Pregenerated sensors for LY86 (Homo sapiens)
Ensembl gene IDs: ENSG00000112799Ensembl transcript IDs: ENST00000230568.5, ENST00000379953.6
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCATCAGCTGCTTCTCCTCCCACAGTAGGTTCAGTCAGAGGAGCTTaGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTGCTACAGGC | + |
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Preference number: 1 (lower is better) Translates to: SSAASPPTVGSVRGA*RSHEMQLAVIFATG Trigger: GCCTGTAGCAAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGTGGGAGGAGAAGCAGCTGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| 3UTR TCA 90 bp | GCTTTCTTTATTCTTGGTAACTGTGAGGAAGCACTCCTAAAAAGTTaGAAAGCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: AFFILGNCEEALLKS*KAGESGGRRPIREK Trigger: TTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGCTTTTCAACTTTTTAGGAGTGCTTCCTCACAGTTACCAAGAATAAAGAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| 3UTR CAA 90 bp | GTCATCAGCTGCTTCTCCTCCCACAGTAGGTTCAGTCAGAGGAGCTaGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTGCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: VISCFSSHSRFSQRS*EVPRDAAGCDFCYR Trigger: CCTGTAGCAAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGTGGGAGGAGAAGCAGCTGATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| 3UTR-3UTR CCA 90 bp | GACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGACTTTACATCTGTGGAGTCTaGGGATGTCTGGTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: DCLRTAKRLLRNRYIRGLYICGV*GCLVLG Trigger: TCCCAGGACCAGACATCCCCAGACTCCACAGATGTA...AAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| 3UTR-3UTR CCA 90 bp | CAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTTAAGGACTGCCAAGAGGCTAGCAGCTGCACTCTTTaGGGGCGCTTCTTTGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: QLEKKDGPSRLLKDCQEASSCTL*GRFFVE Trigger: CTCTACAAAGAAGCGCCCCCAAAGAGTGCAGCTGCT...AGCCTCTTGGCAGTCCTTAAGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| 3UTR-3UTR GCA 90 bp | CAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTTAAGGACTGCCAAGAGGCTACTAAAATTAGCAGCTaGACTCTTTGGGGGCGCTTC | + |
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Preference number: 2 (lower is better) Translates to: QLEKKDGPSRLLKDCQEATKISS*TLWGRF Trigger: GAAGCGCCCCCAAAGAGTGCAGCTGCTAATTTTAGT...AGCCTCTTGGCAGTCCTTAAGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| 3UTR CCA 72 bp | GCTTCTCCTCCCACAGTAGGTTCAGTCAGAGGAGCTTaGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: ASPPTVGSVRGA*RSHEMQLAVIF Trigger: AAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGTGGGAGGAGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| 3UTR-3UTR CAA 90 bp | GACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGACTTTTCAGTCAGAGGAGCTaGGAGGTCCCACGAGATGCA | + |
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Preference number: 3 (lower is better) Translates to: DCLRTAKRLLRNRYIRGLFSQRS*EVPRDA Trigger: TGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAA...AAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | ACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGGATGCAGGCTGTGTATaGACCCAGGGACCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TVGSVRGAWRSHEMQLAVDAGCV*TQGPGC Trigger: GCAGCCAGGTCCCTGGGTCCATACACAGCCTGCATC...CACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | CACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTAAGTTGAAAAGCAGGTaGGTCTGGTGGGAGGCGACC | + |
