Pregenerated sensors for LY6D (Homo sapiens)
Ensembl gene IDs: ENSG00000167656Ensembl transcript IDs: ENST00000301263.5, ENST00000518434.1, ENST00000518469.1, ENST00000518884.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCTCTGTGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGGAAGCCCTCAGCCTaGGGCTCCTGGCACCCCCGT | + |
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Preference number: 2 (lower is better) Translates to: PLWGLWGLLQVISIPCPPGKPSA*GSWHPR Trigger: ACGGGGGTGCCAGGAGCCCCAGGCTGAGGGCTTCCC...AGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCACAGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACTCCTGGCACCCCCGTTaGGGCTGGGGAAGAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: CGVCGACSKSSAFHAHLDSWHPR*GWGREV Trigger: CACCTCTCTTCCCCAGCCGCAACGGGGGTGCCAGGA...GTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACCACCCCCGTTGCGGCTaGGGAAGAGAGGTGTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: CGVCGACSKSSAFHAHLDHPRCG*GREVWN Trigger: ATTCCACACCTCTCTTCCCCAGCCGCAACGGGGGTG...GTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| 3UTR-3UTR CAA 90 bp | TGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACCTCTCCTGGCACCCCCGTaGCGGCTGGGGAAGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: WGLWGLLQVISIPCPPGPLLAPP*RLGKRG Trigger: ACCTCTCTTCCCCAGCCGCAACGGGGGTGCCAGGAG...AGGTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| 3UTR GCA 72 bp | GGGCTTCTGTCCTCCACCTTCCATGCAGCTGGGGGCTaGATCCTCTGTGGGGTGGCTTCATCCTCTGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GLLSSTFHAAGG*ILCGVASSSVG Trigger: CCCCACAGAGGATGAAGCCACCCCACAGAGGATGCAGCCCCCAGCTGCATGGAAGGTGGAGGACAGAAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| 3UTR CCA 72 bp | GCTCCAAGTCATCAGCATTCCATGCCCACCTGGACCTaGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: APSHQHSMPTWT*SQTFGEALSLG Trigger: CCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATGACTTGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| 3UTR GCA 72 bp | GGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATaGCCACCTGGACCTGGTCCCAGACTTTCGGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: GLWGLLQVISIP*PPGPGPRLSGK Trigger: CTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | GCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTCCTTGTGGGCGAGGGCGGTaGGGGTGGGTGCAGCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: AHLDLVPDFRGSPQPGAPCGRGR*GWVQRC Trigger: ACAACGCTGCACCCACCCGCACCGCCCTCGCCCACA...AGGAGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | CATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTTCAGCCTGGGGCTCCTaGCACCCCCGTTGCGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HAHLDLVPDFRGSPQPGASAWGS*HPRCGW Trigger: CCAGCCGCAACGGGGGTGCCAGGAGCCCCAGGCTGA...AGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR TCA 90 bp | CATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTGGCTGGGGGCTAAGATaGCGGCCAGGAGGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HAHLDLVPDFRGSPQPGAGWGLR*RPGGSG Trigger: CCCTGAGCCTCCTGGCCGTCATCTTAGCCCCCAGCC...AGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | GCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTCCTTCCTGGCACCCCCGTTaGGGCTGGGGAAGAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: AHLDLVPDFRGSPQPGAPSWHPR*GWGREV Trigger: CACCTCTCTTCCCCAGCCGCAACGGGGGTGCCAGGA...AGGAGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | CATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTCATGCAGCTGGGGGCTaGATCCTCTGTGGGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HAHLDLVPDFRGSPQPGAHAAGG*ILCGVA Trigger: