACTTTTCTGAATGTTaGAGAACTCTCATAGCAGTGTCGGGAACTAAAGGAGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: RPMNVQGKCSNFSEC*RTLIAVSGTKGASP
Trigger: AGGAGAAGCTCCTTTAGTTCCCGACACTGCTATGAGAGTTCTCAAACATTCAGAAAAGTTGGAGCATTTACCCTGAACATTCATAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS TCA 72 bp GCAGGTTCACAACTGAAGAAGAATTTTGCCTCAGGGTaGATCATATCTCAAGTCTCACCCATACCTGATTTA +
Preference number: 6 (lower is better)
Translates to: AGSQLKKNFASG*IISQVSPIPDL
Trigger: TAAATCAGGTATGGGTGAGACTTGAGATATGATTCACCCTGAGGCAAAATTCTTCTTCAGTTGTGAACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS TCA 72 bp AGGCAGATAACTTCTCTGGTTTTGCAGGTTCACAACTaGAGAAGAATTTTGCCTCAGGGTGAATCATATCTC +
Preference number: 6 (lower is better)
Translates to: RQITSLVLQVHN*RRILPQGESYL
Trigger: GAGATATGATTCACCCTGAGGCAAAATTCTTCTTCAGTTGTGAACCTGCAAAACCAGAGAAGTTATCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS TCA 72 bp GGAATGGCAATGTCTATTCCATACCTGTTCCACCATTaGATTTTGGAGGCAGATAACTTCTCTGGTTTTGCA +
Preference number: 6 (lower is better)
Translates to: GMAMSIPYLFHH*ILEADNFSGFA
Trigger: TGCAAAACCAGAGAAGTTATCTGCCTCCAAAATTCAATGGTGGAACAGGTATGGAATAGACATTGCCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 72 bp CAATGTCTATTCCATACCTGTTCCACCATTGAATTTTaGAGGCAGATAACTTCTCTGGTTTTGCAGGTTCAC +
Preference number: 6 (lower is better)
Translates to: QCLFHTCSTIEF*RQITSLVLQVH
Trigger: GTGAACCTGCAAAACCAGAGAAGTTATCTGCCTCCAAAATTCAATGGTGGAACAGGTATGGAATAGACATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 72 bp CTTCATTGGCCTCCAGAATTGTGTTCTGGAGAAATGTaGAATACGTTTCTGTTGTTTAAGCTAGTCAGTCTG +
Preference number: 6 (lower is better)
Translates to: LHWPPELCSGEM*NTFLLFKLVSL
Trigger: CAGACTGACTAGCTTAAACAACAGAAACGTATTCCACATTTCTCCAGAACACAATTCTGGAGGCCAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CCA 72 bp CACCTATTCATATTGCGAAAAACGAGAAAGTGTGTCTaGAGAGAACACAAAGATTGTGGCTTGGCAATGTTT +
Preference number: 6 (lower is better)
Translates to: HLFILRKTRKCV*REHKDCGLAMF
Trigger: AAACATTGCCAAGCCACAATCTTTGTGTTCTCTCCAGACACACTTTCTCGTTTTTCGCAATATGAATAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 72 bp AATGTTCAGGGTAAATGCTCCAACTTTTCTGAATGTTaGAGAACTCTCATAGCAGTGTCGGGAACTAAAGGA +
Preference number: 6 (lower is better)
Translates to: NVQGKCSNFSEC*RTLIAVSGTKG
Trigger: TCCTTTAGTTCCCGACACTGCTATGAGAGTTCTCAAACATTCAGAAAAGTTGGAGCATTTACCCTGAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS CAA 90 bp AGGAAAGGGCATACTTGTTGTAAAGTGGCAAAGAACTCGGCCACGTaGTATTCTAGTGTTTTGTGGAAAGCAGAATGTTTAAGTGATAAA +
Preference number: 6 (lower is better)
Translates to: RKGHTCCKVAKNSAT*YSSVLWKAECLSDK
Trigger: TTTATCACTTAAACATTCTGCTTTCCACAAAACACTAGAATACAACGTGGCCGAGTTCTTTGCCACTTTACAACAAGTATGCCCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 72 bp CATACTTGTTGTAAAGTGGCAAAGAACTCGGCCACGTaGTATTCTAGTGTTTTGTGGAAAGCAGAATGTTTA +
Preference number: 6 (lower is better)
Translates to: HTCCKVAKNSAT*YSSVLWKAECL
Trigger: TAAACATTCTGCTTTCCACAAAACACTAGAATACAACGTGGCCGAGTTCTTTGCCACTTTACAACAAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS GCA 72 bp AATCTAGGTAGTAGGCCTATGAATGTTCAGGGTAAATaGTCCAACTTTTCTGAATGTTTGAGAACTCTCATA +
Preference number: 6 (lower is better)
Translates to: NLGSRPMNVQGK*SNFSECLRTLI
Trigger: TATGAGAGTTCTCAAACATTCAGAAAAGTTGGAGCATTTACCCTGAACATTCATAGGCCTACTACCTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485624.1
CDS CAA 90 bp GAACTTGGATTTCTAGTCTCCAGAATTGTGAGAAATAAATTTCTGTaGTGTAAGCCATCTATTCTGGGATATTCTGTTATGGCATCCCTA +
Preference number: 6 (lower is better)
Translates to: ELGFLVSRIVRNKFL*CKPSILGYSVMASL
Trigger: TAGGGATGCCATAACAGAATATCCCAGAATAGATGGCTTACACAACAGAAATTTATTTCTCACAATTCTGGAGACTAGAAATCCAAGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS TCA 72 bp TATTCCTGGAGGCAATTACTGTTATGGGTTTCTTGTTaGTCTTTCCAGAGGTATTCTAGATATAGACAGATA +
Preference number: 6 (lower is better)
Translates to: YSWRQLLLWVSC*SFQRYSRYRQI
Trigger: TATCTGTCTATATCTAGAATACCTCTGGAAAGATCAACAAGAAACCCATAACAGTAATTGCCTCCAGGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479663.2
CDS CAA 72 bp GAATTGTGTTCTGGAGAAATGTGGAATACGTTTCTGTaGTTTAAGCTAGTCAGTCTGCAGTATTTTGTTATG +
Preference number: 6 (lower is better)
Translates to: ELCSGEMWNTFL*FKLVSLQYFVM
Trigger: CATAACAAAATACTGCAGACTGACTAGCTTAAACAACAGAAACGTATTCCACATTTCTCCAGAACACAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479663.2