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Preference number: 4 (lower is better) Translates to: HSRFSQRSLEVPRDAAGCKLKSR*VWWEAT Trigger: GGTCGCCTCCCACCAGACTCACCTGCTTTTCAACTT...ACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | GCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGGGAAGAGAGTGGCTGTaGAACCCTTCATGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGESGGRRPIREKGWTLKGREWL*NPSWWG Trigger: CCCCCACCATGAAGGGTTTCACAGCCACTCTCTTCC...CTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | CACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTTACATCTGTGGAGTCTaGGGATGTCTGGTCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: HSRFSQRSLEVPRDAAGCYICGV*GCLVLG Trigger: TCCCAGGACCAGACATCCCCAGACTCCACAGATGTA...ACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | GAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTGGAAGAGAGTGGCTGTaGAACCCTTCATGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: ESGGRRPIREKGWTLKTAGREWL*NPSWWG Trigger: CCCCCACCATGAAGGGTTTCACAGCCACTCTCTTCC...AGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| 3UTR CAA 72 bp | TGCTTCTCCTCCCACAGTAGGTTCAGTCAGAGGAGCTaGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: CFSSHSRFSQRS*EVPRDAAGCDF Trigger: AAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGTGGGAGGAGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR GCA 90 bp | ACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGACTAAAATTAGCAGCTaGACTCTTTGGGGGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TVGSVRGAWRSHEMQLAVTKISS*TLWGRF Trigger: GAAGCGCCCCCAAAGAGTGCAGCTGCTAATTTTAGT...CACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGACTTTACAGACCACGTGTGTaGGCCAGGCTTTCCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: DCLRTAKRLLRNRYIRGLYRPRV*ARLSHR Trigger: GCGGTGGGAAAGCCTGGCCCACACACGTGGTCTGTA...AAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTTGGCACAGGCCACGGTaGACCGTTTTTCAGTGTACA | + |
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Preference number: 4 (lower is better) Translates to: GSVRGAWRSHEMQLAVIFWHRPR*TVFQCT Trigger: TGTACACTGAAAAACGGTCCACCGTGGCCTGTGCCA...AAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGTGGCACAGGCCACGGTaGACCGTTTTTCAGTGTACA | + |
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Preference number: 4 (lower is better) Translates to: AGESGGRRPIREKGWTLKWHRPR*TVFQCT Trigger: TGTACACTGAAAAACGGTCCACCGTGGCCTGTGCCA...CTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | AAGCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCATCAGTCAGAGGAGCTTaGAGGTCCCACGAGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: KQVSLVGGDQLEKKDGPSSVRGA*RSHEMQ Trigger: CTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGA...TGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTTACATCTGTGGAGTCTaGGGATGTCTGGTCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GSVRGAWRSHEMQLAVIFYICGV*GCLVLG Trigger: TCCCAGGACCAGACATCCCCAGACTCCACAGATGTA...AAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | ACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGAAAACAGATGAGCCTTaGGACATGAGAGCTAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: TVGSVRGAWRSHEMQLAVKTDEP*DMRARS Trigger: TGACCTAGCTCTCATGTCTCAAGGCTCATCTGTTTT...CACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | CAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTTAAGGACTGCCAAGAGGCTTACAGACCACGTGTGTaGGCCAGGCTTTCCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: QLEKKDGPSRLLKDCQEAYRPRV*ARLSHR Trigger: GCGGTGGGAAAGCCTGGCCCACACACGTGGTCTGTA...AGCCTCTTGGCAGTCCTTAAGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | ACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGGAGCCGCCTCACAGATaGGATAGGAGAAATTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: TVGSVRGAWRSHEMQLAVEPPHR*DRRNSK Trigger: TTTTGAATTTCTCCTATCCCATCTGTGAGGCGGCTC...CACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | AAGCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGCAGCTGCACTCTTTaGGGGCGCTTCTTTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: KQVSLVGGDQLEKKDGPSSSCTL*GRFFVE Trigger: CTCTACAAAGAAGCGCCCCCAAAGAGTGCAGCTGCT...TGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | CACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTATGAGCCTTGAGACATaGGAGCTAGGTCAAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: HSRFSQRSLEVPRDAAGCMSLET*ELGQEK Trigger: TTTTTCTTGACCTAGCTCTCATGTCTCAAGGCTCAT...ACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | ACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGGAAATTCAAAACAGATaGGCCTTGAGACATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: TVGSVRGAWRSHEMQLAVEIQNR*ALRHES Trigger: GCTCTCATGTCTCAAGGCTCATCTGTTTTGAATTTC...CACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | CAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTTAAGGACTGCCAAGAGGCTGCCTCCACCCCCAGGTaGGGCTGTAAACTTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: QLEKKDGPSRLLKDCQEAASTPR*GCKLGK Trigger: TTTCCCAAGTTTACAGCCTCACCTGGGGGTGGAGGC...AGCCTCTTGGCAGTCCTTAAGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | CAAGACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGATCAGTCAGAGGAGCTTaGAGGTCCCACGAGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: QDCLRTAKRLLRNRYIRGSVRGA*RSHEMQ Trigger: CTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGA...TCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | GGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTGCACTCCTAAAAAGTTaGAAAGCAGGTGAGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GSVRGAWRSHEMQLAVIFALLKS*KAGESG Trigger: ACCAGACTCACCTGCTTTTCAACTTTTTAGGAGTGC...AAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGACTTCGCCTCCACTGCAGCTaGGAAAAATCAGAGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: DCLRTAKRLLRNRYIRGLRLHCS*EKSESR Trigger: TCTGGACTCTGATTTTTCCCAGCTGCAGTGGAGGCG...AAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | CAAGACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGACGCCTCCACTGCAGCTaGGAAAAATCAGAGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: QDCLRTAKRLLRNRYIRGRLHCS*EKSESR Trigger: TCTGGACTCTGATTTTTCCCAGCTGCAGTGGAGGCG...TCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGACTTAGCAGCTGCACTCTTTaGGGGCGCTTCTTTGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: DCLRTAKRLLRNRYIRGLSSCTL*GRFFVE Trigger: CTCTACAAAGAAGCGCCCCCAAAGAGTGCAGCTGCT...AAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTGCTACAACTTCATTACATCTGTaGAGTCTGGGGATGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VRGAWRSHEMQLAVIFATTSLHL*SLGMSG Trigger: ACCAGACATCCCCAGACTCCACAGATGTAATGAAGT...TGTAGCAAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | AGAGGCTCCTTAGAAACAGATACATTCGGGGACTTCATTACATCTGTGGAGTCTAAGTTGAAAAGCAGGTaGGTCTGGTGGGAGGCGACC | + |
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Preference number: 4 (lower is better) Translates to: RGSLETDTFGDFITSVESKLKSR*VWWEAT Trigger: GGTCGCCTCCCACCAGACTCACCTGCTTTTCAACTT...AGACTCCACAGATGTAATGAAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | AAGCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAGCACTCCTAAAAAGTTaGAAAGCAGGTGAGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KQVSLVGGDQLEKKDGPSALLKS*KAGESG Trigger: ACCAGACTCACCTGCTTTTCAACTTTTTAGGAGTGC...TGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | AAAGTTGAAAAGCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGTCTCTGCAGGCTCTTaGTGCAGGCTGTGTATGGAC | + |