AGCCACCCCACAGAGGATGCAGCCCCCAGCTGCATG...AGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | CATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTATGAGGGGCCTTCCCTaGGGGGAAGGTCACAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HAHLDLVPDFRGSPQPGAMRGLP*GEGHRL Trigger: CAGCCTGTGACCTTCCCCCCAGGGAAGGCCCCTCAT...AGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | GCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTCCTGTCATCAGCATTCCATaGCCACCTGGACCTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: AHLDLVPDFRGSPQPGAPVISIP*PPGPGP Trigger: GGGACCAGGTCCAGGTGGGCATGGAATGCTGATGAC...AGGAGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | GCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTCCTGGGGTCTGTGGGGCCTaGTCCAAGTCATCAGCATTC | + |
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Preference number: 4 (lower is better) Translates to: AHLDLVPDFRGSPQPGAPGVCGA*SKSSAF Trigger: GAATGCTGATGACTTGGAGCAGGCCCCACAGACCCC...AGGAGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | CATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCCGAGGGCGGTGCGGGTaGGTGCAGCGTTGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQHSMPTWTWSQTFGEALRGRCG*VQRCAA Trigger: AGCTGCACAACGCTGCACCCACCCGCACCGCCCTCG...GAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | AGTCATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCGGGAAGCCCTCAGCCTaGGGCTCCTGGCACCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SHQHSMPTWTWSQTFGEAGKPSA*GSWHPR Trigger: ACGGGGGTGCCAGGAGCCCCAGGCTGAGGGCTTCCC...GGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | TGTGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACGGCGGTGCGGGTGGGTaGAGCGTTGTGCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGVCGACSKSSAFHAHLDGGAGG*SVVQLL Trigger: GAGAAGCTGCACAACGCTGCACCCACCCGCACCGCC...GTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | AAGTCATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCAGGCTGAGGGCACTGTaGGCGAGGGCGGTGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KSSAFHAHLDLVPDFRGSRLRAL*ARAVRV Trigger: CACCCGCACCGCCCTCGCCCACAGTGCCCTCAGCCT...GCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATGACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | CCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTCCTGCATTCCATGCCCACCTaGACCTGGTCCCAGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: PTWTWSQTFGEALSLGLLHSMPT*TWSQTF Trigger: GAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATG...CAGGAGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | CAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCGGGTGTAGCTGGGTGTaGACGACTCCGCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QHSMPTWTWSQTFGEALSGCSWV*TTPHSP Trigger: AGGACTGTGCGGAGTCGTGCACACCCAGCTACACCC...GCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | TCCTCTGTGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCGAGCTGGTGCACACGTaGCAGCGCAGGGTAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGSVGPAPSHQHSMPTELVHT*QRRVRA Trigger: AGCCCTTACCCTGCGCTGCCACGTGTGCACCAGCTC...GGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCACAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | TCATCCTCTGTGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCAGTTGCTGGAGCTGGTaGACACGTGGCAGCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SSSVGSVGPAPSHQHSMPSCWSW*TRGSAG Trigger: CCCTGCGCTGCCACGTGTGCACCAGCTCCAGCAACT...GGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCACAGAGGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | CATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCTTGCACAGGTCCTCCTaGCAGCACTGGGTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HQHSMPTWTWSQTFGEALLHRSS*QHWVEL