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Preference number: 4 (lower is better) Translates to: KVEKQVSLVGGDQLEKKDVSAGS*CRLCMD Trigger: GTCCATACACAGCCTGCATCAAGAGCCTGCAGAGAC...ATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGCTTTTCAACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTTCTGGAATGAGGCTTTaGCCCTATTGTCACTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ESGGRRPIREKGWTLKTASGMRL*PYCHFP Trigger: AGGAAAGTGACAATAGGGCCAAAGCCTCATTCCAGA...AGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | GAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTATGAGCCTTGAGACATaGGAGCTAGGTCAAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: ESGGRRPIREKGWTLKTAMSLET*ELGQEK Trigger: TTTTTCTTGACCTAGCTCTCATGTCTCAAGGCTCAT...AGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | GAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTGAAATTCAAAACAGATaGGCCTTGAGACATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ESGGRRPIREKGWTLKTAEIQNR*ALRHES Trigger: GCTCTCATGTCTCAAGGCTCATCTGTTTTGAATTTC...AGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR GCA 90 bp | CAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTTAAGGACTGCCAAGAGGCTGCTGGCTGTGATTTTTaGTACAGGCCACAGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QLEKKDGPSRLLKDCQEAAGCDF*YRPQSG Trigger: TCCTGACTGTGGCCTGTAGCAAAAATCACAGCCAGC...AGCCTCTTGGCAGTCCTTAAGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR GCA 90 bp | GAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTAGTGAATTGTCCAGCTaGAGAACAGACCTTGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: ESGGRRPIREKGWTLKTASELSS*RTDLVL Trigger: CAAAACAAGGTCTGTTCTGCAGCTGGACAATTCACT...AGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGACTTGAACAGACCTTGTTTTaGGAGCTGCAGATGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: DCLRTAKRLLRNRYIRGLEQTLF*ELQMWS Trigger: AGACCACATCTGCAGCTCCCAAAACAAGGTCTGTTC...AAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | AAGCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAATGACATTTGGAATCTaGAATGAGGCTTTGGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: KQVSLVGGDQLEKKDGPSMTFGI*NEALAL Trigger: TAGGGCCAAAGCCTCATTCCAGATTCCAAATGTCAT...TGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR GCA 90 bp | AAAGTTGAAAAGCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGCTGGCTGTGATTTTTaGTACAGGCCACAGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KVEKQVSLVGGDQLEKKDAGCDF*YRPQSG Trigger: TCCTGACTGTGGCCTGTAGCAAAAATCACAGCCAGC...ATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGCTTTTCAACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR GCA 90 bp | AGAGGCTCCTTAGAAACAGATACATTCGGGGACTTCATTACATCTGTGGAGTCTATGGACCCTCAAGACTaGTTAAGGACTGCCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGSLETDTFGDFITSVESMDPQD*LRTAKR Trigger: CCTCTTGGCAGTCCTTAAGCAGTCTTGAGGGTCCAT...AGACTCCACAGATGTAATGAAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CCA 90 bp | GACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGACTTACTTCATTACATCTGTaGAGTCTGGGGATGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: DCLRTAKRLLRNRYIRGLTSLHL*SLGMSG Trigger: ACCAGACATCCCCAGACTCCACAGATGTAATGAAGT...AAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR TCA 90 bp | CAATTAGAGAAAAAGGATGGACCCTCAAGACTGCTTAAGGACTGCCAAGAGGCTATTTGGAATCTGGAATaGGGCTTTGGCCCTATTGTC | + |
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Preference number: 4 (lower is better) Translates to: QLEKKDGPSRLLKDCQEAIWNLE*GFGPIV Trigger: GACAATAGGGCCAAAGCCTCATTCCAGATTCCAAAT...AGCCTCTTGGCAGTCCTTAAGCAGTCTTGAGGGTCCATCCTTTTTCTCTAATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR GCA 90 bp | AGAGGCTCCTTAGAAACAGATACATTCGGGGACTTCATTACATCTGTGGAGTCTACTAAAATTAGCAGCTaGACTCTTTGGGGGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RGSLETDTFGDFITSVESTKISS*TLWGRF Trigger: GAAGCGCCCCCAAAGAGTGCAGCTGCTAATTTTAGT...AGACTCCACAGATGTAATGAAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS CCA 90 bp | TCTCCAGCCCCCGAGTCTCTGCAGGCTCTTGATGCAGGCTGTGTATaGACCCAGGGACCTGGCTGCAGCCAGCAGGCAGCAGTTGATAGC | + |
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Preference number: 5 (lower is better) Translates to: SPAPESLQALDAGCV*TQGPGCSQQAAVDS Trigger: GCTATCAACTGCTGCCTGCTGGCTGCAGCCAGGTCCCTGGGTCCATACACAGCCTGCATCAAGAGCCTGCAGAGACTCGGGGGCTGGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS CCA 90 bp | TCTGGTAGAGCACTTCCAAGCCGCTGTCGCTACAGACCACGTGTGTaGGCCAGGCTTTCCCACCGCCGCCTCCACTGCAGCTGGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SGRALPSRCRYRPRV*ARLSHRRLHCSWEK Trigger: TTTTTCCCAGCTGCAGTGGAGGCGGCGGTGGGAAAGCCTGGCCCACACACGTGGTCTGTAGCGACAGCGGCTTGGAAGTGCTCTACCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | ACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGCCACAGAAAGAAAACTaGGGCAGAGCCGCCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: TVGSVRGAWRSHEMQLAVPQKEN*GRAASQ Trigger: CTGTGAGGCGGCTCTGCCCAAGTTTTCTTTCTGTGG...CACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | ACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGTTCAGTCAGAGGAGCTaGGAGGTCCCACGAGATGCA | + |
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Preference number: 5 (lower is better) Translates to: TVGSVRGAWRSHEMQLAVFSQRS*EVPRDA Trigger: TGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAA...CACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | CACAGTAGGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGCTGCAGAACAGACCTaGTTTTGGGAGCTGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: HSRFSQRSLEVPRDAAGCAAEQT*FWELQM Trigger: CATCTGCAGCTCCCAAAACAAGGTCTGTTCTGCAGC...ACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACCTACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | GGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTCCACAGAAAGAAAACTaGGGCAGAGCCGCCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: GSVRGAWRSHEMQLAVIFPQKEN*GRAASQ Trigger: CTGTGAGGCGGCTCTGCCCAAGTTTTCTTTCTGTGG...AAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | GCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGTTCAGTCAGAGGAGCTaGGAGGTCCCACGAGATGCA | + |
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Preference number: 5 (lower is better) Translates to: AGESGGRRPIREKGWTLKFSQRS*EVPRDA Trigger: TGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAA...CTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS GCA 90 bp | CAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTaGTACAGGCCACAGTCAGGAGCACATGATAGTAGCATTGGCACA | + |
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Preference number: 5 (lower is better) Translates to: QRSLEVPRDAAGCDF*YRPQSGAHDSSIGT Trigger: TGTGCCAATGCTACTATCATGTGCTCCTGACTGTGGCCTGTAGCAAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | CAAGACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGAGCCAGCAGGCAGCAGTaGATAGCACGAGGGCTACAG | + |
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Preference number: 5 (lower is better) Translates to: QDCLRTAKRLLRNRYIRGASRQQ*IARGLQ Trigger: CTGTAGCCCTCGTGCTATCAACTGCTGCCTGCTGGC...TCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | GCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGAGTCTCTGCAGGCTCTaGATGCAGGCTGTGTATGGA | + |