Trigger: CAGCTCCACCCAGTGCTGCCAGGAGGACCTGTGCAA...GAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | CATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCCACCCCCGTTGCGGCTaGGGAAGAGAGGTGTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: HQHSMPTWTWSQTFGEALHPRCG*GREVWN Trigger: ATTCCACACCTCTCTTCCCCAGCCGCAACGGGGGTG...GAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | TGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACCTCCTCTGTGGGGTCTGTaGGGCCTGCTCCAAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: WGLWGLLQVISIPCPPGPPLWGL*GLLQVI Trigger: GATGACTTGGAGCAGGCCCCACAGACCCCACAGAGG...AGGTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | CATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCCTGTGTTCGTGGTCTTaGAGAAGCGAGAGCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: HQHSMPTWTWSQTFGEALLCSWS*RSESWP Trigger: CGGCCAGCTCTCGCTTCTGCAAGACCACGAACACAG...GAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | TCCTCTGTGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCGCATCCTCTGTGGGGTaGCTTCATCCTCTGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SSVGSVGPAPSHQHSMPTASSVG*LHPLWG Trigger: ACCCCACAGAGGATGAAGCCACCCCACAGAGGATGC...GGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCACAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACCTGTGGGTGCAGCGTTGTaGAGCTTCTCATTGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: WGLWGLLQVISIPCPPGPVGAAL*SFSLHR Trigger: CCTGTGCAATGAGAAGCTGCACAACGCTGCACCCAC...AGGTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | AAGTCATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCTGCAGTTGCTGGAGCTaGTGCACACGTGGCAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: KSSAFHAHLDLVPDFRGSCSCWS*CTRGSA Trigger: TGCGCTGCCACGTGTGCACCAGCTCCAGCAACTGCA...GCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | TGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACCTAATGCTTGCAGTTGCTaGAGCTGGTGCACACGTGGC | + |
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Preference number: 4 (lower is better) Translates to: WGLWGLLQVISIPCPPGPNACSC*SWCTRG Trigger: GCCACGTGTGCACCAGCTCCAGCAACTGCAAGCATT...AGGTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | TGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACCTGCTCCACTGTGTTCGTaGTCTTGCAGAAGCGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: WGLWGLLQVISIPCPPGPAPLCS*SCRSES Trigger: GCTCTCGCTTCTGCAAGACCACGAACACAGTGGAGC...AGGTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACCTCAGAATGCTTGCAGTTaGTGGAGCTGGTGCACACGT | + |
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Preference number: 4 (lower is better) Translates to: WGLWGLLQVISIPCPPGPQNACS*WSWCTR Trigger: ACGTGTGCACCAGCTCCAGCAACTGCAAGCATTCTG...AGGTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | TCCTCTGTGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCAGACCACAGAATGCTTaGAGTTGCTGGAGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SSVGSVGPAPSHQHSMPTRPQNA*SCWSWC Trigger: GCACCAGCTCCAGCAACTGCAAGCATTCTGTGGTCT...GGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCACAGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR GCA 90 bp | AGTCATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCTGTGCAGCTTCTCATTaGACAGGTCCTCCTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SHQHSMPTWTWSQTFGEACAASH*TGPPGS Trigger: GCTGCCAGGAGGACCTGTGCAATGAGAAGCTGCACA...GGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | AAGTCATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCATGCCCACCTGGACCTaGTCCCAGACTTTCGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: KSSAFHAHLDLVPDFRGSMPTWT*SQTFGE Trigger: TTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCAT...GCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | CAAAACAGAAGGAGTGTGAAATCCGGGGATCCACAGGGCTTCTGTCCTCCACCTCTTGCAGGGTGTAGCTaGGTGTGCACGACTCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: QNRRSVKSGDPQGFCPPPLAGCS*VCTTPH Trigger: GTGCGGAGTCGTGCACACCCAGCTACACCCTGCAAG...AGGTGGAGGACAGAAGCCCTGTGGATCCCCGGATTTCACACTCCTTCTGTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CCA 90 bp | CGGCAACAAAACAGAAGGAGTGTGAAATCCGGGGATCCACAGGGCTTCTGTCCTGGGCTGCATCCTCTGTaGGGTGGCTTCATCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RQQNRRSVKSGDPQGFCPGLHPL*GGFILC Trigger: ACAGAGGATGAAGCCACCCCACAGAGGATGCAGCCC...AGGACAGAAGCCCTGTGGATCCCCGGATTTCACACTCCTTCTGTTTTGTTGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR TCA 90 bp | CGGCAACAAAACAGAAGGAGTGTGAAATCCGGGGATCCACAGGGCTTCTGTCCTAAAACAGAAGGAGTGTaGAATCCGGGGATCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: RQQNRRSVKSGDPQGFCPKTEGV*NPGIHR Trigger: CCTGTGGATCCCCGGATTTCACACTCCTTCTGTTTT...AGGACAGAAGCCCTGTGGATCCCCGGATTTCACACTCCTTCTGTTTTGTTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS CCA 90 bp | GCAGTTGCTGGAGCTGGTGCACACGTGGCAGCGCAGGGTAAGGGCTaGCGGGGAGGGAGTCCGGCTCAGCGGGCCCAACAGAGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: AVAGAGAHVAAQGKG*RGGSPAQRAQQRPP Trigger: AGGAGGCCTCTGTTGGGCCCGCTGAGCCGGACTCCCTCCCCGCCAGCCCTTACCCTGCGCTGCCACGTGTGCACCAGCTCCAGCAACTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000518434.1 ENST00000518469.1 ENST00000518884.1 |
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| CDS TCA 90 bp | GGCCTGACGGAGCTAAGGCCCCGGGGGCAGCCAGCTTGGCTGCTCTaGGCCTATGACAGGAAGGGCTTGGTGGCCTTTGGGCTGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GLTELRPRGQPAWLL*AYDRKGLVAFGLSW Trigger: CCAGGACAGCCCAAAGGCCACCAAGCCCTTCCTGTCATAGGCTCAGAGCAGCCAAGCTGGCTGCCCCCGGGGCCTTAGCTCCGTCAGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS GCA 90 bp | CTGAGGGCACTGTGGGCGAGGGCGGTGCGGGTGGGTGCAGCGTTGTaGAGCTTCTCATTGCACAGGTCCTCCTGGCAGCACTGGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LRALWARAVRVGAAL*SFSLHRSSWQHWVE Trigger: CTCCACCCAGTGCTGCCAGGAGGACCTGTGCAATGAGAAGCTGCACAACGCTGCACCCACCCGCACCGCCCTCGCCCACAGTGCCCTCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301263.5 ENST00000518434.1 ENST00000518469.1 |
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| CDS CCA 90 bp | GGGCAGACCACAGAATGCTTGCAGTTGCTGGAGCTGGTGCACACGTaGCAGCGCAGGGTAAGGGCTGGCGGGGAGGGAGTCCGGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GQTTECLQLLELVHT*QRRVRAGGEGVRLS Trigger: GCTGAGCCGGACTCCCTCCCCGCCAGCCCTTACCCTGCGCTGCCACGTGTGCACCAGCTCCAGCAACTGCAAGCATTCTGTGGTCTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000518434.1 ENST00000518469.1 ENST00000518884.1 |
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| CDS CCA 90 bp | GGCAGCCAGCTTGGCTGCTCTGAGCCTATGACAGGAAGGGCTTGGTaGCCTTTGGGCTGTCCTGGGCTGTGCTGGGGGAGACCTGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: GSQLGCSEPMTGRAW*PLGCPGLCWGRPGD Trigger: GTCCCCAGGTCTCCCCCAGCACAGCCCAGGACAGCCCAAAGGCCACCAAGCCCTTCCTGTCATAGGCTCAGAGCAGCCAAGCTGGCTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS CCA 90 bp | GGGCAGACCACAGAATGCTTGCAGTTGCTGGAGCTGGTGCACACGTaGCAGCGCAGGGTAAGGGCTGGCCCTGTAGCCACAGCCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GQTTECLQLLELVHT*QRRVRAGPVATARA Trigger: AGCCCTGGCTGTGGCTACAGGGCCAGCCCTTACCCTGCGCTGCCACGTGTGCACCAGCTCCAGCAACTGCAAGCATTCTGTGGTCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS TCA 90 bp | GACCGGGAGGGGCTGGTGGCAGGGACTAGATGGCCGCTCTCCCAGTaGGAAGCATCTCAAGACAACCCCCTGCTCCACTCTCTCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: DREGLVAGTRWPLSQ*EASQDNPLLHSLRV Trigger: GACCCTGAGAGAGTGGAGCAGGGGGTTGTCTTGAGATGCTTCTCACTGGGAGAGCGGCCATCTAGTCCCTGCCACCAGCCCCTCCCGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS CCA 90 bp | CCTGAGTGCAGCCTCAGGGGACATGTATTCCAGCCTGGGCCGGCTTaGAAGAGGTGTCCTGCCCTGCCCCTGTCTAGGGTGTGTTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PECSLRGHVFQPGPA*KRCPALPLSRVCCK Trigger: CTTGCAACACACCCTAGACAGGGGCAGGGCAGGACACCTCTTCCAAGCCGGCCCAGGCTGGAATACATGTCCCCTGAGGCTGCACTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS CCA 90 bp | CCCAGCCCCAGGGACACCTGGACAGATGCTACCCACCTGTGTTCGTaGTCTTGCAGAAGCGAGAGCTGGCCGGGCAGACCACAGAATGCT | + |
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Preference number: 5 (lower is better) Translates to: PSPRDTWTDATHLCS*SCRSESWPGRPQNA Trigger: AGCATTCTGTGGTCTGCCCGGCCAGCTCTCGCTTCTGCAAGACCACGAACACAGGTGGGTAGCATCTGTCCAGGTGTCCCTGGGGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS GCA 90 bp | CCGGCTTGGAAGAGGTGTCCTGCCCTGCCCCTGTCTAGGGTGTGTTaGAAGCCTTTCCTCCAAGGTCTCAGGGAGCTCTGCGACTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: PAWKRCPALPLSRVC*KPFLQGLRELCDCQ Trigger: TTGGCAGTCGCAGAGCTCCCTGAGACCTTGGAGGAAAGGCTTGCAACACACCCTAGACAGGGGCAGGGCAGGACACCTCTTCCAAGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS-3UTR CAA 90 bp | TGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCTGGACCTCGGGTGGGTGCAGCGTaGTGCAGCTTCTCATTGCAC | + |
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Preference number: 5 (lower is better) Translates to: WGLWGLLQVISIPCPPGPRVGAA*CSFSLH Trigger: GTGCAATGAGAAGCTGCACAACGCTGCACCCACCCG...AGGTCCAGGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS GCA 90 bp | CCCAGGGACACCTGGACAGATGCTACCCACCTGTGTTCGTGGTCTTaGAGAAGCGAGAGCTGGCCGGGCAGACCACAGAATGCTTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: PRDTWTDATHLCSWS*RSESWPGRPQNACS Trigger: ACTGCAAGCATTCTGTGGTCTGCCCGGCCAGCTCTCGCTTCTGCAAGACCACGAACACAGGTGGGTAGCATCTGTCCAGGTGTCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS-3UTR CAA 90 bp | CGGCAACAAAACAGAAGGAGTGTGAAATCCGGGGATCCACAGGGCTTCTGTCCTCTCCTGGCACCCCCGTaGCGGCTGGGGAAGAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: RQQNRRSVKSGDPQGFCPLLAPP*RLGKRG Trigger: ACCTCTCTTCCCCAGCCGCAACGGGGGTGCCAGGAG...AGGACAGAAGCCCTGTGGATCCCCGGATTTCACACTCCTTCTGTTTTGTTGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS GCA 90 bp | GACATGTATTCCAGCCTGGGCCGGCTTGGAAGAGGTGTCCTGCCCTaGCCCTGTCTAGGGTGTGTTGCAAGCCTTTCCTCCAAGGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: DMYSSLGRLGRGVLP*PCLGCVASLSSKVS Trigger: TGAGACCTTGGAGGAAAGGCTTGCAACACACCCTAGACAGGGGCAGGGCAGGACACCTCTTCCAAGCCGGCCCAGGCTGGAATACATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS-3UTR CAA 90 bp | TCCTCTGTGGGGTCTGTGGGGCCTGCTCCAAGTCATCAGCATTCCATGCCCACCCAGACCACAGAATGCTaGCAGTTGCTGGAGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SSVGSVGPAPSHQHSMPTQTTEC*QLLELV Trigger: CACCAGCTCCAGCAACTGCAAGCATTCTGTGGTCTG...GGTGGGCATGGAATGCTGATGACTTGGAGCAGGCCCCACAGACCCCACAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CAA 90 bp | AAGTCATCAGCATTCCATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCACTGTGTTCGTGGTCTaGCAGAAGCGAGAGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: KSSAFHAHLDLVPDFRGSTVFVV*QKRELA Trigger: GGCCAGCTCTCGCTTCTGCAAGACCACGAACACAGT...GCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATGGAATGCTGATGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS-3UTR CAA 90 bp | CAAAACAGAAGGAGTGTGAAATCCGGGGATCCACAGGGCTTCTGTCCTCCACCTGCTGCTGACCTGGCCTaGCAGGGTGTAGCTGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: QNRRSVKSGDPQGFCPPPAADLA*QGVAGC