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Preference number: 5 (lower is better) Translates to: AGESGGRRPIREKGWTLKSLCRL*MQAVYG Trigger: TCCATACACAGCCTGCATCAAGAGCCTGCAGAGACT...CTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | GCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATGGACCCTCAAGGGTGAGGCTGTAAACTaGGGAAAGACAAAGCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: AGESGGRRPIREKGWTLKGEAVN*GKTKRR Trigger: CCTGCGCTTTGTCTTTCCCAAGTTTACAGCCTCACC...CTTGAGGGTCCATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS TCA 90 bp | GGCTGCAGCCAGCAGGCAGCAGTTGATAGCACGAGGGCTACAGAATaGCATTTGGAATCTGGAATGAGGCTTTGGCCCTATTGTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: GCSQQAAVDSTRATE*HLESGMRLWPYCHF Trigger: AAAGTGACAATAGGGCCAAAGCCTCATTCCAGATTCCAAATGTCATTCTGTAGCCCTCGTGCTATCAACTGCTGCCTGCTGGCTGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | GACTGCTTAAGGACTGCCAAGAGGCTCCTTAGAAACAGATACATTCGGGGACTTCACATGATAGTAGCATaGGCACAGGCCACGGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: DCLRTAKRLLRNRYIRGLHMIVA*AQATVD Trigger: GTCCACCGTGGCCTGTGCCAATGCTACTATCATGTG...AAGTCCCCGAATGTATCTGTTTCTAAGGAGCCTCTTGGCAGTCCTTAAGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS TCA 90 bp | CAGTTGATAGCACGAGGGCTACAGAATGACATTTGGAATCTGGAATaGGGCTTTGGCCCTATTGTCACTTTCCTCTCCTCTGGCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: QLIARGLQNDIWNLE*GFGPIVTFLSSGFG Trigger: GCCAAAGCCAGAGGAGAGGAAAGTGACAATAGGGCCAAAGCCTCATTCCAGATTCCAAATGTCATTCTGTAGCCCTCGTGCTATCAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | AAAGTTGAAAAGCAGGTGAGTCTGGTGGGAGGCGACCAATTAGAGAAAAAGGATTCCTCTCCTCTGGCTTaGGCTCTGCTCTTAGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: KVEKQVSLVGGDQLEKKDSSPLA*ALLLGL Trigger: CAAACCTAAGAGCAGAGCCAAAGCCAGAGGAGAGGA...ATCCTTTTTCTCTAATTGGTCGCCTCCCACCAGACTCACCTGCTTTTCAACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | GGTTCAGTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTTCAAGAAAAAGCTCTTaGATGTCCTCTCTCAGAATA | + |
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Preference number: 5 (lower is better) Translates to: GSVRGAWRSHEMQLAVIFSRKSS*MSSLRI Trigger: TATTCTGAGAGAGGACATCAAAGAGCTTTTTCTTGA...AAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGACTGAACC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS-3UTR CAA 90 bp | GTCAGAGGAGCTTGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTGCTACATCAAGAAAAAGCTCTTaGATGTCCTCTCTCAGAATA | + |
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Preference number: 5 (lower is better) Translates to: VRGAWRSHEMQLAVIFATSRKSS*MSSLRI Trigger: TATTCTGAGAGAGGACATCAAAGAGCTTTTTCTTGA...TGTAGCAAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAAGCTCCTCTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS CCA 72 bp | GCACTTCCAAGCCGCTGTCGCTACAGACCACGTGTGTaGGCCAGGCTTTCCCACCGCCGCCTCCACTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ALPSRCRYRPRV*ARLSHRRLHCS Trigger: GCTGCAGTGGAGGCGGCGGTGGGAAAGCCTGGCCCACACACGTGGTCTGTAGCGACAGCGGCTTGGAAGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS CAA 72 bp | GCTACAGGCCACAGTCAGGAGCACATGATAGTAGCATaGGCACAGGCCACGGTGGACCGTTTTTCAGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: ATGHSQEHMIVA*AQATVDRFSVY Trigger: GTACACTGAAAAACGGTCCACCGTGGCCTGTGCCAATGCTACTATCATGTGCTCCTGACTGTGGCCTGTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS GCA 72 bp | TTGGAGGTCCCACGAGATGCAGCTGGCTGTGATTTTTaGTACAGGCCACAGTCAGGAGCACATGATAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LEVPRDAAGCDF*YRPQSGAHDSS Trigger: GCTACTATCATGTGCTCCTGACTGTGGCCTGTAGCAAAAATCACAGCCAGCTGCATCTCGTGGGACCTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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| CDS CAA 90 bp | GTGATTTTTGCTACAGGCCACAGTCAGGAGCACATGATAGTAGCATaGGCACAGGCCACGGTGGACCGTTTTTCAGTGTACAGTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VIFATGHSQEHMIVA*AQATVDRFSVYSSS Trigger: GCTGGAACTGTACACTGAAAAACGGTCCACCGTGGCCTGTGCCAATGCTACTATCATGTGCTCCTGACTGTGGCCTGTAGCAAAAATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000230568.5 ENST00000379953.6 |
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