Trigger: ACACCCAGCTACACCCTGCAAGGCCAGGTCAGCAGC...AGGTGGAGGACAGAAGCCCTGTGGATCCCCGGATTTCACACTCCTTCTGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS GCA 90 bp | CTAGATGGCCGCTCTCCCAGTGAGAAGCATCTCAAGACAACCCCCTaGTCCACTCTCTCAGGGTCCGTGACTCCAGGAGTCAGTTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: LDGRSPSEKHLKTTP*STLSGSVTPGVSSK Trigger: CTTAGAACTGACTCCTGGAGTCACGGACCCTGAGAGAGTGGAGCAGGGGGTTGTCTTGAGATGCTTCTCACTGGGAGAGCGGCCATCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS-3UTR CAA 90 bp | CATGCCCACCTGGACCTGGTCCCAGACTTTCGGGGAAGCCCTCAGCCTGGGGCTTCTCCATGTAGAGATTaGAGTACAAAAATAAACGGC | + |
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Preference number: 5 (lower is better) Translates to: HAHLDLVPDFRGSPQPGASPCRD*STKING Trigger: GCCGTTTATTTTTGTACTCAAATCTCTACATGGAGA...AGCCCCAGGCTGAGGGCTTCCCCGAAAGTCTGGGACCAGGTCCAGGTGGGCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301263.5 |
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| CDS TCA 90 bp | AGAAGCATCTCAAGACAACCCCCTGCTCCACTCTCTCAGGGTCCGTaGCTCCAGGAGTCAGTTCTAAGATCCTCAGATTCTGAAACATTG | + |
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Preference number: 5 (lower is better) Translates to: RSISRQPPAPLSQGP*LQESVLRSSDSETL Trigger: CAATGTTTCAGAATCTGAGGATCTTAGAACTGACTCCTGGAGTCACGGACCCTGAGAGAGTGGAGCAGGGGGTTGTCTTGAGATGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS CCA 72 bp | GGAGCTGGTGCACACGTGGCAGCGCAGGGTAAGGGCTaGCGGGGAGGGAGTCCGGCTCAGCGGGCCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: GAGAHVAAQGKG*RGGSPAQRAQQ Trigger: CTGTTGGGCCCGCTGAGCCGGACTCCCTCCCCGCCAGCCCTTACCCTGCGCTGCCACGTGTGCACCAGCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000518434.1 ENST00000518469.1 ENST00000518884.1 |
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| CDS GCA 72 bp | GCAGAGACCCCTCCTGGACAGAGGCCCTGCTGCCCTTaGCCTAGGCCCCCAAACCCGGGCTCTGGGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: AETPPGQRPCCP*PRPPNPGSGSW Trigger: CCAGGACCCAGAGCCCGGGTTTGGGGGCCTAGGGCAAGGGCAGCAGGGCCTCTGTCCAGGAGGGGTCTCTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000518469.1 ENST00000518884.1 |
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| CDS GCA 72 bp | CTGTGGGCGAGGGCGGTGCGGGTGGGTGCAGCGTTGTaGAGCTTCTCATTGCACAGGTCCTCCTGGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LWARAVRVGAAL*SFSLHRSSWQH Trigger: GTGCTGCCAGGAGGACCTGTGCAATGAGAAGCTGCACAACGCTGCACCCACCCGCACCGCCCTCGCCCACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301263.5 ENST00000518434.1 ENST00000518469.1 |
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| CDS GCA 72 bp | GCTGAGGGCACTGTGGGCGAGGGCGGTGCGGGTGGGTaGAGCGTTGTGCAGCTTCTCATTGCACAGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: AEGTVGEGGAGG*SVVQLLIAQVL Trigger: GAGGACCTGTGCAATGAGAAGCTGCACAACGCTGCACCCACCCGCACCGCCCTCGCCCACAGTGCCCTCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301263.5 ENST00000518434.1 ENST00000518469.1 |
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| CDS CAA 72 bp | GCACTGTGGGCGAGGGCGGTGCGGGTGGGTGCAGCGTaGTGCAGCTTCTCATTGCACAGGTCCTCCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ALWARAVRVGAA*CSFSLHRSSWQ Trigger: CTGCCAGGAGGACCTGTGCAATGAGAAGCTGCACAACGCTGCACCCACCCGCACCGCCCTCGCCCACAGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301263.5 ENST00000518434.1 ENST00000518469.1 |
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| CDS TCA 72 bp | GAGCTAAGGCCCCGGGGGCAGCCAGCTTGGCTGCTCTaGGCCTATGACAGGAAGGGCTTGGTGGCCTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ELRPRGQPAWLL*AYDRKGLVAFG Trigger: CCCAAAGGCCACCAAGCCCTTCCTGTCATAGGCTCAGAGCAGCCAAGCTGGCTGCCCCCGGGGCCTTAGCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS GCA 72 bp | TCCAGCCTGGGCCGGCTTGGAAGAGGTGTCCTGCCCTaGCCCTGTCTAGGGTGTGTTGCAAGCCTTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSLGRLGRGVLP*PCLGCVASLSS Trigger: GGAGGAAAGGCTTGCAACACACCCTAGACAGGGGCAGGGCAGGACACCTCTTCCAAGCCGGCCCAGGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS CCA 72 bp | AGCCTCAGGGGACATGTATTCCAGCCTGGGCCGGCTTaGAAGAGGTGTCCTGCCCTGCCCCTGTCTAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SLRGHVFQPGPA*KRCPALPLSRV Trigger: CACCCTAGACAGGGGCAGGGCAGGACACCTCTTCCAAGCCGGCCCAGGCTGGAATACATGTCCCCTGAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000518469.1 ENST00000518884.1 |
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| CDS CAA 90 bp | TTGCAGAAGCGAGAGCTGGCCGGGCAGACCACAGAATGCTTGCAGTaGCTGGAGCTGGTGCACACGTGGCAGCGCAGGGTAAGGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LQKRELAGQTTECLQ*LELVHTWQRRVRAG Trigger: GCCAGCCCTTACCCTGCGCTGCCACGTGTGCACCAGCTCCAGCAACTGCAAGCATTCTGTGGTCTGCCCGGCCAGCTCTCGCTTCTGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000301263.5 ENST00000518434.1 ENST00000518469.1 ENST00000518884.1 |
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| CDS GCA 72 bp | AGAAGCGAGAGCTGGCCGGGCAGACCACAGAATGCTTaGAGTTGCTGGAGCTGGTGCACACGTGGCAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: RSESWPGRPQNA*SCWSWCTRGSA Trigger: TGCGCTGCCACGTGTGCACCAGCTCCAGCAACTGCAAGCATTCTGTGGTCTGCCCGGCCAGCTCTCGCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000301263.5 ENST00000518434.1 ENST00000518469.1 ENST00000518884.1 |
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| CDS TCA 72 bp | GGGCTGGTGGCAGGGACTAGATGGCCGCTCTCCCAGTaGGAAGCATCTCAAGACAACCCCCTGCTCCACTCT | + |
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Preference number: 6 (lower is better) Translates to: GLVAGTRWPLSQ*EASQDNPLLHS Trigger: AGAGTGGAGCAGGGGGTTGTCTTGAGATGCTTCTCACTGGGAGAGCGGCCATCTAGTCCCTGCCACCAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS CCA 72 bp | AGGGACACCTGGACAGATGCTACCCACCTGTGTTCGTaGTCTTGCAGAAGCGAGAGCTGGCCGGGCAGACCA | + |
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Preference number: 6 (lower is better) Translates to: RDTWTDATHLCS*SCRSESWPGRP Trigger: TGGTCTGCCCGGCCAGCTCTCGCTTCTGCAAGACCACGAACACAGGTGGGTAGCATCTGTCCAGGTGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS GCA 72 bp | GATTCCCCCTCAGAGGCTCCACTGTGTTCGTGGTCTTaGAGAAGCGAGAGCTGGCCGGGCAGACCACAGAAT | + |
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Preference number: 6 (lower is better) Translates to: DSPSEAPLCSWS*RSESWPGRPQN Trigger: ATTCTGTGGTCTGCCCGGCCAGCTCTCGCTTCTGCAAGACCACGAACACAGTGGAGCCTCTGAGGGGGAATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000301263.5 ENST00000518434.1 ENST00000518884.1 |
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| CDS GCA 72 bp | TGTTGCAAGCCTTTCCTCCAAGGTCTCAGGGAGCTCTaGGACTGCCAAGAGGACACTGGCTCTTGTCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: CCKPFLQGLREL*DCQEDTGSCPH Trigger: GTGGGGACAAGAGCCAGTGTCCTCTTGGCAGTCGCAGAGCTCCCTGAGACCTTGGAGGAAAGGCTTGCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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| CDS GCA 72 bp | ACCTGGACAGATGCTACCCACCTGTGTTCGTGGTCTTaGAGAAGCGAGAGCTGGCCGGGCAGACCACAGAAT | + |
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Preference number: 6 (lower is better) Translates to: TWTDATHLCSWS*RSESWPGRPQN Trigger: ATTCTGTGGTCTGCCCGGCCAGCTCTCGCTTCTGCAAGACCACGAACACAGGTGGGTAGCATCTGTCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518469.1 |
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